Ticket #20375: build.log

File build.log, 18.5 KB (added by mamoll (Mark Moll), 15 years ago)
Line 
1sudo port -dv build openmpi
2DEBUG: Found port in file:///Users/mmoll/src/macports/dports/science/openmpi
3DEBUG: Changing to port directory: /Users/mmoll/src/macports/dports/science/openmpi
4DEBUG: OS Platform: darwin
5DEBUG: OS Version: 9.7.0
6DEBUG: Mac OS X Version: 10.5
7DEBUG: System Arch: i386
8DEBUG: setting option os.universal_supported to yes
9DEBUG: org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
10DEBUG: org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
11DEBUG: adding the default universal variant
12DEBUG: Reading variant descriptions from /Users/mmoll/src/macports/dports/_resources/port1.0/variant_descriptions.conf
13DEBUG: Requested variant darwin is not provided by port openmpi.
14DEBUG: Requested variant i386 is not provided by port openmpi.
15DEBUG: Requested variant no_x11 is not provided by port openmpi.
16DEBUG: Requested variant system_x11 is not provided by port openmpi.
17DEBUG: Requested variant macosx is not provided by port openmpi.
18DEBUG: Requested variant quartz is not provided by port openmpi.
19DEBUG: Executing variant gcc43 provides gcc43
20Portfile changed since last build; discarding previous state.
21DEBUG: delete: /opt/local/var/macports/build/_Users_mmoll_src_macports_dports_science_openmpi/work
22--->  Computing dependencies for openmpi
23DEBUG: Searching for dependency: gcc43
24DEBUG: Found Dependency: receipt exists for gcc43
25
26DEBUG: Executing org.macports.main (openmpi)
27--->  Fetching openmpi
28DEBUG: Executing org.macports.fetch (openmpi)
29--->  Verifying checksum(s) for openmpi
30DEBUG: Executing org.macports.checksum (openmpi)
31--->  Checksumming openmpi-1.3.3.tar.bz2
32DEBUG: Correct (md5) checksum for openmpi-1.3.3.tar.bz2
33DEBUG: Correct (sha1) checksum for openmpi-1.3.3.tar.bz2
34DEBUG: Correct (rmd160) checksum for openmpi-1.3.3.tar.bz2
35DEBUG: setting option extract.cmd to /usr/bin/bzip2
36--->  Extracting openmpi
37DEBUG: Executing proc-pre-org.macports.extract-extract-0
38DEBUG: Executing org.macports.extract (openmpi)
39--->  Extracting openmpi-1.3.3.tar.bz2
40DEBUG: setting option extract.args to /opt/local/var/macports/distfiles/openmpi/openmpi-1.3.3.tar.bz2
41DEBUG: Environment: MACOSX_DEPLOYMENT_TARGET='10.5'
42DEBUG: Assembled command: 'cd "/opt/local/var/macports/build/_Users_mmoll_src_macports_dports_science_openmpi/work" && /usr/bin/bzip2 -dc /opt/local/var/macports/distfiles/openmpi/openmpi-1.3.3.tar.bz2 | /usr/bin/gnutar --no-same-owner -xf -'
43DEBUG: Executing org.macports.patch (openmpi)
44--->  Configuring openmpi
45DEBUG: Using compiler 'Mac OS X gcc 4.0'
46DEBUG: Executing org.macports.configure (openmpi)
47DEBUG: Environment: CFLAGS='-O2 -arch i386' CPPFLAGS='-I/opt/local/include' CXXFLAGS='-O2 -arch i386' MACOSX_DEPLOYMENT_TARGET='10.5' CPP='/usr/bin/cpp-4.0' CXX='/usr/bin/g++-4.0' F90FLAGS='-O2 -arch i386' LDFLAGS='-L/opt/local/lib -arch i386' FCFLAGS='-O2 -arch i386' OBJC='/usr/bin/gcc-4.0' INSTALL='/usr/bin/install -c' FC='/opt/local/bin/gfortran-mp-4.3' FFLAGS='-O2 -arch i386' OBJCFLAGS='-O2 -arch i386' F77='/opt/local/bin/gfortran-mp-4.3' CC='/usr/bin/gcc-4.0'
48DEBUG: Assembled command: 'cd "/opt/local/var/macports/build/_Users_mmoll_src_macports_dports_science_openmpi/work/build" && /opt/local/var/macports/build/_Users_mmoll_src_macports_dports_science_openmpi/work/openmpi-1.3.3/configure --prefix=/opt/local --with-xgrid --sysconfdir=/opt/local/etc/openmpi --includedir=/opt/local/include/openmpi --bindir=/opt/local/lib/openmpi/bin --mandir=/opt/local/share/man --enable-f77 --enable-f90'
49configure: WARNING: unrecognized options: --enable-f77, --enable-f90
50checking for a BSD-compatible install... /usr/bin/install -c
