Opened 14 years ago

Closed 14 years ago

#25616 closed defect (duplicate)

Problem with ncbi_tools

Reported by: xave@… Owned by: mike.thon@…
Priority: Normal Milestone:
Component: ports Version: 1.9.1
Keywords: Cc:
Port: ncbi_tools

Description (last modified by jmroot (Joshua Root))

When I install ncbi_tools I receive the following:

sudo port -v -d install ncbi_tools
DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/ports/science/ncbi_tools
DEBUG: OS darwin/9.8.0 (Mac OS X 10.5) arch i386
DEBUG: org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
DEBUG: org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
DEBUG: universal_variant is false, so not adding the default universal variant
DEBUG: Starting logging for ncbi_tools
--->  Computing dependencies for ncbi_tools
DEBUG: Executing org.macports.main (ncbi_tools)
DEBUG: Skipping completed org.macports.fetch (ncbi_tools)
DEBUG: Skipping completed org.macports.checksum (ncbi_tools)
DEBUG: Skipping completed org.macports.extract (ncbi_tools)
DEBUG: Skipping completed org.macports.patch (ncbi_tools)
DEBUG: Skipping completed org.macports.configure (ncbi_tools)
--->  Building ncbi_tools
DEBUG: build phase started at Sat Jul 10 16:30:02 CEST 2010
DEBUG: Executing org.macports.build (ncbi_tools)
DEBUG: Environment: CPATH='/opt/local/include' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_ncbi_tools/work/.CC_PRINT_OPTIONS' LIBRARY_PATH='/opt/local/lib' CC_PRINT_OPTIONS='YES' MACOSX_DEPLOYMENT_TARGET='10.5'
DEBUG: Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_ncbi_tools/work/" && './ncbi/make/makedis.csh' -j2'
Unable to find the file -j2
shell command " cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_ncbi_tools/work/" && './ncbi/make/makedis.csh' -j2 " returned error 1
Error: Target org.macports.build returned: shell command failed
DEBUG: Backtrace: shell command failed
    while executing
"command_exec build"
    (procedure "portbuild::build_main" line 8)
    invoked from within
"$procedure $targetname"
Warning: the following items did not execute (for ncbi_tools): org.macports.activate org.macports.build org.macports.destroot org.macports.install
Log for ncbi_tools is at: /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_ncbi_tools/main.log
Error: Status 1 encountered during processing.
To report a bug, see <http://guide.macports.org/#project.tickets>

Thanks

Change History (2)

comment:1 Changed 14 years ago by jmroot (Joshua Root)

Description: modified (diff)
Owner: changed from macports-tickets@… to mike.thon@…
Port: ncbi_tools added

Please remember to preview and use WikiFormatting, fill in the Port field, and cc the maintainer.

comment:2 Changed 14 years ago by jmroot (Joshua Root)

Resolution: duplicate
Status: newclosed

Duplicate of #22621, please search before filing new tickets.

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