localhost:~$ sudo port -v build py25-shogun ---> Fetching py25-shogun ---> Verifying checksum(s) for py25-shogun ---> Checksumming shogun-0.6.7.tar.bz2 ---> Extracting py25-shogun ---> Extracting shogun-0.6.7.tar.bz2 ---> Applying patches to py25-shogun ---> Applying /opt/local/var/macports/sources/rsync.macports.org/release/ports/python/py25-shogun/files/patch-src-configure.diff patching file configure ---> Applying /opt/local/var/macports/sources/rsync.macports.org/release/ports/python/py25-shogun/files/patch-src-lib-lapack.cpp.diff patching file lib/lapack.cpp ---> Configuring py25-shogun Running configure for SHOGUN version 0.6.7 Enabling python interface Detected Operating System: Darwin Detected Host Architecture: i386 Checking for C Compiler ... 4.0.1, ok Checking for C Compiler flags ... -O2 -g -Wall -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce Checking for C++ Compiler ... 4.0.1, ok Checking for C++ Compiler flags ... -O2 -g -Wall -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce Checking for makedepend ... /opt/local/bin/gcc-mp-4.3 -MM Checking for Python ... 2.5.4 Checking for GNU Make ... GNU Make 3.81 Checking for Doxygen ... doxygen not detected, for documentation please install Checking for CPU vendor ... GenuineIntel (6:15:11) Checking for CPU type ... Intel(R) Core(TM)2 Duo CPU T7500 @ 2.20GHz Checking for GCC & CPU optimization abilities ... pentium-m Checking for xmmintrin.h ... yes Checking for mm3dnow.h ... yes Checking for Math support (-lm) ... yes Checking for Math powl() support ... no - resorting to pow() Checking for Math sqrtl() support ... no - resorting to sqrt() Checking for Math log2() support ... no - resorting to emulation() Checking for Posix threads support ... yes Checking for Mindy support ... no - never mind Checking for AMD ACML support ... no Checking for Intel MKL support ... no Checking for Atlas support ... no Checking for Vanilla lapack and blas support ... yes Checking for Python numpy support ... 1.2.1 Checking for Python/Python Numpy Developer Files ... yes Checking for CPLEX support ... ./configure: line 2566: echo: write error: Broken pipe no Checking for GLPK ... yes Checking for lpsolve Developer Files ... yes SHOGUN was configured for python interface with the following configure options --prefix=/opt/local --disable-svm-light --interface=python --python=/opt/local/bin/python2.5 --libs=/opt/local/lib --includes=/opt/local/include --cxx=/opt/local/bin/g++-mp-4.3 --cc=/opt/local/bin/gcc-mp-4.3 --install-path=/opt/local --enable-readline --destdir=/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py25-shogun/work/destroot type "make" now to compile ---> Building py25-shogun find . -mindepth 2 -name "*.c" -o -name "*.cpp" \ -exec /opt/local/bin/gcc-mp-4.3 -MM -DDARWIN -DHAVE_LAPACK -DHAVE_LAPACK -DHAVE_PYTHON -DUSE_GLPK -DUSE_LPSOLVE -DYY_NEVER_INTERACTIVE -DPARSER_LP -DINVERSE_ACTIVE=INVERSE_LUSOL -DRoleIsExternalInvEngine -DHAVE_LARGEFILE -DUSE_SHORTREAL_KERNELCACHE -DUSE_TREEMEM -DUSE_BIGSTATES -DUSE_HMMCACHE -DGPL -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. {} -MT {}.o \; >.depend ================================= ==== Generating dependencies ==== ================================= find . -mindepth 2 -name "*.i" -o \ -name "*.h" -o -name "*.cpp" -o -name "*.cpp" | \ cut -c 3- | \ /opt/local/bin/python2.5 .generate_link_dependencies.py "_" "so" >>.depend test -f .depend && make CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o base/Parallel.cpp.o base/Parallel.cpp ======================================================================================== ==== Building shogun for platform Darwin-i386 target sg.so ==== opts: -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread ======================================================================================== CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o base/SGObject.cpp.o base/SGObject.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o base/Version.cpp.o base/Version.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/Classifier.cpp.o classifier/Classifier.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/KernelPerceptron.cpp.o classifier/KernelPerceptron.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/KNN.cpp.o classifier/KNN.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/LDA.cpp.o classifier/LDA.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/LinearClassifier.cpp.o classifier/LinearClassifier.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/LPBoost.cpp.o classifier/LPBoost.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/LPM.cpp.o classifier/LPM.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/Perceptron.cpp.o classifier/Perceptron.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/PluginEstimate.cpp.o classifier/PluginEstimate.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/SparseLinearClassifier.cpp.o classifier/SparseLinearClassifier.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/SubGradientLPM.cpp.o classifier/SubGradientLPM.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/svm/CPLEXSVM.cpp.o classifier/svm/CPLEXSVM.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/svm/gmnplib.cpp.o classifier/svm/gmnplib.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/svm/GMNPSVM.cpp.o classifier/svm/GMNPSVM.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/svm/gnpplib.cpp.o classifier/svm/gnpplib.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/svm/GNPPSVM.cpp.o classifier/svm/GNPPSVM.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/svm/GPBTSVM.cpp.o classifier/svm/GPBTSVM.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/svm/gpdt.cpp.o classifier/svm/gpdt.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/svm/gpdtsolve.cpp.o classifier/svm/gpdtsolve.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/svm/gpm.cpp.o classifier/svm/gpm.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/svm/LibLinear.cpp.o classifier/svm/LibLinear.cpp /opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/svm/libocas.cpp.o classifier/svm/libocas.cpp In file included from classifier/svm/libocas.cpp:29: ./classifier/svm/libocas_common.h:9:1: warning: "MIN" redefined In file included from /usr/include/sys/ucred.h:75, from /usr/include/sys/sysctl.h:83, from ./base/Parallel.h:22, from ./base/SGObject.h:15, from ./lib/Mathematics.h:19, from ./classifier/svm/libocas_common.h:1, from classifier/svm/libocas.cpp:29: /usr/include/sys/param.h:216:1: warning: this is the location of the previous definition In file included from classifier/svm/libocas.cpp:29: ./classifier/svm/libocas_common.h:10:1: warning: "MAX" redefined In file included from /usr/include/sys/ucred.h:75, from /usr/include/sys/sysctl.h:83, from ./base/Parallel.h:22, from ./base/SGObject.h:15, from ./lib/Mathematics.h:19, from ./classifier/svm/libocas_common.h:1, from classifier/svm/libocas.cpp:29: /usr/include/sys/param.h:219:1: warning: this is the location of the previous definition CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/svm/LibSVM.cpp.o classifier/svm/LibSVM.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/svm/LibSVMMultiClass.cpp.o classifier/svm/LibSVMMultiClass.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/svm/LibSVMOneClass.cpp.o classifier/svm/LibSVMOneClass.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/svm/MPDSVM.cpp.o classifier/svm/MPDSVM.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/svm/MultiClassSVM.cpp.o classifier/svm/MultiClassSVM.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/svm/Optimizer.cpp.o classifier/svm/Optimizer.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/svm/pr_loqo.cpp.o classifier/svm/pr_loqo.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/svm/qpbsvmlib.cpp.o classifier/svm/qpbsvmlib.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/svm/qpssvmlib.cpp.o classifier/svm/qpssvmlib.cpp In file included from classifier/svm/qpssvmlib.cpp:77: ./classifier/svm/libocas_common.h:9:1: warning: "MIN" redefined In file included from /usr/include/sys/ucred.h:75, from /usr/include/sys/sysctl.h:83, from ./base/Parallel.h:22, from ./base/SGObject.h:15, from ./lib/Mathematics.h:19, from ./classifier/svm/libocas_common.h:1, from classifier/svm/qpssvmlib.cpp:77: /usr/include/sys/param.h:216:1: warning: this is the location of the previous definition In file included from classifier/svm/qpssvmlib.cpp:77: ./classifier/svm/libocas_common.h:10:1: warning: "MAX" redefined In file included from /usr/include/sys/ucred.h:75, from /usr/include/sys/sysctl.h:83, from ./base/Parallel.h:22, from ./base/SGObject.h:15, from ./lib/Mathematics.h:19, from ./classifier/svm/libocas_common.h:1, from classifier/svm/qpssvmlib.cpp:77: /usr/include/sys/param.h:219:1: warning: this is the location of the previous definition CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/svm/ssl.cpp.o classifier/svm/ssl.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/svm/SubGradientSVM.cpp.o classifier/svm/SubGradientSVM.cpp /opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/svm/SVM.cpp.o classifier/svm/SVM.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/svm/SVM_libsvm.cpp.o classifier/svm/SVM_libsvm.cpp /opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/svm/SVM_light.cpp.o classifier/svm/SVM_light.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/svm/SVM_linear.cpp.o classifier/svm/SVM_linear.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/svm/SVMLin.cpp.o classifier/svm/SVMLin.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/svm/SVMOcas.cpp.o classifier/svm/SVMOcas.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/svm/SVMSGD.cpp.o classifier/svm/SVMSGD.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/svm/Tron.cpp.o classifier/svm/Tron.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o classifier/svm/WDSVMOcas.cpp.o classifier/svm/WDSVMOcas.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o clustering/Hierarchical.cpp.o clustering/Hierarchical.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o clustering/KMeans.cpp.o clustering/KMeans.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o distance/BrayCurtisDistance.cpp.o distance/BrayCurtisDistance.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o distance/CanberraMetric.cpp.o distance/CanberraMetric.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o distance/CanberraWordDistance.cpp.o distance/CanberraWordDistance.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o distance/ChebyshewMetric.cpp.o distance/ChebyshewMetric.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o distance/ChiSquareDistance.cpp.o distance/ChiSquareDistance.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o distance/CosineDistance.cpp.o distance/CosineDistance.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o distance/Distance.cpp.o distance/Distance.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o distance/DistanceMachine.cpp.o distance/DistanceMachine.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o distance/EuclidianDistance.cpp.o distance/EuclidianDistance.