51checking whether build environment is sane... yes
52checking for a thread-safe mkdir -p... /opt/local/bin/gmkdir -p
53checking for gawk... no
54checking for mawk... no
55checking for nawk... no
56checking for awk... awk
57checking whether make sets $(MAKE)... yes
58checking how to create a ustar tar archive... gnutar
59
60============================================================================
61== Configuring Open MPI
62============================================================================
63
64*** Checking versions
65checking Open MPI version... 1.3.3
66checking Open MPI release date... Jul 14, 2009
67checking Open MPI Subversion repository version... r21666
68checking Open Run-Time Environment version... 1.3.3
69checking Open Run-Time Environment release date... Jul 14, 2009
70checking Open Run-Time Environment Subversion repository version... r21666
71checking Open Portable Access Layer version... 1.3.3
72checking Open Portable Access Layer release date... Jul 14, 2009
73checking Open Portable Access Layer Subversion repository version... r21666
74
75*** Initialization, setup
76configure: builddir: /opt/local/var/macports/build/_Users_mmoll_src_macports_dports_science_openmpi/work/build
77configure: srcdir: /opt/local/var/macports/build/_Users_mmoll_src_macports_dports_science_openmpi/work/openmpi-1.3.3
78configure: Detected VPATH build
79checking build system type... i386-apple-darwin9.7.0
80checking host system type... i386-apple-darwin9.7.0
81installing to directory "/opt/local"
82
83*** Configuration options
84checking whether to run code coverage... no
85checking whether to compile with branch probabilities... no
86checking whether to debug memory usage... no
87checking whether to profile memory usage... no
88checking if want developer-level compiler pickyness... no
89checking if want developer-level debugging code... no
90checking if want sparse process groups... no
91checking if want Fortran 77 bindings... yes
92checking if want Fortran 90 bindings... yes
93checking desired Fortran 90 bindings "size"... small
94checking whether to enable PMPI... yes
95checking if want C++ bindings... yes
96checking if want MPI::SEEK_SET support... yes
97checking if want to enable weak symbol support... yes
98checking if want run-time MPI parameter checking... runtime
99checking if want to install OMPI header files... no
100checking if want pretty-print stacktrace... yes
101checking if peruse support is required... no
102checking max supported array dimension in F90 MPI bindings... 4
103checking if pty support should be enabled... yes
104checking if user wants dlopen support... yes
105checking if heterogeneous support should be enabled... no
106checking if want trace file debugging... no
107checking if want full RTE support... yes
108checking if want fault tolerance... Disabled fault tolerance
109checking if want IPv6 support... yes (if underlying system supports it)
110checking if want orterun "--prefix" behavior to be enabled by default... no
111checking for package/brand string... Open MPI root@gort.cs.rice.edu Distribution
112checking for ident string... 1.3.3
113checking whether to add padding to the openib control header... no
114checking whether to use an alternative checksum algo for messages... no
115
116============================================================================
117== Compiler and preprocessor tests
118============================================================================
119
120*** C compiler and preprocessor
121checking for style of include used by make... GNU
122checking for gcc... /usr/bin/gcc-4.0
123checking for C compiler default output file name... a.out
124checking whether the C compiler works... yes
125checking whether we are cross compiling... no
126checking for suffix of executables...
