Ticket #45401: main.2.log

File main.2.log, 559.2 KB (added by Lenuci@…, 3 years ago)

Same problem :-((

Line 
1version:1
2:debug:main Found Dependency: path: /usr/bin filename: svn regex: ^svn$
3:debug:main epoch: in tree: 2 installed: 2
4:debug:main python27 2.7.8_3 exists in the ports tree
5:debug:main python27 2.7.8_3  is the latest installed
6:debug:main python27 2.7.8_3  is active
7:debug:main Merging existing variants '' into variants
8:debug:main new fully merged portvariants:
9:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/lang/python27
10:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
11:debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
12:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
13:debug:main universal variant already exists, so not adding the default one
14:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
15:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
16:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
17:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
18:debug:main No need to upgrade! python27 2.7.8_3 >= python27 2.7.8_3
19:debug:main epoch: in tree: 2 installed: 2
20:debug:main gettext 0.19.3_1 exists in the ports tree
21:debug:main gettext 0.19.3_1  is the latest installed
22:debug:main gettext 0.19.3_1  is active
23:debug:main Merging existing variants '' into variants
24:debug:main new fully merged portvariants:
25:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/gettext
26:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
27:debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl
28:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
29:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
30:debug:main compiler clang 600.0.54 not blacklisted because it doesn't match {clang < 211.10.1}
31:debug:main universal variant already exists, so not adding the default one
32:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
33:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
34:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
35:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
36:debug:main No need to upgrade! gettext 0.19.3_1 >= gettext 0.19.3_1
37:debug:main epoch: in tree: 0 installed: 0
38:debug:main expat 2.1.0_0 exists in the ports tree
39:debug:main expat 2.1.0_0  is the latest installed
40:debug:main expat 2.1.0_0  is active
41:debug:main Merging existing variants '' into variants
42:debug:main new fully merged portvariants:
43:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/textproc/expat
44:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
45:debug:main adding the default universal variant
46:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
47:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
48:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
49:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
50:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
51:debug:main No need to upgrade! expat 2.1.0_0 >= expat 2.1.0_0
52:debug:main epoch: in tree: 0 installed: 0
53:debug:main libiconv 1.14_0 exists in the ports tree
54:debug:main libiconv 1.14_0  is the latest installed
55:debug:main libiconv 1.14_0  is active
56:debug:main Merging existing variants '' into variants
57:debug:main new fully merged portvariants:
58:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/textproc/libiconv
59:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
60:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
61:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
62:debug:main universal variant already exists, so not adding the default one
63:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
64:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
65:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
66:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
67:debug:main No need to upgrade! libiconv 1.14_0 >= libiconv 1.14_0
68:debug:main epoch: in tree: 0 installed: 0
69:debug:main ncurses 5.9_2 exists in the ports tree
70:debug:main ncurses 5.9_2  is the latest installed
71:debug:main ncurses 5.9_2  is active
72:debug:main Merging existing variants '' into variants
73:debug:main new fully merged portvariants:
74:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/ncurses
75:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
76:debug:main adding the default universal variant
77:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
78:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
79:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
80:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
81:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
82:debug:main No need to upgrade! ncurses 5.9_2 >= ncurses 5.9_2
83:debug:main epoch: in tree: 0 installed: 0
84:debug:main zlib 1.2.8_0 exists in the ports tree
85:debug:main zlib 1.2.8_0  is the latest installed
86:debug:main zlib 1.2.8_0  is active
87:debug:main Merging existing variants '' into variants
88:debug:main new fully merged portvariants:
89:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/archivers/zlib
90:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
91:debug:main Sourcing PortGroup xcodeversion 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/xcodeversion-1.0.tcl
92:debug:main adding the default universal variant
93:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
94:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
95:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
96:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
97:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
98:debug:main No need to upgrade! zlib 1.2.8_0 >= zlib 1.2.8_0
99:debug:main epoch: in tree: 1 installed: 1
100:debug:main openssl 1.0.1j_0 exists in the ports tree
101:debug:main openssl 1.0.1j_0  is the latest installed
102:debug:main openssl 1.0.1j_0  is active
103:debug:main Merging existing variants '' into variants
104:debug:main new fully merged portvariants:
105:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/openssl
106:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
107:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
108:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
109:debug:main universal variant already exists, so not adding the default one
110:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
111:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
112:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
113:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
114:debug:main No need to upgrade! openssl 1.0.1j_0 >= openssl 1.0.1j_0
115:debug:main epoch: in tree: 0 installed: 0
116:debug:main sqlite3 3.8.7.3_0 exists in the ports tree
117:debug:main sqlite3 3.8.7.3_0  is the latest installed
118:debug:main sqlite3 3.8.7.3_0  is active
119:debug:main Merging existing variants '' into variants
120:debug:main new fully merged portvariants:
121:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/databases/sqlite3
122:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
123:debug:main adding the default universal variant
124:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
125:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
126:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
127:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
128:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
129:debug:main No need to upgrade! sqlite3 3.8.7.3_0 >= sqlite3 3.8.7.3_0
130:debug:main epoch: in tree: 20090923 installed: 20090923
131:debug:main libedit 20140620-3.1_0 exists in the ports tree
132:debug:main libedit 20140620-3.1_0  is the latest installed
133:debug:main libedit 20140620-3.1_0  is active
134:debug:main Merging existing variants '' into variants
135:debug:main new fully merged portvariants:
136:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/libedit
137:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
138:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
139:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
140:debug:main universal variant already exists, so not adding the default one
141:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
142:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
143:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
144:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
145:debug:main No need to upgrade! libedit 20140620-3.1_0 >= libedit 20140620-3.1_0
146:debug:main epoch: in tree: 0 installed: 0
147:debug:main db48 4.8.30_4 exists in the ports tree
148:debug:main db48 4.8.30_4  is the latest installed
149:debug:main db48 4.8.30_4  is active
150:debug:main Merging existing variants '' into variants
151:debug:main new fully merged portvariants:
152:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/databases/db48
153:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
154:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
155:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
156:debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
157:debug:main universal variant already exists, so not adding the default one
158:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
159:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
160:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
161:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
162:debug:main No need to upgrade! db48 4.8.30_4 >= db48 4.8.30_4
163:debug:main epoch: in tree: 0 installed: 0
164:debug:main db_select 0.1_2 exists in the ports tree
165:debug:main db_select 0.1_2  is the latest installed
166:debug:main db_select 0.1_2  is active
167:debug:main Merging existing variants '' into variants
168:debug:main new fully merged portvariants:
169:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/sysutils/db_select
170:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
171:debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
172:debug:main universal_variant is false, so not adding the default universal variant
173:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
174:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
175:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
176:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
177:debug:main No need to upgrade! db_select 0.1_2 >= db_select 0.1_2
178:debug:main epoch: in tree: 0 installed: 0
179:debug:main bzip2 1.0.6_0 exists in the ports tree
180:debug:main bzip2 1.0.6_0  is the latest installed
181:debug:main bzip2 1.0.6_0  is active
182:debug:main Merging existing variants '' into variants
183:debug:main new fully merged portvariants:
184:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/archivers/bzip2
185:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
186:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
187:debug:main universal variant already exists, so not adding the default one
188:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
189:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
190:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
191:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
192:debug:main No need to upgrade! bzip2 1.0.6_0 >= bzip2 1.0.6_0
193:debug:main epoch: in tree: 0 installed: 0
194:debug:main python_select 0.3_4 exists in the ports tree
195:debug:main python_select 0.3_4  is the latest installed
196:debug:main python_select 0.3_4  is active
197:debug:main Merging existing variants '' into variants
198:debug:main new fully merged portvariants:
199:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/sysutils/python_select
200:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
201:debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
202:debug:main universal_variant is false, so not adding the default universal variant
203:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
204:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
205:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
206:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
207:debug:main No need to upgrade! python_select 0.3_4 >= python_select 0.3_4
208:debug:main epoch: in tree: 0 installed: 0
209:debug:main freeglut 2.8.1_0 exists in the ports tree
210:debug:main freeglut 2.8.1_0  is the latest installed
211:debug:main freeglut 2.8.1_0  is active
212:debug:main Merging existing variants '' into variants
213:debug:main new fully merged portvariants:
214:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/freeglut
215:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
216:debug:main adding the default universal variant
217:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
218:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
219:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
220:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
221:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
222:debug:main No need to upgrade! freeglut 2.8.1_0 >= freeglut 2.8.1_0
223:debug:main epoch: in tree: 1 installed: 1
224:debug:main mesa 8.0.5_3 exists in the ports tree
225:debug:main mesa 8.0.5_3 +python27 is the latest installed
226:debug:main mesa 8.0.5_3 +python27 is active
227:debug:main Merging existing variants '+python27' into variants
228:debug:main new fully merged portvariants: python27 +
229:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/mesa
230:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
231:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
232:debug:main universal variant already exists, so not adding the default one
233:debug:main Executing variant python27 provides python27
234:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
235:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
236:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
237:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
238:debug:main No need to upgrade! mesa 8.0.5_3 >= mesa 8.0.5_3
239:debug:main epoch: in tree: 0 installed: 0
240:debug:main xorg-glproto 1.4.17_0 exists in the ports tree
241:debug:main xorg-glproto 1.4.17_0  is the latest installed
242:debug:main xorg-glproto 1.4.17_0  is active
243:debug:main Merging existing variants '' into variants
244:debug:main new fully merged portvariants:
245:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-glproto
246:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
247:debug:main only one arch supported, so not adding the default universal variant
248:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
249:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
250:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
251:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
252:debug:main No need to upgrade! xorg-glproto 1.4.17_0 >= xorg-glproto 1.4.17_0
253:debug:main epoch: in tree: 0 installed: 0
254:debug:main xorg-dri2proto 2.8_0 exists in the ports tree
255:debug:main xorg-dri2proto 2.8_0  is the latest installed
256:debug:main xorg-dri2proto 2.8_0  is active
257:debug:main Merging existing variants '' into variants
258:debug:main new fully merged portvariants:
259:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-dri2proto
260:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
261:debug:main only one arch supported, so not adding the default universal variant
262:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
263:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
264:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
265:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
266:debug:main No need to upgrade! xorg-dri2proto 2.8_0 >= xorg-dri2proto 2.8_0
267:debug:main epoch: in tree: 0 installed: 0
268:debug:main xorg-libXfixes 5.0.1_0 exists in the ports tree
269:debug:main xorg-libXfixes 5.0.1_0  is the latest installed
270:debug:main xorg-libXfixes 5.0.1_0  is active
271:debug:main Merging existing variants '' into variants
272:debug:main new fully merged portvariants:
273:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libXfixes
274:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
275:debug:main adding the default universal variant
276:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
277:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
278:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
279:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
280:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
281:debug:main No need to upgrade! xorg-libXfixes 5.0.1_0 >= xorg-libXfixes 5.0.1_0
282:debug:main epoch: in tree: 0 installed: 0
283:debug:main xorg-libX11 1.6.2_0 exists in the ports tree
284:debug:main xorg-libX11 1.6.2_0  is the latest installed
285:debug:main xorg-libX11 1.6.2_0  is active
286:debug:main Merging existing variants '' into variants
287:debug:main new fully merged portvariants:
288:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libX11
289:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
290:debug:main adding the default universal variant
291:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
292:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
293:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
294:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
295:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
296:debug:main No need to upgrade! xorg-libX11 1.6.2_0 >= xorg-libX11 1.6.2_0
297:debug:main epoch: in tree: 0 installed: 0
298:debug:main xorg-libXdmcp 1.1.1_0 exists in the ports tree
299:debug:main xorg-libXdmcp 1.1.1_0  is the latest installed
300:debug:main xorg-libXdmcp 1.1.1_0  is active
301:debug:main Merging existing variants '' into variants
302:debug:main new fully merged portvariants:
303:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libXdmcp
304:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
305:debug:main adding the default universal variant
306:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
307:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
308:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
309:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
310:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
311:debug:main No need to upgrade! xorg-libXdmcp 1.1.1_0 >= xorg-libXdmcp 1.1.1_0
312:debug:main epoch: in tree: 0 installed: 0
313:debug:main xorg-libXau 1.0.8_0 exists in the ports tree
314:debug:main xorg-libXau 1.0.8_0  is the latest installed
315:debug:main xorg-libXau 1.0.8_0  is active
316:debug:main Merging existing variants '' into variants
317:debug:main new fully merged portvariants:
318:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libXau
319:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
320:debug:main adding the default universal variant
321:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
322:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
323:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
324:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
325:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
326:debug:main No need to upgrade! xorg-libXau 1.0.8_0 >= xorg-libXau 1.0.8_0
327:debug:main epoch: in tree: 0 installed: 0
328:debug:main xorg-xproto 7.0.26_0 exists in the ports tree
329:debug:main xorg-xproto 7.0.26_0  is the latest installed
330:debug:main xorg-xproto 7.0.26_0  is active
331:debug:main Merging existing variants '' into variants
332:debug:main new fully merged portvariants:
333:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-xproto
334:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
335:debug:main only one arch supported, so not adding the default universal variant
336:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
337:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
338:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
339:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
340:debug:main No need to upgrade! xorg-xproto 7.0.26_0 >= xorg-xproto 7.0.26_0
341:debug:main epoch: in tree: 0 installed: 0
342:debug:main xorg-libxcb 1.11_0 exists in the ports tree
343:debug:main xorg-libxcb 1.11_0 +python27 is the latest installed
344:debug:main xorg-libxcb 1.11_0 +python27 is active
345:debug:main Merging existing variants '+python27' into variants
346:debug:main new fully merged portvariants: python27 +
347:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libxcb
348:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
349:debug:main adding the default universal variant
350:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
351:debug:main Executing variant python27 provides python27
352:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
353:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
354:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
355:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
356:debug:main No need to upgrade! xorg-libxcb 1.11_0 >= xorg-libxcb 1.11_0
357:debug:main epoch: in tree: 0 installed: 0
358:debug:main xorg-xcb-proto 1.11_0 exists in the ports tree
359:debug:main xorg-xcb-proto 1.11_0 +python27 is the latest installed
360:debug:main xorg-xcb-proto 1.11_0 +python27 is active
361:debug:main Merging existing variants '+python27' into variants
362:debug:main new fully merged portvariants: python27 +
363:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-xcb-proto
364:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
365:debug:main only one arch supported, so not adding the default universal variant
366:debug:main Executing variant python27 provides python27
367:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
368:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
369:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
370:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
371:debug:main No need to upgrade! xorg-xcb-proto 1.11_0 >= xorg-xcb-proto 1.11_0
372:debug:main epoch: in tree: 0 installed: 0
373:debug:main libxml2 2.9.2_1 exists in the ports tree
374:debug:main libxml2 2.9.2_1  is the latest installed
375:debug:main libxml2 2.9.2_1  is active
376:debug:main Merging existing variants '' into variants
377:debug:main new fully merged portvariants:
378:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/textproc/libxml2
379:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
380:debug:main adding the default universal variant
381:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
382:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
383:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
384:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
385:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
386:debug:main No need to upgrade! libxml2 2.9.2_1 >= libxml2 2.9.2_1
387:debug:main epoch: in tree: 0 installed: 0
388:debug:main xz 5.0.7_0 exists in the ports tree
389:debug:main xz 5.0.7_0  is the latest installed
390:debug:main xz 5.0.7_0  is active
391:debug:main Merging existing variants '' into variants
392:debug:main new fully merged portvariants:
393:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/archivers/xz
394:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
395:debug:main adding the default universal variant
396:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
397:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
398:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
399:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
400:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
401:debug:main No need to upgrade! xz 5.0.7_0 >= xz 5.0.7_0
402:debug:main epoch: in tree: 0 installed: 0
403:debug:main xorg-libpthread-stubs 0.3_0 exists in the ports tree
404:debug:main xorg-libpthread-stubs 0.3_0  is the latest installed
405:debug:main xorg-libpthread-stubs 0.3_0  is active
406:debug:main Merging existing variants '' into variants
407:debug:main new fully merged portvariants:
408:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libpthread-stubs
409:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
410:debug:main only one arch supported, so not adding the default universal variant
411:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
412:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
413:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
414:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
415:debug:main No need to upgrade! xorg-libpthread-stubs 0.3_0 >= xorg-libpthread-stubs 0.3_0
416:debug:main epoch: in tree: 0 installed: 0
417:debug:main xorg-kbproto 1.0.6_0 exists in the ports tree
418:debug:main xorg-kbproto 1.0.6_0  is the latest installed
419:debug:main xorg-kbproto 1.0.6_0  is active
420:debug:main Merging existing variants '' into variants
421:debug:main new fully merged portvariants:
422:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-kbproto
423:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
424:debug:main only one arch supported, so not adding the default universal variant
425:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
426:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
427:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
428:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
429:debug:main No need to upgrade! xorg-kbproto 1.0.6_0 >= xorg-kbproto 1.0.6_0
430:debug:main epoch: in tree: 0 installed: 0
431:debug:main xorg-fixesproto 5.0_0 exists in the ports tree
432:debug:main xorg-fixesproto 5.0_0  is the latest installed
433:debug:main xorg-fixesproto 5.0_0  is active
434:debug:main Merging existing variants '' into variants
435:debug:main new fully merged portvariants:
436:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-fixesproto
437:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
438:debug:main only one arch supported, so not adding the default universal variant
439:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
440:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
441:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
442:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
443:debug:main No need to upgrade! xorg-fixesproto 5.0_0 >= xorg-fixesproto 5.0_0
444:debug:main epoch: in tree: 0 installed: 0
445:debug:main xorg-xextproto 7.3.0_0 exists in the ports tree
446:debug:main xorg-xextproto 7.3.0_0  is the latest installed
447:debug:main xorg-xextproto 7.3.0_0  is active
448:debug:main Merging existing variants '' into variants
449:debug:main new fully merged portvariants:
450:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-xextproto
451:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
452:debug:main only one arch supported, so not adding the default universal variant
453:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
454:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
455:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
456:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
457:debug:main No need to upgrade! xorg-xextproto 7.3.0_0 >= xorg-xextproto 7.3.0_0
458:debug:main epoch: in tree: 0 installed: 0
459:debug:main xorg-libXi 1.7.4_0 exists in the ports tree
460:debug:main xorg-libXi 1.7.4_0  is the latest installed
461:debug:main xorg-libXi 1.7.4_0  is active
462:debug:main Merging existing variants '' into variants
463:debug:main new fully merged portvariants:
464:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libXi
465:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
466:debug:main adding the default universal variant
467:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
468:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
469:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
470:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
471:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
472:debug:main No need to upgrade! xorg-libXi 1.7.4_0 >= xorg-libXi 1.7.4_0
473:debug:main epoch: in tree: 0 installed: 0
474:debug:main xorg-libXext 1.3.3_0 exists in the ports tree
475:debug:main xorg-libXext 1.3.3_0  is the latest installed
476:debug:main xorg-libXext 1.3.3_0  is active
477:debug:main Merging existing variants '' into variants
478:debug:main new fully merged portvariants:
479:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libXext
480:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
481:debug:main adding the default universal variant
482:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
483:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
484:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
485:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
486:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
487:debug:main No need to upgrade! xorg-libXext 1.3.3_0 >= xorg-libXext 1.3.3_0
488:debug:main epoch: in tree: 0 installed: 0
489:debug:main xorg-inputproto 2.3.1_0 exists in the ports tree
490:debug:main xorg-inputproto 2.3.1_0  is the latest installed
491:debug:main xorg-inputproto 2.3.1_0  is active
492:debug:main Merging existing variants '' into variants
493:debug:main new fully merged portvariants:
494:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-inputproto
495:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
496:debug:main only one arch supported, so not adding the default universal variant
497:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
498:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
499:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
500:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
501:debug:main No need to upgrade! xorg-inputproto 2.3.1_0 >= xorg-inputproto 2.3.1_0
502:debug:main epoch: in tree: 0 installed: 0
503:debug:main xorg-libXmu 1.1.2_0 exists in the ports tree
504:debug:main xorg-libXmu 1.1.2_0  is the latest installed
505:debug:main xorg-libXmu 1.1.2_0  is active
506:debug:main Merging existing variants '' into variants
507:debug:main new fully merged portvariants:
508:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libXmu
509:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
510:debug:main adding the default universal variant
511:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
512:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
513:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
514:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
515:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
516:debug:main No need to upgrade! xorg-libXmu 1.1.2_0 >= xorg-libXmu 1.1.2_0
517:debug:main epoch: in tree: 0 installed: 0
518:debug:main xorg-libXt 1.1.4_0 exists in the ports tree
519:debug:main xorg-libXt 1.1.4_0  is the latest installed
520:debug:main xorg-libXt 1.1.4_0  is active
521:debug:main Merging existing variants '' into variants
522:debug:main new fully merged portvariants:
523:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libXt
524:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
525:debug:main adding the default universal variant
526:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
527:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
528:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
529:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
530:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
531:debug:main No need to upgrade! xorg-libXt 1.1.4_0 >= xorg-libXt 1.1.4_0
532:debug:main epoch: in tree: 0 installed: 0
533:debug:main xorg-libsm 1.2.1_0 exists in the ports tree
534:debug:main xorg-libsm 1.2.1_0  is the latest installed
535:debug:main xorg-libsm 1.2.1_0  is active
536:debug:main Merging existing variants '' into variants
537:debug:main new fully merged portvariants:
538:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libsm
539:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
540:debug:main adding the default universal variant
541:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
542:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
543:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
544:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
545:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
546:debug:main No need to upgrade! xorg-libsm 1.2.1_0 >= xorg-libsm 1.2.1_0
547:debug:main epoch: in tree: 0 installed: 0
548:debug:main xorg-libice 1.0.8_0 exists in the ports tree
549:debug:main xorg-libice 1.0.8_0  is the latest installed
550:debug:main xorg-libice 1.0.8_0  is active
551:debug:main Merging existing variants '' into variants
552:debug:main new fully merged portvariants:
553:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libice
554:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
555:debug:main adding the default universal variant
556:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
557:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
558:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
559:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
560:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
561:debug:main No need to upgrade! xorg-libice 1.0.8_0 >= xorg-libice 1.0.8_0
562:debug:main epoch: in tree: 0 installed: 0
563:debug:main xorg-libXrandr 1.4.2_0 exists in the ports tree
564:debug:main xorg-libXrandr 1.4.2_0  is the latest installed
565:debug:main xorg-libXrandr 1.4.2_0  is active
566:debug:main Merging existing variants '' into variants
567:debug:main new fully merged portvariants:
568:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libXrandr
569:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
570:debug:main adding the default universal variant
571:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
572:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
573:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
574:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
575:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
576:debug:main No need to upgrade! xorg-libXrandr 1.4.2_0 >= xorg-libXrandr 1.4.2_0
577:debug:main epoch: in tree: 0 installed: 0
578:debug:main xrender 0.9.8_0 exists in the ports tree
579:debug:main xrender 0.9.8_0  is the latest installed
580:debug:main xrender 0.9.8_0  is active
581:debug:main Merging existing variants '' into variants
582:debug:main new fully merged portvariants:
583:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xrender
584:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
585:debug:main adding the default universal variant
586:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
587:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
588:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
589:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
590:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
591:debug:main No need to upgrade! xrender 0.9.8_0 >= xrender 0.9.8_0
592:debug:main epoch: in tree: 0 installed: 0
593:debug:main xorg-renderproto 0.11.1_0 exists in the ports tree
594:debug:main xorg-renderproto 0.11.1_0  is the latest installed
595:debug:main xorg-renderproto 0.11.1_0  is active
596:debug:main Merging existing variants '' into variants
597:debug:main new fully merged portvariants:
598:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-renderproto
599:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
600:debug:main only one arch supported, so not adding the default universal variant
601:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
602:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
603:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
604:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
605:debug:main No need to upgrade! xorg-renderproto 0.11.1_0 >= xorg-renderproto 0.11.1_0
606:debug:main epoch: in tree: 0 installed: 0
607:debug:main xorg-randrproto 1.4.0_0 exists in the ports tree
608:debug:main xorg-randrproto 1.4.0_0  is the latest installed
609:debug:main xorg-randrproto 1.4.0_0  is active
610:debug:main Merging existing variants '' into variants
611:debug:main new fully merged portvariants:
612:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-randrproto
613:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
614:debug:main only one arch supported, so not adding the default universal variant
615:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
616:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
617:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
618:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
619:debug:main No need to upgrade! xorg-randrproto 1.4.0_0 >= xorg-randrproto 1.4.0_0
620:debug:main epoch: in tree: 0 installed: 0
621:debug:main xorg-libXxf86vm 1.1.3_1 exists in the ports tree
622:debug:main xorg-libXxf86vm 1.1.3_1  is the latest installed
623:debug:main xorg-libXxf86vm 1.1.3_1  is active
624:debug:main Merging existing variants '' into variants
625:debug:main new fully merged portvariants:
626:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libXxf86vm
627:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
628:debug:main adding the default universal variant
629:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
630:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
631:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
632:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
633:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
634:debug:main No need to upgrade! xorg-libXxf86vm 1.1.3_1 >= xorg-libXxf86vm 1.1.3_1
635:debug:main epoch: in tree: 0 installed: 0
636:debug:main xorg-xf86vidmodeproto 2.3.1_0 exists in the ports tree
637:debug:main xorg-xf86vidmodeproto 2.3.1_0  is the latest installed
638:debug:main xorg-xf86vidmodeproto 2.3.1_0  is active
639:debug:main Merging existing variants '' into variants
640:debug:main new fully merged portvariants:
641:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-xf86vidmodeproto
642:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
643:debug:main only one arch supported, so not adding the default universal variant
644:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
645:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
646:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
647:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
648:debug:main No need to upgrade! xorg-xf86vidmodeproto 2.3.1_0 >= xorg-xf86vidmodeproto 2.3.1_0
649:debug:main epoch: in tree: 0 installed: 0
650:debug:main freetype 2.5.3_1 exists in the ports tree
651:debug:main freetype 2.5.3_1  is the latest installed
652:debug:main freetype 2.5.3_1  is active
653:debug:main Merging existing variants '' into variants
654:debug:main new fully merged portvariants:
655:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/print/freetype
656:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
657:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
658:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
659:debug:main universal variant already exists, so not adding the default one
660:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
661:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
662:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
663:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
664:debug:main No need to upgrade! freetype 2.5.3_1 >= freetype 2.5.3_1
665:debug:main epoch: in tree: 0 installed: 0
666:debug:main libpng 1.6.15_0 exists in the ports tree
667:debug:main libpng 1.6.15_0  is the latest installed
668:debug:main libpng 1.6.15_0  is active
669:debug:main Merging existing variants '' into variants
670:debug:main new fully merged portvariants:
671:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/graphics/libpng
672:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
673:debug:main adding the default universal variant
674:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
675:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
676:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
677:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
678:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
679:debug:main No need to upgrade! libpng 1.6.15_0 >= libpng 1.6.15_0
680:debug:main epoch: in tree: 0 installed: 0
681:debug:main glew 1.11.0_0 exists in the ports tree
682:debug:main glew 1.11.0_0  is the latest installed
683:debug:main glew 1.11.0_0  is active
684:debug:main Merging existing variants '' into variants
685:debug:main new fully merged portvariants:
686:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/graphics/glew
687:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
688:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
689:debug:main universal variant already exists, so not adding the default one
690:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
691:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
692:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
693:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
694:debug:main No need to upgrade! glew 1.11.0_0 >= glew 1.11.0_0
695:debug:main epoch: in tree: 0 installed: 0
696:debug:main py27-numpy 1.9.1_0 exists in the ports tree
697:debug:main py27-numpy 1.9.1_0  is the latest installed
698:debug:main py27-numpy 1.9.1_0  is active
699:debug:main Merging existing variants '' into variants
700:debug:main new fully merged portvariants:
701:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/python/py-numpy
702:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
703:debug:main Re-registering default for build.cmd
704:debug:main Re-registering default for destroot.cmd
705:debug:main Re-registering default for destroot.destdir
706:debug:main Sourcing PortGroup python 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/python-1.0.tcl
707:debug:main Sourcing PortGroup github 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/github-1.0.tcl
708:debug:main adding the default universal variant
709:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
710:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
711:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
712:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
713:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
714:debug:main No need to upgrade! py27-numpy 1.9.1_0 >= py27-numpy 1.9.1_0
715:debug:main epoch: in tree: 0 installed: 0
716:debug:main fftw-3 3.3.4_1 exists in the ports tree
717:debug:main fftw-3 3.3.4_1  is the latest installed
718:debug:main fftw-3 3.3.4_1  is active
719:debug:main Merging existing variants '' into variants
720:debug:main new fully merged portvariants:
721:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/math/fftw-3
722:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
723:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
724:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
725:debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl
726:debug:main Sourcing PortGroup active_variants 1.1 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/active_variants-1.1.tcl
727:debug:main Sourcing PortGroup compilers 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/compilers-1.0.tcl
728:debug:main Sourcing PortGroup mpi 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/mpi-1.0.tcl
729:debug:main compiler clang 600.0.54 not blacklisted because it doesn't match {clang <= 211.10.1}
730:debug:main universal variant already exists, so not adding the default one
731:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
732:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
733:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
734:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
735:debug:main No need to upgrade! fftw-3 3.3.4_1 >= fftw-3 3.3.4_1
736:debug:main epoch: in tree: 0 installed: 0
737:debug:main py27-nose 1.3.1_0 exists in the ports tree
738:debug:main py27-nose 1.3.1_0  is the latest installed
739:debug:main py27-nose 1.3.1_0  is active
740:debug:main Merging existing variants '' into variants
741:debug:main new fully merged portvariants:
742:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/python/py-nose
743:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
744:debug:main Re-registering default for build.cmd
745:debug:main Re-registering default for destroot.cmd
746:debug:main Re-registering default for destroot.destdir
747:debug:main Sourcing PortGroup python 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/python-1.0.tcl
748:debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
749:debug:main only one arch supported, so not adding the default universal variant
750:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
751:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
752:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
753:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
754:debug:main No need to upgrade! py27-nose 1.3.1_0 >= py27-nose 1.3.1_0
755:debug:main epoch: in tree: 0 installed: 0
756:debug:main py27-setuptools 7.0_0 exists in the ports tree
757:debug:main py27-setuptools 7.0_0  is the latest installed
758:debug:main py27-setuptools 7.0_0  is active
759:debug:main Merging existing variants '' into variants
760:debug:main new fully merged portvariants:
761:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/python/py-setuptools
762:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
763:debug:main Re-registering default for build.cmd
764:debug:main Re-registering default for destroot.cmd
765:debug:main Re-registering default for destroot.destdir
766:debug:main Sourcing PortGroup python 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/python-1.0.tcl
767:debug:main only one arch supported, so not adding the default universal variant
768:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
769:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
770:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
771:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
772:debug:main No need to upgrade! py27-setuptools 7.0_0 >= py27-setuptools 7.0_0
773:debug:main epoch: in tree: 0 installed: 0
774:debug:main nosetests_select 0.1_0 exists in the ports tree
775:debug:main nosetests_select 0.1_0  is the latest installed
776:debug:main nosetests_select 0.1_0  is active
777:debug:main Merging existing variants '' into variants
778:debug:main new fully merged portvariants:
779:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/python/nosetests_select
780:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
781:debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
782:debug:main universal_variant is false, so not adding the default universal variant
783:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
784:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
785:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
786:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
787:debug:main No need to upgrade! nosetests_select 0.1_0 >= nosetests_select 0.1_0
788:debug:main epoch: in tree: 0 installed: 0
789:debug:main py27-cython 0.21.1_0 exists in the ports tree
790:debug:main py27-cython 0.21.1_0  is the latest installed
791:debug:main py27-cython 0.21.1_0  is active
792:debug:main Merging existing variants '' into variants
793:debug:main new fully merged portvariants:
794:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/python/py-cython
795:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
796:debug:main Re-registering default for build.cmd
797:debug:main Re-registering default for destroot.cmd
798:debug:main Re-registering default for destroot.destdir
799:debug:main Sourcing PortGroup python 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/python-1.0.tcl
800:debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
801:debug:main adding the default universal variant
802:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
803:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
804:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
805:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
806:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
807:debug:main No need to upgrade! py27-cython 0.21.1_0 >= py27-cython 0.21.1_0
808:debug:main epoch: in tree: 0 installed: 0
809:debug:main cython_select 0.1_0 exists in the ports tree
810:debug:main cython_select 0.1_0  is the latest installed
811:debug:main cython_select 0.1_0  is active
812:debug:main Merging existing variants '' into variants
813:debug:main new fully merged portvariants:
814:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/python/cython_select
815:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
816:debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
817:debug:main universal_variant is false, so not adding the default universal variant
818:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
819:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
820:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
821:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
822:debug:main No need to upgrade! cython_select 0.1_0 >= cython_select 0.1_0
823:debug:main epoch: in tree: 0 installed: 0
824:debug:main py27-pmw 1.3.3a_0 exists in the ports tree
825:debug:main py27-pmw 1.3.3a_0  is the latest installed
826:debug:main py27-pmw 1.3.3a_0  is active
827:debug:main Merging existing variants '' into variants
828:debug:main new fully merged portvariants:
829:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/python/py-pmw
830:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
831:debug:main Re-registering default for build.cmd
832:debug:main Re-registering default for destroot.cmd
833:debug:main Re-registering default for destroot.destdir
834:debug:main Sourcing PortGroup python 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/python-1.0.tcl
835:debug:main only one arch supported, so not adding the default universal variant
836:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
837:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
838:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
839:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
840:debug:main No need to upgrade! py27-pmw 1.3.3a_0 >= py27-pmw 1.3.3a_0
841:debug:main epoch: in tree: 0 installed: 0
842:debug:main py27-tkinter 2.7.8_2 exists in the ports tree
843:debug:main py27-tkinter 2.7.8_2  is the latest installed
844:debug:main py27-tkinter 2.7.8_2  is active
845:debug:main Merging existing variants '' into variants
846:debug:main new fully merged portvariants:
847:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/python/py-tkinter
848:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
849:debug:main Re-registering default for build.cmd
850:debug:main Re-registering default for destroot.cmd
851:debug:main Re-registering default for destroot.destdir
852:debug:main Sourcing PortGroup python 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/python-1.0.tcl
853:debug:main adding the default universal variant
854:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
855:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
856:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
857:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
858:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
859:debug:main No need to upgrade! py27-tkinter 2.7.8_2 >= py27-tkinter 2.7.8_2
860:debug:main epoch: in tree: 0 installed: 0
861:debug:main tk 8.6.1_2 exists in the ports tree
862:debug:main tk 8.6.1_2 +quartz is the latest installed
863:debug:main tk 8.6.1_2 +quartz is active
864:debug:main Merging existing variants '+quartz' into variants
865:debug:main new fully merged portvariants: quartz +
866:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/tk
867:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
868:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
869:debug:main adding the default universal variant
870:debug:main Executing variant quartz provides quartz
871:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
872:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
873:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
874:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
875:debug:main No need to upgrade! tk 8.6.1_2 >= tk 8.6.1_2
876:debug:main epoch: in tree: 0 installed: 0
877:debug:main tcl 8.6.1_0 exists in the ports tree
878:debug:main tcl 8.6.1_0 +corefoundation+threads is the latest installed
879:debug:main tcl 8.6.1_0 +corefoundation+threads is active
880:debug:main Merging existing variants '+corefoundation+threads' into variants
881:debug:main new fully merged portvariants: corefoundation + threads +
882:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/lang/tcl
883:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
884:debug:main adding the default universal variant
885:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
886:debug:main Executing variant threads provides threads
887:debug:main Executing variant corefoundation provides corefoundation
888:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
889:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
890:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
891:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
892:debug:main No need to upgrade! tcl 8.6.1_0 >= tcl 8.6.1_0
893:debug:main epoch: in tree: 0 installed: 0
894:debug:main py27-scipy 0.14.0_0 exists in the ports tree
895:debug:main py27-scipy 0.14.0_0 +gcc48 is the latest installed
896:debug:main py27-scipy 0.14.0_0 +gcc48 is active
897:debug:main Merging existing variants '+gcc48' into variants
898:debug:main new fully merged portvariants: gcc48 +
899:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/python/py-scipy
900:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
901:debug:main Re-registering default for build.cmd
902:debug:main Re-registering default for destroot.cmd
903:debug:main Re-registering default for destroot.destdir
904:debug:main Sourcing PortGroup python 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/python-1.0.tcl
905:debug:main Sourcing PortGroup active_variants 1.1 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/active_variants-1.1.tcl
906:debug:main universal_variant is false, so not adding the default universal variant
907:debug:main Executing variant gcc48 provides gcc48
908:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
909:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
910:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
911:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
912:debug:main No need to upgrade! py27-scipy 0.14.0_0 >= py27-scipy 0.14.0_0
913:debug:main epoch: in tree: 20120107 installed: 20120107
914:debug:main SuiteSparse 4.2.1_3 exists in the ports tree
915:debug:main SuiteSparse 4.2.1_3  is the latest installed
916:debug:main SuiteSparse 4.2.1_3  is active
917:debug:main Merging existing variants '' into variants
918:debug:main new fully merged portvariants:
919:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/math/SuiteSparse
920:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
921:debug:main Sourcing PortGroup active_variants 1.1 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/active_variants-1.1.tcl
922:debug:main Sourcing PortGroup compilers 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/compilers-1.0.tcl
923:debug:main adding the default universal variant
924:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
925:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
926:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
927:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
928:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
929:debug:main No need to upgrade! SuiteSparse 4.2.1_3 >= SuiteSparse 4.2.1_3
930:debug:main epoch: in tree: 0 installed: 0
931:debug:main swig-python 3.0.2_0 exists in the ports tree
932:debug:main swig-python 3.0.2_0  is the latest installed
933:debug:main swig-python 3.0.2_0  is active
934:debug:main Merging existing variants '' into variants
935:debug:main new fully merged portvariants:
936:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/swig
937:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
938:debug:main adding the default universal variant
939:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
940:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
941:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
942:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
943:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
944:debug:main No need to upgrade! swig-python 3.0.2_0 >= swig-python 3.0.2_0
945:debug:main epoch: in tree: 0 installed: 0
946:debug:main swig 3.0.2_0 exists in the ports tree
947:debug:main swig 3.0.2_0  is the latest installed
948:debug:main swig 3.0.2_0  is active
949:debug:main Merging existing variants '' into variants
950:debug:main new fully merged portvariants:
951:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/swig
952:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
953:debug:main adding the default universal variant
954:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
955:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
956:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
957:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
958:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
959:debug:main No need to upgrade! swig 3.0.2_0 >= swig 3.0.2_0
960:debug:main epoch: in tree: 0 installed: 0
961:debug:main pcre 8.36_0 exists in the ports tree
962:debug:main pcre 8.36_0  is the latest installed
963:debug:main pcre 8.36_0  is active
964:debug:main Merging existing variants '' into variants
965:debug:main new fully merged portvariants:
966:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/pcre
967:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
968:debug:main adding the default universal variant
969:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
970:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
971:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
972:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
973:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
974:debug:main No need to upgrade! pcre 8.36_0 >= pcre 8.36_0
975:debug:main epoch: in tree: 2 installed: 2
976:debug:main libgcc 4.9.2_1 exists in the ports tree
977:debug:main libgcc 4.9.2_1  is the latest installed
978:debug:main libgcc 4.9.2_1  is active
979:debug:main Merging existing variants '' into variants
980:debug:main new fully merged portvariants:
981:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/lang/gcc49
982:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
983:debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
984:debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl
985:debug:main compiler llvm-gcc-4.2 blacklisted because it's not installed or it doesn't work
986:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
987:debug:main universal variant already exists, so not adding the default one
988:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
989:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
990:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
991:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
992:debug:main No need to upgrade! libgcc 4.9.2_1 >= libgcc 4.9.2_1
993:debug:main epoch: in tree: 0 installed: 0
994:debug:main cctools 855_1 exists in the ports tree
995:debug:main cctools 855_1 +llvm35 is the latest installed
996:debug:main cctools 855_1 +llvm35 is active
997:debug:main Merging existing variants '+llvm35' into variants
998:debug:main new fully merged portvariants: llvm35 +
999:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/cctools
1000:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
1001:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
1002:debug:main universal variant already exists, so not adding the default one
1003:debug:main Executing variant llvm35 provides llvm35
1004:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1005:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1006:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1007:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1008:debug:main No need to upgrade! cctools 855_1 >= cctools 855_1
1009:debug:main epoch: in tree: 0 installed: 0
1010:debug:main cctools-headers 855_0 exists in the ports tree
1011:debug:main cctools-headers 855_0  is the latest installed
1012:debug:main cctools-headers 855_0  is active
1013:debug:main Merging existing variants '' into variants
1014:debug:main new fully merged portvariants:
1015:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/cctools-headers
1016:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
1017:debug:main universal_variant is false, so not adding the default universal variant
1018:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1019:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1020:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1021:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1022:debug:main No need to upgrade! cctools-headers 855_0 >= cctools-headers 855_0
1023:debug:main epoch: in tree: 1 installed: 1
1024:debug:main llvm-3.5 3.5.0_0 exists in the ports tree
1025:debug:main llvm-3.5 3.5.0_0 +assertions is the latest installed
1026:debug:main llvm-3.5 3.5.0_0 +assertions is active
1027:debug:main Merging existing variants '+assertions' into variants
1028:debug:main new fully merged portvariants: assertions +
1029:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/lang/llvm-3.5
1030:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
1031:debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
1032:debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl
1033:debug:main compiler clang 600.0.54 not blacklisted because it doesn't match {clang < 425.0.24}
1034:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
1035:debug:main universal variant already exists, so not adding the default one
1036:debug:main Executing variant assertions provides assertions
1037:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1038:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1039:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1040:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1041:debug:main No need to upgrade! llvm-3.5 3.5.0_0 >= llvm-3.5 3.5.0_0
1042:debug:main epoch: in tree: 0 installed: 0
1043:debug:main libffi 3.2.1_0 exists in the ports tree
1044:debug:main libffi 3.2.1_0  is the latest installed
1045:debug:main libffi 3.2.1_0  is active
1046:debug:main Merging existing variants '' into variants
1047:debug:main new fully merged portvariants:
1048:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/libffi
1049:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
1050:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
1051:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
1052:debug:main universal variant already exists, so not adding the default one
1053:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1054:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1055:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1056:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1057:debug:main No need to upgrade! libffi 3.2.1_0 >= libffi 3.2.1_0
1058:debug:main epoch: in tree: 0 installed: 0
1059:debug:main libcxx 183506_1 exists in the ports tree
1060:debug:main libcxx 183506_1  is the latest installed
1061:debug:main libcxx 183506_1  is active
1062:debug:main Merging existing variants '' into variants
1063:debug:main new fully merged portvariants:
1064:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/lang/libcxx
1065:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
1066:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
1067:debug:main universal variant already exists, so not adding the default one
1068:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1069:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1070:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1071:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1072:debug:main No need to upgrade! libcxx 183506_1 >= libcxx 183506_1
1073:debug:main epoch: in tree: 0 installed: 0
1074:debug:main perl5 5.12.4_0 exists in the ports tree
1075:debug:main perl5 5.12.4_0 +perl5_16 is the latest installed
1076:debug:main perl5 5.12.4_0 +perl5_16 is active
1077:debug:main Merging existing variants '+perl5_16' into variants
1078:debug:main new fully merged portvariants: perl5_16 +
1079:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/lang/perl5
1080:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
1081:debug:main universal_variant is false, so not adding the default universal variant
1082:debug:main Executing variant perl5_16 provides perl5_16
1083:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1084:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1085:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1086:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1087:debug:main No need to upgrade! perl5 5.12.4_0 >= perl5 5.12.4_0
1088:debug:main epoch: in tree: 0 installed: 0
1089:debug:main perl5.16 5.16.3_0 exists in the ports tree
1090:debug:main perl5.16 5.16.3_0  is the latest installed
1091:debug:main perl5.16 5.16.3_0  is active
1092:debug:main Merging existing variants '' into variants
1093:debug:main new fully merged portvariants:
1094:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/lang/perl5.16
1095:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
1096:debug:main adding the default universal variant
1097:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
1098:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1099:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1100:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1101:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1102:debug:main No need to upgrade! perl5.16 5.16.3_0 >= perl5.16 5.16.3_0
1103:debug:main epoch: in tree: 0 installed: 0
1104:debug:main gdbm 1.11_1 exists in the ports tree
1105:debug:main gdbm 1.11_1  is the latest installed
1106:debug:main gdbm 1.11_1  is active
1107:debug:main Merging existing variants '' into variants
1108:debug:main new fully merged portvariants:
1109:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/databases/gdbm
1110:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
1111:debug:main adding the default universal variant
1112:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
1113:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1114:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1115:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1116:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1117:debug:main No need to upgrade! gdbm 1.11_1 >= gdbm 1.11_1
1118:debug:main epoch: in tree: 0 installed: 0
1119:debug:main llvm_select 1.0_0 exists in the ports tree
1120:debug:main llvm_select 1.0_0  is the latest installed
1121:debug:main llvm_select 1.0_0  is active
1122:debug:main Merging existing variants '' into variants
1123:debug:main new fully merged portvariants:
1124:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/sysutils/llvm_select
1125:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
1126:debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
1127:debug:main universal_variant is false, so not adding the default universal variant
1128:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1129:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1130:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1131:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1132:debug:main No need to upgrade! llvm_select 1.0_0 >= llvm_select 1.0_0
1133:debug:main epoch: in tree: 1 installed: 1
1134:debug:main cloog 0.18.2_2 exists in the ports tree
1135:debug:main cloog 0.18.2_2  is the latest installed
1136:debug:main cloog 0.18.2_2  is active
1137:debug:main Merging existing variants '' into variants
1138:debug:main new fully merged portvariants:
1139:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/cloog
1140:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
1141:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
1142:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
1143:debug:main universal variant already exists, so not adding the default one
1144:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1145:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1146:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1147:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1148:debug:main No need to upgrade! cloog 0.18.2_2 >= cloog 0.18.2_2
1149:debug:main epoch: in tree: 0 installed: 0
1150:debug:main gmp 6.0.0_1 exists in the ports tree
1151:debug:main gmp 6.0.0_1  is the latest installed
1152:debug:main gmp 6.0.0_1  is active
1153:debug:main Merging existing variants '' into variants
1154:debug:main new fully merged portvariants:
1155:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/gmp
1156:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
1157:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
1158:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
1159:debug:main universal variant already exists, so not adding the default one
1160:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1161:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1162:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1163:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1164:debug:main No need to upgrade! gmp 6.0.0_1 >= gmp 6.0.0_1
1165:debug:main epoch: in tree: 2 installed: 2
1166:debug:main isl 0.14_2 exists in the ports tree
1167:debug:main isl 0.14_2  is the latest installed
1168:debug:main isl 0.14_2  is active
1169:debug:main Merging existing variants '' into variants
1170:debug:main new fully merged portvariants:
1171:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/isl
1172:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
1173:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
1174:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
1175:debug:main universal variant already exists, so not adding the default one
1176:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1177:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1178:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1179:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1180:debug:main No need to upgrade! isl 0.14_2 >= isl 0.14_2
1181:debug:main epoch: in tree: 1 installed: 1
1182:debug:main ld64 236.3_1 exists in the ports tree
1183:debug:main ld64 236.3_1 +llvm35 is the latest installed
1184:debug:main ld64 236.3_1 +llvm35 is active
1185:debug:main Merging existing variants '+llvm35' into variants
1186:debug:main new fully merged portvariants: llvm35 +
1187:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/ld64
1188:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
1189:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
1190:debug:main universal variant already exists, so not adding the default one
1191:debug:main Executing variant llvm35 provides llvm35
1192:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1193:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1194:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1195:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1196:debug:main No need to upgrade! ld64 236.3_1 >= ld64 236.3_1
1197:debug:main epoch: in tree: 0 installed: 0
1198:debug:main libmpc 1.0.2_1 exists in the ports tree
1199:debug:main libmpc 1.0.2_1  is the latest installed
1200:debug:main libmpc 1.0.2_1  is active
1201:debug:main Merging existing variants '' into variants
1202:debug:main new fully merged portvariants:
1203:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/libmpc
1204:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
1205:debug:main adding the default universal variant
1206:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
1207:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1208:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1209:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1210:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1211:debug:main No need to upgrade! libmpc 1.0.2_1 >= libmpc 1.0.2_1
1212:debug:main epoch: in tree: 0 installed: 0
1213:debug:main mpfr 3.1.2-p10_3 exists in the ports tree
1214:debug:main mpfr 3.1.2-p10_3  is the latest installed
1215:debug:main mpfr 3.1.2-p10_3  is active
1216:debug:main Merging existing variants '' into variants
1217:debug:main new fully merged portvariants:
1218:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/mpfr
1219:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
1220:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
1221:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
1222:debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl
1223:debug:main compiler clang 600.0.54 not blacklisted because it doesn't match {clang == 211.10.1}
1224:debug:main universal variant already exists, so not adding the default one
1225:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1226:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1227:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1228:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1229:debug:main No need to upgrade! mpfr 3.1.2-p10_3 >= mpfr 3.1.2-p10_3
1230:debug:main epoch: in tree: 0 installed: 0
1231:debug:main gcc_select 0.1_8 exists in the ports tree
1232:debug:main gcc_select 0.1_8  is the latest installed
1233:debug:main gcc_select 0.1_8  is active
1234:debug:main Merging existing variants '' into variants
1235:debug:main new fully merged portvariants:
1236:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/sysutils/gcc_select
1237:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
1238:debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
1239:debug:main universal_variant is false, so not adding the default universal variant
1240:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1241:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1242:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1243:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1244:debug:main No need to upgrade! gcc_select 0.1_8 >= gcc_select 0.1_8
1245:debug:main epoch: in tree: 0 installed: 0
1246:debug:main xdpyinfo 1.3.1_0 exists in the ports tree
1247:debug:main xdpyinfo 1.3.1_0  is the latest installed
1248:debug:main xdpyinfo 1.3.1_0  is active
1249:debug:main Merging existing variants '' into variants
1250:debug:main new fully merged portvariants:
1251:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xdpyinfo
1252:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
1253:debug:main adding the default universal variant
1254:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
1255:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1256:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1257:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1258:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1259:debug:main No need to upgrade! xdpyinfo 1.3.1_0 >= xdpyinfo 1.3.1_0
1260:debug:main epoch: in tree: 0 installed: 0
1261:debug:main xorg-libXinerama 1.1.3_0 exists in the ports tree
1262:debug:main xorg-libXinerama 1.1.3_0  is the latest installed
1263:debug:main xorg-libXinerama 1.1.3_0  is active
1264:debug:main Merging existing variants '' into variants
1265:debug:main new fully merged portvariants:
1266:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libXinerama
1267:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
1268:debug:main adding the default universal variant
1269:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
1270:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1271:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1272:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1273:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1274:debug:main No need to upgrade! xorg-libXinerama 1.1.3_0 >= xorg-libXinerama 1.1.3_0
1275:debug:main epoch: in tree: 0 installed: 0
1276:debug:main xorg-xineramaproto 1.2.1_0 exists in the ports tree
1277:debug:main xorg-xineramaproto 1.2.1_0  is the latest installed
1278:debug:main xorg-xineramaproto 1.2.1_0  is active
1279:debug:main Merging existing variants '' into variants
1280:debug:main new fully merged portvariants:
1281:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-xineramaproto
1282:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
1283:debug:main only one arch supported, so not adding the default universal variant
1284:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1285:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1286:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1287:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1288:debug:main No need to upgrade! xorg-xineramaproto 1.2.1_0 >= xorg-xineramaproto 1.2.1_0
1289:debug:main epoch: in tree: 0 installed: 0
1290:debug:main xorg-libXtst 1.2.2_0 exists in the ports tree
1291:debug:main xorg-libXtst 1.2.2_0  is the latest installed
1292:debug:main xorg-libXtst 1.2.2_0  is active
1293:debug:main Merging existing variants '' into variants
1294:debug:main new fully merged portvariants:
1295:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libXtst
1296:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
1297:debug:main adding the default universal variant
1298:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
1299:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1300:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1301:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1302:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1303:debug:main No need to upgrade! xorg-libXtst 1.2.2_0 >= xorg-libXtst 1.2.2_0
1304:debug:main epoch: in tree: 0 installed: 0
1305:debug:main xorg-recordproto 1.14.2_0 exists in the ports tree
1306:debug:main xorg-recordproto 1.14.2_0  is the latest installed
1307:debug:main xorg-recordproto 1.14.2_0  is active
1308:debug:main Merging existing variants '' into variants
1309:debug:main new fully merged portvariants:
1310:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-recordproto
1311:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
1312:debug:main only one arch supported, so not adding the default universal variant
1313:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1314:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1315:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1316:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1317:debug:main No need to upgrade! xorg-recordproto 1.14.2_0 >= xorg-recordproto 1.14.2_0
1318:debug:main epoch: in tree: 0 installed: 0
1319:debug:main xorg-libdmx 1.1.3_0 exists in the ports tree
1320:debug:main xorg-libdmx 1.1.3_0  is the latest installed
1321:debug:main xorg-libdmx 1.1.3_0  is active
1322:debug:main Merging existing variants '' into variants
1323:debug:main new fully merged portvariants:
1324:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libdmx
1325:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
1326:debug:main adding the default universal variant
1327:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
1328:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1329:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1330:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1331:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1332:debug:main No need to upgrade! xorg-libdmx 1.1.3_0 >= xorg-libdmx 1.1.3_0
1333:debug:main epoch: in tree: 0 installed: 0
1334:debug:main xorg-dmxproto 2.3.1_0 exists in the ports tree
1335:debug:main xorg-dmxproto 2.3.1_0  is the latest installed
1336:debug:main xorg-dmxproto 2.3.1_0  is active
1337:debug:main Merging existing variants '' into variants
1338:debug:main new fully merged portvariants:
1339:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-dmxproto
1340:debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386
1341:debug:main only one arch supported, so not adding the default universal variant
1342:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
1343:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
1344:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
1345:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
1346:debug:main No need to upgrade! xorg-dmxproto 2.3.1_0 >= xorg-dmxproto 2.3.1_0
1347:msg:main --->  Computing dependencies for pymol:info:main .:debug:main pymol has no conflicts
1348:debug:main Found Dependency: path: /usr/bin filename: svn regex: ^svn$
1349:debug:main Searching for dependency: subversion
1350:debug:main Didn't find receipt, going to depspec regex for: subversion
1351:debug:main Found Dependency: path: /usr/bin filename: svn regex: ^svn$
1352:debug:main Searching for dependency: python27
1353:debug:main Found Dependency: receipt exists for python27
1354:debug:main Searching for dependency: freeglut
1355:debug:main Found Dependency: receipt exists for freeglut
1356:debug:main Searching for dependency: freetype
1357:debug:main Found Dependency: receipt exists for freetype
1358:debug:main Searching for dependency: glew
1359:debug:main Found Dependency: receipt exists for glew
1360:debug:main Searching for dependency: libpng
1361:debug:main Found Dependency: receipt exists for libpng
1362:debug:main Searching for dependency: mesa
1363:debug:main Found Dependency: receipt exists for mesa
1364:debug:main Searching for dependency: py27-numpy
1365:debug:main Found Dependency: receipt exists for py27-numpy
1366:debug:main Searching for dependency: py27-pmw
1367:debug:main Found Dependency: receipt exists for py27-pmw
1368:debug:main Searching for dependency: py27-scipy
1369:debug:main Found Dependency: receipt exists for py27-scipy
1370:debug:main Searching for dependency: py27-tkinter
1371:debug:main Found Dependency: receipt exists for py27-tkinter
1372:debug:main Searching for dependency: xdpyinfo
1373:debug:main Found Dependency: receipt exists for xdpyinfo
1374:msg:main
1375:debug:main Executing org.macports.main (pymol)
1376:debug:main changing euid/egid - current euid: 0 - current egid: 0
1377:debug:main egid changed to: 501
1378:debug:main euid changed to: 502
1379:debug:archivefetch archivefetch phase started at Tue Dec  9 22:48:16 MSK 2014
1380:msg:archivefetch --->  Fetching archive for pymol
1381:debug:archivefetch Executing proc-pre-org.macports.archivefetch-archivefetch-0
1382:debug:archivefetch Active variants check for archivefetch-type install considers depends_lib depends_run: python27 freeglut freetype glew libpng mesa py27-numpy py27-pmw py27-scipy py27-tkinter xdpyinfo
1383:debug:archivefetch Ignoring active_variants requirement for tcl because archivefetch-type install only considers depends_lib depends_run and those do not contain tcl
1384:debug:archivefetch Ignoring active_variants requirement for tk because archivefetch-type install only considers depends_lib depends_run and those do not contain tk
1385:debug:archivefetch Executing org.macports.archivefetch (pymol)
1386:debug:archivefetch euid/egid changed to: 0/0
1387:debug:archivefetch chowned /opt/local/var/macports/incoming to macports
1388:debug:archivefetch euid/egid changed to: 502/501
1389:info:archivefetch --->  pymol-1.7.1.1_1.darwin_14.x86_64.tbz2 doesn't seem to exist in /opt/local/var/macports/incoming/verified
1390:msg:archivefetch --->  Attempting to fetch pymol-1.7.1.1_1.darwin_14.x86_64.tbz2 from http://nue.de.packages.macports.org/macports/packages/pymol
1391:debug:archivefetch Fetching archive failed:: The requested URL returned error: 404 Not Found
1392:msg:archivefetch --->  Attempting to fetch pymol-1.7.1.1_1.darwin_14.x86_64.tbz2 from http://lil.fr.packages.macports.org/pymol
1393:debug:archivefetch Fetching archive failed:: The requested URL returned error: 404 Not Found
1394:msg:archivefetch --->  Attempting to fetch pymol-1.7.1.1_1.darwin_14.x86_64.tbz2 from http://packages.macports.org/pymol
1395:debug:archivefetch Fetching archive failed:: The requested URL returned error: 404 Not Found
1396:debug:archivefetch Privilege de-escalation not attempted as not running as root.
1397:debug:fetch fetch phase started at Tue Dec  9 22:48:47 MSK 2014
1398:notice:fetch --->  Fetching distfiles for pymol
1399:debug:fetch Can't run fetch on this port without elevated privileges. Escalating privileges back to root.
1400:debug:fetch euid changed to: 0. egid changed to: 0.