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o distance/GeodesicMetric.cpp.o distance/GeodesicMetric.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o distance/HammingWordDistance.cpp.o distance/HammingWordDistance.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o distance/JensenMetric.cpp.o distance/JensenMetric.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o distance/ManhattanMetric.cpp.o distance/ManhattanMetric.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o distance/ManhattanWordDistance.cpp.o distance/ManhattanWordDistance.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o distance/MinkowskiMetric.cpp.o distance/MinkowskiMetric.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o distance/SparseEuclidianDistance.cpp.o distance/SparseEuclidianDistance.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o distance/TanimotoDistance.cpp.o distance/TanimotoDistance.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o distributions/Distribution.cpp.o distributions/Distribution.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o distributions/histogram/Histogram.cpp.o distributions/histogram/Histogram.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o distributions/hmm/GHMM.cpp.o distributions/hmm/GHMM.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o distributions/hmm/HMM.cpp.o distributions/hmm/HMM.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o distributions/hmm/LinearHMM.cpp.o distributions/hmm/LinearHMM.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o evaluation/PerformanceMeasures.cpp.o evaluation/PerformanceMeasures.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o features/Alphabet.cpp.o features/Alphabet.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o features/ByteFeatures.cpp.o features/ByteFeatures.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o features/CharFeatures.cpp.o features/CharFeatures.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o features/CombinedFeatures.cpp.o features/CombinedFeatures.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o features/Features.cpp.o features/Features.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o features/FKFeatures.cpp.o features/FKFeatures.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o features/IntFeatures.cpp.o features/IntFeatures.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o features/Labels.cpp.o features/Labels.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o features/MindyGramFeatures.cpp.o features/MindyGramFeatures.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o features/RealFeatures.cpp.o features/RealFeatures.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o features/RealFileFeatures.cpp.o features/RealFileFeatures.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o features/ShortFeatures.cpp.o features/ShortFeatures.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o features/ShortRealFeatures.cpp.o features/ShortRealFeatures.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o features/StringFeatures.cpp.o features/StringFeatures.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o features/TOPFeatures.cpp.o features/TOPFeatures.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o features/WordFeatures.cpp.o features/WordFeatures.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o guilib/GUIClassifier.cpp.o guilib/GUIClassifier.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o guilib/GUIDistance.cpp.o guilib/GUIDistance.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o guilib/GUIFeatures.cpp.o guilib/GUIFeatures.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o guilib/GUIHMM.cpp.o guilib/GUIHMM.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o guilib/GUIKernel.cpp.o guilib/GUIKernel.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o guilib/GUILabels.cpp.o guilib/GUILabels.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o guilib/GUIMath.cpp.o guilib/GUIMath.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o guilib/GUIPluginEstimate.cpp.o guilib/GUIPluginEstimate.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o guilib/GUIPreProc.cpp.o guilib/GUIPreProc.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o guilib/GUIStructure.cpp.o guilib/GUIStructure.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o guilib/GUITime.cpp.o guilib/GUITime.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o interface/CmdLineInterface.cpp.o interface/CmdLineInterface.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o interface/MatlabInterface.cpp.o interface/MatlabInterface.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o interface/OctaveInterface.cpp.o interface/OctaveInterface.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o interface/PythonInterface.cpp.o interface/PythonInterface.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o interface/RInterface.cpp.o interface/RInterface.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o interface/SGInterface.cpp.o interface/SGInterface.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o kernel/AUCKernel.cpp.o kernel/AUCKernel.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o kernel/Chi2Kernel.cpp.o kernel/Chi2Kernel.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o kernel/CombinedKernel.cpp.o kernel/CombinedKernel.cpp /opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o kernel/CommUlongStringKernel.cpp.o kernel/CommUlongStringKernel.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o kernel/CommWordStringKernel.cpp.o kernel/CommWordStringKernel.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o kernel/ConstKernel.cpp.o kernel/ConstKernel.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o kernel/CustomKernel.cpp.o kernel/CustomKernel.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o kernel/DiagKernel.cpp.o kernel/DiagKernel.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o kernel/DistanceKernel.cpp.o kernel/DistanceKernel.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o kernel/FixedDegreeStringKernel.cpp.o kernel/FixedDegreeStringKernel.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o kernel/GaussianKernel.cpp.o kernel/GaussianKernel.cpp /opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o kernel/GaussianShiftKernel.cpp.o kernel/GaussianShiftKernel.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o kernel/GaussianShortRealKernel.cpp.o kernel/GaussianShortRealKernel.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o kernel/HistogramWordStringKernel.cpp.o kernel/HistogramWordStringKernel.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o kernel/Kernel.cpp.o kernel/Kernel.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o kernel/KernelMachine.cpp.o kernel/KernelMachine.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o kernel/LinearByteKernel.cpp.o kernel/LinearByteKernel.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o kernel/LinearKernel.cpp.o kernel/LinearKernel.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o kernel/LinearStringKernel.cpp.o kernel/LinearStringKernel.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o kernel/LinearWordKernel.cpp.o kernel/LinearWordKernel.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o kernel/LocalAlignmentStringKernel.cpp.o kernel/LocalAlignmentStringKernel.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o kernel/LocalityImprovedStringKernel.cpp.o kernel/LocalityImprovedStringKernel.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o kernel/MatchWordStringKernel.cpp.o kernel/MatchWordStringKernel.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o kernel/MindyGramKernel.cpp.o kernel/MindyGramKernel.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o kernel/OligoKernel.cpp.o kernel/OligoKernel.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o kernel/PolyKernel.cpp.o kernel/PolyKernel.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o kernel/PolyMatchStringKernel.cpp.o kernel/PolyMatchStringKernel.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o kernel/PolyMatchWordStringKernel.cpp.o kernel/PolyMatchWordStringKernel.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o kernel/PyramidChi2.cpp.o kernel/PyramidChi2.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o kernel/SalzbergWordStringKernel.cpp.o kernel/SalzbergWordStringKernel.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o kernel/SigmoidKernel.cpp.o kernel/SigmoidKernel.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o kernel/SimpleLocalityImprovedStringKernel.cpp.o kernel/SimpleLocalityImprovedStringKernel.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o kernel/SparseGaussianKernel.cpp.o kernel/SparseGaussianKernel.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o kernel/SparseLinearKernel.cpp.o kernel/SparseLinearKernel.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o kernel/SparsePolyKernel.cpp.o kernel/SparsePolyKernel.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o kernel/WeightedCommWordStringKernel.cpp.o kernel/WeightedCommWordStringKernel.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o kernel/WeightedDegreePositionStringKernel.cpp.o kernel/WeightedDegreePositionStringKernel.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o kernel/WeightedDegreeStringKernel.cpp.o kernel/WeightedDegreeStringKernel.cpp /opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o lib/Cplex.cpp.o lib/Cplex.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o lib/File.cpp.o lib/File.cpp /opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o lib/io.cpp.o lib/io.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o lib/lapack.cpp.o lib/lapack.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o lib/Mathematics.cpp.o lib/Mathematics.cpp /opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o lib/memory.cpp.o lib/memory.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o lib/ShogunException.cpp.o lib/ShogunException.cpp /opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o lib/Signal.cpp.o lib/Signal.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o lib/Time.cpp.o lib/Time.cpp /opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include/numpy/__multiarray_api.h:958: warning: 'int _import_array()' defined but not used CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o lib/Trie.cpp.o lib/Trie.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o preproc/LogPlusOne.cpp.o preproc/LogPlusOne.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o preproc/NormDerivativeLem3.cpp.o preproc/NormDerivativeLem3.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o preproc/NormOne.cpp.o preproc/NormOne.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o preproc/PCACut.cpp.o preproc/PCACut.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o preproc/PreProc.cpp.o preproc/PreProc.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o preproc/PruneVarSubMean.cpp.o preproc/PruneVarSubMean.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o preproc/SortUlongString.cpp.o preproc/SortUlongString.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o preproc/SortWordString.cpp.o preproc/SortWordString.