127checking for suffix of object files... o
128checking whether we are using the GNU C compiler... yes
129checking whether /usr/bin/gcc-4.0 accepts -g... yes
130checking for /usr/bin/gcc-4.0 option to accept ISO C89... none needed
131checking dependency style of /usr/bin/gcc-4.0... gcc3
132checking whether /usr/bin/gcc-4.0 and cc understand -c and -o together... yes
133checking how to run the C preprocessor... /usr/bin/cpp-4.0
134checking for grep that handles long lines and -e... /usr/bin/grep
135checking for egrep... /usr/bin/grep -E
136checking for the C compiler vendor... gnu
137checking for ANSI C header files... yes
138checking if /usr/bin/gcc-4.0 supports -finline-functions... yes
139checking if /usr/bin/gcc-4.0 supports -fno-strict-aliasing... yes
140configure: WARNING:  -fno-strict-aliasing has been added to CFLAGS
141checking if /usr/bin/gcc-4.0 supports __builtin_expect... yes
142checking if /usr/bin/gcc-4.0 supports __builtin_prefetch... yes
143checking for C optimization flags... -DNDEBUG -O2 -arch i386 -finline-functions -fno-strict-aliasing
144checking for Interix environment... no
145checking for C ident string support... static const char
146checking for sys/types.h... yes
147checking for sys/stat.h... yes
148checking for stdlib.h... yes
149checking for string.h... yes
150checking for memory.h... yes
151checking for strings.h... yes
152checking for inttypes.h... yes
153checking for stdint.h... yes
154checking for unistd.h... yes
155checking for long long... yes
156checking for long double... yes
157checking for int8_t... yes
158checking for uint8_t... yes
159checking for int16_t... yes
160checking for uint16_t... yes
161checking for int32_t... yes
162checking for uint32_t... yes
163checking for int64_t... yes
164checking for uint64_t... yes
165checking for intptr_t... yes
166checking for uintptr_t... yes
167checking for mode_t... yes
168checking for ssize_t... yes
169checking for ptrdiff_t... yes
170checking size of char... 1
171checking size of short... 2
172checking size of int... 4
173checking size of long... 4
174checking size of long long... 8
175checking size of long double... 16
176checking size of float... 4
177checking size of double... 8
178checking size of void *... 4
179checking size of size_t... 4
180checking size of ssize_t... 4
181checking size of ptrdiff_t... 4
182checking alignment of char... 1
183checking alignment of short... 2
184checking alignment of wchar_t... 4
185checking alignment of int... 4
186checking alignment of long... 4
187checking alignment of long long... 4
188checking alignment of float... 4
189checking alignment of double... 4
190checking alignment of long double... 16
191checking alignment of void *... 4
192checking for C bool type... no
193checking for inline... __inline__
194checking for C/C++ restrict keyword... __restrict
195checking for weak symbol support... no
196checking for functional offsetof macro... yes
197
198*** C++ compiler and preprocessor
199checking whether we are using the GNU C++ compiler... yes
200checking whether /usr/bin/g++-4.0 accepts -g... yes
201checking dependency style of /usr/bin/g++-4.0... gcc3
202checking how to run the C++ preprocessor... /usr/bin/g++-4.0 -E
203checking for the C++ compiler vendor... gnu
204checking if C++ compiler works... yes
205checking if /usr/bin/g++-4.0 supports -finline-functions... yes
206configure: WARNING:  -finline-functions has been added to CXXFLAGS
207checking if want C++ exception handling... no
208checking if C and C++ are link compatible... yes
209checking for C++ template_repository_directory... not used
210checking for C++ compiler template parameters... none needed
211checking if /usr/bin/g++-4.0 supports __builtin_expect... yes
212checking if /usr/bin/g++-4.0 supports __builtin_prefetch... yes
213checking if /usr/bin/g++-4.0 supports const_cast<> properly... yes
214checking for C++ optimization flags... -DNDEBUG -O2 -arch i386 -finline-functions
215checking for C++ ident string support... static const char
216checking size of bool... 1
217checking alignment of bool... 1
