py-scipy @0.13.3_1: builds agains ATLAS (variant +atlas) Seg. fault during testing.

[petrrr]

I built py-scipy against ATLAS. This version of scipy crashes during testing with a Segmentation fault. The details below are for py27-scipy +atlas, but it was observed before (version @0.13.3) with other python subports as well.

There seem to be some real failures before the crash as well.

In [2]: import scipy

In [3]: scipy.test()
Running unit tests for scipy
NumPy version 1.8.0
NumPy is installed in /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy
SciPy version 0.13.3
SciPy is installed in /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/scipy
Python version 2.7.6 (default, Nov 22 2013, 13:39:24) [GCC 4.2.1 Compatible Apple Clang 4.1 ((tags/Apple/clang-421.11.66))]
nose version 1.3.1
/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/lib/utils.py:134: DeprecationWarning: `scipy.lib.blas` is deprecated, use `scipy.linalg.blas` instead!
  warnings.warn(depdoc, DeprecationWarning)
/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/lib/utils.py:134: DeprecationWarning: `scipy.lib.lapack` is deprecated, use `scipy.linalg.lapack` instead!
  warnings.warn(depdoc, DeprecationWarning)
..............................................................................................................................................................................................................................K..................................................................................................................K.......................................................................................K..K...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................F..FF......................................................................................................................................SSSSSS......SSSSSS......SSSS..............................FFF.....................................................0-th dimension must be fixed to 3 but got 15
..0-th dimension must be fixed to 3 but got 5
...F.Segmentation fault

ATLAS is installed as:

atlas @3.10.1_5+mpclang33 (active)

I also attach a crash report in the hope that it might help.

Not sure if this could be due to compiler mismatch. I CC Vince as atlas maintainer as well.

[petrrr]

Duplicate of #43321, due to trac not being responsive.