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o regression/KRR.cpp.o regression/KRR.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o regression/svr/LibSVR.cpp.o regression/svr/LibSVR.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o regression/svr/SVR_light.cpp.o regression/svr/SVR_light.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o structure/DynProg.cpp.o structure/DynProg.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o structure/Plif.cpp.o structure/Plif.cpp CC -fno-strict-aliasing -fPIC -O2 -g -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wimplicit -Wparentheses -Wshadow -O9 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -march=i486 -mtune=i686 -pthread -c -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy/core/include -I/opt/local/include -I. -o structure/PlifArray.cpp.o structure/PlifArray.cpp CC ./base/Parallel.cpp.o ./base/SGObject.cpp.o ./base/Version.cpp.o ./classifier/Classifier.cpp.o ./classifier/KernelPerceptron.cpp.o ./classifier/KNN.cpp.o ./classifier/LDA.cpp.o ./classifier/LinearClassifier.cpp.o ./classifier/LPBoost.cpp.o ./classifier/LPM.cpp.o ./classifier/Perceptron.cpp.o ./classifier/PluginEstimate.cpp.o ./classifier/SparseLinearClassifier.cpp.o ./classifier/SubGradientLPM.cpp.o ./classifier/svm/CPLEXSVM.cpp.o ./classifier/svm/gmnplib.cpp.o ./classifier/svm/GMNPSVM.cpp.o ./classifier/svm/gnpplib.cpp.o ./classifier/svm/GNPPSVM.cpp.o ./classifier/svm/GPBTSVM.cpp.o ./classifier/svm/gpdt.cpp.o ./classifier/svm/gpdtsolve.cpp.o ./classifier/svm/gpm.cpp.o ./classifier/svm/LibLinear.cpp.o ./classifier/svm/libocas.cpp.o ./classifier/svm/LibSVM.cpp.o ./classifier/svm/LibSVMMultiClass.cpp.o ./classifier/svm/LibSVMOneClass.cpp.o ./classifier/svm/MPDSVM.cpp.o ./classifier/svm/MultiClassSVM.cpp.o ./classifier/svm/Optimizer.cpp.o ./classifier/svm/pr_loqo.cpp.o ./classifier/svm/qpbsvmlib.cpp.o ./classifier/svm/qpssvmlib.cpp.o ./classifier/svm/ssl.cpp.o ./classifier/svm/SubGradientSVM.cpp.o ./classifier/svm/SVM.cpp.o ./classifier/svm/SVM_libsvm.cpp.o ./classifier/svm/SVM_light.cpp.o ./classifier/svm/SVM_linear.cpp.o ./classifier/svm/SVMLin.cpp.o ./classifier/svm/SVMOcas.cpp.o ./classifier/svm/SVMSGD.cpp.o ./classifier/svm/Tron.cpp.o ./classifier/svm/WDSVMOcas.cpp.o ./clustering/Hierarchical.cpp.o ./clustering/KMeans.cpp.o ./distance/BrayCurtisDistance.cpp.o ./distance/CanberraMetric.cpp.o ./distance/CanberraWordDistance.cpp.o ./distance/ChebyshewMetric.cpp.o ./distance/ChiSquareDistance.cpp.o ./distance/CosineDistance.cpp.o ./distance/Distance.cpp.o ./distance/DistanceMachine.cpp.o ./distance/EuclidianDistance.cpp.o ./distance/GeodesicMetric.cpp.o ./distance/HammingWordDistance.cpp.o ./distance/JensenMetric.cpp.o ./distance/ManhattanMetric.cpp.o ./distance/ManhattanWordDistance.cpp.o ./distance/MinkowskiMetric.cpp.o ./distance/SparseEuclidianDistance.cpp.o ./distance/TanimotoDistance.cpp.o ./distributions/Distribution.cpp.o ./distributions/histogram/Histogram.cpp.o ./distributions/hmm/GHMM.cpp.o ./distributions/hmm/HMM.cpp.o ./distributions/hmm/LinearHMM.cpp.o ./evaluation/PerformanceMeasures.cpp.o ./features/Alphabet.cpp.o ./features/ByteFeatures.cpp.o ./features/CharFeatures.cpp.o ./features/CombinedFeatures.cpp.o ./features/Features.cpp.o ./features/FKFeatures.cpp.o ./features/IntFeatures.cpp.o ./features/Labels.cpp.o ./features/MindyGramFeatures.cpp.o ./features/RealFeatures.cpp.o ./features/RealFileFeatures.cpp.o ./features/ShortFeatures.cpp.o ./features/ShortRealFeatures.cpp.o ./features/StringFeatures.cpp.o ./features/TOPFeatures.cpp.o ./features/WordFeatures.cpp.o ./guilib/GUIClassifier.cpp.o ./guilib/GUIDistance.cpp.o ./guilib/GUIFeatures.cpp.o ./guilib/GUIHMM.cpp.o ./guilib/GUIKernel.cpp.o ./guilib/GUILabels.cpp.o ./guilib/GUIMath.cpp.o ./guilib/GUIPluginEstimate.cpp.o ./guilib/GUIPreProc.cpp.o ./guilib/GUIStructure.cpp.o ./guilib/GUITime.cpp.o ./interface/CmdLineInterface.cpp.o ./interface/MatlabInterface.cpp.o ./interface/OctaveInterface.cpp.o ./interface/PythonInterface.cpp.o ./interface/RInterface.cpp.o ./interface/SGInterface.cpp.o ./kernel/AUCKernel.cpp.o ./kernel/Chi2Kernel.cpp.o ./kernel/CombinedKernel.cpp.o ./kernel/CommUlongStringKernel.cpp.o ./kernel/CommWordStringKernel.cpp.o ./kernel/ConstKernel.cpp.o ./kernel/CustomKernel.cpp.o ./kernel/DiagKernel.cpp.o ./kernel/DistanceKernel.cpp.o ./kernel/FixedDegreeStringKernel.cpp.o ./kernel/GaussianKernel.cpp.o ./kernel/GaussianShiftKernel.cpp.o ./kernel/GaussianShortRealKernel.cpp.o ./kernel/HistogramWordStringKernel.cpp.o ./kernel/Kernel.cpp.o ./kernel/KernelMachine.cpp.o ./kernel/LinearByteKernel.cpp.o ./kernel/LinearKernel.cpp.o ./kernel/LinearStringKernel.cpp.o ./kernel/LinearWordKernel.cpp.o ./kernel/LocalAlignmentStringKernel.cpp.o ./kernel/LocalityImprovedStringKernel.cpp.o ./kernel/MatchWordStringKernel.cpp.o ./kernel/MindyGramKernel.cpp.o ./kernel/OligoKernel.cpp.o ./kernel/PolyKernel.cpp.o ./kernel/PolyMatchStringKernel.cpp.o ./kernel/PolyMatchWordStringKernel.cpp.o ./kernel/PyramidChi2.cpp.o ./kernel/SalzbergWordStringKernel.cpp.o ./kernel/SigmoidKernel.cpp.o ./kernel/SimpleLocalityImprovedStringKernel.cpp.o ./kernel/SparseGaussianKernel.cpp.o ./kernel/SparseLinearKernel.cpp.o ./kernel/SparsePolyKernel.cpp.o ./kernel/WeightedCommWordStringKernel.cpp.o ./kernel/WeightedDegreePositionStringKernel.cpp.o ./kernel/WeightedDegreeStringKernel.cpp.o ./lib/Cplex.cpp.o ./lib/File.cpp.o ./lib/io.cpp.o ./lib/lapack.cpp.o ./lib/Mathematics.cpp.o ./lib/memory.cpp.o ./lib/ShogunException.cpp.o ./lib/Signal.cpp.o ./lib/Time.cpp.o ./lib/Trie.cpp.o ./preproc/LogPlusOne.cpp.o ./preproc/NormDerivativeLem3.cpp.o ./preproc/NormOne.cpp.o ./preproc/PCACut.cpp.o ./preproc/PreProc.cpp.o ./preproc/PruneVarSubMean.cpp.o ./preproc/SortUlongString.cpp.o ./preproc/SortWordString.cpp.o ./regression/KRR.cpp.o ./regression/svr/LibSVR.cpp.o ./regression/svr/SVR_light.cpp.o ./structure/DynProg.cpp.o ./structure/Plif.cpp.o ./structure/PlifArray.cpp.o -lpython2.5 -ldl -bundle -Wl,-flat_namespace -L/opt/local/lib -undefined error -lm -pthread -llapack -lcblas -lglpk -lm -L/opt/local/lib/ -llpsolve55 -o sg.so -lpython2.5 -ldl -bundle -Wl,-flat_namespace -L/opt/local/lib/ -llpsolve55 Undefined symbols: "operator new(unsigned long, std::nothrow_t const&)", referenced from: std::pair*, int> std::__get_temporary_buffer >(int, std::pair*)in OligoKernel.cpp.o "std::__throw_length_error(char const*)", referenced from: std::vector >::_M_fill_insert(__gnu_cxx::__normal_iterator > >, unsigned long, double const&)in OligoKernel.cpp.o std::vector, std::allocator > >::_M_fill_insert(__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned long, std::pair const&)in OligoKernel.cpp.o std::vector, std::allocator > >, std::allocator, std::allocator > > > >::_M_fill_insert(__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, unsigned long, std::vector, std::allocator > > const&)in OligoKernel.cpp.o "___cxa_guard_acquire", referenced from: CWeightedDegreePositionStringKernel::compute_POIM(int, int&, int&, double*, int, int*, double*, double*)in WeightedDegreePositionStringKernel.cpp.o CWeightedDegreePositionStringKernel::extract_w(int, int&, int&, double*, int, int*, double*)in WeightedDegreePositionStringKernel.cpp.o "std::__throw_out_of_range(char const*)", referenced from: COligoKernel::kernelOligoFast(std::vector, std::allocator > > const&, std::vector, std::allocator > > const&, std::vector > const&, int)in OligoKernel.cpp.o "std::basic_string, std::allocator >::_Rep::_M_destroy(std::allocator const&)", referenced from: COligoKernel::compute(int, int)in OligoKernel.cpp.o COligoKernel::compute(int, int)in OligoKernel.cpp.o COligoKernel::compute(int, int)in OligoKernel.cpp.o COligoKernel::compute(int, int)in OligoKernel.cpp.o COligoKernel::compute(int, int)in OligoKernel.cpp.o COligoKernel::compute(int, int)in OligoKernel.cpp.o COligoKernel::compute(int, int)in OligoKernel.cpp.o COligoKernel::compute(int, int)in OligoKernel.cpp.o "std::_Rb_tree_decrement(std::_Rb_tree_node_base*)", referenced from: std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::insert_unique(std::pair const&)in OligoKernel.cpp.o "vtable for __cxxabiv1::__si_class_type_info", referenced from: typeinfo for CClassifierin Classifier.cpp.o typeinfo for CKernelPerceptronin KernelPerceptron.cpp.o typeinfo for CKNNin KNN.cpp.o typeinfo for CLDAin LDA.cpp.o typeinfo for CLinearClassifierin LinearClassifier.cpp.o typeinfo for CPerceptronin Perceptron.cpp.o typeinfo for CPluginEstimatein PluginEstimate.cpp.o typeinfo for CSparseLinearClassifierin SparseLinearClassifier.cpp.o typeinfo for CGMNPLibin gmnplib.cpp.o typeinfo for CGMNPSVMin GMNPSVM.cpp.o typeinfo for CGNPPLibin gnpplib.cpp.o typeinfo for CGNPPSVMin GNPPSVM.cpp.o typeinfo for CGPBTSVMin GPBTSVM.cpp.o typeinfo for QPproblemin gpdt.cpp.o typeinfo for CLibLinearin LibLinear.cpp.o typeinfo for CLibSVMin LibSVM.cpp.o typeinfo for CLibSVMMultiClassin LibSVMMultiClass.cpp.o typeinfo for CLibSVMOneClassin LibSVMOneClass.cpp.o typeinfo for CMPDSVMin MPDSVM.cpp.o typeinfo for CCachein MPDSVM.cpp.o typeinfo for CMultiClassSVMin MultiClassSVM.cpp.o typeinfo for CQPBSVMLibin qpbsvmlib.cpp.o typeinfo for CSubGradientSVMin SubGradientSVM.cpp.o typeinfo for CSVMin SVM.cpp.o typeinfo for Kernelin SVM_libsvm.cpp.o typeinfo for Solver_NUin SVM_libsvm.cpp.o typeinfo for SVC_Qin SVM_libsvm.cpp.o typeinfo for ONE_CLASS_Qin SVM_libsvm.cpp.o typeinfo for SVR_Qin SVM_libsvm.cpp.o typeinfo for l2loss_svm_funin SVM_linear.cpp.o typeinfo for l2_lr_funin SVM_linear.cpp.o typeinfo for CSVMLinin SVMLin.cpp.o typeinfo for CSVMOcasin SVMOcas.cpp.o typeinfo for CSVMSGDin SVMSGD.cpp.o typeinfo for CTronin Tron.cpp.o typeinfo for CWDSVMOcasin WDSVMOcas.cpp.o typeinfo for CHierarchicalin Hierarchical.cpp.o typeinfo for CKMeansin KMeans.cpp.o typeinfo for CBrayCurtisDistancein BrayCurtisDistance.cpp.o typeinfo for CSimpleDistancein BrayCurtisDistance.cpp.o typeinfo for CCanberraMetricin CanberraMetric.cpp.o typeinfo for CSimpleDistancein CanberraMetric.cpp.o typeinfo for CCanberraWordDistancein CanberraWordDistance.cpp.o typeinfo for CStringDistancein CanberraWordDistance.cpp.o typeinfo for CChebyshewMetricin ChebyshewMetric.cpp.o typeinfo for CSimpleDistancein ChebyshewMetric.cpp.o typeinfo for CChiSquareDistancein ChiSquareDistance.cpp.o typeinfo for CSimpleDistancein ChiSquareDistance.cpp.o typeinfo for CCosineDistancein CosineDistance.cpp.o typeinfo for CSimpleDistancein CosineDistance.cpp.o typeinfo for CDistancein Distance.cpp.o typeinfo for CDistanceMachinein DistanceMachine.cpp.o typeinfo for CEuclidianDistancein EuclidianDistance.cpp.o typeinfo for CRealDistancein EuclidianDistance.cpp.o typeinfo for CSimpleDistancein EuclidianDistance.cpp.o typeinfo for CGeodesicMetricin GeodesicMetric.cpp.o typeinfo for CSimpleDistancein GeodesicMetric.cpp.o typeinfo for CHammingWordDistancein HammingWordDistance.cpp.o typeinfo for CStringDistancein HammingWordDistance.cpp.o typeinfo for CJensenMetricin JensenMetric.cpp.o typeinfo for CSimpleDistancein JensenMetric.cpp.o typeinfo for CManhattanMetricin