218checking for __attribute__... yes
219checking for __attribute__(aligned)... yes
220checking for __attribute__(always_inline)... yes
221checking for __attribute__(cold)... no
222checking for __attribute__(const)... yes
223checking for __attribute__(deprecated)... yes
224checking for __attribute__(format)... yes
225checking for __attribute__(hot)... no
226checking for __attribute__(malloc)... yes
227checking for __attribute__(may_alias)... yes
228checking for __attribute__(no_instrument_function)... yes
229checking for __attribute__(nonnull)... yes
230checking for __attribute__(noreturn)... yes
231checking for __attribute__(packed)... yes
232checking for __attribute__(pure)... yes
233checking for __attribute__(sentinel)... yes
234checking for __attribute__(unused)... yes
235checking for __attribute__(visibility)... yes
236checking for __attribute__(warn_unused_result)... yes
237checking for __attribute__(weak_alias)... no
238
239*** Assembler
240checking dependency style of /usr/bin/gcc-4.0... gcc3
241checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -p
242checking the name lister (/usr/bin/nm -p) interface... BSD nm
243checking for fgrep... /usr/bin/grep -F
244checking if need to remove -g from CCASFLAGS... OS X Leopard - yes ( -DNDEBUG -O2 -arch i386 -finline-functions -fno-strict-aliasing)
245checking whether to enable smp locks... yes
246checking if .proc/endp is needed... no
247checking directive for setting text section... .text
248checking directive for exporting symbols... .globl
249checking for objdump... no
250checking if .note.GNU-stack is needed... no
251checking suffix for labels... :
252checking prefix for global symbol labels... _
253checking prefix for lsym labels... L
254checking prefix for function in .type...
255checking if .size is needed... no
256checking if .align directive takes logarithmic value... yes
257checking if /usr/bin/gcc-4.0 supports GCC inline assembly... yes
258checking if /usr/bin/gcc-4.0 supports DEC inline assembly... no
259checking if /usr/bin/gcc-4.0 supports XLC inline assembly... no
260checking if /usr/bin/g++-4.0 supports GCC inline assembly... yes
261checking if /usr/bin/g++-4.0 supports DEC inline assembly... no
262checking if /usr/bin/g++-4.0 supports XLC inline assembly... no
263checking for assembly format... default-.text-.globl-:-_-L--0-1-1-1-0
264checking for asssembly architecture... IA32
265checking for perl... perl
266checking for pre-built assembly file... yes (atomic-ia32-osx.s)
267checking for atomic assembly filename... atomic-ia32-osx.s
268
269*** Fortran 77 compiler
270checking whether we are using the GNU Fortran 77 compiler... no
271checking whether /opt/local/bin/gfortran-mp-4.3 accepts -g... yes
272checking if Fortran 77 compiler works... no
273**********************************************************************
274* It appears that your Fortran 77 compiler is unable to produce working
275* executables.  A simple test application failed to properly
276* execute.  Note that this is likely not a problem with Open MPI,
277* but a problem with the local compiler installation.  More
278* information (including exactly what command was given to the
279* compiler and what error resulted when the command was executed) is
280* available in the config.log file in this directory.
281**********************************************************************
282configure: error: Could not run a simple Fortran 77 program.  Aborting.
283Error: Target org.macports.configure returned: configure failure: shell command " cd "/opt/local/var/macports/build/_Users_mmoll_src_macports_dports_science_openmpi/work/build" && /opt/local/var/macports/build/_Users_mmoll_src_macports_dports_science_openmpi/work/openmpi-1.3.3/configure --prefix=/opt/local --with-xgrid --sysconfdir=/opt/local/etc/openmpi --includedir=/opt/local/include/openmpi --bindir=/opt/local/lib/openmpi/bin --mandir=/opt/local/share/man --enable-f77 --enable-f90 " returned error 1
284Command output: checking prefix for lsym labels... L
285checking prefix for function in .type...