1401:debug:fetch changing euid/egid - current euid: 0 - current egid: 0
1402:debug:fetch egid changed to: 501
1403:debug:fetch euid changed to: 502
1404:debug:fetch Executing org.macports.fetch (pymol)
1405:debug:fetch Environment:
1406CC_PRINT_OPTIONS='YES'
1407CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/.CC_PRINT_OPTIONS'
1408CPATH='/opt/local/include'
1409LIBRARY_PATH='/opt/local/lib'
1410MACOSX_DEPLOYMENT_TARGET='10.10'
1411:debug:fetch Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work" && /usr/bin/svn --non-interactive --trust-server-cert export https://svn.code.sf.net/p/pymol/code/trunk/pymol@4074'
1412:debug:fetch Executing command line:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work" && /usr/bin/svn --non-interactive --trust-server-cert export https://svn.code.sf.net/p/pymol/code/trunk/pymol@4074 2>&1
1413:info:fetch A    pymol
1414:info:fetch A    pymol/test
1415:info:fetch A    pymol/test/headerTest.py
1416:info:fetch A    pymol/test/show
1417:info:fetch A    pymol/test/cyg
1418:info:fetch A    pymol/test/trim.py
1419:info:fetch A    pymol/test/run
1420:info:fetch A    pymol/test/win.py
1421:info:fetch A    pymol/test/inp
1422:info:fetch A    pymol/test/inp/B08.py
1423:info:fetch A    pymol/test/inp/C0200feedback.pml
1424:info:fetch A    pymol/test/inp/C0300session.pml
1425:info:fetch A    pymol/test/inp/M0010load.pml
1426:info:fetch A    pymol/test/inp/C0201extend.pml
1427:info:fetch A    pymol/test/inp/M0025view.pml
1428:info:fetch A    pymol/test/inp/C0740multipdb.pml
1429:info:fetch A    pymol/test/inp/C0050multi.pml
1430:info:fetch A    pymol/test/inp/L0010ccp4read.pml
1431:info:fetch A    pymol/test/inp/C1060controlling.py
1432:info:fetch A    pymol/test/inp/T02.py
1433:info:fetch A    pymol/test/inp/M0001new.pml
1434:info:fetch A    pymol/test/inp/C2000returns.py
1435:info:fetch A    pymol/test/inp/M0053session.pml
1436:info:fetch A    pymol/test/inp/C0170scene.pml
1437:info:fetch A    pymol/test/inp/C1020querying.pml
1438:info:fetch A    pymol/test/inp/M0020multi.pml
1439:info:fetch A    pymol/test/inp/C0060delete.pml
1440:info:fetch A    pymol/test/inp/C0105names.pml
1441:info:fetch A    pymol/test/inp/C1300extras.pml
1442:info:fetch A    pymol/test/inp/C0080create.pml
1443:info:fetch A    pymol/test/inp/C0150alter.pml
1444:info:fetch A    pymol/test/inp/C0800matrices.pml
1445:info:fetch A    pymol/test/inp/L0100isomisc.pml
1446:info:fetch A    pymol/test/inp/C0100select.pml
1447:info:fetch A    pymol/test/inp/B03.py
1448:info:fetch A    pymol/test/inp/C0600util.pml
1449:info:fetch A    pymol/test/inp/C1035wildcards.pml
1450:info:fetch A    pymol/test/inp/B07.py
1451:info:fetch A    pymol/test/inp/C0180embed.pml
1452:info:fetch A    pymol/test/inp/C1200matrix_maps.pml
1453:info:fetch A    pymol/test/inp/C0030pkl.pml
1454:info:fetch A    pymol/test/inp/T01.py
1455:info:fetch A    pymol/test/inp/C0021pdbstr.pml
1456:info:fetch A    pymol/test/inp/M0052session.pml
1457:info:fetch A    pymol/test/inp/L0040isomesh2.pml
1458:info:fetch A    pymol/test/inp/M0021multi.pml
1459:info:fetch A    pymol/test/inp/C0020pdb.pml
1460:info:fetch A    pymol/test/inp/L0200electro.pml
1461:info:fetch A    pymol/test/inp/C0550pseudo.pml
1462:info:fetch A    pymol/test/inp/C1090coulomb.pml
1463:info:fetch A    pymol/test/inp/L0020xplorread.pml
1464:info:fetch A    pymol/test/inp/B02.py
1465:info:fetch A    pymol/test/inp/M0041do.pml
1466:info:fetch A    pymol/test/inp/C1030selecting.pml
1467:info:fetch A    pymol/test/inp/C0027mol2.pml
1468:info:fetch A    pymol/test/inp/C0026sdf.pml
1469:info:fetch A    pymol/test/inp/B06.py
1470:info:fetch A    pymol/test/inp/C0181embed.pml
1471:info:fetch A    pymol/test/inp/C0160get.pml
1472:info:fetch A    pymol/test/inp/C1080isomore.pml
1473:info:fetch A    pymol/test/inp/C1070exporting.pml
1474:info:fetch A    pymol/test/inp/C1010helping.pml
1475:info:fetch A    pymol/test/inp/C0025mol.pml
1476:info:fetch A    pymol/test/inp/C0500misc.pml
1477:info:fetch A    pymol/test/inp/U01.pml
1478:info:fetch A    pymol/test/inp/C0140iterate.pml
1479:info:fetch A    pymol/test/inp/M0051session.pml
1480:info:fetch A    pymol/test/inp/T04.py
1481:info:fetch A    pymol/test/inp/C1100do.py
1482:info:fetch A    pymol/test/inp/C1050fitting.py
1483:info:fetch A    pymol/test/inp/C0700odd.pml
1484:info:fetch A    pymol/test/inp/C1095slice.pml
1485:info:fetch A    pymol/test/inp/B01.py
1486:info:fetch A    pymol/test/inp/B11.py
1487:info:fetch A    pymol/test/inp/C0106order.pml
1488:info:fetch A    pymol/test/inp/C0001quit.pml
1489:info:fetch A    pymol/test/inp/B05.py
1490:info:fetch A    pymol/test/inp/B09.py
1491:info:fetch A    pymol/test/inp/C1040editing.pml
1492:info:fetch A    pymol/test/inp/C0202help_python.pml
1493:info:fetch A    pymol/test/inp/C0070rep.pml
1494:info:fetch A    pymol/test/inp/M0050session.pml
1495:info:fetch A    pymol/test/inp/T03.py
1496:info:fetch A    pymol/test/inp/C0010hello.pml
1497:info:fetch A    pymol/test/inp/C1000viewing.pml
1498:info:fetch A    pymol/test/inp/M0002start.pml
1499:info:fetch A    pymol/test/inp/M0030scene.pml
1500:info:fetch A    pymol/test/inp/C1110matrix_mode.pml
1501:info:fetch A    pymol/test/inp/B10.py
1502:info:fetch A    pymol/test/inp/M0040do.pml
1503:info:fetch A    pymol/test/inp/B04.py
1504:info:fetch A    pymol/test/inp/L0030isomesh.pml
1505:info:fetch A    pymol/test/dat
1506:info:fetch A    pymol/test/dat/small03.mol2
1507:info:fetch A    pymol/test/dat/helix_amber.pdb
1508:info:fetch A    pymol/test/dat/water.pdb
1509:info:fetch A    pymol/test/dat/tiny.pdb
1510:info:fetch A    pymol/test/dat/3al1.r3d
1511:info:fetch A    pymol/test/dat/il2.pdb
1512:info:fetch A    pymol/test/dat/pept.pkl
1513:info:fetch A    pymol/test/dat/small01.mol
1514:info:fetch A    pymol/test/dat/pept.r3d
1515:info:fetch A    pymol/test/dat/ligs3d.sdf
1516:info:fetch A    pymol/test/dat/3al1.pdb
1517:info:fetch A    pymol/test/dat/names.pdb
1518:info:fetch A    pymol/test/dat/embed01.p1m
1519:info:fetch A    pymol/test/dat/1tii.pdb
1520:info:fetch A    pymol/test/dat/embed02.p1m
1521:info:fetch A    pymol/test/dat/odd01.pdb
1522:info:fetch A    pymol/test/dat/embed03.p1m
1523:info:fetch A    pymol/test/dat/pept.pdb
1524:info:fetch A    pymol/test/dat/odd02.pdb
1525:info:fetch A    pymol/test/dat/embed04.p1m
1526:info:fetch A    pymol/test/dat/embed05.p1m
1527:info:fetch A    pymol/test/dat/embed06.p1m
1528:info:fetch A    pymol/test/dat/small02.pdb
1529:info:fetch A    pymol/test/ref
1530:info:fetch A    pymol/test/ref/C0025mol.log
1531:info:fetch A    pymol/test/ref/C0500misc.log
1532:info:fetch A    pymol/test/ref/C0700odd.1.pdb
1533:info:fetch A    pymol/test/ref/C0700odd.2.pdb
1534:info:fetch A    pymol/test/ref/U01.log
1535:info:fetch A    pymol/test/ref/C0140iterate.log
1536:info:fetch A    pymol/test/ref/C0700odd.3.pdb
1537:info:fetch A    pymol/test/ref/M0051session.log
1538:info:fetch A    pymol/test/ref/C0700odd.4.pdb
1539:info:fetch A    pymol/test/ref/C2000returns.log
1540:info:fetch A    pymol/test/ref/C0700odd.5.pdb
1541:info:fetch A    pymol/test/ref/C0700odd.6.pdb
1542:info:fetch A    pymol/test/ref/C0700odd.7.pdb
1543:info:fetch A    pymol/test/ref/C0700odd.8.pdb
1544:info:fetch A    pymol/test/ref/C0700odd.9.pdb
1545:info:fetch A    pymol/test/ref/C1050fitting.log
1546:info:fetch A    pymol/test/ref/C0700odd.log
1547:info:fetch A    pymol/test/ref/C1095slice.log
1548:info:fetch A    pymol/test/ref/C0700odd.A.pdb
1549:info:fetch A    pymol/test/ref/C0700odd.B.pdb
1550:info:fetch A    pymol/test/ref/C0700odd.C.pdb
1551:info:fetch A    pymol/test/ref/C0106order.log
1552:info:fetch A    pymol/test/ref/C0700odd.D.pdb
1553:info:fetch A    pymol/test/ref/C0001quit.log
1554:info:fetch A    pymol/test/ref/C0700odd.E.pdb
1555:info:fetch A    pymol/test/ref/C0700odd.F.pdb
1556:info:fetch A    pymol/test/ref/C1040editing.log
1557:info:fetch A    pymol/test/ref/C0070rep.log
1558:info:fetch A    pymol/test/ref/C0202help_python.log
1559:info:fetch A    pymol/test/ref/C1060controlling.log
1560:info:fetch A    pymol/test/ref/M0050session.log
1561:info:fetch A    pymol/test/ref/C0010hello.log
1562:info:fetch A    pymol/test/ref/M0002start.log
1563:info:fetch A    pymol/test/ref/C1000viewing.log
1564:info:fetch A    pymol/test/ref/M0030scene.log
1565:info:fetch A    pymol/test/ref/C1110matrix_mode.log
1566:info:fetch A    pymol/test/ref/M0040do.log
1567:info:fetch A    pymol/test/ref/L0030isomesh.log
1568:info:fetch A    pymol/test/ref/C0300session.log
1569:info:fetch A    pymol/test/ref/C0200feedback.log
1570:info:fetch A    pymol/test/ref/M0010load.log
1571:info:fetch A    pymol/test/ref/C0201extend.log
1572:info:fetch A    pymol/test/ref/M0025view.log
1573:info:fetch A    pymol/test/ref/C0740multipdb.log
1574:info:fetch A    pymol/test/ref/C0080create.1.pdb
1575:info:fetch A    pymol/test/ref/L0010ccp4read.log
1576:info:fetch A    pymol/test/ref/C0050multi.log
1577:info:fetch A    pymol/test/ref/C0080create.2.pdb
1578:info:fetch A    pymol/test/ref/C0150alter.1.pdb
1579:info:fetch A    pymol/test/ref/T01.log
1580:info:fetch A    pymol/test/ref/M0001new.log
1581:info:fetch A    pymol/test/ref/C1100do.log
1582:info:fetch A    pymol/test/ref/C0700.odd.G.pdb
1583:info:fetch A    pymol/test/ref/M0053session.log
1584:info:fetch A    pymol/test/ref/C0170scene.log
1585:info:fetch A    pymol/test/ref/C0700.odd.H.pdb
1586:info:fetch A    pymol/test/ref/M0020multi.log
1587:info:fetch A    pymol/test/ref/C1020querying.log
1588:info:fetch A    pymol/test/ref/C0060delete.log
1589:info:fetch A    pymol/test/ref/C0105names.log
1590:info:fetch A    pymol/test/ref/C1300extras.log
1591:info:fetch A    pymol/test/ref/C0080create.log
1592:info:fetch A    pymol/test/ref/C0150alter.log
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1720:info:fetch A    pymol/layer0/Queue.h
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1727:info:fetch A    pymol/layer0/Pixmap.h
1728:info:fetch A    pymol/layer0/os_limits.h
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1741:info:fetch A    pymol/layer1/Basis.h
1742:info:fetch A    pymol/layer1/CGO.c
1743:info:fetch A    pymol/layer1/CGO.h
1744:info:fetch A    pymol/layer1/Setting.c
1745:info:fetch A    pymol/layer1/Color.c
1746:info:fetch A    pymol/layer1/Movie.c
1747:info:fetch A    pymol/layer1/Setting.h
1748:info:fetch A    pymol/layer1/Color.h
1749:info:fetch A    pymol/layer1/Movie.h
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1752:info:fetch A    pymol/layer1/Ortho.c
1753:info:fetch A    pymol/layer1/Ray.c
1754:info:fetch A    pymol/layer1/Seq.h
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1756:info:fetch A    pymol/layer1/Makefile.delsci
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1767:info:fetch A    pymol/layer1/FontGLUTHel10.c
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1770:info:fetch A    pymol/layer1/TypeFace.c
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1800:info:fetch A    pymol/layer1/Control.h
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1818:info:fetch A    pymol/layer2/DistSet.h
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1820:info:fetch A    pymol/layer2/ObjectSlice.c
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1828:info:fetch A    pymol/layer2/ObjectGadgetRamp.c
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1832:info:fetch A    pymol/layer2/ObjectGadgetRamp.h
1833:info:fetch A    pymol/layer2/RepMesh.h
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1837:info:fetch A    pymol/layer2/ObjectCallback.c
1838:info:fetch A    pymol/layer2/ObjectCallback.h
1839:info:fetch A    pymol/layer2/RepEllipsoid.c
1840:info:fetch A    pymol/layer2/VFont.c
1841:info:fetch A    pymol/layer2/RepDot.c
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1845:info:fetch A    pymol/layer2/RepDot.h
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1847:info:fetch A    pymol/layer2/ObjectMap.c
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1849:info:fetch A    pymol/layer2/Sculpt.c
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1851:info:fetch A    pymol/layer2/RepCartoon.c
1852:info:fetch A    pymol/layer2/RepNonbonded.c
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1855:info:fetch A    pymol/layer2/RepWireBond.c
1856:info:fetch A    pymol/layer2/RepCartoon.h
1857:info:fetch A    pymol/layer2/CoordSet.c
1858:info:fetch A    pymol/layer2/RepNonbonded.h
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1860:info:fetch A    pymol/layer2/RepNonbondedSphere.c
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1863:info:fetch A    pymol/layer2/RepRibbon.h
1864:info:fetch A    pymol/layer2/RepNonbondedSphere.h
1865:info:fetch A    pymol/layer2/ObjectDist.c
1866:info:fetch A    pymol/layer2/ObjectMolecule.c
1867:info:fetch A    pymol/layer2/RepAngle.c
1868:info:fetch A    pymol/layer2/ObjectDist.h
1869:info:fetch A    pymol/layer2/ObjectMolecule.h
1870:info:fetch A    pymol/layer2/RepAngle.h
1871:info:fetch A    pymol/layer2/ObjectAlignment.c
1872:info:fetch A    pymol/layer2/GadgetSet.c
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1876:info:fetch A    pymol/layer2/ObjectGroup.c
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1878:info:fetch A    pymol/layer2/ObjectGadget.h
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1918:info:fetch A    pymol/contrib/uiuc/plugins/molfile_plugin/src/avsplugin.cpp
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2538:info:fetch A    pymol/data/chempy/fragments/nt_ile.pkl
2539:info:fetch A    pymol/data/chempy/fragments/sulfone.pkl
2540:info:fetch A    pymol/data/chempy/fragments/ct_leu.pkl
2541:info:fetch A    pymol/data/chempy/fragments/nt_tyr.pkl
2542:info:fetch A    pymol/data/chempy/fragments/nt_gln.pkl
2543:info:fetch A    pymol/data/chempy/fragments/ct_ala.pkl
2544:info:fetch A    pymol/data/chempy/fragments/met.pkl
2545:info:fetch A    pymol/data/chempy/fragments/nt_lysn.pkl
2546:info:fetch A    pymol/data/chempy/fragments/nt_glu.pkl
2547:info:fetch A    pymol/data/chempy/fragments/nt_argn.pkl
2548:info:fetch A    pymol/data/chempy/fragments/ser.pkl
2549:info:fetch A    pymol/data/chempy/fragments/nt_gly.pkl
2550:info:fetch A    pymol/data/chempy/fragments/ct_lys.pkl
2551:info:fetch A    pymol/data/chempy/fragments/cyclopropane.pkl
2552:info:fetch A    pymol/data/chempy/fragments/cys.pkl
2553:info:fetch A    pymol/data/chempy/fragments/ct_ile.pkl
2554:info:fetch A    pymol/data/chempy/fragments/nt_gluh.pkl
2555:info:fetch A    pymol/data/chempy/fragments/nt_pro.pkl
2556:info:fetch A    pymol/data/chempy/fragments/cyclohexane.pkl
2557:info:fetch A    pymol/data/chempy/fragments/phosphite.pkl
2558:info:fetch A    pymol/data/chempy/fragments/ct_tyr.pkl
2559:info:fetch A    pymol/data/chempy/fragments/nt_trp.pkl
2560:info:fetch A    pymol/data/chempy/fragments/ct_gln.pkl
2561:info:fetch A    pymol/data/chempy/fragments/methanol.pkl
2562:info:fetch A    pymol/data/chempy/fragments/arg.pkl
2563:info:fetch A    pymol/data/chempy/fragments/cyanide.pkl
2564:info:fetch A    pymol/data/chempy/fragments/benzocycloheptane.pkl
2565:info:fetch A    pymol/data/chempy/fragments/phe.pkl
2566:info:fetch A    pymol/data/chempy/fragments/ethylene.pkl
2567:info:fetch A    pymol/data/chempy/fragments/ct_glu.pkl
2568:info:fetch A    pymol/data/chempy/fragments/nhh.pkl
2569:info:fetch A    pymol/data/chempy/fragments/butane.pkl
2570:info:fetch A    pymol/data/chempy/fragments/ct_asph.pkl
2571:info:fetch A    pymol/data/chempy/fragments/ct_gly.pkl
2572:info:fetch A    pymol/data/chempy/fragments/methane.pkl
2573:info:fetch A    pymol/data/chempy/fragments/ct_pro.pkl
2574:info:fetch A    pymol/data/chempy/fragments/benzene.pkl
2575:info:fetch A    pymol/data/chempy/fragments/nt_met.pkl
2576:info:fetch A    pymol/data/chempy/fragments/ace.pkl
2577:info:fetch A    pymol/data/chempy/fragments/nt_ser.pkl
2578:info:fetch A    pymol/data/chempy/fragments/peptide.pkl
2579:info:fetch A    pymol/data/chempy/fragments/ct_trp.pkl
2580:info:fetch A    pymol/data/chempy/fragments/asph.pkl
2581:info:fetch A    pymol/data/chempy/fragments/nitro.pkl
2582:info:fetch A    pymol/data/chempy/fragments/thr.pkl
2583:info:fetch A    pymol/data/chempy/fragments/nt_cys.pkl
2584:info:fetch A    pymol/data/chempy/fragments/realtime.pkl
2585:info:fetch A    pymol/data/chempy/fragments/formaldehyde.pkl
2586:info:fetch A    pymol/data/chempy/fragments/hid.pkl
2587:info:fetch A    pymol/data/chempy/fragments/hie.pkl
2588:info:fetch A    pymol/data/chempy/fragments/nt_arg.pkl
2589:info:fetch A    pymol/data/chempy/fragments/ct_lysn.pkl
2590:info:fetch A    pymol/data/chempy/fragments/ct_met.pkl
2591:info:fetch A    pymol/data/chempy/fragments/ct_argn.pkl
2592:info:fetch A    pymol/data/chempy/fragments/nt_phe.pkl
2593:info:fetch A    pymol/data/chempy/fragments/formic.pkl
2594:info:fetch A    pymol/data/chempy/fragments/ct_ser.pkl
2595:info:fetch A    pymol/data/chempy/fragments/nme.pkl
2596:info:fetch A    pymol/data/chempy/fragments/hip.pkl
2597:info:fetch A    pymol/data/chempy/fragments/asn.pkl
2598:info:fetch A    pymol/data/chempy/fragments/val.pkl
2599:info:fetch A    pymol/data/chempy/fragments/his.pkl
2600:info:fetch A    pymol/data/chempy/fragments/asp.pkl
2601:info:fetch A    pymol/data/chempy/fragments/ct_cys.pkl
2602:info:fetch A    pymol/data/chempy/fragments/lysn.pkl
2603:info:fetch A    pymol/data/chempy/fragments/leu.pkl
2604:info:fetch A    pymol/data/chempy/fragments/ct_gluh.pkl
2605:info:fetch A    pymol/data/chempy/fragments/argn.pkl
2606:info:fetch A    pymol/data/chempy/water.pdb
2607:info:fetch A    pymol/data/chempy/sidechains
2608:info:fetch A    pymol/data/chempy/sidechains/generate1.py
2609:info:fetch A    pymol/data/chempy/sidechains/generate2.py
2610:info:fetch A    pymol/data/chempy/sidechains/sc_bb_dep.pkl
2611:info:fetch A    pymol/data/chempy/sidechains/sc_bb_dep.py
2612:info:fetch A    pymol/data/chempy/sidechains/sc_bb_ind.pkl
2613:info:fetch A    pymol/data/chempy/sidechains/sc_bb_ind.py
2614:info:fetch A    pymol/data/chempy/sidechains/sc_library.pkl
2615:info:fetch A    pymol/data/chempy/tinker
2616:info:fetch A    pymol/data/chempy/tinker/Makefile.delsci
2617:info:fetch A    pymol/data/chempy/tinker/make99_simple.py
2618:info:fetch A    pymol/data/chempy/tinker/parm_simple.dat
2619:info:fetch A    pymol/data/chempy/tinker/parm99_simple.dat
2620:info:fetch A    pymol/data/chempy/tinker/chempy.prm
2621:info:fetch A    pymol/data/chempy/tinker/parm94.dat
2622:info:fetch A    pymol/data/chempy/tinker/parm94_rsm.dat
2623:info:fetch A    pymol/data/chempy/tinker/parm96.dat
2624:info:fetch A    pymol/data/chempy/tinker/parm96_rsm.dat
2625:info:fetch A    pymol/data/chempy/tinker/parm99.dat
2626:info:fetch A    pymol/data/chempy/tinker/make_simple.py
2627:info:fetch A    pymol/data/chempy/tinker/parm_simple.inp
2628:info:fetch A    pymol/data/chempy/tinker/parm99_wld.dat
2629:info:fetch A    pymol/data/shaders
2630:info:fetch A    pymol/data/shaders/bg.vs
2631:info:fetch A    pymol/data/shaders/indicator.fs
2632:info:fetch A    pymol/data/shaders/screen.fs
2633:info:fetch A    pymol/data/shaders/labelscreen.fs
2634:info:fetch A    pymol/data/shaders/label.fs
2635:info:fetch A    pymol/data/shaders/defaultscreen.fs
2636:info:fetch A    pymol/data/shaders/default.fs
2637:info:fetch A    pymol/data/shaders/sphere.fs
2638:info:fetch A    pymol/data/shaders/volume.vs
2639:info:fetch A    pymol/data/shaders/indicator.vs
2640:info:fetch A    pymol/data/shaders/default_es2.fs
2641:info:fetch A    pymol/data/shaders/screen.vs
2642:info:fetch A    pymol/data/shaders/ramp.fs
2643:info:fetch A    pymol/data/shaders/labelscreen.vs
2644:info:fetch A    pymol/data/shaders/label.vs
2645:info:fetch A    pymol/data/shaders/spheredirect.vs
2646:info:fetch A    pymol/data/shaders/sphere_arb_fs.fs
2647:info:fetch A    pymol/data/shaders/anaglyph.fs
2648:info:fetch A    pymol/data/shaders/default.vs
2649:info:fetch A    pymol/data/shaders/defaultscreen.vs
2650:info:fetch A    pymol/data/shaders/compute_fog_color.fs
2651:info:fetch A    pymol/data/shaders/sphere.vs
2652:info:fetch A    pymol/data/shaders/compute_color_for_light.fs
2653:info:fetch A    pymol/data/shaders/cylinder.fs
2654:info:fetch A    pymol/data/shaders/default_es.fs
2655:info:fetch A    pymol/data/shaders/anaglyph_header.fs
2656:info:fetch A    pymol/data/shaders/default_es2.vs
2657:info:fetch A    pymol/data/shaders/ramp.vs
2658:info:fetch A    pymol/data/shaders/cylinder_no_ff.fs
2659:info:fetch A    pymol/data/shaders/shadertext.txt
2660:info:fetch A    pymol/data/shaders/bg.fs
2661:info:fetch A    pymol/data/shaders/cylinder.vs
2662:info:fetch A    pymol/data/shaders/default_es.vs
2663:info:fetch A    pymol/data/shaders/call_compute_color_for_light.fs
2664:info:fetch A    pymol/data/shaders/sphere_arb_vs.vs
2665:info:fetch A    pymol/data/shaders/volume.fs
2666:info:fetch A    pymol/data/tut
2667:info:fetch A    pymol/data/tut/1hpv.pdb
2668:info:fetch A    pymol/NEWS
2669:info:fetch A    pymol/examples
2670:info:fetch A    pymol/examples/devel
2671:info:fetch A    pymol/examples/devel/hole_vmd_tri.pym
2672:info:fetch A    pymol/examples/devel/cgo_axes.py
2673:info:fetch A    pymol/examples/devel/cgo_label_hack.py
2674:info:fetch A    pymol/examples/devel/sd_annotate.pml
2675:info:fetch A    pymol/examples/devel/count_molecules.py
2676:info:fetch A    pymol/examples/devel/particle01.py
2677:info:fetch A    pymol/examples/devel/gl02.py
2678:info:fetch A    pymol/examples/devel/cgo_3Dtext01.py
2679:info:fetch A    pymol/examples/devel/chempy_model02.py
2680:info:fetch A    pymol/examples/devel/xmlrpc02.py
2681:info:fetch A    pymol/examples/devel/importing.py
2682:info:fetch A    pymol/examples/devel/my_ext_gui.py
2683:info:fetch A    pymol/examples/devel/cgo01.py
2684:info:fetch A    pymol/examples/devel/cgo03.py
2685:info:fetch A    pymol/examples/devel/cgo05.py
2686:info:fetch A    pymol/examples/devel/pick_wiz.py
2687:info:fetch A    pymol/examples/devel/cgo07.py
2688:info:fetch A    pymol/examples/devel/sele_wiz.py
2689:info:fetch A    pymol/examples/devel/scenes_to_movie01.pml
2690:info:fetch A    pymol/examples/devel/webgui02.py
2691:info:fetch A    pymol/examples/devel/syncmol.py
2692:info:fetch A    pymol/examples/devel/cam2crd.pym
2693:info:fetch A    pymol/examples/devel/brick01.py
2694:info:fetch A    pymol/examples/devel/extend_demo01.py
2695:info:fetch A    pymol/examples/devel/mutate01.pml
2696:info:fetch A    pymol/examples/devel/link_demo.py
2697:info:fetch A    pymol/examples/devel/mutate02.py
2698:info:fetch A    pymol/examples/devel/gl01.py
2699:info:fetch A    pymol/examples/devel/particle02.py
2700:info:fetch A    pymol/examples/devel/gl03.py
2701:info:fetch A    pymol/examples/devel/tkwindow.py
2702:info:fetch A    pymol/examples/devel/chempy_model01.py
2703:info:fetch A    pymol/examples/devel/xmlrpc01.py
2704:info:fetch A    pymol/examples/devel/demo.sdf
2705:info:fetch A    pymol/examples/devel/chempy_model03.py
2706:info:fetch A    pymol/examples/devel/cgo02.py
2707:info:fetch A    pymol/examples/devel/cgo04.py
2708:info:fetch A    pymol/examples/devel/start_pymol.py
2709:info:fetch A    pymol/examples/devel/cgo06.py
2710:info:fetch A    pymol/examples/devel/cgo08.py
2711:info:fetch A    pymol/examples/devel/povray01.py
2712:info:fetch A    pymol/examples/devel/webgui01.py
2713:info:fetch A    pymol/examples/devel/click_ordered_list.py
2714:info:fetch A    pymol/examples/devel/membrane.py
2715:info:fetch A    pymol/examples/devel/cgo_plane.py
2716:info:fetch A    pymol/examples/chempy
2717:info:fetch A    pymol/examples/chempy/generate_mmff.py
2718:info:fetch A    pymol/examples/chempy/generate_amber.py
2719:info:fetch A    pymol/examples/cookbook
2720:info:fetch A    pymol/examples/cookbook/build_peptide.py
2721:info:fetch A    pymol/examples/cookbook/dali.py
2722:info:fetch A    pymol/examples/cookbook/ss_xfer.pml
2723:info:fetch A    pymol/examples/cookbook/contact.pml
2724:info:fetch A    pymol/examples/cookbook/packing.pml
2725:info:fetch A    pymol/examples/cookbook/seq_match_sele.pml
2726:info:fetch A    pymol/examples/cookbook/multiclip_ray.pml
2727:info:fetch A    pymol/examples/cookbook/packsurf.pml
2728:info:fetch A    pymol/examples/cookbook/density.pml
2729:info:fetch A    pymol/examples/cookbook/groel_es.pml
2730:info:fetch A    pymol/examples/cookbook/ribosome.pml
2731:info:fetch A    pymol/examples/cookbook/area_diff.pml
2732:info:fetch A    pymol/examples/cookbook/scenes2movie.pml
2733:info:fetch A    pymol/examples/cookbook/symsph.py
2734:info:fetch A    pymol/examples/cookbook/ref_frame.pml
2735:info:fetch A    pymol/examples/launching
2736:info:fetch A    pymol/examples/launching/launch.py
2737:info:fetch A    pymol/examples/launching/launch_viewer1.py
2738:info:fetch A    pymol/examples/launching/launch_viewer2.py
2739:info:fetch A    pymol/examples/launching/launch_demo.py
2740:info:fetch A    pymol/examples/launching/launch_no_tk.py
2741:info:fetch A    pymol/examples/launching/README
2742:info:fetch A    pymol/examples/package
2743:info:fetch A    pymol/examples/package/redhat
2744:info:fetch A    pymol/examples/package/redhat/pymol-0.96-1.rh70.py152.spec
2745:info:fetch A    pymol/examples/package/redhat/pymol-0.96-1.rh62.py152.spec
2746:info:fetch A    pymol/examples/package/redhat/pymol-0.93-1.rh72.py21.spec
2747:info:fetch A    pymol/examples/package/redhat/pymol-0.93-1.rh80.py22.spec
2748:info:fetch A    pymol/examples/package/redhat/pymol-0.93-1.rh90.py22.spec
2749:info:fetch A    pymol/examples/package/redhat/pymol-0.93-1.rh73.py22.spec
2750:info:fetch A    pymol/examples/package/redhat/pymol-0.93-1.rh70.py152.spec
2751:info:fetch A    pymol/examples/package/redhat/pymol-0.96-1.rh72.py21.spec
2752:info:fetch A    pymol/examples/package/redhat/pymol-0.96-1.rh80.py22.spec
2753:info:fetch A    pymol/examples/package/redhat/pymol-0.93-1.rh62.py152.spec
2754:info:fetch A    pymol/examples/package/redhat/pymol-0.96-1.rh90.py22.spec
2755:info:fetch A    pymol/examples/package/redhat/pymol-0.96-1.rh73.py22.spec
2756:info:fetch Exported revision 4074.
