Opened 13 years ago

Closed 11 years ago

#28996 closed defect (fixed)

atlas: Undefined symbols save_world rest_world

Reported by: moussor@… Owned by: jameskyle@…
Priority: Normal Milestone:
Component: ports Version: 1.9.2
Keywords: ppc Cc: Veence (Vincent), dbevans (David B. Evans), alun.j.carr@…, trog24 (Frank J. R. Hanstick)
Port: atlas

Description

Hi, when I try to upgrade atlas i've got this error :

--->  Computing dependencies for atlas
--->  Building atlas
Error: Target org.macports.build returned: shell command failed (see log for details)
Log for atlas is at: /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_atlas/main.log
Error: Unable to upgrade port: 1
To report a bug, see <http://guide.macports.org/#project.tickets>

Is anybody can help me please ?

Attachments (7)

main.log (90.3 KB) - added by trog24 (Frank J. R. Hanstick) 13 years ago.
build log
main.2.log (84.2 KB) - added by dbevans (David B. Evans) 13 years ago.
devans log file
main.3.log (90.3 KB) - added by trog24 (Frank J. R. Hanstick) 13 years ago.
Another undefined log.
main.4.log (90.3 KB) - added by trog24 (Frank J. R. Hanstick) 13 years ago.
Atlas log
main.5.log (90.3 KB) - added by trog24 (Frank J. R. Hanstick) 13 years ago.
Atlas upgrade failure log.
main.6.log (90.3 KB) - added by trog24 (Frank J. R. Hanstick) 13 years ago.
build log
main.7.log (341.1 KB) - added by ronald.sellar@… 13 years ago.
log file on G5 Macports 2.0.3, atlas 3.9.47_0+gcc44

Download all attachments as: .zip

Change History (33)

comment:1 Changed 13 years ago by moussor@…

and the log is here : http://pastebin.com/a0adxK1z (sorry for the double post)

comment:2 Changed 13 years ago by ryandesign (Ryan Carsten Schmidt)

Keywords: atlas removed
Owner: changed from macports-tickets@… to jameskyle@…
Summary: pb upgrading atlas outdatedatlas build error

Changed 13 years ago by trog24 (Frank J. R. Hanstick)

Attachment: main.log added

build log

comment:3 Changed 13 years ago by trog24 (Frank J. R. Hanstick)

When trying to upgrade, Atlas failed to build with the following error:

:debug:build Executing proc-post-org.macports.build-build-0
:info:build Undefined symbols:
:info:build   "save_world", referenced from:
:info:build       _ATL_cmvnk__900003 in libatlas.a(ATL_cmvnk__900003.o)
:info:build       _ATL_cmvnk__900003_b0 in libatlas.a(ATL_cmvnk__900003_b0.o)
:info:build   "rest_world", referenced from:
:info:build       _ATL_cmvnk__900003 in libatlas.a(ATL_cmvnk__900003.o)
:info:build       _ATL_cmvnk__900003_b0 in libatlas.a(ATL_cmvnk__900003_b0.o)
:info:build ld: symbol(s) not found
:info:build shell command "cd /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_atlas/work/atlas-3.9.37/build/lib &&  ( test ! -e libatlas.a ||  /usr/bin/ld -arch ppc -dynamic -dylib -single_module -dead_strip  -x -all_load -L. -L/opt/local/lib/gcc44/ppc  -L/opt/local/lib/gcc44 -ldylib1.o  -dylib_install_name /opt/local/lib/libatlas.dylib  libatlas.a -o libatlas.dylib  -lSystem  )" returned error 1
:error:build Target org.macports.build returned: shell command failed (see log for details)
:debug:build Backtrace: shell command failed (see log for details)
    while executing
"$post $targetname"
:info:build Warning: the following items did not execute (for atlas): org.macports.destroot org.macports.build
:notice:build Log for atlas is at: /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_atlas/main.log

The platform is a dual 1.73 GHz PowerPC G4 Quicksilver. The build log was attached.

comment:4 Changed 13 years ago by dbevans (David B. Evans)

I'm see a similar error using a single processor 867Mhz G4 Quicksilver Error occurs during the post-build phase.

:debug:build Executing proc-post-org.macports.build-build-0
:info:build Undefined symbols:
:info:build   "save_world", referenced from:
:info:build       _ATL_cger2k__900003 in libatlas.a(ATL_cger2k__900003.o)
:info:build   "rest_world", referenced from:
:info:build       _ATL_cger2k__900003 in libatlas.a(ATL_cger2k__900003.o)
:info:build ld: symbol(s) not found

Log file attached. I'm using the +gcc44 variant (haven't tried others).