ManhattanMetric.cpp.o typeinfo for CSimpleDistancein ManhattanMetric.cpp.o typeinfo for CManhattanWordDistancein ManhattanWordDistance.cpp.o typeinfo for CStringDistancein ManhattanWordDistance.cpp.o typeinfo for CMinkowskiMetricin MinkowskiMetric.cpp.o typeinfo for CSimpleDistancein MinkowskiMetric.cpp.o typeinfo for CSparseEuclidianDistancein SparseEuclidianDistance.cpp.o typeinfo for CSparseDistancein SparseEuclidianDistance.cpp.o typeinfo for CTanimotoDistancein TanimotoDistance.cpp.o typeinfo for CSimpleDistancein TanimotoDistance.cpp.o typeinfo for CDistributionin Distribution.cpp.o typeinfo for CHistogramin Histogram.cpp.o typeinfo for CGHMMin GHMM.cpp.o typeinfo for CHMMin HMM.cpp.o typeinfo for CLinearHMMin LinearHMM.cpp.o typeinfo for CPerformanceMeasuresin PerformanceMeasures.cpp.o typeinfo for CAlphabetin Alphabet.cpp.o typeinfo for CByteFeaturesin ByteFeatures.cpp.o typeinfo for CSimpleFeaturesin ByteFeatures.cpp.o typeinfo for CCharFeaturesin CharFeatures.cpp.o typeinfo for CSimpleFeaturesin CharFeatures.cpp.o typeinfo for CCombinedFeaturesin CombinedFeatures.cpp.o typeinfo for CFeaturesin Features.cpp.o typeinfo for CFKFeaturesin FKFeatures.cpp.o typeinfo for CSimpleFeaturesin FKFeatures.cpp.o typeinfo for CCachein FKFeatures.cpp.o typeinfo for CIntFeaturesin IntFeatures.cpp.o typeinfo for CSimpleFeaturesin IntFeatures.cpp.o typeinfo for CLabelsin Labels.cpp.o typeinfo for CRealFeaturesin RealFeatures.cpp.o typeinfo for CSimpleFeaturesin RealFeatures.cpp.o typeinfo for CRealFileFeaturesin RealFileFeatures.cpp.o typeinfo for CSimpleFeaturesin RealFileFeatures.cpp.o typeinfo for CCachein RealFileFeatures.cpp.o typeinfo for CShortFeaturesin ShortFeatures.cpp.o typeinfo for CSimpleFeaturesin ShortFeatures.cpp.o typeinfo for CShortRealFeaturesin ShortRealFeatures.cpp.o typeinfo for CSimpleFeaturesin ShortRealFeatures.cpp.o typeinfo for CTOPFeaturesin TOPFeatures.cpp.o typeinfo for CSimpleFeaturesin TOPFeatures.cpp.o typeinfo for CCachein TOPFeatures.cpp.o typeinfo for CWordFeaturesin WordFeatures.cpp.o typeinfo for CSimpleFeaturesin WordFeatures.cpp.o typeinfo for CGUIClassifierin GUIClassifier.cpp.o typeinfo for CGUIDistancein GUIDistance.cpp.o typeinfo for CGUIFeaturesin GUIFeatures.cpp.o typeinfo for CSimpleFeaturesin GUIFeatures.cpp.o typeinfo for CStringFeaturesin GUIFeatures.cpp.o typeinfo for CSparseFeaturesin GUIFeatures.cpp.o typeinfo for CStringFeaturesin GUIFeatures.cpp.o typeinfo for CStringFeaturesin GUIFeatures.cpp.o typeinfo for CStringFeaturesin GUIFeatures.cpp.o typeinfo for CStringFeaturesin GUIFeatures.cpp.o typeinfo for CStringFeaturesin GUIFeatures.cpp.o typeinfo for CGUIHMMin GUIHMM.cpp.o typeinfo for CGUIKernelin GUIKernel.cpp.o typeinfo for CIdentityKernelNormalizerin GUIKernel.cpp.o typeinfo for CKernelNormalizerin GUIKernel.cpp.o typeinfo for CAvgDiagKernelNormalizerin GUIKernel.cpp.o typeinfo for CSqrtDiagKernelNormalizerin GUIKernel.cpp.o typeinfo for CFirstElementKernelNormalizerin GUIKernel.cpp.o typeinfo for CGUILabelsin GUILabels.cpp.o typeinfo for CGUIMathin GUIMath.cpp.o typeinfo for CGUIPluginEstimatein GUIPluginEstimate.cpp.o typeinfo for CGUIPreProcin GUIPreProc.cpp.o typeinfo for CGUIStructurein GUIStructure.cpp.o typeinfo for CArray3in GUIStructure.cpp.o typeinfo for CArrayin GUIStructure.cpp.o typeinfo for CGUITimein GUITime.cpp.o typeinfo for CPythonInterfacein PythonInterface.cpp.o typeinfo for CSGInterfacein SGInterface.cpp.o typeinfo for CArray2in SGInterface.cpp.o typeinfo for CArrayin SGInterface.cpp.o typeinfo for CDynamicArrayin SGInterface.cpp.o typeinfo for CStringFeaturesin SGInterface.cpp.o typeinfo for CStringFeaturesin SGInterface.cpp.o typeinfo for CSparseFeaturesin SGInterface.cpp.o typeinfo for CSimpleFeaturesin SGInterface.cpp.o typeinfo for CSimpleFeaturesin SGInterface.cpp.o typeinfo for CSimpleFeaturesin SGInterface.cpp.o typeinfo for CStringFeaturesin SGInterface.cpp.o typeinfo for CStringFeaturesin SGInterface.cpp.o typeinfo for CAUCKernelin AUCKernel.cpp.o typeinfo for CSimpleKernelin AUCKernel.cpp.o typeinfo for CChi2Kernelin Chi2Kernel.cpp.o typeinfo for CSimpleKernelin Chi2Kernel.cpp.o typeinfo for CCombinedKernelin CombinedKernel.cpp.o typeinfo for CCommUlongStringKernelin CommUlongStringKernel.cpp.o typeinfo for CStringKernelin CommUlongStringKernel.cpp.o typeinfo for CDynamicArrayin CommUlongStringKernel.cpp.o typeinfo for CDynamicArrayin CommUlongStringKernel.cpp.o typeinfo for CSqrtDiagKernelNormalizerin CommUlongStringKernel.cpp.o typeinfo for CKernelNormalizerin CommUlongStringKernel.cpp.o typeinfo for CCommWordStringKernelin CommWordStringKernel.cpp.o typeinfo for CStringKernelin CommWordStringKernel.cpp.o typeinfo for CSqrtDiagKernelNormalizerin CommWordStringKernel.cpp.o typeinfo for CKernelNormalizerin CommWordStringKernel.cpp.o typeinfo for CConstKernelin ConstKernel.cpp.o typeinfo for CCustomKernelin CustomKernel.cpp.o typeinfo for CDummyFeaturesin CustomKernel.cpp.o typeinfo for CDiagKernelin DiagKernel.cpp.o typeinfo for CDistanceKernelin DistanceKernel.cpp.o typeinfo for CFixedDegreeStringKernelin FixedDegreeStringKernel.cpp.o typeinfo for CStringKernelin FixedDegreeStringKernel.cpp.o typeinfo for CSqrtDiagKernelNormalizerin FixedDegreeStringKernel.cpp.o typeinfo for CKernelNormalizerin FixedDegreeStringKernel.cpp.o typeinfo for CGaussianKernelin GaussianKernel.cpp.o typeinfo for CSimpleKernelin GaussianKernel.cpp.o typeinfo for CGaussianShiftKernelin GaussianShiftKernel.cpp.o typeinfo for CGaussianShortRealKernelin GaussianShortRealKernel.cpp.o typeinfo for CSimpleKernelin GaussianShortRealKernel.cpp.o typeinfo for CHistogramWordStringKernelin HistogramWordStringKernel.cpp.o typeinfo for CStringKernelin HistogramWordStringKernel.cpp.o typeinfo for CKernelin Kernel.cpp.o typeinfo for CIdentityKernelNormalizerin Kernel.cpp.o typeinfo for CKernelNormalizerin Kernel.cpp.o typeinfo for CKernelMachinein KernelMachine.cpp.o typeinfo for CLinearByteKernelin LinearByteKernel.cpp.o typeinfo for CSimpleKernelin LinearByteKernel.cpp.o typeinfo for CLinearKernelin LinearKernel.cpp.o typeinfo for CSimpleKernelin LinearKernel.cpp.o typeinfo for CLinearStringKernelin LinearStringKernel.cpp.o typeinfo for CStringKernelin LinearStringKernel.cpp.o typeinfo for CLinearWordKernelin LinearWordKernel.cpp.o typeinfo for CSimpleKernelin LinearWordKernel.cpp.o typeinfo for CLocalAlignmentStringKernelin LocalAlignmentStringKernel.cpp.o typeinfo for CStringKernelin LocalAlignmentStringKernel.cpp.o typeinfo for CLocalityImprovedStringKernelin LocalityImprovedStringKernel.cpp.o typeinfo for CStringKernelin LocalityImprovedStringKernel.cpp.o typeinfo for CMatchWordStringKernelin MatchWordStringKernel.cpp.o typeinfo for CStringKernelin MatchWordStringKernel.cpp.o typeinfo for CAvgDiagKernelNormalizerin MatchWordStringKernel.cpp.o typeinfo for CKernelNormalizerin MatchWordStringKernel.cpp.o typeinfo for COligoKernelin OligoKernel.cpp.o typeinfo for CStringKernelin OligoKernel.cpp.o typeinfo for CSqrtDiagKernelNormalizerin OligoKernel.cpp.o typeinfo for CKernelNormalizerin OligoKernel.cpp.o typeinfo for CPolyKernelin PolyKernel.cpp.o typeinfo for CSimpleKernelin PolyKernel.cpp.o typeinfo for CSqrtDiagKernelNormalizerin PolyKernel.cpp.o typeinfo for CKernelNormalizerin PolyKernel.cpp.o typeinfo for CPolyMatchStringKernelin PolyMatchStringKernel.cpp.o typeinfo for CStringKernelin PolyMatchStringKernel.cpp.o typeinfo for CSqrtDiagKernelNormalizerin PolyMatchStringKernel.cpp.o typeinfo for CKernelNormalizerin PolyMatchStringKernel.cpp.o typeinfo for CPolyMatchWordStringKernelin PolyMatchWordStringKernel.cpp.o typeinfo for CStringKernelin PolyMatchWordStringKernel.cpp.o typeinfo for CSqrtDiagKernelNormalizerin PolyMatchWordStringKernel.cpp.o typeinfo for CKernelNormalizerin PolyMatchWordStringKernel.cpp.o typeinfo for CPyramidChi2in PyramidChi2.cpp.o typeinfo for CSimpleKernelin PyramidChi2.cpp.o typeinfo for CSalzbergWordStringKernelin SalzbergWordStringKernel.cpp.o typeinfo for CStringKernelin SalzbergWordStringKernel.cpp.o typeinfo for CSigmoidKernelin SigmoidKernel.cpp.o typeinfo for CSimpleKernelin SigmoidKernel.cpp.o typeinfo for CSimpleLocalityImprovedStringKernelin SimpleLocalityImprovedStringKernel.cpp.o typeinfo for CStringKernelin SimpleLocalityImprovedStringKernel.cpp.o typeinfo for CSparseGaussianKernelin SparseGaussianKernel.cpp.o typeinfo for CSparseKernelin SparseGaussianKernel.cpp.o typeinfo for CSparseLinearKernelin SparseLinearKernel.cpp.o typeinfo for CSparseKernelin SparseLinearKernel.cpp.o typeinfo for CSparsePolyKernelin SparsePolyKernel.cpp.o typeinfo for CSparseKernelin SparsePolyKernel.cpp.o typeinfo for CSqrtDiagKernelNormalizerin SparsePolyKernel.cpp.o typeinfo for CKernelNormalizerin SparsePolyKernel.cpp.o typeinfo for CWeightedCommWordStringKernelin WeightedCommWordStringKernel.cpp.o typeinfo for CWeightedDegreePositionStringKernelin WeightedDegreePositionStringKernel.cpp.o typeinfo for CStringKernelin WeightedDegreePositionStringKernel.cpp.o typeinfo for CDynamicArrayin WeightedDegreePositionStringKernel.cpp.o typeinfo for CTriein WeightedDegreePositionStringKernel.cpp.o typeinfo for CTriein WeightedDegreePositionStringKernel.cpp.o typeinfo for CSqrtDiagKernelNormalizerin WeightedDegreePositionStringKernel.cpp.o typeinfo for CKernelNormalizerin WeightedDegreePositionStringKernel.cpp.o typeinfo for CWeightedDegreeStringKernelin WeightedDegreeStringKernel.cpp.o typeinfo for CStringKernelin WeightedDegreeStringKernel.cpp.o typeinfo for CTriein WeightedDegreeStringKernel.cpp.o typeinfo for CFirstElementKernelNormalizerin WeightedDegreeStringKernel.cpp.o typeinfo for CKernelNormalizerin WeightedDegreeStringKernel.cpp.o typeinfo for CFilein File.cpp.o typeinfo for CDynamicArrayin File.cpp.o typeinfo for CSimpleFilein File.cpp.o typeinfo for CSimpleFilein File.cpp.o typeinfo for CSimpleFilein File.cpp.o typeinfo for CSimpleFilein File.cpp.o typeinfo for CSimpleFilein File.cpp.o typeinfo for CSimpleFilein File.cpp.o typeinfo for CSimpleFilein File.cpp.o typeinfo for CMathin Mathematics.cpp.o typeinfo for CSignalin Signal.cpp.o typeinfo for CTimein Time.cpp.o typeinfo for CLogPlusOnein LogPlusOne.cpp.o typeinfo for CSimplePreProcin LogPlusOne.cpp.o typeinfo for CNormDerivativeLem3in NormDerivativeLem3.cpp.o typeinfo for CSimplePreProcin NormDerivativeLem3.cpp.o typeinfo for CNormOnein NormOne.cpp.o typeinfo for CSimplePreProcin NormOne.cpp.o typeinfo for CPCACutin PCACut.cpp.o typeinfo for CSimplePreProcin PCACut.cpp.o typeinfo for CCachein PCACut.cpp.o typeinfo for CPreProcin PreProc.cpp.o typeinfo for CPruneVarSubMeanin PruneVarSubMean.cpp.o typeinfo for CSimplePreProcin PruneVarSubMean.cpp.o typeinfo for CCachein PruneVarSubMean.cpp.o typeinfo for CSortUlongStringin SortUlongString.cpp.o typeinfo for CStringPreProcin SortUlongString.cpp.o typeinfo for CSortWordStringin SortWordString.cpp.o typeinfo for CStringPreProcin SortWordString.cpp.o typeinfo for CKRRin KRR.cpp.o typeinfo for CLibSVRin LibSVR.cpp.o typeinfo for CDynProgin DynProg.cpp.o typeinfo for CArray2in DynProg.cpp.o typeinfo for CArrayin DynProg.cpp.o typeinfo for CArray3in