2757:debug:fetch Privilege de-escalation not attempted as not running as root.
2758:debug:checksum checksum phase started at Tue Dec  9 22:49:13 MSK 2014
2759:notice:checksum --->  Verifying checksums for pymol
2760:debug:checksum Executing org.macports.checksum (pymol)
2761:debug:checksum Privilege de-escalation not attempted as not running as root.
2762:debug:extract extract phase started at Tue Dec  9 22:49:13 MSK 2014
2763:notice:extract --->  Extracting pymol
2764:debug:extract Executing org.macports.extract (pymol)
2765:debug:extract Privilege de-escalation not attempted as not running as root.
2766:debug:patch patch phase started at Tue Dec  9 22:49:13 MSK 2014
2767:debug:patch Executing org.macports.patch (pymol)
2768:notice:patch --->  Applying patches to pymol
2769:info:patch --->  Applying setup_py.diff
2770:debug:patch Environment:
2771CC_PRINT_OPTIONS='YES'
2772CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/.CC_PRINT_OPTIONS'
2773CPATH='/opt/local/include'
2774LIBRARY_PATH='/opt/local/lib'
2775MACOSX_DEPLOYMENT_TARGET='10.10'
2776:debug:patch Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol" && /usr/bin/patch -p0'
2777:debug:patch Executing command line:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol" && /usr/bin/patch -p0 < '/opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/science/pymol/files/setup_py.diff'
2778:info:patch patching file setup.py
2779:info:patch --->  Applying pymol_shell.diff
2780:debug:patch Environment:
2781CC_PRINT_OPTIONS='YES'
2782CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/.CC_PRINT_OPTIONS'
2783CPATH='/opt/local/include'
2784LIBRARY_PATH='/opt/local/lib'
2785MACOSX_DEPLOYMENT_TARGET='10.10'
2786:debug:patch Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol" && /usr/bin/patch -p0'
2787:debug:patch Executing command line:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol" && /usr/bin/patch -p0 < '/opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/science/pymol/files/pymol_shell.diff'
2788:info:patch patching file setup/pymol_macports
2789:info:patch --->  Applying pmg_tk_platform.patch
2790:debug:patch Environment:
2791CC_PRINT_OPTIONS='YES'
2792CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/.CC_PRINT_OPTIONS'
2793CPATH='/opt/local/include'
2794LIBRARY_PATH='/opt/local/lib'
2795MACOSX_DEPLOYMENT_TARGET='10.10'
2796:debug:patch Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol" && /usr/bin/patch -p0'
2797:debug:patch Executing command line:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol" && /usr/bin/patch -p0 < '/opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/science/pymol/files/pmg_tk_platform.patch'
2798:info:patch patching file modules/pmg_tk/skins/normal/__init__.py
2799:info:patch Hunk #1 succeeded at 259 (offset 23 lines).
2800:info:patch Hunk #2 succeeded at 278 (offset 23 lines).
2801:info:patch Hunk #3 succeeded at 305 (offset 23 lines).
2802:info:patch patching file modules/pmg_tk/PMGApp.py
2803:info:patch Hunk #1 succeeded at 203 (offset 19 lines).
2804:info:patch Hunk #2 succeeded at 221 (offset 19 lines).
2805:info:patch --->  Applying apbs-psize.patch
2806:debug:patch Environment:
2807CC_PRINT_OPTIONS='YES'
2808CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/.CC_PRINT_OPTIONS'
2809CPATH='/opt/local/include'
2810LIBRARY_PATH='/opt/local/lib'
2811MACOSX_DEPLOYMENT_TARGET='10.10'
2812:debug:patch Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol" && /usr/bin/patch -p0'
2813:debug:patch Executing command line:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol" && /usr/bin/patch -p0 < '/opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/science/pymol/files/apbs-psize.patch'
2814:info:patch patching file modules/pmg_tk/startup/apbs_tools.py
2815:info:patch --->  Applying apbs_tkinter.patch
2816:debug:patch Environment:
2817CC_PRINT_OPTIONS='YES'
2818CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/.CC_PRINT_OPTIONS'
2819CPATH='/opt/local/include'
2820LIBRARY_PATH='/opt/local/lib'
2821MACOSX_DEPLOYMENT_TARGET='10.10'
2822:debug:patch Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol" && /usr/bin/patch -p0'
2823:debug:patch Executing command line:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol" && /usr/bin/patch -p0 < '/opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/science/pymol/files/apbs_tkinter.patch'
2824:info:patch patching file modules/pmg_tk/startup/apbs_tools.py
2825:info:patch Hunk #12 succeeded at 2284 (offset 4 lines).
2826:info:patch Hunk #13 succeeded at 2335 (offset 4 lines).
2827:info:patch Hunk #14 succeeded at 2352 (offset 4 lines).
2828:info:patch Hunk #15 succeeded at 2372 (offset 4 lines).
2829:info:patch Hunk #16 succeeded at 2394 (offset 4 lines).
2830:info:patch --->  Applying pymol-clang.diff
2831:debug:patch Environment:
2832CC_PRINT_OPTIONS='YES'
2833CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/.CC_PRINT_OPTIONS'
2834CPATH='/opt/local/include'
2835LIBRARY_PATH='/opt/local/lib'
2836MACOSX_DEPLOYMENT_TARGET='10.10'
2837:debug:patch Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol" && /usr/bin/patch -p0'
2838:debug:patch Executing command line:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol" && /usr/bin/patch -p0 < '/opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/science/pymol/files/pymol-clang.diff'
2839:info:patch patching file layer0/ShaderMgr.c
2840:info:patch patching file layer0/Map.c
2841:info:patch patching file layer1/Basis.c
2842:info:patch patching file layer1/CGO.c
2843:info:patch patching file layer1/Ortho.c
2844:info:patch patching file layer1/P.c
2845:info:patch patching file layer1/Extrude.c
2846:info:patch patching file layer1/Scene.c
2847:info:patch patching file layer1/Control.c
2848:info:patch patching file layer2/RepSphere.c
2849:info:patch patching file layer2/ObjectMolecule2.c
2850:info:patch patching file layer2/RepDot.c
2851:info:patch patching file layer2/RepSurface.c
2852:info:patch patching file layer2/RepCartoon.c
2853:info:patch patching file layer2/ObjectMolecule.c
2854:info:patch patching file layer3/Selector.c
2855:info:patch patching file layer3/Executive.c
2856:info:patch patching file layer3/PlugIOManager.c
2857:info:patch patching file layer4/Cmd.c
2858:info:patch patching file contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp
2859:info:patch patching file contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp
2860:info:patch patching file contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c
2861:info:patch patching file contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c
2862:info:patch patching file contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c
2863:info:patch patching file contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp
2864:info:patch patching file contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp
2865:info:patch patching file modules/cealign/src/tnt/tnt_fortran_array1d.h
2866:info:patch patching file modules/cealign/src/tnt/tnt_array1d.h
2867:debug:patch Executing proc-post-org.macports.patch-patch-0
2868:info:patch --->  Patching setup.py: s|@PREFIX@|/opt/local|g
2869:debug:patch Executing reinplace: /usr/bin/sed s|@PREFIX@|/opt/local|g < /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol/setup.py >@ file10 2>@stderr
2870:debug:patch euid/egid changed to: 0/0
2871:debug:patch chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol/setup.py to macports
2872:debug:patch euid/egid changed to: 502/501
2873:debug:patch euid/egid changed to: 0/0
2874:debug:patch setting attributes on /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol/setup.py
2875:debug:patch euid/egid changed to: 502/501
2876:info:patch --->  Patching pymol_macports: s|@@PYTHON_PKGDIR@@|/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages|g
2877:debug:patch Executing reinplace: /usr/bin/sed s|@@PYTHON_PKGDIR@@|/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages|g < /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol/setup/pymol_macports >@ file10 2>@stderr
2878:debug:patch euid/egid changed to: 0/0
2879:debug:patch chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol/setup/pymol_macports to macports
2880:debug:patch euid/egid changed to: 502/501
2881:debug:patch euid/egid changed to: 0/0
2882:debug:patch setting attributes on /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol/setup/pymol_macports
2883:debug:patch euid/egid changed to: 502/501
2884:info:patch --->  Patching pymol_macports: s|@@PYTHON_BINARY@@|/opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7|g
2885:debug:patch Executing reinplace: /usr/bin/sed s|@@PYTHON_BINARY@@|/opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7|g < /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol/setup/pymol_macports >@ file10 2>@stderr
2886:debug:patch euid/egid changed to: 0/0
2887:debug:patch chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol/setup/pymol_macports to macports
2888:debug:patch euid/egid changed to: 502/501
2889:debug:patch euid/egid changed to: 0/0
2890:debug:patch setting attributes on /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol/setup/pymol_macports
2891:debug:patch euid/egid changed to: 502/501
2892:info:patch --->  Patching setup.py: s|"-O3",|"-O3", "-g",|g
2893:debug:patch Executing reinplace: /usr/bin/sed {s|"-O3",|"-O3", "-g",|g} < /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol/setup.py >@ file10 2>@stderr
2894:debug:patch euid/egid changed to: 0/0
2895:debug:patch chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol/setup.py to macports
2896:debug:patch euid/egid changed to: 502/501
2897:debug:patch euid/egid changed to: 0/0
2898:debug:patch setting attributes on /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol/setup.py
2899:debug:patch euid/egid changed to: 502/501
2900:debug:patch Privilege de-escalation not attempted as not running as root.
2901:debug:configure configure phase started at Tue Dec  9 22:49:15 MSK 2014
2902:notice:configure --->  Configuring pymol
2903:debug:configure Using compiler 'Xcode Clang'
2904:debug:configure Executing proc-pre-org.macports.configure-configure-0
2905:debug:configure Found Dependency: path: /usr/bin filename: svn regex: ^svn$
2906:debug:configure Active variants check for source-type install considers depends_fetch depends_extract depends_lib depends_build depends_run: python27 freeglut freetype glew libpng mesa py27-numpy py27-pmw py27-scipy py27-tkinter xdpyinfo
2907:debug:configure Ignoring active_variants requirement for tcl because source-type install only considers depends_fetch depends_extract depends_lib depends_build depends_run and those do not contain tcl
2908:debug:configure Ignoring active_variants requirement for tk because source-type install only considers depends_fetch depends_extract depends_lib depends_build depends_run and those do not contain tk
2909:debug:configure Executing org.macports.configure (pymol)
2910:debug:configure Privilege de-escalation not attempted as not running as root.
2911:debug:build build phase started at Tue Dec  9 22:49:15 MSK 2014
2912:notice:build --->  Building pymol
2913:debug:build Executing proc-pre-org.macports.build-build-0
2914:debug:build Executing org.macports.build (pymol)
2915:debug:build Privilege de-escalation not attempted as not running as root.
2916:debug:destroot destroot phase started at Tue Dec  9 22:49:15 MSK 2014
2917:notice:destroot --->  Staging pymol into destroot
2918:debug:destroot Can't run destroot under sudo without elevated privileges (due to mtree).
2919:debug:destroot Run destroot without sudo to avoid root privileges.
2920:debug:destroot Going to escalate privileges back to root.
2921:debug:destroot euid changed to: 0. egid changed to: 0.