Changed 13 years ago by dbevans (David B. Evans)

Attachment: main.2.log added

devans log file

comment:5 Changed 13 years ago by dbevans (David B. Evans)

Cc: devans@… added

comment:6 Changed 13 years ago by alun.j.carr@…

Cc: alun.j.carr@… added

Cc Me!

comment:7 in reply to:  description Changed 13 years ago by alun.j.carr@…

I'm having the same problem on a 1.5 GHz 12" PowerBook G4, 1.25 GB RAM, OS X 10.5.8, Xcode 3.1.4.

comment:8 Changed 13 years ago by razzfazz (Daniel Becker)

Same problem here, PowerBook G4 1.5GHz, 10.5.8.

comment:9 Changed 13 years ago by ryandesign (Ryan Carsten Schmidt)

Summary: atlas build erroratlas: Undefined symbols save_world rest_world

comment:10 Changed 13 years ago by ryandesign (Ryan Carsten Schmidt)

Actually this ticket has gotten confused and contains two distinct errors: The original one reported: "duplicate symbol _ATL_DecAtomicCount", for which we should probably shift any discussion over to #29310; and "Undefined symbols save_world rest_world", which I guess we'll make this ticket about now.

comment:11 Changed 13 years ago by trog24 (Frank J. R. Hanstick)

Cc: trog24@… added

Cc Me!

comment:12 Changed 13 years ago by trog24 (Frank J. R. Hanstick)

Another log with undefined.

Changed 13 years ago by trog24 (Frank J. R. Hanstick)

Attachment: main.3.log added

Another undefined log.

comment:13 Changed 13 years ago by Veence (Vincent)

I am working on the 3.9.40 newest version. If you can hold a day or two, I might have a new Portfile before the end of the week-end.

comment:14 Changed 13 years ago by ryandesign (Ryan Carsten Schmidt)

#29465 might be a duplicate.

comment:15 Changed 13 years ago by trog24 (Frank J. R. Hanstick)

sudo port upgrade installed following a sudo port selfupdate resulted in atlas failure for Undefined save_world rest_world log attached. Platform is dual 1.73 GHz PowerPC G4 running MacOS 10.5.8.

Changed 13 years ago by trog24 (Frank J. R. Hanstick)

Attachment: main.4.log added

Atlas log

Changed 13 years ago by trog24 (Frank J. R. Hanstick)

Attachment: main.5.log added

Atlas upgrade failure log.

comment:16 Changed 13 years ago by trog24 (Frank J. R. Hanstick)

Atlas Upgrade failure, see attached log.

comment:17 Changed 13 years ago by trog24 (Frank J. R. Hanstick)

Atlas upgrade failure. See attached log. Is this ever going to get fixed?

Changed 13 years ago by trog24 (Frank J. R. Hanstick)

Attachment: main.6.log added

build log

comment:18 Changed 13 years ago by trog24 (Frank J. R. Hanstick)

Atlas upgraded to 3.9.37_0+gcc44. This defect can now be considered closed. Thank you.

comment:19 Changed 13 years ago by ronald.sellar@…

I'm getting this error again building atlas 3.9.47_0+gcc44 on a G5 dual core as part of a port upgrade outdated command. Even after a sudo port selfupdate (to Macports 2.0.3).

Changed 13 years ago by ronald.sellar@…

Attachment: main.7.log added

log file on G5 Macports 2.0.3, atlas 3.9.47_0+gcc44

comment:20 Changed 13 years ago by Veence (Vincent)

I'm constantly in touch with ATLAS author and maintainer, so I'll ask him what is this error about.

comment:21 Changed 13 years ago by Veence (Vincent)

I am going to commit 3.9.50 on Monday, so please hang on and try again once the new Portfile will be available.

comment:22 Changed 12 years ago by punch@…

Just wondering where this one is. I see a commit coming to 3.9.50 from about 3 months ago but haven't seen it happen. I am getting the same error on 10.5.8, ppc, gcc4.4. I appreciate all the help that is being given, so I am just asking for status. Thanks

comment:23 Changed 12 years ago by Veence (Vincent)

It has been postponed because there was unsolved problems. As strange as it may be, we are still working on it with Atlas maintainer/author. Stay tuned!

comment:24 Changed 12 years ago by jmroot (Joshua Root)

Cc: vince@… added

comment:25 Changed 12 years ago by jmroot (Joshua Root)

Keywords: ppc added

comment:26 Changed 11 years ago by Veence (Vincent)

Resolution: fixed
Status: newclosed

This must be solved now. I close this bug.

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