DynProg.cpp.o typeinfo for CArrayin DynProg.cpp.o typeinfo for CArray2in DynProg.cpp.o typeinfo for CArray2in DynProg.cpp.o typeinfo for CArrayin DynProg.cpp.o typeinfo for CArray3in DynProg.cpp.o typeinfo for CArrayin DynProg.cpp.o typeinfo for CArray3in DynProg.cpp.o typeinfo for CArrayin DynProg.cpp.o typeinfo for CArray3in DynProg.cpp.o typeinfo for CArray2in DynProg.cpp.o typeinfo for CArray2in DynProg.cpp.o typeinfo for CArray2in DynProg.cpp.o typeinfo for CArrayin DynProg.cpp.o typeinfo for CArrayin DynProg.cpp.o typeinfo for CPlifin Plif.cpp.o typeinfo for CPlifBasein Plif.cpp.o typeinfo for CPlifArrayin PlifArray.cpp.o typeinfo for CPlifBasein PlifArray.cpp.o typeinfo for CDynamicArrayin PlifArray.cpp.o "std::nothrow", referenced from: __ZSt7nothrow$non_lazy_ptr in OligoKernel.cpp.o "__gnu_cxx::__exchange_and_add(int volatile*, int)", referenced from: COligoKernel::compute(int, int)in OligoKernel.cpp.o COligoKernel::compute(int, int)in OligoKernel.cpp.o COligoKernel::compute(int, int)in OligoKernel.cpp.o COligoKernel::compute(int, int)in OligoKernel.cpp.o COligoKernel::compute(int, int)in OligoKernel.cpp.o COligoKernel::compute(int, int)in OligoKernel.cpp.o COligoKernel::compute(int, int)in OligoKernel.cpp.o COligoKernel::compute(int, int)in OligoKernel.cpp.o "std::basic_string, std::allocator >::basic_string(char const*, std::allocator const&)", referenced from: COligoKernel::compute(int, int)in OligoKernel.cpp.o COligoKernel::compute(int, int)in OligoKernel.cpp.o "___cxa_begin_catch", referenced from: sg(_object*, _object*)in PythonInterface.cpp.o sg(_object*, _object*)in PythonInterface.cpp.o void std::__uninitialized_fill_n_aux<__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, unsigned long, std::vector, std::allocator > > >(__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, unsigned long, std::vector, std::allocator > > const&, __false_type)in OligoKernel.cpp.o std::vector, std::allocator > >, std::allocator, std::allocator > > > >::_M_fill_insert(__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, unsigned long, std::vector, std::allocator > > const&)in OligoKernel.cpp.o std::vector, std::allocator > >, std::allocator, std::allocator > > > >::_M_fill_insert(__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, unsigned long, std::vector, std::allocator > > const&)in OligoKernel.cpp.o std::vector, std::allocator > >, std::allocator, std::allocator > > > >::_M_fill_insert(__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, unsigned long, std::vector, std::allocator > > const&)in OligoKernel.cpp.o std::vector, std::allocator > >, std::allocator, std::allocator > > > >::_M_fill_insert(__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, unsigned long, std::vector, std::allocator > > const&)in OligoKernel.cpp.o std::vector, std::allocator > >, std::allocator, std::allocator > > > >::_M_fill_insert(__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, unsigned long, std::vector, std::allocator > > const&)in OligoKernel.cpp.o std::vector, std::allocator > >, std::allocator, std::allocator > > > >::_M_fill_insert(__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, unsigned long, std::vector, std::allocator > > const&)in OligoKernel.cpp.o "std::basic_string, std::allocator >::find(char, unsigned long) const", referenced from: COligoKernel::encodeOligo(std::basic_string, std::allocator > const&, unsigned int, std::basic_string, std::allocator > const&, std::vector, std::allocator > >&)in OligoKernel.cpp.o "std::basic_string, std::allocator >::_Rep::_S_empty_rep_storage", referenced from: __ZNSs4_Rep20_S_empty_rep_storageE$non_lazy_ptr in OligoKernel.cpp.o "___cxa_get_exception_ptr", referenced from: sg(_object*, _object*)in PythonInterface.cpp.o sg(_object*, _object*)in PythonInterface.cpp.o "std::__throw_bad_alloc()", referenced from: std::vector >::_M_fill_insert(__gnu_cxx::__normal_iterator > >, unsigned long, double const&)in OligoKernel.cpp.o void std::_Construct, std::allocator > >, std::vector, std::allocator > > >(std::vector, std::allocator > >*, std::vector, std::allocator > > const&)in OligoKernel.cpp.o std::vector, std::allocator > >::_M_fill_insert(__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned long, std::pair const&)in OligoKernel.cpp.o std::vector, std::allocator > >::operator=(std::vector, std::allocator > > const&)in OligoKernel.cpp.o std::vector, std::allocator > >, std::allocator, std::allocator > > > >::_M_fill_insert(__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, unsigned long, std::vector, std::allocator > > const&)in OligoKernel.cpp.o std::vector, std::allocator > >, std::allocator, std::allocator > > > >::_M_fill_insert(__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, unsigned long, std::vector, std::allocator > > const&)in OligoKernel.cpp.o "vtable for __cxxabiv1::__class_type_info", referenced from: typeinfo for CSGObjectin Classifier.cpp.o typeinfo for CSGObjectin gmnplib.cpp.o typeinfo for CSGObjectin gnpplib.cpp.o typeinfo for CSGObjectin gpdt.cpp.o typeinfo for CSGObjectin MPDSVM.cpp.o typeinfo for CSGObjectin qpbsvmlib.cpp.o typeinfo for Solverin SVM_libsvm.cpp.o typeinfo for QMatrixin SVM_libsvm.cpp.o typeinfo for functionin SVM_linear.cpp.o typeinfo for CSGObjectin Tron.cpp.o typeinfo for CSGObjectin Distance.cpp.o typeinfo for CSGObjectin Distribution.cpp.o typeinfo for CModelin HMM.cpp.o typeinfo for CSGObjectin PerformanceMeasures.cpp.o typeinfo for CSGObjectin Alphabet.cpp.o typeinfo for CSGObjectin Features.cpp.o typeinfo for CSGObjectin FKFeatures.cpp.o typeinfo for CSGObjectin Labels.cpp.o typeinfo for CSGObjectin RealFileFeatures.cpp.o typeinfo for CSGObjectin TOPFeatures.cpp.o typeinfo for CSGObjectin GUIClassifier.cpp.o typeinfo for CSGObjectin GUIDistance.cpp.o typeinfo for CSGObjectin GUIFeatures.cpp.o typeinfo for CSGObjectin GUIHMM.cpp.o typeinfo for CSGObjectin GUIKernel.cpp.o typeinfo for CSGObjectin GUILabels.cpp.o typeinfo for CSGObjectin GUIMath.cpp.o typeinfo for CSGObjectin GUIPluginEstimate.cpp.o typeinfo for CSGObjectin GUIPreProc.cpp.o typeinfo for CSGObjectin GUIStructure.cpp.o typeinfo for CSGObjectin GUITime.cpp.o typeinfo for ShogunExceptionin PythonInterface.cpp.o typeinfo for CSGObjectin SGInterface.cpp.o typeinfo for CSGObjectin CommUlongStringKernel.cpp.o typeinfo for CSGObjectin CommWordStringKernel.cpp.o typeinfo for CSGObjectin FixedDegreeStringKernel.cpp.o typeinfo for CSGObjectin Kernel.cpp.o typeinfo for CSGObjectin MatchWordStringKernel.cpp.o typeinfo for CSGObjectin OligoKernel.cpp.o typeinfo for CSGObjectin PolyKernel.cpp.o typeinfo for CSGObjectin PolyMatchStringKernel.cpp.o typeinfo for CSGObjectin PolyMatchWordStringKernel.cpp.o typeinfo for CSGObjectin SparsePolyKernel.cpp.o typeinfo for CSGObjectin WeightedDegreePositionStringKernel.cpp.o typeinfo for CSGObjectin WeightedDegreeStringKernel.cpp.o typeinfo for CSGObjectin File.cpp.o typeinfo for ShogunExceptionin io.cpp.o typeinfo for CSGObjectin Mathematics.cpp.o typeinfo for ShogunExceptionin memory.cpp.o typeinfo for CSGObjectin Signal.cpp.o typeinfo for CSGObjectin Time.cpp.o typeinfo for CSGObjectin PCACut.cpp.o typeinfo for CSGObjectin PreProc.cpp.o typeinfo for CSGObjectin PruneVarSubMean.cpp.o typeinfo for CSGObjectin DynProg.cpp.o typeinfo for CSGObjectin Plif.cpp.o typeinfo for CSGObjectin PlifArray.cpp.o "std::basic_string, std::allocator >::basic_string(char const*, unsigned long, std::allocator const&)", referenced from: COligoKernel::compute(int, int)in OligoKernel.cpp.o COligoKernel::compute(int, int)in OligoKernel.cpp.o "___cxa_free_exception", referenced from: CIO::message(EMessageType, char const*, ...) constin io.cpp.o operator new(unsigned long)in memory.cpp.o operator new[](unsigned long)in memory.cpp.o "vtable for std::bad_alloc", referenced from: __ZTVSt9bad_alloc$non_lazy_ptr in PythonInterface.cpp.o "std::bad_alloc::~bad_alloc()", referenced from: sg(_object*, _object*)in PythonInterface.cpp.o sg(_object*, _object*)in PythonInterface.cpp.o "___cxa_call_unexpected", referenced from: operator new(unsigned long)in memory.cpp.o "___cxa_throw", referenced from: CIO::message(EMessageType, char const*, ...) constin io.cpp.o operator new(unsigned long)in memory.cpp.o operator new[](unsigned long)in memory.cpp.o "std::_Rb_tree_increment(std::_Rb_tree_node_base*)", referenced from: std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::insert_unique(std::_Rb_tree_iterator >, std::pair const&)in OligoKernel.cpp.o "___cxa_rethrow", referenced from: void std::__uninitialized_fill_n_aux<__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, unsigned long, std::vector, std::allocator > > >(__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, unsigned long, std::vector, std::allocator > > const&, __false_type)in OligoKernel.cpp.o std::vector, std::allocator > >, std::allocator, std::allocator > > > >::_M_fill_insert(__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, unsigned long, std::vector, std::allocator > > const&)in OligoKernel.cpp.o std::vector, std::allocator > >, std::allocator, std::allocator > > > >::_M_fill_insert(__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, unsigned long, std::vector, std::allocator > > const&)in OligoKernel.cpp.o std::vector, std::allocator > >, std::allocator, std::allocator > > > >::_M_fill_insert(__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, unsigned long, std::vector, std::allocator > > const&)in OligoKernel.cpp.o std::vector, std::allocator > >, std::allocator, std::allocator > > > >::_M_fill_insert(__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, unsigned long, std::vector, std::allocator > > const&)in OligoKernel.cpp.o std::vector, std::allocator > >, std::allocator, std::allocator > > > >::_M_fill_insert(__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, unsigned long, std::vector, std::allocator > > const&)in OligoKernel.cpp.o std::vector, std::allocator > >, std::allocator, std::allocator > > > >::_M_fill_insert(__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, unsigned long, std::vector, std::allocator > > const&)in OligoKernel.cpp.o "typeinfo for std::bad_alloc", referenced from: GCC_except_table0 in PythonInterface.cpp.o GCC_except_table0 in memory.cpp.o "std::ios_base::Init::Init()", referenced from: __static_initialization_and_destruction_0(int, int)in OligoKernel.cpp.o "std::ios_base::Init::~Init()", referenced from: ___tcf_0 in OligoKernel.cpp.o "___cxa_guard_release", referenced from: CWeightedDegreePositionStringKernel::compute_POIM(int, int&, int&, double*, int, int*, double*, double*)in WeightedDegreePositionStringKernel.cpp.o CWeightedDegreePositionStringKernel::extract_w(int, int&, int&, double*, int, int*, double*)in WeightedDegreePositionStringKernel.cpp.o "___cxa_allocate_exception", referenced from: CIO::message(EMessageType, char const*, ...) constin io.cpp.o operator new(unsigned long)in memory.cpp.o operator new(unsigned long)in memory.cpp.o operator new[](unsigned long)in memory.cpp.o operator new[](unsigned long)in memory.cpp.o "operator delete(void*, std::nothrow_t const&)", referenced