2922:info:destroot . changed
2923:info:destroot  gid expected 0 found 80 modified
2924:info:destroot ./usr missing (created)
2925:info:destroot . missing (directory not created: File exists)
2926:info:destroot ./Applications missing (created)
2927:info:destroot ./Developer missing (created)
2928:info:destroot ./Library missing (created)
2929:info:destroot . changed
2930:info:destroot  gid expected 80 found 0 modified
2931:info:destroot ./bin missing (created)
2932:info:destroot ./etc missing (created)
2933:info:destroot ./include missing (created)
2934:info:destroot ./lib missing (created)
2935:info:destroot ./lib/pkgconfig missing (created)
2936:info:destroot ./libexec missing (created)
2937:info:destroot ./sbin missing (created)
2938:info:destroot ./share missing (created)
2939:info:destroot ./share/info missing (created)
2940:info:destroot ./share/man missing (created)
2941:info:destroot ./share/man/cat1 missing (created)
2942:info:destroot ./share/man/cat2 missing (created)
2943:info:destroot ./share/man/cat3 missing (created)
2944:info:destroot ./share/man/cat4 missing (created)
2945:info:destroot ./share/man/cat5 missing (created)
2946:info:destroot ./share/man/cat6 missing (created)
2947:info:destroot ./share/man/cat7 missing (created)
2948:info:destroot ./share/man/cat8 missing (created)
2949:info:destroot ./share/man/cat9 missing (created)
2950:info:destroot ./share/man/catl missing (created)
2951:info:destroot ./share/man/catn missing (created)
2952:info:destroot ./share/man/man1 missing (created)
2953:info:destroot ./share/man/man2 missing (created)
2954:info:destroot ./share/man/man3 missing (created)
2955:info:destroot ./share/man/man4 missing (created)
2956:info:destroot ./share/man/man5 missing (created)
2957:info:destroot ./share/man/man6 missing (created)
2958:info:destroot ./share/man/man7 missing (created)
2959:info:destroot ./share/man/man8 missing (created)
2960:info:destroot ./share/man/man9 missing (created)
2961:info:destroot ./share/man/manl missing (created)
2962:info:destroot ./share/man/mann missing (created)
2963:info:destroot ./share/nls missing (created)
2964:info:destroot ./share/nls/C missing (created)
2965:info:destroot ./share/nls/af_ZA.ISO8859-1 missing (created)
2966:info:destroot ./share/nls/af_ZA.ISO8859-15 missing (created)
2967:info:destroot ./share/nls/bg_BG.CP1251 missing (created)
2968:info:destroot ./share/nls/cs_CZ.ISO8859-2 missing (created)
2969:info:destroot ./share/nls/da_DK.ISO8859-1 missing (created)
2970:info:destroot ./share/nls/da_DK.ISO8859-15 missing (created)
2971:info:destroot ./share/nls/de_AT.ISO8859-1 missing (created)
2972:info:destroot ./share/nls/de_AT.ISO8859-15 missing (created)
2973:info:destroot ./share/nls/de_CH.ISO8859-1 missing (created)
2974:info:destroot ./share/nls/de_CH.ISO8859-15 missing (created)
2975:info:destroot ./share/nls/de_DE.ISO8859-1 missing (created)
2976:info:destroot ./share/nls/de_DE.ISO8859-15 missing (created)
2977:info:destroot ./share/nls/el_GR.ISO8859-7 missing (created)
2978:info:destroot ./share/nls/en_AU.ISO8859-1 missing (created)
2979:info:destroot ./share/nls/en_AU.ISO8859-15 missing (created)
2980:info:destroot ./share/nls/en_AU.US-ASCII missing (created)
2981:info:destroot ./share/nls/en_CA.ISO8859-1 missing (created)
2982:info:destroot ./share/nls/en_CA.ISO8859-15 missing (created)
2983:info:destroot ./share/nls/en_CA.US-ASCII missing (created)
2984:info:destroot ./share/nls/en_GB.ISO8859-1 missing (created)
2985:info:destroot ./share/nls/en_GB.ISO8859-15 missing (created)
2986:info:destroot ./share/nls/en_GB.US-ASCII missing (created)
2987:info:destroot ./share/nls/en_NZ.ISO8859-1 missing (created)
2988:info:destroot ./share/nls/en_NZ.ISO8859-15 missing (created)
2989:info:destroot ./share/nls/en_NZ.US-ASCII missing (created)
2990:info:destroot ./share/nls/en_US.ISO8859-1 missing (created)
2991:info:destroot ./share/nls/en_US.ISO8859-15 missing (created)
2992:info:destroot ./share/nls/es_ES.ISO8859-1 missing (created)
2993:info:destroot ./share/nls/es_ES.ISO8859-15 missing (created)
2994:info:destroot ./share/nls/et_EE.ISO8859-15 missing (created)
2995:info:destroot ./share/nls/fi_FI.ISO8859-1 missing (created)
2996:info:destroot ./share/nls/fi_FI.ISO8859-15 missing (created)
2997:info:destroot ./share/nls/fr_BE.ISO8859-1 missing (created)
2998:info:destroot ./share/nls/fr_BE.ISO8859-15 missing (created)
2999:info:destroot ./share/nls/fr_CA.ISO8859-1 missing (created)
3000:info:destroot ./share/nls/fr_CA.ISO8859-15 missing (created)
3001:info:destroot ./share/nls/fr_CH.ISO8859-1 missing (created)
3002:info:destroot ./share/nls/fr_CH.ISO8859-15 missing (created)
3003:info:destroot ./share/nls/fr_FR.ISO8859-1 missing (created)
3004:info:destroot ./share/nls/fr_FR.ISO8859-15 missing (created)
3005:info:destroot ./share/nls/hi_IN.ISCII-DEV missing (created)
3006:info:destroot ./share/nls/hr_HR.ISO8859-2 missing (created)
3007:info:destroot ./share/nls/hu_HU.ISO8859-2 missing (created)
3008:info:destroot ./share/nls/is_IS.ISO8859-1 missing (created)
3009:info:destroot ./share/nls/is_IS.ISO8859-15 missing (created)
3010:info:destroot ./share/nls/it_CH.ISO8859-1 missing (created)
3011:info:destroot ./share/nls/it_CH.ISO8859-15 missing (created)
3012:info:destroot ./share/nls/it_IT.ISO8859-1 missing (created)
3013:info:destroot ./share/nls/it_IT.ISO8859-15 missing (created)
3014:info:destroot ./share/nls/ja_JP.SJIS missing (created)
3015:info:destroot ./share/nls/ja_JP.eucJP missing (created)
3016:info:destroot ./share/nls/ko_KR.eucKR missing (created)
3017:info:destroot ./share/nls/la_LN.ISO8859-1 missing (created)
3018:info:destroot ./share/nls/la_LN.ISO8859-15 missing (created)
3019:info:destroot ./share/nls/la_LN.ISO8859-2 missing (created)
3020:info:destroot ./share/nls/la_LN.ISO8859-4 missing (created)
3021:info:destroot ./share/nls/la_LN.US-ASCII missing (created)
3022:info:destroot ./share/nls/lt_LT.ISO8859-4 missing (created)
3023:info:destroot ./share/nls/nl_BE.ISO8859-1 missing (created)
3024:info:destroot ./share/nls/nl_BE.ISO8859-15 missing (created)
3025:info:destroot ./share/nls/nl_NL.ISO8859-1 missing (created)
3026:info:destroot ./share/nls/nl_NL.ISO8859-15 missing (created)
3027:info:destroot ./share/nls/no_NO.ISO8859-1 missing (created)
3028:info:destroot ./share/nls/no_NO.ISO8859-15 missing (created)
3029:info:destroot ./share/nls/pl_PL.ISO8859-2 missing (created)
3030:info:destroot ./share/nls/pt_BR.ISO8859-1 missing (created)
3031:info:destroot ./share/nls/pt_PT.ISO8859-1 missing (created)
3032:info:destroot ./share/nls/pt_PT.ISO8859-15 missing (created)
3033:info:destroot ./share/nls/ro_RO.ISO8859-2 missing (created)
3034:info:destroot ./share/nls/ru_RU.CP866 missing (created)
3035:info:destroot ./share/nls/ru_RU.ISO8859-5 missing (created)
3036:info:destroot ./share/nls/ru_RU.KOI8-R missing (created)
3037:info:destroot ./share/nls/sk_SK.ISO8859-2 missing (created)
3038:info:destroot ./share/nls/sl_SI.ISO8859-2 missing (created)
3039:info:destroot ./share/nls/sv_SE.ISO8859-1 missing (created)
3040:info:destroot ./share/nls/sv_SE.ISO8859-15 missing (created)
3041:info:destroot ./share/nls/tr_TR.ISO8859-9 missing (created)
3042:info:destroot ./share/nls/uk_UA.ISO8859-5 missing (created)
3043:info:destroot ./share/nls/uk_UA.KOI8-U missing (created)
3044:info:destroot ./share/nls/zh_CN.eucCN missing (created)
3045:info:destroot ./share/nls/zh_TW.Big5 missing (created)
3046:info:destroot ./share/skel missing (created)
3047:info:destroot ./src missing (created)
3048:info:destroot ./var missing (created)
3049:info:destroot ./www missing (created)
3050:debug:destroot Executing proc-pre-org.macports.destroot-destroot-0
3051:info:destroot xinstall: mkdir /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/share/doc
3052:info:destroot xinstall: mkdir /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/share/doc/pymol
3053:info:destroot xinstall: mkdir /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/share/doc/pymol/examples
3054:debug:destroot Executing proc-pre-org.macports.destroot-destroot-1
3055:debug:destroot Executing org.macports.destroot (pymol)
3056:debug:destroot Environment:
3057CC='/usr/bin/clang'
3058CC_PRINT_OPTIONS='YES'
3059CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/.CC_PRINT_OPTIONS'
3060CPATH='/opt/local/include'
3061CXX='/usr/bin/clang++'
3062LIBRARY_PATH='/opt/local/lib'
3063MACOSX_DEPLOYMENT_TARGET='10.10'
3064:debug:destroot Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol" && /opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7 setup.py --no-user-cfg install --prefix=/opt/local/Library/Frameworks/Python.framework/Versions/2.7 --root=/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot'
3065:debug:destroot Executing command line:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol" && /opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7 setup.py --no-user-cfg install --prefix=/opt/local/Library/Frameworks/Python.framework/Versions/2.7 --root=/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot
3066:info:destroot fatal: Not a git repository (or any of the parent directories): .git
3067:info:destroot svn: E155007: '/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol' is not a working copy
3068:info:destroot running install
3069:info:destroot running build
3070:info:destroot running build_py
3071:info:destroot creating build/lib.macosx-10.10-x86_64-2.7
3072:info:destroot creating build/lib.macosx-10.10-x86_64-2.7/pymol
3073:info:destroot creating build/lib.macosx-10.10-x86_64-2.7/pymol/embed
3074:info:destroot creating build/lib.macosx-10.10-x86_64-2.7/pymol/embed/epymol
3075:info:destroot copying modules/pymol/embed/epymol/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/embed/epymol
3076:info:destroot creating build/lib.macosx-10.10-x86_64-2.7/chempy
3077:info:destroot creating build/lib.macosx-10.10-x86_64-2.7/chempy/tinker
3078:info:destroot copying modules/chempy/tinker/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/chempy/tinker
3079:info:destroot copying modules/chempy/tinker/amber.py -> build/lib.macosx-10.10-x86_64-2.7/chempy/tinker
3080:info:destroot copying modules/chempy/tinker/keyword.py -> build/lib.macosx-10.10-x86_64-2.7/chempy/tinker
3081:info:destroot copying modules/chempy/tinker/realtime.py -> build/lib.macosx-10.10-x86_64-2.7/chempy/tinker
3082:info:destroot copying modules/chempy/tinker/state.py -> build/lib.macosx-10.10-x86_64-2.7/chempy/tinker
3083:info:destroot creating build/lib.macosx-10.10-x86_64-2.7/pmg_tk
3084:info:destroot creating build/lib.macosx-10.10-x86_64-2.7/pmg_tk/skins
3085:info:destroot creating build/lib.macosx-10.10-x86_64-2.7/pmg_tk/skins/demo
3086:info:destroot copying modules/pmg_tk/skins/demo/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/pmg_tk/skins/demo
3087:info:destroot creating build/lib.macosx-10.10-x86_64-2.7/pmg_tk/startup
3088:info:destroot copying modules/pmg_tk/startup/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/pmg_tk/startup
3089:info:destroot copying modules/pmg_tk/startup/apbs_tools.py -> build/lib.macosx-10.10-x86_64-2.7/pmg_tk/startup
3090:info:destroot copying modules/pmg_tk/startup/remote_pdb_load.py -> build/lib.macosx-10.10-x86_64-2.7/pmg_tk/startup
3091:info:destroot creating build/lib.macosx-10.10-x86_64-2.7/pymol/opengl
3092:info:destroot creating build/lib.macosx-10.10-x86_64-2.7/pymol/opengl/glu
3093:info:destroot copying modules/pymol/opengl/glu/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/opengl/glu
3094:info:destroot creating build/lib.macosx-10.10-x86_64-2.7/pmg_wx
3095:info:destroot copying modules/pmg_wx/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/pmg_wx
3096:info:destroot creating build/lib.macosx-10.10-x86_64-2.7/chempy/fast
3097:info:destroot copying modules/chempy/fast/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/chempy/fast
3098:info:destroot creating build/lib.macosx-10.10-x86_64-2.7/chempy/fragments
3099:info:destroot copying modules/chempy/fragments/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/chempy/fragments
3100:info:destroot copying modules/pmg_tk/skins/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/pmg_tk/skins
3101:info:destroot creating build/lib.macosx-10.10-x86_64-2.7/web
3102:info:destroot copying modules/web/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/web
3103:info:destroot copying modules/web/pymolhttpd.py -> build/lib.macosx-10.10-x86_64-2.7/web
3104:info:destroot copying modules/pymol/embed/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/embed
3105:info:destroot creating build/lib.macosx-10.10-x86_64-2.7/pymol/contrib
3106:info:destroot copying modules/pymol/contrib/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/contrib
3107:info:destroot creating build/lib.macosx-10.10-x86_64-2.7/pymol/opengl/glut
3108:info:destroot copying modules/pymol/opengl/glut/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/opengl/glut
3109:info:destroot creating build/lib.macosx-10.10-x86_64-2.7/pymol2
3110:info:destroot copying modules/pymol2/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/pymol2
3111:info:destroot copying modules/pymol2/cmd2.py -> build/lib.macosx-10.10-x86_64-2.7/pymol2
3112:info:destroot copying modules/pymol2/make_cmd2.py -> build/lib.macosx-10.10-x86_64-2.7/pymol2
3113:info:destroot creating build/lib.macosx-10.10-x86_64-2.7/web/examples
3114:info:destroot copying modules/web/examples/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/web/examples
3115:info:destroot copying modules/web/examples/justhttpd.py -> build/lib.macosx-10.10-x86_64-2.7/web/examples
3116:info:destroot copying modules/pmg_tk/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/pmg_tk
3117:info:destroot copying modules/pmg_tk/ColorEditor.py -> build/lib.macosx-10.10-x86_64-2.7/pmg_tk
3118:info:destroot copying modules/pmg_tk/Demo.py -> build/lib.macosx-10.10-x86_64-2.7/pmg_tk
3119:info:destroot copying modules/pmg_tk/PMGApp.py -> build/lib.macosx-10.10-x86_64-2.7/pmg_tk
3120:info:destroot copying modules/pmg_tk/PyMOLMapLoad.py -> build/lib.macosx-10.10-x86_64-2.7/pmg_tk
3121:info:destroot copying modules/pmg_tk/SetEditor.py -> build/lib.macosx-10.10-x86_64-2.7/pmg_tk
3122:info:destroot copying modules/pmg_tk/Setting.py -> build/lib.macosx-10.10-x86_64-2.7/pmg_tk
3123:info:destroot copying modules/pmg_tk/TextEditor.py -> build/lib.macosx-10.10-x86_64-2.7/pmg_tk
3124:info:destroot copying modules/pmg_tk/volume.py -> build/lib.macosx-10.10-x86_64-2.7/pmg_tk
3125:info:destroot creating build/lib.macosx-10.10-x86_64-2.7/pmg_tk/skins/normal
3126:info:destroot copying modules/pmg_tk/skins/normal/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/pmg_tk/skins/normal
3127:info:destroot copying modules/pmg_tk/skins/normal/builder.py -> build/lib.macosx-10.10-x86_64-2.7/pmg_tk/skins/normal
3128:info:destroot copying modules/pmg_tk/skins/normal/ModalWindow.py -> build/lib.macosx-10.10-x86_64-2.7/pmg_tk/skins/normal
3129:info:destroot creating build/lib.macosx-10.10-x86_64-2.7/chempy/champ
3130:info:destroot copying modules/chempy/champ/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/chempy/champ
3131:info:destroot copying modules/chempy/champ/amber99.py -> build/lib.macosx-10.10-x86_64-2.7/chempy/champ
3132:info:destroot copying modules/chempy/champ/assign.py -> build/lib.macosx-10.10-x86_64-2.7/chempy/champ
3133:info:destroot copying modules/chempy/champ/formal_charges.py -> build/lib.macosx-10.10-x86_64-2.7/chempy/champ
3134:info:destroot creating build/lib.macosx-10.10-x86_64-2.7/pymol/embed/wxpymol
3135:info:destroot copying modules/pymol/embed/wxpymol/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/embed/wxpymol
3136:info:destroot creating build/lib.macosx-10.10-x86_64-2.7/pymol/wizard
3137:info:destroot copying modules/pymol/wizard/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard
3138:info:destroot copying modules/pymol/wizard/annotation.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard
3139:info:destroot copying modules/pymol/wizard/appearance.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard
3140:info:destroot copying modules/pymol/wizard/benchmark.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard
3141:info:destroot copying modules/pymol/wizard/box.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard
3142:info:destroot copying modules/pymol/wizard/charge.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard
3143:info:destroot copying modules/pymol/wizard/cleanup.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard
3144:info:destroot copying modules/pymol/wizard/demo.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard
3145:info:destroot copying modules/pymol/wizard/density.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard
3146:info:destroot copying modules/pymol/wizard/distance.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard
3147:info:destroot copying modules/pymol/wizard/dragging.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard
3148:info:destroot copying modules/pymol/wizard/fedora.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard
3149:info:destroot copying modules/pymol/wizard/filter.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard
3150:info:destroot copying modules/pymol/wizard/label.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard
3151:info:destroot copying modules/pymol/wizard/measurement.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard
3152:info:destroot copying modules/pymol/wizard/message.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard
3153:info:destroot copying modules/pymol/wizard/mutagenesis.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard
3154:info:destroot copying modules/pymol/wizard/pair_fit.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard
3155:info:destroot copying modules/pymol/wizard/pseudoatom.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard
3156:info:destroot copying modules/pymol/wizard/renaming.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard
3157:info:destroot copying modules/pymol/wizard/sculpting.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard
3158:info:destroot copying modules/pymol/wizard/security.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard
3159:info:destroot copying modules/pymol/wizard/stereodemo.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard
3160:info:destroot copying modules/pymol/wizard/toggle.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard
3161:info:destroot creating build/lib.macosx-10.10-x86_64-2.7/pymol/opengl/gl
3162:info:destroot copying modules/pymol/opengl/gl/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/opengl/gl
3163:info:destroot copying modules/pymol/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3164:info:destroot copying modules/pymol/api.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3165:info:destroot copying modules/pymol/callback.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3166:info:destroot copying modules/pymol/cgo.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3167:info:destroot copying modules/pymol/checking.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3168:info:destroot copying modules/pymol/cmd.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3169:info:destroot copying modules/pymol/colorramping.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3170:info:destroot copying modules/pymol/commanding.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3171:info:destroot copying modules/pymol/completing.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3172:info:destroot copying modules/pymol/computing.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3173:info:destroot copying modules/pymol/constants.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3174:info:destroot copying modules/pymol/constants_palette.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3175:info:destroot copying modules/pymol/controlling.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3176:info:destroot copying modules/pymol/creating.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3177:info:destroot copying modules/pymol/editing.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3178:info:destroot copying modules/pymol/editor.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3179:info:destroot copying modules/pymol/experimenting.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3180:info:destroot copying modules/pymol/exporting.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3181:info:destroot copying modules/pymol/externing.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3182:info:destroot copying modules/pymol/feedingback.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3183:info:destroot copying modules/pymol/fitting.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3184:info:destroot copying modules/pymol/gui.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3185:info:destroot copying modules/pymol/headering.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3186:info:destroot copying modules/pymol/helping.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3187:info:destroot copying modules/pymol/importing.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3188:info:destroot copying modules/pymol/internal.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3189:info:destroot copying modules/pymol/invocation.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3190:info:destroot copying modules/pymol/keyboard.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3191:info:destroot copying modules/pymol/keywords.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3192:info:destroot copying modules/pymol/locking.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3193:info:destroot copying modules/pymol/m4x.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3194:info:destroot copying modules/pymol/menu.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3195:info:destroot copying modules/pymol/monitoring.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3196:info:destroot copying modules/pymol/movie.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3197:info:destroot copying modules/pymol/moving.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3198:info:destroot copying modules/pymol/parser.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3199:info:destroot copying modules/pymol/parsing.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3200:info:destroot copying modules/pymol/povray.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3201:info:destroot copying modules/pymol/preset.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3202:info:destroot copying modules/pymol/querying.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3203:info:destroot copying modules/pymol/rpc.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3204:info:destroot copying modules/pymol/selecting.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3205:info:destroot copying modules/pymol/selector.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3206:info:destroot copying modules/pymol/setting.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3207:info:destroot copying modules/pymol/shortcut.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3208:info:destroot copying modules/pymol/util.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3209:info:destroot copying modules/pymol/vfont.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3210:info:destroot copying modules/pymol/viewing.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3211:info:destroot copying modules/pymol/wizarding.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3212:info:destroot copying modules/pymol/xray.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3213:info:destroot copying modules/pymol/xwin.py -> build/lib.macosx-10.10-x86_64-2.7/pymol
3214:info:destroot creating build/lib.macosx-10.10-x86_64-2.7/chempy/bmin
3215:info:destroot copying modules/chempy/bmin/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/chempy/bmin
3216:info:destroot copying modules/chempy/bmin/commands.py -> build/lib.macosx-10.10-x86_64-2.7/chempy/bmin
3217:info:destroot copying modules/chempy/bmin/realtime.py -> build/lib.macosx-10.10-x86_64-2.7/chempy/bmin
3218:info:destroot copying modules/chempy/bmin/state.py -> build/lib.macosx-10.10-x86_64-2.7/chempy/bmin
3219:info:destroot copying modules/chempy/bmin/util.py -> build/lib.macosx-10.10-x86_64-2.7/chempy/bmin
3220:info:destroot copying modules/chempy/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/chempy
3221:info:destroot copying modules/chempy/arc.py -> build/lib.macosx-10.10-x86_64-2.7/chempy
3222:info:destroot copying modules/chempy/bond_amber.py -> build/lib.macosx-10.10-x86_64-2.7/chempy
3223:info:destroot copying modules/chempy/bond_mmff.py -> build/lib.macosx-10.10-x86_64-2.7/chempy
3224:info:destroot copying modules/chempy/bonds.py -> build/lib.macosx-10.10-x86_64-2.7/chempy
3225:info:destroot copying modules/chempy/brick.py -> build/lib.macosx-10.10-x86_64-2.7/chempy
3226:info:destroot copying modules/chempy/cc1.py -> build/lib.macosx-10.10-x86_64-2.7/chempy
3227:info:destroot copying modules/chempy/cex.py -> build/lib.macosx-10.10-x86_64-2.7/chempy
3228:info:destroot copying modules/chempy/charge.py -> build/lib.macosx-10.10-x86_64-2.7/chempy
3229:info:destroot copying modules/chempy/cif.py -> build/lib.macosx-10.10-x86_64-2.7/chempy
3230:info:destroot copying modules/chempy/cpv.py -> build/lib.macosx-10.10-x86_64-2.7/chempy
3231:info:destroot copying modules/chempy/dictdb.py -> build/lib.macosx-10.10-x86_64-2.7/chempy
3232:info:destroot copying modules/chempy/gamess1.py -> build/lib.macosx-10.10-x86_64-2.7/chempy
3233:info:destroot copying modules/chempy/gms.py -> build/lib.macosx-10.10-x86_64-2.7/chempy
3234:info:destroot copying modules/chempy/hetatm.py -> build/lib.macosx-10.10-x86_64-2.7/chempy
3235:info:destroot copying modules/chempy/io.py -> build/lib.macosx-10.10-x86_64-2.7/chempy
3236:info:destroot copying modules/chempy/lst.py -> build/lib.macosx-10.10-x86_64-2.7/chempy
3237:info:destroot copying modules/chempy/mae.py -> build/lib.macosx-10.10-x86_64-2.7/chempy
3238:info:destroot copying modules/chempy/map.py -> build/lib.macosx-10.10-x86_64-2.7/chempy
3239:info:destroot copying modules/chempy/mass.py -> build/lib.macosx-10.10-x86_64-2.7/chempy
3240:info:destroot copying modules/chempy/mmd.py -> build/lib.macosx-10.10-x86_64-2.7/chempy
3241:info:destroot copying modules/chempy/models.py -> build/lib.macosx-10.10-x86_64-2.7/chempy
3242:info:destroot copying modules/chempy/mol.py -> build/lib.macosx-10.10-x86_64-2.7/chempy
3243:info:destroot copying modules/chempy/mol2.py -> build/lib.macosx-10.10-x86_64-2.7/chempy