286checking if .size is needed... no
287checking if .align directive takes logarithmic value... yes
288checking if /usr/bin/gcc-4.0 supports GCC inline assembly... yes
289checking if /usr/bin/gcc-4.0 supports DEC inline assembly... no
290checking if /usr/bin/gcc-4.0 supports XLC inline assembly... no
291checking if /usr/bin/g++-4.0 supports GCC inline assembly... yes
292checking if /usr/bin/g++-4.0 supports DEC inline assembly... no
293checking if /usr/bin/g++-4.0 supports XLC inline assembly... no
294checking for assembly format... default-.text-.globl-:-_-L--0-1-1-1-0
295checking for asssembly architecture... IA32
296checking for perl... perl
297checking for pre-built assembly file... yes (atomic-ia32-osx.s)
298checking for atomic assembly filename... atomic-ia32-osx.s
299
300*** Fortran 77 compiler
301checking whether we are using the GNU Fortran 77 compiler... no
302checking whether /opt/local/bin/gfortran-mp-4.3 accepts -g... yes
303checking if Fortran 77 compiler works... no
304**********************************************************************
305* It appears that your Fortran 77 compiler is unable to produce working
306* executables.  A simple test application failed to properly
307* execute.  Note that this is likely not a problem with Open MPI,
308* but a problem with the local compiler installation.  More
309* information (including exactly what command was given to the
310* compiler and what error resulted when the command was executed) is
311* available in the config.log file in this directory.
312**********************************************************************
313configure: error: Could not run a simple Fortran 77 program.  Aborting.
314
315DEBUG: Backtrace: configure failure: shell command " cd "/opt/local/var/macports/build/_Users_mmoll_src_macports_dports_science_openmpi/work/build" && /opt/local/var/macports/build/_Users_mmoll_src_macports_dports_science_openmpi/work/openmpi-1.3.3/configure --prefix=/opt/local --with-xgrid --sysconfdir=/opt/local/etc/openmpi --includedir=/opt/local/include/openmpi --bindir=/opt/local/lib/openmpi/bin --mandir=/opt/local/share/man --enable-f77 --enable-f90 " returned error 1
316Command output: checking prefix for lsym labels... L
317checking prefix for function in .type...
318checking if .size is needed... no
319checking if .align directive takes logarithmic value... yes
320checking if /usr/bin/gcc-4.0 supports GCC inline assembly... yes
321checking if /usr/bin/gcc-4.0 supports DEC inline assembly... no
322checking if /usr/bin/gcc-4.0 supports XLC inline assembly... no
323checking if /usr/bin/g++-4.0 supports GCC inline assembly... yes
324checking if /usr/bin/g++-4.0 supports DEC inline assembly... no
325checking if /usr/bin/g++-4.0 supports XLC inline assembly... no
326checking for assembly format... default-.text-.globl-:-_-L--0-1-1-1-0
327checking for asssembly architecture... IA32
328checking for perl... perl
329checking for pre-built assembly file... yes (atomic-ia32-osx.s)
330checking for atomic assembly filename... atomic-ia32-osx.s
331
332*** Fortran 77 compiler
333checking whether we are using the GNU Fortran 77 compiler... no
334checking whether /opt/local/bin/gfortran-mp-4.3 accepts -g... yes
335checking if Fortran 77 compiler works... no
336**********************************************************************
337* It appears that your Fortran 77 compiler is unable to produce working
338* executables.  A simple test application failed to properly
339* execute.  Note that this is likely not a problem with Open MPI,
340* but a problem with the local compiler installation.  More
341* information (including exactly what command was given to the
342* compiler and what error resulted when the command was executed) is
343* available in the config.log file in this directory.
344**********************************************************************
345configure: error: Could not run a simple Fortran 77 program.  Aborting.
346
347    while executing
348"$procedure $targetname"
349Warning: the following items did not execute (for openmpi): org.macports.build org.macports.configure
350Error: Status 1 encountered during processing.