from: COligoKernel::encodeOligo(std::basic_string, std::allocator > const&, unsigned int, std::basic_string, std::allocator > const&, std::vector, std::allocator > >&)in OligoKernel.cpp.o COligoKernel::encodeOligo(std::basic_string, std::allocator > const&, unsigned int, std::basic_string, std::allocator > const&, std::vector, std::allocator > >&)in OligoKernel.cpp.o "___gxx_personality_v0", referenced from: ___gxx_personality_v0$non_lazy_ptr in SGObject.cpp.o ___gxx_personality_v0$non_lazy_ptr in Classifier.cpp.o ___gxx_personality_v0$non_lazy_ptr in KernelPerceptron.cpp.o ___gxx_personality_v0$non_lazy_ptr in KNN.cpp.o ___gxx_personality_v0$non_lazy_ptr in LDA.cpp.o ___gxx_personality_v0$non_lazy_ptr in LinearClassifier.cpp.o ___gxx_personality_v0$non_lazy_ptr in Perceptron.cpp.o ___gxx_personality_v0$non_lazy_ptr in PluginEstimate.cpp.o ___gxx_personality_v0$non_lazy_ptr in SparseLinearClassifier.cpp.o ___gxx_personality_v0$non_lazy_ptr in gmnplib.cpp.o ___gxx_personality_v0$non_lazy_ptr in GMNPSVM.cpp.o ___gxx_personality_v0$non_lazy_ptr in gnpplib.cpp.o ___gxx_personality_v0$non_lazy_ptr in GNPPSVM.cpp.o ___gxx_personality_v0$non_lazy_ptr in GPBTSVM.cpp.o ___gxx_personality_v0$non_lazy_ptr in gpdt.cpp.o ___gxx_personality_v0$non_lazy_ptr in gpdtsolve.cpp.o ___gxx_personality_v0$non_lazy_ptr in gpm.cpp.o ___gxx_personality_v0$non_lazy_ptr in LibLinear.cpp.o ___gxx_personality_v0$non_lazy_ptr in libocas.cpp.o ___gxx_personality_v0$non_lazy_ptr in LibSVM.cpp.o ___gxx_personality_v0$non_lazy_ptr in LibSVMMultiClass.cpp.o ___gxx_personality_v0$non_lazy_ptr in LibSVMOneClass.cpp.o ___gxx_personality_v0$non_lazy_ptr in MPDSVM.cpp.o ___gxx_personality_v0$non_lazy_ptr in MultiClassSVM.cpp.o ___gxx_personality_v0$non_lazy_ptr in Optimizer.cpp.o ___gxx_personality_v0$non_lazy_ptr in pr_loqo.cpp.o ___gxx_personality_v0$non_lazy_ptr in qpbsvmlib.cpp.o ___gxx_personality_v0$non_lazy_ptr in qpssvmlib.cpp.o ___gxx_personality_v0$non_lazy_ptr in ssl.cpp.o ___gxx_personality_v0$non_lazy_ptr in SubGradientSVM.cpp.o ___gxx_personality_v0$non_lazy_ptr in SVM.cpp.o ___gxx_personality_v0$non_lazy_ptr in SVM_libsvm.cpp.o ___gxx_personality_v0$non_lazy_ptr in SVM_linear.cpp.o ___gxx_personality_v0$non_lazy_ptr in SVMLin.cpp.o ___gxx_personality_v0$non_lazy_ptr in SVMOcas.cpp.o ___gxx_personality_v0$non_lazy_ptr in SVMSGD.cpp.o ___gxx_personality_v0$non_lazy_ptr in Tron.cpp.o ___gxx_personality_v0$non_lazy_ptr in WDSVMOcas.cpp.o ___gxx_personality_v0$non_lazy_ptr in Hierarchical.cpp.o ___gxx_personality_v0$non_lazy_ptr in KMeans.cpp.o ___gxx_personality_v0$non_lazy_ptr in BrayCurtisDistance.cpp.o ___gxx_personality_v0$non_lazy_ptr in CanberraMetric.cpp.o ___gxx_personality_v0$non_lazy_ptr in CanberraWordDistance.cpp.o ___gxx_personality_v0$non_lazy_ptr in ChebyshewMetric.cpp.o ___gxx_personality_v0$non_lazy_ptr in ChiSquareDistance.cpp.o ___gxx_personality_v0$non_lazy_ptr in CosineDistance.cpp.o ___gxx_personality_v0$non_lazy_ptr in Distance.cpp.o ___gxx_personality_v0$non_lazy_ptr in DistanceMachine.cpp.o ___gxx_personality_v0$non_lazy_ptr in EuclidianDistance.cpp.o ___gxx_personality_v0$non_lazy_ptr in GeodesicMetric.cpp.o ___gxx_personality_v0$non_lazy_ptr in HammingWordDistance.cpp.o ___gxx_personality_v0$non_lazy_ptr in JensenMetric.cpp.o ___gxx_personality_v0$non_lazy_ptr in ManhattanMetric.cpp.o ___gxx_personality_v0$non_lazy_ptr in ManhattanWordDistance.cpp.o ___gxx_personality_v0$non_lazy_ptr in MinkowskiMetric.cpp.o ___gxx_personality_v0$non_lazy_ptr in SparseEuclidianDistance.cpp.o ___gxx_personality_v0$non_lazy_ptr in TanimotoDistance.cpp.o ___gxx_personality_v0$non_lazy_ptr in Distribution.cpp.o ___gxx_personality_v0$non_lazy_ptr in Histogram.cpp.o ___gxx_personality_v0$non_lazy_ptr in GHMM.cpp.o ___gxx_personality_v0$non_lazy_ptr in HMM.cpp.o ___gxx_personality_v0$non_lazy_ptr in LinearHMM.cpp.o ___gxx_personality_v0$non_lazy_ptr in PerformanceMeasures.cpp.o ___gxx_personality_v0$non_lazy_ptr in Alphabet.cpp.o ___gxx_personality_v0$non_lazy_ptr in ByteFeatures.cpp.o ___gxx_personality_v0$non_lazy_ptr in CharFeatures.cpp.o ___gxx_personality_v0$non_lazy_ptr in CombinedFeatures.cpp.o ___gxx_personality_v0$non_lazy_ptr in Features.cpp.o ___gxx_personality_v0$non_lazy_ptr in FKFeatures.cpp.o ___gxx_personality_v0$non_lazy_ptr in IntFeatures.cpp.o ___gxx_personality_v0$non_lazy_ptr in Labels.cpp.o ___gxx_personality_v0$non_lazy_ptr in RealFeatures.cpp.o ___gxx_personality_v0$non_lazy_ptr in RealFileFeatures.cpp.o ___gxx_personality_v0$non_lazy_ptr in ShortFeatures.cpp.o ___gxx_personality_v0$non_lazy_ptr in ShortRealFeatures.cpp.o ___gxx_personality_v0$non_lazy_ptr in TOPFeatures.cpp.o ___gxx_personality_v0$non_lazy_ptr in WordFeatures.cpp.o ___gxx_personality_v0$non_lazy_ptr in GUIClassifier.cpp.o ___gxx_personality_v0$non_lazy_ptr in GUIDistance.cpp.o ___gxx_personality_v0$non_lazy_ptr in GUIFeatures.cpp.o ___gxx_personality_v0$non_lazy_ptr in GUIHMM.cpp.o ___gxx_personality_v0$non_lazy_ptr in GUIKernel.cpp.o ___gxx_personality_v0$non_lazy_ptr in GUILabels.cpp.o ___gxx_personality_v0$non_lazy_ptr in GUIMath.cpp.o ___gxx_personality_v0$non_lazy_ptr in GUIPluginEstimate.cpp.o ___gxx_personality_v0$non_lazy_ptr in GUIPreProc.cpp.o ___gxx_personality_v0$non_lazy_ptr in GUIStructure.cpp.o ___gxx_personality_v0$non_lazy_ptr in GUITime.cpp.o ___gxx_personality_v0$non_lazy_ptr in PythonInterface.cpp.o ___gxx_personality_v0$non_lazy_ptr in SGInterface.cpp.o ___gxx_personality_v0$non_lazy_ptr in AUCKernel.cpp.o ___gxx_personality_v0$non_lazy_ptr in Chi2Kernel.cpp.o ___gxx_personality_v0$non_lazy_ptr in CombinedKernel.cpp.o ___gxx_personality_v0$non_lazy_ptr in CommUlongStringKernel.cpp.o ___gxx_personality_v0$non_lazy_ptr in CommWordStringKernel.cpp.o ___gxx_personality_v0$non_lazy_ptr in ConstKernel.cpp.o ___gxx_personality_v0$non_lazy_ptr in CustomKernel.cpp.o ___gxx_personality_v0$non_lazy_ptr in DiagKernel.cpp.o ___gxx_personality_v0$non_lazy_ptr in DistanceKernel.cpp.o ___gxx_personality_v0$non_lazy_ptr in FixedDegreeStringKernel.cpp.o ___gxx_personality_v0$non_lazy_ptr in GaussianKernel.cpp.o ___gxx_personality_v0$non_lazy_ptr in GaussianShiftKernel.cpp.o ___gxx_personality_v0$non_lazy_ptr in GaussianShortRealKernel.cpp.o ___gxx_personality_v0$non_lazy_ptr in HistogramWordStringKernel.cpp.o ___gxx_personality_v0$non_lazy_ptr in Kernel.cpp.o ___gxx_personality_v0$non_lazy_ptr in KernelMachine.cpp.o ___gxx_personality_v0$non_lazy_ptr in LinearByteKernel.cpp.o ___gxx_personality_v0$non_lazy_ptr in LinearKernel.cpp.o ___gxx_personality_v0$non_lazy_ptr in LinearStringKernel.cpp.o ___gxx_personality_v0$non_lazy_ptr in LinearWordKernel.cpp.o ___gxx_personality_v0$non_lazy_ptr in LocalAlignmentStringKernel.cpp.o ___gxx_personality_v0$non_lazy_ptr in LocalityImprovedStringKernel.cpp.o ___gxx_personality_v0$non_lazy_ptr in MatchWordStringKernel.cpp.o ___gxx_personality_v0$non_lazy_ptr in OligoKernel.cpp.o ___gxx_personality_v0$non_lazy_ptr in PolyKernel.cpp.o ___gxx_personality_v0$non_lazy_ptr in PolyMatchStringKernel.cpp.o ___gxx_personality_v0$non_lazy_ptr in PolyMatchWordStringKernel.cpp.o ___gxx_personality_v0$non_lazy_ptr in PyramidChi2.cpp.o ___gxx_personality_v0$non_lazy_ptr in SalzbergWordStringKernel.cpp.o ___gxx_personality_v0$non_lazy_ptr in SigmoidKernel.cpp.o ___gxx_personality_v0$non_lazy_ptr in SimpleLocalityImprovedStringKernel.cpp.o ___gxx_personality_v0$non_lazy_ptr in SparseGaussianKernel.cpp.o ___gxx_personality_v0$non_lazy_ptr in SparseLinearKernel.cpp.o ___gxx_personality_v0$non_lazy_ptr in SparsePolyKernel.cpp.o ___gxx_personality_v0$non_lazy_ptr in WeightedCommWordStringKernel.cpp.o ___gxx_personality_v0$non_lazy_ptr in WeightedDegreePositionStringKernel.cpp.o ___gxx_personality_v0$non_lazy_ptr in WeightedDegreeStringKernel.cpp.o ___gxx_personality_v0$non_lazy_ptr in File.cpp.o ___gxx_personality_v0$non_lazy_ptr in io.cpp.o ___gxx_personality_v0$non_lazy_ptr in lapack.cpp.o ___gxx_personality_v0$non_lazy_ptr in Mathematics.cpp.o ___gxx_personality_v0$non_lazy_ptr in memory.cpp.o ___gxx_personality_v0$non_lazy_ptr in ShogunException.cpp.o ___gxx_personality_v0$non_lazy_ptr in Signal.cpp.o ___gxx_personality_v0$non_lazy_ptr in Time.cpp.o ___gxx_personality_v0$non_lazy_ptr in Trie.cpp.o ___gxx_personality_v0$non_lazy_ptr in LogPlusOne.cpp.o ___gxx_personality_v0$non_lazy_ptr in NormDerivativeLem3.cpp.o ___gxx_personality_v0$non_lazy_ptr in NormOne.cpp.o ___gxx_personality_v0$non_lazy_ptr in PCACut.cpp.o ___gxx_personality_v0$non_lazy_ptr in PreProc.cpp.o ___gxx_personality_v0$non_lazy_ptr in PruneVarSubMean.cpp.o ___gxx_personality_v0$non_lazy_ptr in SortUlongString.cpp.o ___gxx_personality_v0$non_lazy_ptr in SortWordString.cpp.o ___gxx_personality_v0$non_lazy_ptr in KRR.cpp.o ___gxx_personality_v0$non_lazy_ptr in LibSVR.cpp.o ___gxx_personality_v0$non_lazy_ptr in DynProg.cpp.o ___gxx_personality_v0$non_lazy_ptr in Plif.cpp.o ___gxx_personality_v0$non_lazy_ptr in PlifArray.cpp.o "___cxa_pure_virtual", referenced from: vtable for Kernelin SVM_libsvm.cpp.o vtable for Kernelin SVM_libsvm.cpp.o vtable for QMatrixin SVM_libsvm.cpp.o vtable for QMatrixin SVM_libsvm.cpp.o vtable for QMatrixin SVM_libsvm.cpp.o vtable for functionin SVM_linear.cpp.o vtable for functionin SVM_linear.cpp.o vtable for functionin SVM_linear.cpp.o vtable for functionin SVM_linear.cpp.o vtable for CSimpleDistancein BrayCurtisDistance.cpp.o vtable for CSimpleDistancein BrayCurtisDistance.cpp.o vtable for CSimpleDistancein BrayCurtisDistance.cpp.o vtable for CSimpleDistancein BrayCurtisDistance.cpp.o vtable for CSimpleDistancein BrayCurtisDistance.cpp.o vtable for CSimpleDistancein BrayCurtisDistance.cpp.o vtable for CSimpleDistancein CanberraMetric.cpp.o vtable for CSimpleDistancein CanberraMetric.cpp.o vtable for CSimpleDistancein CanberraMetric.cpp.o vtable for CSimpleDistancein CanberraMetric.cpp.o vtable for CSimpleDistancein CanberraMetric.cpp.o vtable for CSimpleDistancein CanberraMetric.cpp.o vtable for CStringDistancein CanberraWordDistance.cpp.o vtable for CStringDistancein CanberraWordDistance.cpp.o vtable for CStringDistancein CanberraWordDistance.cpp.o vtable for CStringDistancein CanberraWordDistance.cpp.o vtable for CStringDistancein CanberraWordDistance.cpp.o vtable for CStringDistancein CanberraWordDistance.cpp.o vtable for CSimpleDistancein ChebyshewMetric.cpp.o vtable for CSimpleDistancein ChebyshewMetric.cpp.o vtable for CSimpleDistancein ChebyshewMetric.cpp.o vtable for CSimpleDistancein ChebyshewMetric.cpp.o vtable for CSimpleDistancein ChebyshewMetric.cpp.o vtable for CSimpleDistancein ChebyshewMetric.cpp.o vtable for CSimpleDistancein ChiSquareDistance.cpp.o vtable for CSimpleDistancein ChiSquareDistance.cpp.o vtable for CSimpleDistancein ChiSquareDistance.cpp.o vtable for CSimpleDistancein ChiSquareDistance.cpp.o vtable for CSimpleDistancein ChiSquareDistance.cpp.o vtable for CSimpleDistancein ChiSquareDistance.cpp.o vtable for CSimpleDistancein CosineDistance.cpp.o vtable for CSimpleDistancein CosineDistance.cpp.o vtable for CSimpleDistancein CosineDistance.cpp.o vtable for CSimpleDistancein CosineDistance.cpp.o vtable