gg:~/atmosphere/UTIL/testpython $ sudo port clean netcdf---> Cleaning netcdf gg:~/atmosphere/UTIL/testpython $ sudo rm /opt/local/var/macports/distfiles/netcdf/netcdf-4.2.tar.gz gg:~/atmosphere/UTIL/testpython $ sudo port selfupdate---> Updating MacPorts base sources using rsync MacPorts base version 2.0.4 installed, MacPorts base version 2.0.4 downloaded. ---> Updating the ports tree ---> MacPorts base is already the latest version The ports tree has been updated. To upgrade your installed ports, you should run port upgrade outdated gg:~/atmosphere/UTIL/testpython $ port upgrade outdated Error: No ports matched the given expression gg:~/atmosphere/UTIL/testpython $ sudo port install netcdf---> Computing dependencies for netcdf ---> Fetching archive for netcdf ---> Attempting to fetch netcdf-4.2_2+dap+netcdf4.darwin_11.x86_64.tbz2 from http://packages.macports.org/netcdf ---> Fetching netcdf ---> Attempting to fetch netcdf-4.2.tar.gz from http://lil.fr.distfiles.macports.org/netcdf ---> Attempting to fetch netcdf-4.2.tar.gz from http://her.gr.distfiles.macports.org/mirrors/macports/mpdistfiles/netcdf ---> Attempting to fetch netcdf-4.2.tar.gz from http://ykf.ca.distfiles.macports.org/MacPorts/mpdistfiles/netcdf ---> Verifying checksum(s) for netcdf Error: Checksum (md5) mismatch for netcdf-4.2.tar.gz Error: Checksum (sha1) mismatch for netcdf-4.2.tar.gz Error: Checksum (rmd160) mismatch for netcdf-4.2.tar.gz Error: Target org.macports.checksum returned: Unable to verify file checksums Log for netcdf is at: /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_netcdf/netcdf/main.log Error: Status 1 encountered during processing. To report a bug, see gg:~/atmosphere/UTIL/testpython $ more /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_netcdf/netcdf/main.log version:1 :debug:main epoch: in tree: 0 installed: 0 :debug:main hdf5-18 1.8.8_0 exists in the ports tree :debug:main hdf5-18 1.8.8_0 is the latest installed :debug:main hdf5-18 1.8.8_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/science/hdf5-18 :debug:main OS darwin/11.3.0 (Mac OS X 10.7) arch i386 :debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided :debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided :debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided :debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main universal variant already exists, so not adding the default one :debug:main No need to upgrade! hdf5-18 1.8.8_0 >= hdf5-18 1.8.8_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main zlib 1.2.6_0 exists in the ports tree :debug:main zlib 1.2.6_0 is the latest installed :debug:main zlib 1.2.6_0 +universal is active :debug:main Merging existing variants '+universal' into variants :debug:main new fully merged portvariants: universal + :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/archivers/zlib :debug:main OS darwin/11.3.0 (Mac OS X 10.7) arch i386 :debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided :debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided :debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided :debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/xcodeversion-1.0.tcl :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Executing variant universal provides universal :debug:main No need to upgrade! zlib 1.2.6_0 >= zlib 1.2.6_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main szip 2.1_4 exists in the ports tree :debug:main szip 2.1_4 is the latest installed :debug:main szip 2.1_4 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/archivers/szip :debug:main OS darwin/11.3.0 (Mac OS X 10.7) arch i386 :debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided :debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided :debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main No need to upgrade! szip 2.1_4 >= szip 2.1_4 :debug:main epoch: in tree: 0 installed: 0 :debug:main curl 7.25.0_1 exists in the ports tree :debug:main curl 7.25.0_1 +ssl is the latest installed :debug:main curl 7.25.0_1 +ssl is active :debug:main Merging existing variants '+ssl' into variants :debug:main new fully merged portvariants: ssl + :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/net/curl :debug:main OS darwin/11.3.0 (Mac OS X 10.7) arch i386 :debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided :debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided :debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided :debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/archcheck-1.0.tcl :debug:main universal variant already exists, so not adding the default one :debug:main Executing variant ssl provides ssl :debug:main No need to upgrade! curl 7.25.0_1 >= curl 7.25.0_1 :debug:main epoch: in tree: 0 installed: 0 :debug:main libidn 1.22_0 exists in the ports tree :debug:main libidn 1.22_0 is the latest installed :debug:main libidn 1.22_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/mail/libidn :debug:main OS darwin/11.3.0 (Mac OS X 10.7) arch i386 :debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided :debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided :debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main No need to upgrade! libidn 1.22_0 >= libidn 1.22_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main libiconv 1.14_0 exists in the ports tree :debug:main libiconv 1.14_0 is the latest installed :debug:main libiconv 1.14_0 +universal is active :debug:main Merging existing variants '+universal' into variants :debug:main new fully merged portvariants: universal + :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/textproc/libiconv :debug:main OS darwin/11.3.0 (Mac OS X 10.7) arch i386 :debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided :debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided :debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided :debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main universal variant already exists, so not adding the default one :debug:main Executing variant universal provides universal :debug:main No need to upgrade! libiconv 1.14_0 >= libiconv 1.14_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main gettext 0.18.1.1_2 exists in the ports tree :debug:main gettext 0.18.1.1_2 is the latest installed :debug:main gettext 0.18.1.1_2 +universal is active :debug:main Merging existing variants '+universal' into variants :debug:main new fully merged portvariants: universal + :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/gettext :debug:main OS darwin/11.3.0 (Mac OS X 10.7) arch i386 :debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided :debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided :debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided :debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/archcheck-1.0.tcl :debug:main universal variant already exists, so not adding the default one :debug:main Executing variant universal provides universal :debug:main No need to upgrade! gettext 0.18.1.1_2 >= gettext 0.18.1.1_2 :debug:main epoch: in tree: 0 installed: 0 :debug:main ncurses 5.9_1 exists in the ports tree :debug:main ncurses 5.9_1 is the latest installed :debug:main ncurses 5.9_1 +universal is active :debug:main Merging existing variants '+universal' into variants :debug:main new fully merged portvariants: universal + :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/ncurses :debug:main OS darwin/11.3.0 (Mac OS X 10.7) arch i386 :debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided :debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided :debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Executing variant universal provides universal :debug:main No need to upgrade! ncurses 5.9_1 >= ncurses 5.9_1 :debug:main epoch: in tree: 0 installed: 0 :debug:main expat 2.1.0_0 exists in the ports tree :debug:main expat 2.1.0_0 is the latest installed :debug:main expat 2.1.0_0 +universal is active :debug:main Merging existing variants '+universal' into variants :debug:main new fully merged portvariants: universal + :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/textproc/expat :debug:main OS darwin/11.3.0 (Mac OS X 10.7) arch i386 :debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided :debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided :debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Executing variant universal provides universal :debug:main No need to upgrade! expat 2.1.0_0 >= expat 2.1.0_0 :debug:main epoch: in tree: 1 installed: 1 :debug:main openssl 1.0.1b_0 exists in the ports tree :debug:main openssl 1.0.1b_0 is the latest installed :debug:main openssl 1.0.1b_0 +universal is active :debug:main Merging existing variants '+universal' into variants :debug:main new fully merged portvariants: universal + :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/openssl :debug:main OS darwin/11.3.0 (Mac OS X 10.7) arch i386 :debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided :debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided :debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided :debug:main Using group file /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main universal variant already exists, so not adding the default one :debug:main Executing variant universal provides universal :debug:main No need to upgrade! openssl 1.0.1b_0 >= openssl 1.0.1b_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main curl-ca-bundle 7.25.0_0 exists in the ports tree :debug:main curl-ca-bundle 7.25.0_0 is the latest installed :debug:main curl-ca-bundle 7.25.0_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/net/curl-ca-bundle :debug:main OS darwin/11.3.0 (Mac OS X 10.7) arch i386 :debug:main org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided :debug:main org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided :debug:main org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided :debug:main universal_variant is false, so not adding the default universal variant :debug:main No need to upgrade! curl-ca-bundle 7.25.0_0 >= curl-ca-bundle 7.25.0_0 :msg:main ---> Computing dependencies for netcdf:info:main .:debug:main Searching for dependency: hdf5-18 :debug:main Found Dependency: receipt exists for hdf5-18 :debug:main Searching for dependency: szip :debug:main Found Dependency: receipt exists for szip :debug:main Searching for dependency: curl :debug:main Found Dependency: receipt exists for curl :msg:main :debug:main Executing org.macports.main (netcdf) :debug:main changing euid/egid - current euid: 0 - current egid: 0 :debug:main egid changed to: 501 :debug:main euid changed to: 502 :debug:archivefetch archivefetch phase started at Thu May 3 15:43:48 CEST 2012 :msg:archivefetch ---> Fetching archive for netcdf :debug:archivefetch Executing org.macports.archivefetch (netcdf) :debug:archivefetch euid/egid changed to: 0/0 :debug:archivefetch chowned /opt/local/var/macports/software/netcdf to macports :debug:archivefetch euid/egid changed to: 502/501 :debug:archivefetch euid/egid changed to: 0/0 :debug:archivefetch chowned /opt/local/var/macports/incoming to macports :debug:archivefetch euid/egid changed to: 502/501 :info:archivefetch ---> netcdf-4.2_2+dap+netcdf4.darwin_11.x86_64.tbz2 doesn't seem to exist in /opt/local/var/macports/software/netcdf :msg:archivefetch ---> Attempting to fetch netcdf-4.2_2+dap+netcdf4.darwin_11.x86_64.tbz2 from http://packages.macports.org/netcdf :debug:archivefetch Fetching archive failed:: The requested URL returned error: 404 :debug:archivefetch Privilege de-escalation not attempted as not running as root. :debug:fetch fetch phase started at Thu May 3 15:43:49 CEST 2012 :notice:fetch ---> Fetching netcdf :debug:fetch euid/egid changed to: 0/0 :debug:fetch chowned /opt/local/var/macports/distfiles/netcdf to macports :debug:fetch euid/egid changed to: 502/501 :debug:fetch Executing org.macports.fetch (netcdf) :info:fetch ---> netcdf-4.2.tar.gz doesn't seem to exist in /opt/local/var/macports/distfiles/netcdf :debug:fetch Pinging ftp.unidata.ucar.edu... :debug:fetch Pinging www.gfd-dennou.org... :debug:fetch Pinging distfiles.macports.org... :debug:fetch Pinging aarnet.au.distfiles.macports.org... :debug:fetch Pinging her.gr.distfiles.macports.org... :debug:fetch Pinging jog.id.distfiles.macports.org... :debug:fetch Pinging lil.fr.distfiles.macports.org... :debug:fetch Pinging sea.us.distfiles.macports.org... :debug:fetch Pinging ykf.ca.distfiles.macports.org... :debug:fetch ftp.unidata.ucar.edu ping time is 190.621 :debug:fetch www.gfd-dennou.org ping time is 287.210 :debug:fetch distfiles.macports.org ping time is 159.786 :debug:fetch aarnet.au.distfiles.macports.org ping time is 302.415 :debug:fetch her.gr.distfiles.macports.org ping time is 52.032 :debug:fetch jog.id.distfiles.macports.org ping time is 268.288 :debug:fetch lil.fr.distfiles.macports.org ping time is 5.898 :debug:fetch sea.us.distfiles.macports.org ping time is 10000 :debug:fetch ykf.ca.distfiles.macports.org ping time is 140.824 :notice:fetch ---> Attempting to fetch netcdf-4.2.tar.gz from http://lil.fr.distfiles.macports.org/netcdf :debug:fetch Fetching failed:: The requested URL returned error: 404 :notice:fetch ---> Attempting to fetch netcdf-4.2.tar.gz from http://her.gr.distfiles.macports.org/mirrors/macports/mpdistfiles/netcdf :debug:fetch Fetching failed:: The requested URL returned error: 404 :notice:fetch ---> Attempting to fetch netcdf-4.2.tar.gz from http://ykf.ca.distfiles.macports.org/MacPorts/mpdistfiles/netcdf :debug:fetch Privilege de-escalation not attempted as not running as root. :debug:checksum checksum phase started at Thu May 3 15:43:56 CEST 2012 :notice:checksum ---> Verifying checksum(s) for netcdf :debug:checksum Executing org.macports.checksum (netcdf) :info:checksum ---> Checksumming netcdf-4.2.tar.gz :error:checksum Checksum (md5) mismatch for netcdf-4.2.tar.gz :info:checksum Portfile checksum: netcdf-4.2.tar.gz md5 e7790bb23d8bc23689f19f5cec81d71e :info:checksum Distfile checksum: netcdf-4.2.tar.gz md5 b920a6c3a30e9cd46fe96d9fb65ef17e :error:checksum Checksum (sha1) mismatch for netcdf-4.2.tar.gz :info:checksum Portfile checksum: netcdf-4.2.tar.gz sha1 9b3e15f3d6d21611e60ec6383adb57c30bf734fe :info:checksum Distfile checksum: netcdf-4.2.tar.gz sha1 949df89cd05ab8386e5f8080a183dc63c2f2f3bd :error:checksum Checksum (rmd160) mismatch for netcdf-4.2.tar.gz :info:checksum Portfile checksum: netcdf-4.2.tar.gz rmd160 698fe12ba8857f3cb46be6e809842a8dd8245160 :info:checksum Distfile checksum: netcdf-4.2.tar.gz rmd160 2cc9064e96df98e82a328c8984bbb4aaf8e4d698 :info:checksum The correct checksum line may be: :info:checksum checksums md5 b920a6c3a30e9cd46fe96d9fb65ef17e \ sha1 949df89cd05ab8386e5f8080a183dc63c2f2f3bd \ rmd160 2cc9064e96df98e82a328c8984bbb4aaf8e4d698 :error:checksum Target org.macports.checksum returned: Unable to verify file checksums :debug:checksum Backtrace: Unable to verify file checksums while executing "$procedure $targetname" :info:checksum Warning: the following items did not execute (for netcdf): org.macports.activate org.macports.checksum org.macports.extract org.macports.patch org.macports.configure org.macports.build org.macports.destroot org.macports.install :notice:checksum Log for netcdf is at: /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_netcdf/netcdf/main.log gg:~/atmosphere/UTIL/testpython $