3244:info:destroot copying modules/chempy/neighbor.py -> build/lib.macosx-10.10-x86_64-2.7/chempy
3245:info:destroot copying modules/chempy/pdb.py -> build/lib.macosx-10.10-x86_64-2.7/chempy
3246:info:destroot copying modules/chempy/pkl.py -> build/lib.macosx-10.10-x86_64-2.7/chempy
3247:info:destroot copying modules/chempy/place.py -> build/lib.macosx-10.10-x86_64-2.7/chempy
3248:info:destroot copying modules/chempy/protein.py -> build/lib.macosx-10.10-x86_64-2.7/chempy
3249:info:destroot copying modules/chempy/protein_amber.py -> build/lib.macosx-10.10-x86_64-2.7/chempy
3250:info:destroot copying modules/chempy/protein_amber99.py -> build/lib.macosx-10.10-x86_64-2.7/chempy
3251:info:destroot copying modules/chempy/protein_mmff.py -> build/lib.macosx-10.10-x86_64-2.7/chempy
3252:info:destroot copying modules/chempy/protein_residues.py -> build/lib.macosx-10.10-x86_64-2.7/chempy
3253:info:destroot copying modules/chempy/sdf.py -> build/lib.macosx-10.10-x86_64-2.7/chempy
3254:info:destroot copying modules/chempy/solvate.py -> build/lib.macosx-10.10-x86_64-2.7/chempy
3255:info:destroot copying modules/chempy/water_amber.py -> build/lib.macosx-10.10-x86_64-2.7/chempy
3256:info:destroot copying modules/chempy/water_residues.py -> build/lib.macosx-10.10-x86_64-2.7/chempy
3257:info:destroot copying modules/chempy/xyz.py -> build/lib.macosx-10.10-x86_64-2.7/chempy
3258:info:destroot creating build/lib.macosx-10.10-x86_64-2.7/pymol/plugins
3259:info:destroot copying modules/pymol/plugins/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/plugins
3260:info:destroot copying modules/pymol/plugins/installation.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/plugins
3261:info:destroot copying modules/pymol/plugins/legacysupport.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/plugins
3262:info:destroot copying modules/pymol/plugins/managergui.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/plugins
3263:info:destroot copying modules/pymol/plugins/repository.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/plugins
3264:info:destroot copying modules/pymol/opengl/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/opengl
3265:info:destroot running build_ext
3266:info:destroot building 'pymol._cmd' extension
3267:info:destroot creating build/temp.macosx-10.10-x86_64-2.7
3268:info:destroot creating build/temp.macosx-10.10-x86_64-2.7/ov
3269:info:destroot creating build/temp.macosx-10.10-x86_64-2.7/ov/src
3270:info:destroot creating build/temp.macosx-10.10-x86_64-2.7/layer0
3271:info:destroot creating build/temp.macosx-10.10-x86_64-2.7/layer1
3272:info:destroot creating build/temp.macosx-10.10-x86_64-2.7/layer2
3273:info:destroot creating build/temp.macosx-10.10-x86_64-2.7/layer3
3274:info:destroot creating build/temp.macosx-10.10-x86_64-2.7/layer4
3275:info:destroot creating build/temp.macosx-10.10-x86_64-2.7/layer5
3276:info:destroot creating build/temp.macosx-10.10-x86_64-2.7/modules
3277:info:destroot creating build/temp.macosx-10.10-x86_64-2.7/modules/cealign
3278:info:destroot creating build/temp.macosx-10.10-x86_64-2.7/modules/cealign/src
3279:info:destroot creating build/temp.macosx-10.10-x86_64-2.7/build
3280:info:destroot creating build/temp.macosx-10.10-x86_64-2.7/build/generated
3281:info:destroot creating build/temp.macosx-10.10-x86_64-2.7/contrib
3282:info:destroot creating build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc
3283:info:destroot creating build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins
3284:info:destroot creating build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin
3285:info:destroot creating build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src
3286:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c ov/src/ov_utility.c -o build/temp.macosx-10.10-x86_64-2.7/ov/src/ov_utility.o -ffast-math -funroll-loops -O3 -g -fcommon
3287:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Err.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Err.o -ffast-math -funroll-loops -O3 -g -fcommon
3288:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Pixmap.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Pixmap.o -ffast-math -funroll-loops -O3 -g -fcommon
3289:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/Basis.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/Basis.o -ffast-math -funroll-loops -O3 -g -fcommon
3290:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/ButMode.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/ButMode.o -ffast-math -funroll-loops -O3 -g -fcommon
3291:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c ov/src/OVContext.c -o build/temp.macosx-10.10-x86_64-2.7/ov/src/OVContext.o -ffast-math -funroll-loops -O3 -g -fcommon
3292:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Feedback.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Feedback.o -ffast-math -funroll-loops -O3 -g -fcommon
3293:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Queue.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Queue.o -ffast-math -funroll-loops -O3 -g -fcommon
3294:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Field.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Field.o -ffast-math -funroll-loops -O3 -g -fcommon
3295:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c ov/src/OVHeap.c -o build/temp.macosx-10.10-x86_64-2.7/ov/src/OVHeap.o -ffast-math -funroll-loops -O3 -g -fcommon
3296:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c ov/src/OVHeapArray.c -o build/temp.macosx-10.10-x86_64-2.7/ov/src/OVHeapArray.o -ffast-math -funroll-loops -O3 -g -fcommon
3297:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Raw.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Raw.o -ffast-math -funroll-loops -O3 -g -fcommon
3298:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c ov/src/OVLexicon.c -o build/temp.macosx-10.10-x86_64-2.7/ov/src/OVLexicon.o -ffast-math -funroll-loops -O3 -g -fcommon
3299:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/CGO.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/CGO.o -ffast-math -funroll-loops -O3 -g -fcommon
3300:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/ShaderMgr.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/ShaderMgr.o -ffast-math -funroll-loops -O3 -g -fcommon
3301:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Isosurf.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Isosurf.o -ffast-math -funroll-loops -O3 -g -fcommon
3302:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c ov/src/OVOneToAny.c -o build/temp.macosx-10.10-x86_64-2.7/ov/src/OVOneToAny.o -ffast-math -funroll-loops -O3 -g -fcommon
3303:info:destroot layer0/Isosurf.c:2211:1:layer0/ShaderMgr.c: warning: 521:11: warning: control reaches end of non-void function [-Wreturn-type]using the result of an assignment as a condition without parentheses [-Wparentheses]
3304:info:destroot
3305:info:destroot layer1/CGO.c:1881:6: warning: unused variable 'ncolors' [-Wunused-variable]
3306:info:destroot }
3307:info:destroot ^
3308:info:destroot         int ncolors = 0;
3309:info:destroot             ^
3310:info:destroot   if (err = glGetError()){
3311:info:destroot       ~~~~^~~~~~~~~~~~~~
3312:info:destroot layer0/ShaderMgr.c:521:11: note: place parentheses around the assignment to silence this warning
3313:info:destroot   if (err = glGetError()){
3314:info:destroot           ^
3315:info:destroot       (                 )
3316:info:destroot layer0/ShaderMgr.c:521:11: note: use '==' to turn this assignment into an equality comparison
3317:info:destroot   if (err = glGetError()){
3318:info:destroot           ^
3319:info:destroot           ==
3320:info:destroot layer0/ShaderMgr.c:528:13: warning: using the result of an assignment as a condition without parentheses [-Wparentheses]
3321:info:destroot     if (err = glGetError()){
3322:info:destroot         ~~~~^~~~~~~~~~~~~~
3323:info:destroot layer0/ShaderMgr.c:528:13: note: place parentheses around the assignment to silence this warning
3324:info:destroot     if (err = glGetError()){
3325:info:destroot             ^
3326:info:destroot         (                 )
3327:info:destroot layer0/ShaderMgr.c:528:13: note: use '==' to turn this assignment into an equality comparison
3328:info:destroot     if (err = glGetError()){
3329:info:destroot             ^
3330:info:destroot             ==
3331:info:destroot layer0/ShaderMgr.c:827:14: warning: unused variable 'err' [-Wunused-variable]
3332:info:destroot       GLenum err ;
3333:info:destroot              ^
3334:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c ov/src/OVOneToOne.c -o build/temp.macosx-10.10-x86_64-2.7/ov/src/OVOneToOne.o -ffast-math -funroll-loops -O3 -g -fcommon
3335:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c ov/src/OVRandom.c -o build/temp.macosx-10.10-x86_64-2.7/ov/src/OVRandom.o -ffast-math -funroll-loops -O3 -g -fcommon
3336:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Block.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Block.o -ffast-math -funroll-loops -O3 -g -fcommon
3337:info:destroot 3 warnings generated.
3338:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Sphere.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Sphere.o -ffast-math -funroll-loops -O3 -g -fcommon
3339:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Crystal.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Crystal.o -ffast-math -funroll-loops -O3 -g -fcommon
3340:info:destroot layer0/Sphere.c:34:20: warning: unused variable 'start_points' [-Wunused-const-variable]
3341:info:destroot static const float start_points[13][3] = {
3342:info:destroot                    ^
3343:info:destroot layer0/Sphere.c:49:18: warning: unused variable 'icosahedron' [-Wunused-const-variable]
3344:info:destroot static const int icosahedron[21][3] = {
3345:info:destroot                  ^
3346:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Debug.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Debug.o -ffast-math -funroll-loops -O3 -g -fcommon
3347:info:destroot 2 warnings generated.
3348:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Deferred.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Deferred.o -ffast-math -funroll-loops -O3 -g -fcommon
3349:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Tetsurf.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Tetsurf.o -ffast-math -funroll-loops -O3 -g -fcommon
3350:info:destroot 1 warning generated.
3351:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Map.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Map.o -ffast-math -funroll-loops -O3 -g -fcommon
3352:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/FontGLUTHel12.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/FontGLUTHel12.o -ffast-math -funroll-loops -O3 -g -fcommon
3353:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/FontGLUTHel18.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/FontGLUTHel18.o -ffast-math -funroll-loops -O3 -g -fcommon
3354:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/FontType.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/FontType.o -ffast-math -funroll-loops -O3 -g -fcommon
3355:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Match.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Match.o -ffast-math -funroll-loops -O3 -g -fcommon
3356:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/Movie.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/Movie.o -ffast-math -funroll-loops -O3 -g -fcommon
3357:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Matrix.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Matrix.o -ffast-math -funroll-loops -O3 -g -fcommon
3358:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Texture.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Texture.o -ffast-math -funroll-loops -O3 -g -fcommon
3359:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Tracker.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Tracker.o -ffast-math -funroll-loops -O3 -g -fcommon
3360:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/Ortho.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/Ortho.o -ffast-math -funroll-loops -O3 -g -fcommon
3361:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Triangle.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Triangle.o -ffast-math -funroll-loops -O3 -g -fcommon
3362:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/P.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/P.o -ffast-math -funroll-loops -O3 -g -fcommon
3363:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/MemoryCache.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/MemoryCache.o -ffast-math -funroll-loops -O3 -g -fcommon
3364:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/MemoryDebug.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/MemoryDebug.o -ffast-math -funroll-loops -O3 -g -fcommon
3365:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/MyPNG.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/MyPNG.o -ffast-math -funroll-loops -O3 -g -fcommon
3366:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/os_gl.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/os_gl.o -ffast-math -funroll-loops -O3 -g -fcommon
3367:info:destroot layer0/os_gl.c:99:59: warning: 'gluErrorString' is deprecated: first deprecated in OS X 10.9 [-Wdeprecated-declarations]
3368:info:destroot     printf("OpenGL-Error: Where? %s: %s\n", pos, (char *) gluErrorString(glerr));
3369:info:destroot                                                           ^
3370:info:destroot /System/Library/Frameworks/OpenGL.framework/Headers/glu.h:260:24: note: 'gluErrorString' has been explicitly marked deprecated here
3371:info:destroot extern const GLubyte * gluErrorString (GLenum error) OPENGL_DEPRECATED(10_0, 10_9);
3372:info:destroot                        ^
3373:info:destroot 1 warning generated.
3374:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Parse.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Parse.o -ffast-math -funroll-loops -O3 -g -fcommon
3375:info:destroot layer0/Parse.c:173:10: warning: array subscript is of type 'char' [-Wchar-subscripts]
3376:info:destroot       buf[blen] = 0;
3377:info:destroot          ^~~~~
3378:info:destroot 1 warning generated.
3379:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/ScrollBar.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/ScrollBar.o -ffast-math -funroll-loops -O3 -g -fcommon
3380:info:destroot 1 warning generated.
3381:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/Character.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/Character.o -ffast-math -funroll-loops -O3 -g -fcommon
3382:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Util.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Util.o -ffast-math -funroll-loops -O3 -g -fcommon
3383:info:destroot layer1/Character.c:267:18: warning: unused variable 'vertexVals' [-Wunused-variable]
3384:info:destroot           const GLfloat vertexVals [] = {
3385:info:destroot                         ^
3386:info:destroot layer1/Character.c:273:18: warning: unused variable 'texVals' [-Wunused-variable]
3387:info:destroot           const GLfloat texVals [] = {
3388:info:destroot                         ^
3389:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/PConv.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/PConv.o -ffast-math -funroll-loops -O3 -g -fcommon
3390:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/Seq.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/Seq.o -ffast-math -funroll-loops -O3 -g -fcommon
3391:info:destroot 2 warnings generated.
3392:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Vector.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Vector.o -ffast-math -funroll-loops -O3 -g -fcommon
3393:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/Color.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/Color.o -ffast-math -funroll-loops -O3 -g -fcommon
3394:info:destroot layer1/Color.c:3069:16: warning: unused variable 'result' [-Wunused-variable]
3395:info:destroot   unsigned int result;
3396:info:destroot                ^
3397:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/Pop.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/Pop.o -ffast-math -funroll-loops -O3 -g -fcommon
3398:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/Setting.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/Setting.o -ffast-math -funroll-loops -O3 -g -fcommon
3399:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Word.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Word.o -ffast-math -funroll-loops -O3 -g -fcommon
3400:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/PyMOLObject.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/PyMOLObject.o -ffast-math -funroll-loops -O3 -g -fcommon
3401:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/GadgetSet.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/GadgetSet.o -ffast-math -funroll-loops -O3 -g -fcommon
3402:info:destroot 1 warning generated.
3403:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/Control.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/Control.o -ffast-math -funroll-loops -O3 -g -fcommon
3404:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/Ray.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/Ray.o -ffast-math -funroll-loops -O3 -g -fcommon
3405:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/ObjectAlignment.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectAlignment.o -ffast-math -funroll-loops -O3 -g -fcommon
3406:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/Extrude.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/Extrude.o -ffast-math -funroll-loops -O3 -g -fcommon
3407:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/Shaker.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/Shaker.o -ffast-math -funroll-loops -O3 -g -fcommon
3408:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/ObjectCallback.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectCallback.o -ffast-math -funroll-loops -O3 -g -fcommon
3409:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/ObjectCGO.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectCGO.o -ffast-math -funroll-loops -O3 -g -fcommon
3410:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/Symmetry.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/Symmetry.o -ffast-math -funroll-loops -O3 -g -fcommon
3411:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/Font.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/Font.o -ffast-math -funroll-loops -O3 -g -fcommon
3412:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/FontGLUT.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/FontGLUT.o -ffast-math -funroll-loops -O3 -g -fcommon
3413:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/Text.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/Text.o -ffast-math -funroll-loops -O3 -g -fcommon
3414:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/FontGLUT8x13.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/FontGLUT8x13.o -ffast-math -funroll-loops -O3 -g -fcommon
3415:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/ObjectDist.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectDist.o -ffast-math -funroll-loops -O3 -g -fcommon
3416:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/FontGLUT9x15.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/FontGLUT9x15.o -ffast-math -funroll-loops -O3 -g -fcommon
3417:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/FontGLUTHel10.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/FontGLUTHel10.o -ffast-math -funroll-loops -O3 -g -fcommon
3418:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/ObjectSlice.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectSlice.o -ffast-math -funroll-loops -O3 -g -fcommon
3419:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/ObjectGadget.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectGadget.o -ffast-math -funroll-loops -O3 -g -fcommon
3420:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/ObjectGadgetRamp.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectGadgetRamp.o -ffast-math -funroll-loops -O3 -g -fcommon
3421:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/ObjectSurface.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectSurface.o -ffast-math -funroll-loops -O3 -g -fcommon
3422:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/ObjectGroup.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectGroup.o -ffast-math -funroll-loops -O3 -g -fcommon
3423:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/ObjectVolume.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectVolume.o -ffast-math -funroll-loops -O3 -g -fcommon
3424:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/ObjectMap.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectMap.o -ffast-math -funroll-loops -O3 -g -fcommon
3425:info:destroot layer2/ObjectVolume.c:73:19: warning: unused variable 'oms' [-Wunused-variable]
3426:info:destroot   ObjectMapState *oms = NULL;
3427:info:destroot                   ^
3428:info:destroot layer2/ObjectVolume.c:471:9: warning: '&&' within '||' [-Wlogical-op-parentheses]
3429:info:destroot         && vs->Ramp[5 * (vs->RampSize - 1)] == 359.f) {
3430:info:destroot         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
3431:info:destroot layer2/ObjectVolume.c:471:9: note: place parentheses around the '&&' expression to silence this warning
3432:info:destroot         && vs->Ramp[5 * (vs->RampSize - 1)] == 359.f) {
3433:info:destroot         ^
3434:info:destroot layer2/ObjectVolume.c:452:51: warning: expression result unused [-Wunused-value]
3435:info:destroot       a, vs->RefreshFlag, vs->ResurfaceFlag ENDFD(G);
3436:info:destroot                                                   ^
3437:info:destroot layer2/ObjectVolume.c:435:14: warning: unused variable 'map' [-Wunused-variable]
3438:info:destroot   ObjectMap *map = NULL;
3439:info:destroot              ^
3440:info:destroot layer2/ObjectVolume.c:695:10: warning: unused variable 'j' [-Wunused-variable]
3441:info:destroot   int i, j, ci[] = {
3442:info:destroot          ^
3443:info:destroot layer2/ObjectVolume.c:891:89: warning: '&&' within '||' [-Wlogical-op-parentheses]
3444:info:destroot         CShaderPrg_Set1f(shaderPrg, "fogIsSolidColor", bg_gradient || bg_image_filename && bg_image_filename[0] ? 0.f : 1.f);
3445:info:destroot                                                                    ~~ ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
3446:info:destroot layer2/ObjectVolume.c:891:89: note: place parentheses around the '&&' expression to silence this warning
3447:info:destroot         CShaderPrg_Set1f(shaderPrg, "fogIsSolidColor", bg_gradient || bg_image_filename && bg_image_filename[0] ? 0.f : 1.f);
3448:info:destroot                                                                                         ^
3449:info:destroot                                                                       (                                        )
3450:info:destroot layer2/ObjectVolume.c:726:8: warning: unused variable 'n' [-Wunused-variable]
3451:info:destroot   int *n = NULL;
3452:info:destroot        ^
3453:info:destroot layer2/ObjectVolume.c:1330:9: warning: unused variable 'min_val' [-Wunused-variable]
3454:info:destroot   float min_val, max_val;
3455:info:destroot         ^
3456:info:destroot layer2/ObjectVolume.c:1330:18: warning: unused variable 'max_val' [-Wunused-variable]
3457:info:destroot   float min_val, max_val;
3458:info:destroot                  ^
3459:info:destroot In file included from layer2/ObjectMap.c:42:
3460:info:destroot In file included from /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17:
3461:info:destroot In file included from /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1804:
3462:info:destroot /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by "          "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings]
3463:info:destroot #warning "Using deprecated NumPy API, disable it by " \
3464:info:destroot  ^
3465:info:destroot layer2/ObjectMap.c:2684:5: warning: implicit declaration of function 'UtilNCopy' is invalid in C99 [-Wimplicit-function-declaration]
3466:info:destroot     UtilNCopy(ms->Symmetry->SpaceGroup, space_group_numbers[ispg], WordLength);
3467:info:destroot     ^
3468:info:destroot In file included from layer2/ObjectMap.c:42:
3469:info:destroot In file included from /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:26:
3470:info:destroot /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include/numpy/__multiarray_api.h:1629:1: warning: unused function '_import_array' [-Wunused-function]
3471:info:destroot _import_array(void)
3472:info:destroot ^
3473:info:destroot 9 warnings generated.
3474:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/RepAngle.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/RepAngle.o -ffast-math -funroll-loops -O3 -g -fcommon
3475:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/Rep.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/Rep.o -ffast-math -funroll-loops -O3 -g -fcommon
3476:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/RepCartoon.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/RepCartoon.o -ffast-math -funroll-loops -O3 -g -fcommon
3477:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/Scene.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/Scene.o -ffast-math -funroll-loops -O3 -g -fcommon
3478:info:destroot layer1/Scene.c:9193:7: warning: 'gluPerspective' is deprecated: first deprecated in OS X 10.9 - "Use GLKMatrix4MakePerspective" [-Wdeprecated-declarations]
3479:info:destroot       gluPerspective(fov, aspRat, I->FrontSafe, I->BackSafe);
3480:info:destroot       ^
3481:info:destroot /System/Library/Frameworks/OpenGL.framework/Headers/glu.h:278:13: note: 'gluPerspective' has been explicitly marked deprecated here
3482:info:destroot extern void gluPerspective (GLdouble fovy, GLdouble aspect, GLdouble zNear, GLdouble zFar) OPENGL_DEPRECATED_MSG(10_0, 10_9, "Use GLKMatrix4MakePerspective");
3483:info:destroot             ^
3484:info:destroot 3 warnings generated.
3485:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/ObjectMesh.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectMesh.o -ffast-math -funroll-loops -O3 -g -fcommon
3486:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/RepCylBond.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/RepCylBond.o -ffast-math -funroll-loops -O3 -g -fcommon
3487:info:destroot layer2/RepCylBond.c:2361:13: warning: unused function 'subdivide' [-Wunused-function]
3488:info:destroot static void subdivide(int n, float *x, float *y)
3489:info:destroot             ^
3490:info:destroot 1 warning generated.