for CSimpleDistancein CosineDistance.cpp.o vtable for CSimpleDistancein CosineDistance.cpp.o vtable for CDistancein Distance.cpp.o vtable for CDistancein Distance.cpp.o vtable for CDistancein Distance.cpp.o vtable for CDistancein Distance.cpp.o vtable for CDistancein Distance.cpp.o vtable for CDistancein Distance.cpp.o vtable for CDistancein Distance.cpp.o vtable for CDistancein Distance.cpp.o vtable for CRealDistancein EuclidianDistance.cpp.o vtable for CRealDistancein EuclidianDistance.cpp.o vtable for CRealDistancein EuclidianDistance.cpp.o vtable for CRealDistancein EuclidianDistance.cpp.o vtable for CRealDistancein EuclidianDistance.cpp.o vtable for CRealDistancein EuclidianDistance.cpp.o vtable for CSimpleDistancein EuclidianDistance.cpp.o vtable for CSimpleDistancein EuclidianDistance.cpp.o vtable for CSimpleDistancein EuclidianDistance.cpp.o vtable for CSimpleDistancein EuclidianDistance.cpp.o vtable for CSimpleDistancein EuclidianDistance.cpp.o vtable for CSimpleDistancein EuclidianDistance.cpp.o vtable for CSimpleDistancein GeodesicMetric.cpp.o vtable for CSimpleDistancein GeodesicMetric.cpp.o vtable for CSimpleDistancein GeodesicMetric.cpp.o vtable for CSimpleDistancein GeodesicMetric.cpp.o vtable for CSimpleDistancein GeodesicMetric.cpp.o vtable for CSimpleDistancein GeodesicMetric.cpp.o vtable for CStringDistancein HammingWordDistance.cpp.o vtable for CStringDistancein HammingWordDistance.cpp.o vtable for CStringDistancein HammingWordDistance.cpp.o vtable for CStringDistancein HammingWordDistance.cpp.o vtable for CStringDistancein HammingWordDistance.cpp.o vtable for CStringDistancein HammingWordDistance.cpp.o vtable for CSimpleDistancein JensenMetric.cpp.o vtable for CSimpleDistancein JensenMetric.cpp.o vtable for CSimpleDistancein JensenMetric.cpp.o vtable for CSimpleDistancein JensenMetric.cpp.o vtable for CSimpleDistancein JensenMetric.cpp.o vtable for CSimpleDistancein JensenMetric.cpp.o vtable for CSimpleDistancein ManhattanMetric.cpp.o vtable for CSimpleDistancein ManhattanMetric.cpp.o vtable for CSimpleDistancein ManhattanMetric.cpp.o vtable for CSimpleDistancein ManhattanMetric.cpp.o vtable for CSimpleDistancein ManhattanMetric.cpp.o vtable for CSimpleDistancein ManhattanMetric.cpp.o vtable for CStringDistancein ManhattanWordDistance.cpp.o vtable for CStringDistancein ManhattanWordDistance.cpp.o vtable for CStringDistancein ManhattanWordDistance.cpp.o vtable for CStringDistancein ManhattanWordDistance.cpp.o vtable for CStringDistancein ManhattanWordDistance.cpp.o vtable for CStringDistancein ManhattanWordDistance.cpp.o vtable for CSimpleDistancein MinkowskiMetric.cpp.o vtable for CSimpleDistancein MinkowskiMetric.cpp.o vtable for CSimpleDistancein MinkowskiMetric.cpp.o vtable for CSimpleDistancein MinkowskiMetric.cpp.o vtable for CSimpleDistancein MinkowskiMetric.cpp.o vtable for CSimpleDistancein MinkowskiMetric.cpp.o vtable for CSparseDistancein SparseEuclidianDistance.cpp.o vtable for CSparseDistancein SparseEuclidianDistance.cpp.o vtable for CSparseDistancein SparseEuclidianDistance.cpp.o vtable for CSparseDistancein SparseEuclidianDistance.cpp.o vtable for CSparseDistancein SparseEuclidianDistance.cpp.o vtable for CSparseDistancein SparseEuclidianDistance.cpp.o vtable for CSimpleDistancein TanimotoDistance.cpp.o vtable for CSimpleDistancein TanimotoDistance.cpp.o vtable for CSimpleDistancein TanimotoDistance.cpp.o vtable for CSimpleDistancein TanimotoDistance.cpp.o vtable for CSimpleDistancein TanimotoDistance.cpp.o vtable for CSimpleDistancein TanimotoDistance.cpp.o vtable for CDistributionin Distribution.cpp.o vtable for CDistributionin Distribution.cpp.o vtable for CDistributionin Distribution.cpp.o vtable for CDistributionin Distribution.cpp.o vtable for CDistributionin Distribution.cpp.o vtable for CFeaturesin Features.cpp.o vtable for CFeaturesin Features.cpp.o vtable for CFeaturesin Features.cpp.o vtable for CFeaturesin Features.cpp.o vtable for CFeaturesin Features.cpp.o vtable for CKernelNormalizerin GUIKernel.cpp.o vtable for CKernelNormalizerin GUIKernel.cpp.o vtable for CKernelNormalizerin GUIKernel.cpp.o vtable for CKernelNormalizerin GUIKernel.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSGInterfacein SGInterface.cpp.o vtable for CSimpleKernelin AUCKernel.cpp.o vtable for CSimpleKernelin AUCKernel.cpp.o vtable for CSimpleKernelin AUCKernel.cpp.o vtable for CSimpleKernelin AUCKernel.cpp.o vtable for CSimpleKernelin AUCKernel.cpp.o vtable for CSimpleKernelin Chi2Kernel.cpp.o vtable for CSimpleKernelin Chi2Kernel.cpp.o vtable for CSimpleKernelin Chi2Kernel.cpp.o vtable for CSimpleKernelin Chi2Kernel.cpp.o vtable for CSimpleKernelin Chi2Kernel.cpp.o vtable for CStringKernelin CommUlongStringKernel.cpp.o vtable for CStringKernelin CommUlongStringKernel.cpp.o vtable for CStringKernelin CommUlongStringKernel.cpp.o vtable for CStringKernelin CommUlongStringKernel.cpp.o vtable for CStringKernelin CommUlongStringKernel.cpp.o vtable for CKernelNormalizerin CommUlongStringKernel.cpp.o vtable for CKernelNormalizerin CommUlongStringKernel.cpp.o vtable for CKernelNormalizerin CommUlongStringKernel.cpp.o vtable for CKernelNormalizerin CommUlongStringKernel.cpp.o vtable for CStringKernelin CommWordStringKernel.cpp.o vtable for CStringKernelin CommWordStringKernel.cpp.o vtable for CStringKernelin CommWordStringKernel.cpp.o vtable for CStringKernelin CommWordStringKernel.cpp.o vtable for CStringKernelin CommWordStringKernel.cpp.o vtable for CKernelNormalizerin CommWordStringKernel.cpp.o vtable for CKernelNormalizerin CommWordStringKernel.cpp.o vtable for CKernelNormalizerin CommWordStringKernel.cpp.o vtable for CKernelNormalizerin CommWordStringKernel.cpp.o vtable for CStringKernelin FixedDegreeStringKernel.cpp.o vtable for CStringKernelin FixedDegreeStringKernel.cpp.o vtable for CStringKernelin FixedDegreeStringKernel.cpp.o vtable for CStringKernelin FixedDegreeStringKernel.cpp.o vtable for CStringKernelin FixedDegreeStringKernel.cpp.o vtable for CKernelNormalizerin FixedDegreeStringKernel.cpp.o vtable for CKernelNormalizerin FixedDegreeStringKernel.cpp.o vtable for CKernelNormalizerin FixedDegreeStringKernel.cpp.o vtable for CKernelNormalizerin FixedDegreeStringKernel.cpp.o vtable for CSimpleKernelin GaussianKernel.cpp.o vtable for CSimpleKernelin GaussianKernel.cpp.o vtable for CSimpleKernelin GaussianKernel.cpp.o vtable for CSimpleKernelin GaussianKernel.cpp.o vtable for CSimpleKernelin GaussianKernel.cpp.o vtable for CSimpleKernelin GaussianShortRealKernel.cpp.o vtable for CSimpleKernelin GaussianShortRealKernel.cpp.o vtable for CSimpleKernelin GaussianShortRealKernel.cpp.o vtable for CSimpleKernelin GaussianShortRealKernel.cpp.o vtable for CSimpleKernelin GaussianShortRealKernel.cpp.o vtable for CStringKernelin HistogramWordStringKernel.cpp.o vtable for CStringKernelin HistogramWordStringKernel.cpp.o vtable for CStringKernelin HistogramWordStringKernel.cpp.o vtable for CStringKernelin HistogramWordStringKernel.cpp.o vtable for CStringKernelin HistogramWordStringKernel.cpp.o vtable for CKernelin Kernel.cpp.o vtable for CKernelin Kernel.cpp.o vtable for CKernelin Kernel.cpp.o vtable for CKernelin Kernel.cpp.o vtable for CKernelin Kernel.cpp.o vtable for CKernelin Kernel.cpp.o vtable for CKernelin Kernel.cpp.o vtable for CKernelNormalizerin Kernel.cpp.o vtable for CKernelNormalizerin Kernel.cpp.o vtable for CKernelNormalizerin Kernel.cpp.o vtable for CKernelNormalizerin Kernel.cpp.o vtable for CSimpleKernelin LinearByteKernel.cpp.o vtable for CSimpleKernelin LinearByteKernel.cpp.o vtable for CSimpleKernelin LinearByteKernel.cpp.o vtable for CSimpleKernelin LinearByteKernel.cpp.o vtable for CSimpleKernelin LinearByteKernel.cpp.o vtable for CSimpleKernelin LinearKernel.cpp.o vtable for CSimpleKernelin LinearKernel.cpp.o vtable for CSimpleKernelin LinearKernel.cpp.o vtable for CSimpleKernelin LinearKernel.cpp.o vtable for CSimpleKernelin LinearKernel.cpp.o vtable for CStringKernelin LinearStringKernel.cpp.o vtable for CStringKernelin LinearStringKernel.cpp.o vtable for CStringKernelin LinearStringKernel.cpp.o vtable for CStringKernelin LinearStringKernel.cpp.o vtable for CStringKernelin LinearStringKernel.cpp.o vtable for CSimpleKernelin LinearWordKernel.cpp.o vtable for CSimpleKernelin LinearWordKernel.cpp.o vtable for CSimpleKernelin LinearWordKernel.cpp.o vtable for CSimpleKernelin LinearWordKernel.cpp.o vtable for CSimpleKernelin LinearWordKernel.cpp.o vtable for CStringKernelin LocalAlignmentStringKernel.cpp.o vtable for CStringKernelin LocalAlignmentStringKernel.cpp.o vtable for CStringKernelin LocalAlignmentStringKernel.cpp.o vtable for CStringKernelin LocalAlignmentStringKernel.cpp.o vtable for CStringKernelin LocalAlignmentStringKernel.cpp.o vtable for CStringKernelin LocalityImprovedStringKernel.cpp.o vtable for CStringKernelin LocalityImprovedStringKernel.cpp.o vtable for CStringKernelin LocalityImprovedStringKernel.cpp.o vtable for CStringKernelin LocalityImprovedStringKernel.cpp.o vtable for CStringKernelin LocalityImprovedStringKernel.cpp.o vtable for CStringKernelin MatchWordStringKernel.cpp.o vtable for CStringKernelin MatchWordStringKernel.cpp.o vtable for CStringKernelin MatchWordStringKernel.cpp.o vtable for CStringKernelin MatchWordStringKernel.cpp.o vtable for CStringKernelin MatchWordStringKernel.cpp.o vtable for CKernelNormalizerin MatchWordStringKernel.cpp.o vtable for CKernelNormalizerin MatchWordStringKernel.cpp.o vtable for CKernelNormalizerin MatchWordStringKernel.cpp.o vtable for CKernelNormalizerin MatchWordStringKernel.cpp.o vtable for CStringKernelin OligoKernel.cpp.o vtable for CStringKernelin OligoKernel.cpp.o vtable for CStringKernelin OligoKernel.cpp.o vtable for CStringKernelin OligoKernel.cpp.o vtable for CStringKernelin OligoKernel.cpp.o vtable for CKernelNormalizerin OligoKernel.cpp.o vtable for CKernelNormalizerin OligoKernel.cpp.o vtable for CKernelNormalizerin OligoKernel.cpp.o vtable for CKernelNormalizerin OligoKernel.cpp.o vtable for CSimpleKernelin PolyKernel.cpp.o vtable for CSimpleKernelin PolyKernel.cpp.o vtable for CSimpleKernelin PolyKernel.cpp.o vtable for CSimpleKernelin PolyKernel.cpp.o vtable for CSimpleKernelin PolyKernel.cpp.o vtable for CKernelNormalizerin PolyKernel.cpp.o vtable for CKernelNormalizerin PolyKernel.cpp.o vtable for CKernelNormalizerin PolyKernel.cpp.o vtable for CKernelNormalizerin PolyKernel.cpp.o vtable for CStringKernelin PolyMatchStringKernel.cpp.o vtable for CStringKernelin PolyMatchStringKernel.cpp.o vtable for CStringKernelin PolyMatchStringKernel.cpp.o vtable for CStringKernelin PolyMatchStringKernel.cpp.o vtable for CStringKernelin PolyMatchStringKernel.cpp.o vtable for CKernelNormalizerin PolyMatchStringKernel.cpp.o vtable for CKernelNormalizerin PolyMatchStringKernel.cpp.o vtable for CKernelNormalizerin PolyMatchStringKernel.cpp.o vtable for CKernelNormalizerin PolyMatchStringKernel.cpp.o vtable for CStringKernelin PolyMatchWordStringKernel.cpp.o vtable for CStringKernelin PolyMatchWordStringKernel.cpp.o vtable for CStringKernelin PolyMatchWordStringKernel.cpp.o vtable for CStringKernelin PolyMatchWordStringKernel.cpp.o vtable for CStringKernelin PolyMatchWordStringKernel.cpp.o vtable for CKernelNormalizerin PolyMatchWordStringKernel.cpp.o vtable for CKernelNormalizerin PolyMatchWordStringKernel.cpp.o vtable for CKernelNormalizerin PolyMatchWordStringKernel.cpp.o vtable for CKernelNormalizerin PolyMatchWordStringKernel.cpp.o vtable for CSimpleKernelin PyramidChi2.cpp.o vtable for CSimpleKernelin PyramidChi2.cpp.o vtable for CSimpleKernelin PyramidChi2.cpp.o vtable for CSimpleKernelin PyramidChi2.cpp.o vtable for CSimpleKernelin PyramidChi2.cpp.o vtable for CStringKernelin SalzbergWordStringKernel.cpp.o vtable for CStringKernelin SalzbergWordStringKernel.cpp.o vtable for CStringKernelin SalzbergWordStringKernel.cpp.o vtable for CStringKernelin SalzbergWordStringKernel.cpp.o vtable for CStringKernelin SalzbergWordStringKernel.cpp.o vtable for CSimpleKernelin SigmoidKernel.cpp.o vtable for CSimpleKernelin SigmoidKernel.cpp.o vtable for CSimpleKernelin SigmoidKernel.cpp.o vtable for CSimpleKernelin SigmoidKernel.cpp.o vtable for CSimpleKernelin SigmoidKernel.cpp.o vtable for CStringKernelin SimpleLocalityImprovedStringKernel.cpp.o vtable for CStringKernelin SimpleLocalityImprovedStringKernel.cpp.o vtable for CStringKernelin SimpleLocalityImprovedStringKernel.cpp.o vtable for CStringKernelin SimpleLocalityImprovedStringKernel.cpp.o vtable for CStringKernelin SimpleLocalityImprovedStringKernel.cpp.o vtable for CSparseKernelin SparseGaussianKernel.cpp.o vtable for CSparseKernelin SparseGaussianKernel.cpp.o vtable for CSparseKernelin SparseGaussianKernel.cpp.o vtable for CSparseKernelin SparseGaussianKernel.cpp.o vtable for CSparseKernelin SparseGaussianKernel.cpp.o vtable for CSparseKernelin SparseLinearKernel.cpp.o vtable for CSparseKernelin SparseLinearKernel.cpp.o vtable for CSparseKernelin SparseLinearKernel.cpp.o vtable for CSparseKernelin SparseLinearKernel.cpp.o vtable for CSparseKernelin SparseLinearKernel.cpp.o vtable for CSparseKernelin SparsePolyKernel.cpp.o vtable for CSparseKernelin SparsePolyKernel.cpp.o vtable for CSparseKernelin SparsePolyKernel.cpp.o vtable for CSparseKernelin SparsePolyKernel.cpp.o vtable for CSparseKernelin SparsePolyKernel.cpp.o vtable for CKernelNormalizerin SparsePolyKernel.cpp.o vtable for CKernelNormalizerin SparsePolyKernel.cpp.o vtable for CKernelNormalizerin SparsePolyKernel.cpp.o vtable for CKernelNormalizerin SparsePolyKernel.cpp.o vtable for CStringKernelin WeightedDegreePositionStringKernel.cpp.o vtable for CStringKernelin WeightedDegreePositionStringKernel.cpp.o vtable for CStringKernelin WeightedDegreePositionStringKernel.cpp.o vtable for CStringKernelin WeightedDegreePositionStringKernel.cpp.o vtable for CStringKernelin WeightedDegreePositionStringKernel.cpp.o vtable for CKernelNormalizerin WeightedDegreePositionStringKernel.cpp.o vtable for CKernelNormalizerin WeightedDegreePositionStringKernel.cpp.o vtable for CKernelNormalizerin WeightedDegreePositionStringKernel.cpp.o vtable for CKernelNormalizerin WeightedDegreePositionStringKernel.cpp.o vtable for CStringKernelin WeightedDegreeStringKernel.cpp.o vtable for CStringKernelin WeightedDegreeStringKernel.cpp.o vtable for CStringKernelin WeightedDegreeStringKernel.cpp.o vtable for CStringKernelin WeightedDegreeStringKernel.cpp.o vtable for CStringKernelin WeightedDegreeStringKernel.cpp.o vtable for CKernelNormalizerin WeightedDegreeStringKernel.cpp.o vtable for CKernelNormalizerin WeightedDegreeStringKernel.cpp.o vtable for CKernelNormalizerin WeightedDegreeStringKernel.cpp.o vtable for CKernelNormalizerin WeightedDegreeStringKernel.cpp.o vtable for CSimplePreProcin LogPlusOne.cpp.o vtable for CSimplePreProcin LogPlusOne.cpp.o vtable for CSimplePreProcin LogPlusOne.cpp.o vtable for CSimplePreProcin LogPlusOne.cpp.o vtable for CSimplePreProcin LogPlusOne.cpp.o vtable for CSimplePreProcin LogPlusOne.cpp.o vtable for CNormDerivativeLem3in NormDerivativeLem3.cpp.o vtable for CNormDerivativeLem3in NormDerivativeLem3.cpp.o vtable for CNormDerivativeLem3in NormDerivativeLem3.cpp.o vtable for CSimplePreProcin NormDerivativeLem3.cpp.o vtable for CSimplePreProcin NormDerivativeLem3.cpp.o vtable for CSimplePreProcin NormDerivativeLem3.cpp.o vtable for CSimplePreProcin NormDerivativeLem3.cpp.o vtable for CSimplePreProcin NormDerivativeLem3.cpp.o vtable for CSimplePreProcin NormDerivativeLem3.cpp.o vtable for CSimplePreProcin NormOne.cpp.o vtable for CSimplePreProcin NormOne.cpp.o vtable for CSimplePreProcin NormOne.cpp.o vtable for CSimplePreProcin NormOne.cpp.o vtable for CSimplePreProcin NormOne.cpp.o vtable for CSimplePreProcin NormOne.cpp.o vtable for CSimplePreProcin PCACut.cpp.o vtable for CSimplePreProcin PCACut.cpp.o vtable for CSimplePreProcin PCACut.cpp.o vtable for CSimplePreProcin PCACut.cpp.o vtable for CSimplePreProcin PCACut.cpp.o vtable for CSimplePreProcin PCACut.cpp.o vtable for CPreProcin PreProc.cpp.o vtable for CPreProcin PreProc.cpp.o vtable for CPreProcin PreProc.cpp.o vtable for CPreProcin PreProc.cpp.o vtable for CPreProcin PreProc.cpp.o vtable for CPreProcin PreProc.cpp.o vtable for CSimplePreProcin PruneVarSubMean.cpp.o vtable for CSimplePreProcin PruneVarSubMean.cpp.o vtable for CSimplePreProcin PruneVarSubMean.cpp.o vtable for CSimplePreProcin PruneVarSubMean.cpp.o vtable for CSimplePreProcin PruneVarSubMean.cpp.o vtable for CSimplePreProcin PruneVarSubMean.cpp.o vtable for CStringPreProcin SortUlongString.cpp.o vtable for CStringPreProcin SortUlongString.cpp.o vtable for CStringPreProcin SortUlongString.cpp.o vtable for CStringPreProcin SortUlongString.cpp.o vtable for CStringPreProcin SortUlongString.cpp.o vtable for CStringPreProcin SortUlongString.cpp.o vtable for CStringPreProcin SortWordString.cpp.o vtable for CStringPreProcin SortWordString.cpp.o vtable for CStringPreProcin SortWordString.cpp.o vtable for CStringPreProcin SortWordString.cpp.o vtable for CStringPreProcin SortWordString.cpp.o vtable for CStringPreProcin SortWordString.cpp.o vtable for CPlifBasein Plif.cpp.o vtable for CPlifBasein Plif.cpp.o vtable for CPlifBasein Plif.cpp.o vtable for CPlifBasein Plif.cpp.o vtable for CPlifBasein Plif.cpp.o vtable for CPlifBasein Plif.cpp.o vtable for CPlifBasein Plif.cpp.o vtable for CPlifBasein Plif.cpp.o vtable for CPlifBasein Plif.cpp.o vtable for CPlifBasein PlifArray.cpp.o vtable for CPlifBasein PlifArray.cpp.o vtable for CPlifBasein PlifArray.cpp.o vtable for CPlifBasein PlifArray.cpp.o vtable for CPlifBasein PlifArray.cpp.o vtable for CPlifBasein PlifArray.cpp.o vtable for CPlifBasein PlifArray.cpp.o vtable for CPlifBasein PlifArray.cpp.o vtable for CPlifBasein PlifArray.cpp.o "___cxa_end_catch", referenced from: sg(_object*, _object*)in PythonInterface.cpp.o sg(_object*, _object*)in PythonInterface.cpp.o sg(_object*, _object*)in PythonInterface.cpp.o sg(_object*, _object*)in PythonInterface.cpp.o void std::__uninitialized_fill_n_aux<__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, unsigned long, std::vector, std::allocator > > >(__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, unsigned long, std::vector, std::allocator > > const&, __false_type)in OligoKernel.cpp.o std::vector, std::allocator > >, std::allocator, std::allocator > > > >::_M_fill_insert(__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, unsigned long, std::vector, std::allocator > > const&)in OligoKernel.cpp.o std::vector, std::allocator > >, std::allocator, std::allocator > > > >::_M_fill_insert(__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, unsigned long, std::vector, std::allocator > > const&)in OligoKernel.cpp.o std::vector, std::allocator > >, std::allocator, std::allocator > > > >::_M_fill_insert(__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, unsigned long, std::vector, std::allocator > > const&)in OligoKernel.cpp.o std::vector, std::allocator > >, std::allocator, std::allocator > > > >::_M_fill_insert(__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, unsigned long, std::vector, std::allocator > > const&)in OligoKernel.cpp.o "std::_Rb_tree_insert_and_rebalance(bool, std::_Rb_tree_node_base*, std::_Rb_tree_node_base*, std::_Rb_tree_node_base&)", referenced from: std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::_M_insert(std::_Rb_tree_node_base*, std::_Rb_tree_node_base*, std::pair const&)in OligoKernel.cpp.o ld: symbol(s) not found collect2: ld returned 1 exit status make[1]: *** [sg.so] Error 1 make: *** [just-do-it] Error 2 Error: Target org.macports.build returned: shell command " cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py25-shogun/work/shogun-0.6.7/src" && nice -n 10 make -j2 all " returned error 2 Command output: vtable for CPlifBasein Plif.cpp.o vtable for CPlifBasein Plif.cpp.o vtable for CPlifBasein Plif.cpp.o vtable for CPlifBasein Plif.cpp.o vtable for CPlifBasein Plif.cpp.o vtable for CPlifBasein PlifArray.cpp.o vtable for CPlifBasein PlifArray.cpp.o vtable for CPlifBasein PlifArray.cpp.o vtable for CPlifBasein PlifArray.cpp.o vtable for CPlifBasein PlifArray.cpp.o vtable for CPlifBasein PlifArray.cpp.o vtable for CPlifBasein PlifArray.cpp.o vtable for CPlifBasein PlifArray.cpp.o vtable for CPlifBasein PlifArray.cpp.o "___cxa_end_catch", referenced from: sg(_object*, _object*)in PythonInterface.cpp.o sg(_object*, _object*)in PythonInterface.cpp.o sg(_object*, _object*)in PythonInterface.cpp.o sg(_object*, _object*)in PythonInterface.cpp.o void std::__uninitialized_fill_n_aux<__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, unsigned long, std::vector, std::allocator > > >(__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, unsigned long, std::vector, std::allocator > > const&, __false_type)in OligoKernel.cpp.o std::vector, std::allocator > >, std::allocator, std::allocator > > > >::_M_fill_insert(__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, unsigned long, std::vector, std::allocator > > const&)in OligoKernel.cpp.o std::vector, std::allocator > >, std::allocator, std::allocator > > > >::_M_fill_insert(__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, unsigned long, std::vector, std::allocator > > const&)in OligoKernel.cpp.o std::vector, std::allocator > >, std::allocator, std::allocator > > > >::_M_fill_insert(__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, unsigned long, std::vector, std::allocator > > const&)in OligoKernel.cpp.o std::vector, std::allocator > >, std::allocator, std::allocator > > > >::_M_fill_insert(__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, unsigned long, std::vector, std::allocator > > const&)in OligoKernel.cpp.o "std::_Rb_tree_insert_and_rebalance(bool, std::_Rb_tree_node_base*, std::_Rb_tree_node_base*, std::_Rb_tree_node_base&)", referenced from: std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::_M_insert(std::_Rb_tree_node_base*, std::_Rb_tree_node_base*, std::pair const&)in OligoKernel.cpp.o ld: symbol(s) not found collect2: ld returned 1 exit status make[1]: *** [sg.so] Error 1 make: *** [just-do-it] Error 2 Warning: the following items did not execute (for py25-shogun): org.macports.build Error: Status 1 encountered during processing. localhost:~$