3491:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/ObjectMolecule.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectMolecule.o -ffast-math -funroll-loops -O3 -g -fcommon
3492:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/RepMesh.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/RepMesh.o -ffast-math -funroll-loops -O3 -g -fcommon
3493:info:destroot 1 warning generated.
3494:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/RepDihedral.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/RepDihedral.o -ffast-math -funroll-loops -O3 -g -fcommon
3495:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/RepNonbonded.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/RepNonbonded.o -ffast-math -funroll-loops -O3 -g -fcommon
3496:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/RepDistDash.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/RepDistDash.o -ffast-math -funroll-loops -O3 -g -fcommon
3497:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/RepNonbondedSphere.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/RepNonbondedSphere.o -ffast-math -funroll-loops -O3 -g -fcommon
3498:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/RepDistLabel.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/RepDistLabel.o -ffast-math -funroll-loops -O3 -g -fcommon
3499:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/RepRibbon.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/RepRibbon.o -ffast-math -funroll-loops -O3 -g -fcommon
3500:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/RepDot.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/RepDot.o -ffast-math -funroll-loops -O3 -g -fcommon
3501:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/RepSphere.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/RepSphere.o -ffast-math -funroll-loops -O3 -g -fcommon
3502:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/RepEllipsoid.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/RepEllipsoid.o -ffast-math -funroll-loops -O3 -g -fcommon
3503:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/RepLabel.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/RepLabel.o -ffast-math -funroll-loops -O3 -g -fcommon
3504:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/RepSurface.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/RepSurface.o -ffast-math -funroll-loops -O3 -g -fcommon
3505:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer3/PlugIOManager.c -o build/temp.macosx-10.10-x86_64-2.7/layer3/PlugIOManager.o -ffast-math -funroll-loops -O3 -g -fcommon
3506:info:destroot layer2/RepSurface.c:4281:31: warning: unused function 'SurfaceJobAtomInfoVLAFromPyTuple' [-Wunused-function]
3507:info:destroot OV_INLINE SurfaceJobAtomInfo *SurfaceJobAtomInfoVLAFromPyTuple(PyObject * tuple)
3508:info:destroot                               ^
3509:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer3/Seeker.c -o build/temp.macosx-10.10-x86_64-2.7/layer3/Seeker.o -ffast-math -funroll-loops -O3 -g -fcommon
3510:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer3/Selector.c -o build/temp.macosx-10.10-x86_64-2.7/layer3/Selector.o -ffast-math -funroll-loops -O3 -g -fcommon
3511:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/TypeFace.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/TypeFace.o -ffast-math -funroll-loops -O3 -g -fcommon
3512:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/View.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/View.o -ffast-math -funroll-loops -O3 -g -fcommon
3513:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/Wizard.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/Wizard.o -ffast-math -funroll-loops -O3 -g -fcommon
3514:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/AtomInfo.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/AtomInfo.o -ffast-math -funroll-loops -O3 -g -fcommon
3515:info:destroot 1 warning generated.
3516:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/RepWireBond.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/RepWireBond.o -ffast-math -funroll-loops -O3 -g -fcommon
3517:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/ObjectMolecule2.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectMolecule2.o -ffast-math -funroll-loops -O3 -g -fcommon
3518:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/CoordSet.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/CoordSet.o -ffast-math -funroll-loops -O3 -g -fcommon
3519:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/Sculpt.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/Sculpt.o -ffast-math -funroll-loops -O3 -g -fcommon
3520:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/DistSet.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/DistSet.o -ffast-math -funroll-loops -O3 -g -fcommon
3521:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3522:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c:43:
3523:info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:706:12: warning: unused function 'symmetry_expand' [-Wunused-function]
3524:info:destroot static int symmetry_expand(qm_atom_t **atoms, int numunique, int natoms,
3525:info:destroot            ^
3526:info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:830:13: warning: unused function 'eatline' [-Wunused-function]
3527:info:destroot static void eatline(FILE * fd, int n)
3528:info:destroot             ^
3529:info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:841:13: warning: unused function 'eatwhitelines' [-Wunused-function]
3530:info:destroot static void eatwhitelines(FILE *file) {
3531:info:destroot             ^
3532:info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:890:12: warning: unused function 'iswhiteline' [-Wunused-function]
3533:info:destroot static int iswhiteline(char *s) {
3534:info:destroot            ^
3535:info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:896:14: warning: unused function 'strtoupper' [-Wunused-function]
3536:info:destroot static char *strtoupper(char *s) {
3537:info:destroot              ^
3538:info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:957:12: warning: unused function 'goto_keyline' [-Wunused-function]
3539:info:destroot static int goto_keyline(FILE *file, ...) {
3540:info:destroot            ^
3541:info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:1001:12: warning: unused function 'have_keyline' [-Wunused-function]
3542:info:destroot static int have_keyline(FILE *file, const char *keystring1,
3543:info:destroot            ^
3544:info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:1072:13: warning: unused function 'thisline' [-Wunused-function]
3545:info:destroot static void thisline(FILE *file) {
3546:info:destroot             ^
3547:info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:1092:13: warning: unused function 'whereami' [-Wunused-function]
3548:info:destroot static void whereami(FILE *file) {
3549:info:destroot             ^
3550:info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:433:18: warning: unused function 'init_qmdata' [-Wunused-function]
3551:info:destroot static qmdata_t* init_qmdata(qmdata_t *data) {
3552:info:destroot                  ^
3553:info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:466:27: warning: unused function 'add_wavefunction' [-Wunused-function]
3554:info:destroot static qm_wavefunction_t* add_wavefunction(qm_timestep_t *ts) {
3555:info:destroot                           ^
3556:info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:485:13: warning: unused function 'replace_wavefunction' [-Wunused-function]
3557:info:destroot static void replace_wavefunction(qm_timestep_t *ts, int n) {
3558:info:destroot             ^
3559:info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:502:13: warning: unused function 'del_wavefunction' [-Wunused-function]
3560:info:destroot static void del_wavefunction(qm_timestep_t *ts) {
3561:info:destroot             ^
3562:info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:535:13: warning: unused function 'angular_momentum_expon' [-Wunused-function]
3563:info:destroot static void angular_momentum_expon(int  *ang_mom_expon,
3564:info:destroot             ^
3565:info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:580:13: warning: unused function 'print_matrix4' [-Wunused-function]
3566:info:destroot static void print_matrix4(const float mat[16]) {
3567:info:destroot             ^
3568:info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:1023:12: warning: unused function 'fpexpftoc' [-Wunused-function]
3569:info:destroot static int fpexpftoc(char *ftocstr) {
3570:info:destroot            ^
3571:info:destroot 16 warnings generated.
3572:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/binposplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3573:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/SculptCache.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/SculptCache.o -ffast-math -funroll-loops -O3 -g -fcommon
3574:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/carplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/carplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3575:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/corplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/corplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3576:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/VFont.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/VFont.o -ffast-math -funroll-loops -O3 -g -fcommon
3577:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/crdplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/crdplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3578:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3579:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer3/Editor.c -o build/temp.macosx-10.10-x86_64-2.7/layer3/Editor.o -ffast-math -funroll-loops -O3 -g -fcommon
3580:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c:51:
3581:info:destroot contrib/uiuc/plugins/molfile_plugin/src/fastio.h:468:12: warning: unused function 'fio_read_int32' [-Wunused-function]
3582:info:destroot static int fio_read_int32(fio_fd fd, int *i) {
3583:info:destroot            ^
3584:info:destroot contrib/uiuc/plugins/molfile_plugin/src/fastio.h:472:12: warning: unused function 'fio_write_str' [-Wunused-function]
3585:info:destroot static int fio_write_str(fio_fd fd, const char *str) {
3586:info:destroot            ^
3587:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c:60:
3588:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: unused function 'swap2_unaligned' [-Wunused-function]
3589:info:destroot static void swap2_unaligned(void *v, long ndata) {
3590:info:destroot             ^
3591:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: unused function 'swap2_aligned' [-Wunused-function]
3592:info:destroot static void swap2_aligned(void *v, long ndata) {
3593:info:destroot             ^
3594:info:destroot 4 warnings generated.
3595:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3596:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3597:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:160:
3598:info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:890:12: warning: unused function 'iswhiteline' [-Wunused-function]
3599:info:destroot static int iswhiteline(char *s) {
3600:info:destroot            ^
3601:info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:896:14: warning: unused function 'strtoupper' [-Wunused-function]
3602:info:destroot static char *strtoupper(char *s) {
3603:info:destroot              ^
3604:info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:1072:13: warning: unused function 'thisline' [-Wunused-function]
3605:info:destroot static void thisline(FILE *file) {
3606:info:destroot             ^
3607:info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:1092:13: warning: unused function 'whereami' [-Wunused-function]
3608:info:destroot static void whereami(FILE *file) {
3609:info:destroot             ^
3610:info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:580:13: warning: unused function 'print_matrix4' [-Wunused-function]
3611:info:destroot static void print_matrix4(const float mat[16]) {
3612:info:destroot             ^
3613:info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:1023:12: warning: unused function 'fpexpftoc' [-Wunused-function]
3614:info:destroot static int fpexpftoc(char *ftocstr) {
3615:info:destroot            ^
3616:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:162:
3617:info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:95:20: warning: unused function 'get_pte_label' [-Wunused-function]
3618:info:destroot static const char *get_pte_label(const int idx)
3619:info:destroot                    ^
3620:info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:102:14: warning: unused function 'get_pte_mass' [-Wunused-function]
3621:info:destroot static float get_pte_mass(const int idx)
3622:info:destroot              ^
3623:info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:109:14: warning: unused function 'get_pte_vdw_radius' [-Wunused-function]
3624:info:destroot static float get_pte_vdw_radius(const int idx)
3625:info:destroot              ^
3626:info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:133:12: warning: unused function 'get_pte_idx' [-Wunused-function]
3627:info:destroot static int get_pte_idx(const char *label)
3628:info:destroot            ^
3629:info:destroot contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:997:13: warning: unused function 'print_input_data' [-Wunused-function]
3630:info:destroot static void print_input_data(qmdata_t *data) {
3631:info:destroot             ^
3632:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer4/Cmd.c -o build/temp.macosx-10.10-x86_64-2.7/layer4/Cmd.o -ffast-math -funroll-loops -O3 -g -fcommon
3633:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer3/Executive.c -o build/temp.macosx-10.10-x86_64-2.7/layer3/Executive.o -ffast-math -funroll-loops -O3 -g -fcommon
3634:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3635:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c:33:
3636:info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:133:12: warning: unused function 'get_pte_idx' [-Wunused-function]
3637:info:destroot static int get_pte_idx(const char *label)
3638:info:destroot            ^
3639:info:destroot layer4/Cmd.c:5985:29: warning: '&&' within '||' [-Wlogical-op-parentheses]
3640:info:destroot       if(ray || !G->HaveGUI && (!SceneGetCopyType(G) || width || height)) {
3641:info:destroot              ~~ ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
3642:info:destroot layer4/Cmd.c:5985:29: note: place parentheses around the '&&' expression to silence this warning
3643:info:destroot       if(ray || !G->HaveGUI && (!SceneGetCopyType(G) || width || height)) {
3644:info:destroot                             ^
3645:info:destroot                 (                                                       )
3646:info:destroot 1 warning generated.
3647:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.o -ffast-math -funroll-loops -O3 -g -fcommon
3648:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3649:info:destroot layer3/Executive.c:4495:50: warning: data argument not used by format string [-Wformat-extra-args]
3650:info:destroot       " GetHistogram-Error: wrong object type.", objName ENDFB(G);
3651:info:destroot       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  ^
3652:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/psfplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3653:info:destroot layer3/Executive.c:5898:19: warning: incompatible pointer to integer conversion assigning to 'int' from 'CSymmetry *' [-Wint-conversion]
3654:info:destroot   ok_assert(1, ok = symmetry);
3655:info:destroot                   ^ ~~~~~~~~
3656:info:destroot layer0/Err.h:32:31: note: expanded from macro 'ok_assert'
3657:info:destroot #define ok_assert(x, c) {if(!(c)) ok_raise(x);}
3658:info:destroot                               ^
3659:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c:29:
3660:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/fortread.h:28:
3661:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: unused function 'swap2_unaligned' [-Wunused-function]
3662:info:destroot static void swap2_unaligned(void *v, long ndata) {
3663:info:destroot             ^
3664:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: unused function 'swap4_unaligned' [-Wunused-function]
3665:info:destroot static void swap4_unaligned(void *v, long ndata) {
3666:info:destroot             ^
3667:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: unused function 'swap8_unaligned' [-Wunused-function]
3668:info:destroot static void swap8_unaligned(void *v, long ndata) {
3669:info:destroot             ^
3670:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: unused function 'swap2_aligned' [-Wunused-function]
3671:info:destroot static void swap2_aligned(void *v, long ndata) {
3672:info:destroot             ^
3673:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: unused function 'swap8_aligned' [-Wunused-function]
3674:info:destroot static void swap8_aligned(void *v, long ndata) {
3675:info:destroot             ^
3676:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c:29:
3677:info:destroot contrib/uiuc/plugins/molfile_plugin/src/fortread.h:36:12: warning: unused function 'fort_eat_recmark' [-Wunused-function]
3678:info:destroot static int fort_eat_recmark(FILE *ifp, int recmarklen) {
3679:info:destroot            ^
3680:info:destroot contrib/uiuc/plugins/molfile_plugin/src/fortread.h:55:12: warning: unused function 'fort_get_endian_reclen' [-Wunused-function]
3681:info:destroot static int fort_get_endian_reclen(int reclen, int word0, int word1,
3682:info:destroot            ^
3683:info:destroot contrib/uiuc/plugins/molfile_plugin/src/fortread.h:103:12: warning: unused function 'fortread_4' [-Wunused-function]
3684:info:destroot static int fortread_4(void *dest, int n, int swap, FILE *fd) {
3685:info:destroot            ^
3686:info:destroot 8 warnings generated.
3687:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3688:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3689:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3690:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c:42:
3691:info:destroot contrib/uiuc/plugins/molfile_plugin/src/vaspplugin.h:111:13: warning: unused function 'vasp_timestep_unitcell' [-Wunused-function]
3692:info:destroot static void vasp_timestep_unitcell(molfile_timestep_t *ts, vasp_plugindata_t *data)
3693:info:destroot             ^
3694:info:destroot 11 warnings generated.
3695:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/hash.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/hash.o -ffast-math -funroll-loops -O3 -g -fcommon
3696:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/jsplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3697:info:destroot 1 warning generated.
3698:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3699:info:destroot contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c:403:16: warning: unused variable 'bszmask' [-Wunused-variable]
3700:info:destroot     fio_size_t bszmask;
3701:info:destroot                ^
3702:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c:87:
3703:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/hash.h:37:
3704:info:destroot contrib/uiuc/plugins/molfile_plugin/src/hash.c:183:21: warning: unused function 'hash_delete' [-Wunused-function]
3705:info:destroot VMDEXTERNSTATIC int hash_delete(hash_t *tptr, const char *key) {
3706:info:destroot                     ^
3707:info:destroot contrib/uiuc/plugins/molfile_plugin/src/hash.c:270:24: warning: unused function 'hash_stats' [-Wunused-function]
3708:info:destroot VMDEXTERNSTATIC char * hash_stats(hash_t *tptr) {
3709:info:destroot                        ^
3710:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c:88:
3711:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: unused function 'swap2_unaligned' [-Wunused-function]
3712:info:destroot static void swap2_unaligned(void *v, long ndata) {
3713:info:destroot             ^
3714:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: unused function 'swap4_unaligned' [-Wunused-function]
3715:info:destroot static void swap4_unaligned(void *v, long ndata) {
3716:info:destroot             ^
3717:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: unused function 'swap8_unaligned' [-Wunused-function]
3718:info:destroot static void swap8_unaligned(void *v, long ndata) {
3719:info:destroot             ^
3720:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c:41:
3721:info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: unused function 'get_pte_idx_from_string' [-Wunused-function]
3722:info:destroot static int get_pte_idx_from_string(const char *label) {
3723:info:destroot            ^
3724:info:destroot 1 warning generated.
3725:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3726:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c:42:
3727:info:destroot contrib/uiuc/plugins/molfile_plugin/src/vaspplugin.h:111:13: warning: unused function 'vasp_timestep_unitcell' [-Wunused-function]
3728:info:destroot static void vasp_timestep_unitcell(molfile_timestep_t *ts, vasp_plugindata_t *data)
3729:info:destroot             ^
3730:info:destroot 1 warning generated.
3731:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3732:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c:41:
3733:info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: unused function 'get_pte_idx_from_string' [-Wunused-function]
3734:info:destroot static int get_pte_idx_from_string(const char *label) {
3735:info:destroot            ^
3736:info:destroot 1 warning generated.
3737:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3738:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c:41:
3739:info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: unused function 'get_pte_idx_from_string' [-Wunused-function]
3740:info:destroot static int get_pte_idx_from_string(const char *label) {
3741:info:destroot            ^
3742:info:destroot 6 warnings generated.
3743:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3744:info:destroot 1 warning generated.
3745:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3746:info:destroot contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c:82:23: warning: expression which evaluates to zero treated as a null pointer constant of type 'char *' [-Wnon-literal-null-conversion]
3747:info:destroot        if (end) end = '\0';
3748:info:destroot                       ^~~~
3749:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c:48:
3750:info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: unused function 'get_pte_idx_from_string' [-Wunused-function]
3751:info:destroot static int get_pte_idx_from_string(const char *label) {
3752:info:destroot            ^
3753:info:destroot contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c:828:7: warning: unused variable 's_expon' [-Wunused-variable]
3754:info:destroot         char s_expon[128], s_coeff1[128], s_coeff2[128];
3755:info:destroot              ^
3756:info:destroot contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c:828:21: warning: unused variable 's_coeff1' [-Wunused-variable]
3757:info:destroot         char s_expon[128], s_coeff1[128], s_coeff2[128];
3758:info:destroot                            ^
3759:info:destroot contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c:828:36: warning: unused variable 's_coeff2' [-Wunused-variable]
3760:info:destroot         char s_expon[128], s_coeff1[128], s_coeff2[128];
3761:info:destroot                                           ^
3762:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c:37:
3763:info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:95:20: warning: unused function 'get_pte_label' [-Wunused-function]
3764:info:destroot static const char *get_pte_label(const int idx)
3765:info:destroot                    ^
3766:info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:102:14: warning: unused function 'get_pte_mass' [-Wunused-function]
3767:info:destroot static float get_pte_mass(const int idx)
3768:info:destroot              ^
3769:info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:109:14: warning: unused function 'get_pte_vdw_radius' [-Wunused-function]
3770:info:destroot static float get_pte_vdw_radius(const int idx)
3771:info:destroot              ^
3772:info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:133:12: warning: unused function 'get_pte_idx' [-Wunused-function]
3773:info:destroot static int get_pte_idx(const char *label)
3774:info:destroot            ^
3775:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c:38:
3776:info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:706:12: warning: unused function 'symmetry_expand' [-Wunused-function]
3777:info:destroot static int symmetry_expand(qm_atom_t **atoms, int numunique, int natoms,
3778:info:destroot            ^
3779:info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:1001:12: warning: unused function 'have_keyline' [-Wunused-function]
3780:info:destroot static int have_keyline(FILE *file, const char *keystring1,
3781:info:destroot            ^
3782:info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:1072:13: warning: unused function 'thisline' [-Wunused-function]
3783:info:destroot static void thisline(FILE *file) {
3784:info:destroot             ^
3785:info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:1092:13: warning: unused function 'whereami' [-Wunused-function]
3786:info:destroot static void whereami(FILE *file) {
3787:info:destroot             ^
3788:info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:485:13: warning: unused function 'replace_wavefunction' [-Wunused-function]
3789:info:destroot static void replace_wavefunction(qm_timestep_t *ts, int n) {
3790:info:destroot             ^
3791:info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:502:13: warning: unused function 'del_wavefunction' [-Wunused-function]
3792:info:destroot static void del_wavefunction(qm_timestep_t *ts) {
3793:info:destroot             ^
3794:info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:580:13: warning: unused function 'print_matrix4' [-Wunused-function]
3795:info:destroot static void print_matrix4(const float mat[16]) {
3796:info:destroot             ^
3797:info:destroot 2 warnings generated.
3798:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3799:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3800:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c:57:
3801:info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: unused function 'get_pte_idx_from_string' [-Wunused-function]
3802:info:destroot static int get_pte_idx_from_string(const char *label) {
3803:info:destroot            ^
3804:info:destroot 1 warning generated.
3805:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/avsplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/avsplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3806:info:destroot 14 warnings generated.
3807:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3808:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3809:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp:47:
3810:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: unused function 'swap2_unaligned' [-Wunused-function]
3811:info:destroot static void swap2_unaligned(void *v, long ndata) {
3812:info:destroot             ^
3813:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: unused function 'swap4_unaligned' [-Wunused-function]
3814:info:destroot static void swap4_unaligned(void *v, long ndata) {
3815:info:destroot             ^
3816:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: unused function 'swap8_unaligned' [-Wunused-function]
3817:info:destroot static void swap8_unaligned(void *v, long ndata) {
3818:info:destroot             ^
3819:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: unused function 'swap2_aligned' [-Wunused-function]
3820:info:destroot static void swap2_aligned(void *v, long ndata) {
3821:info:destroot             ^
3822:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: unused function 'swap8_aligned' [-Wunused-function]
3823:info:destroot static void swap8_aligned(void *v, long ndata) {
3824:info:destroot             ^
3825:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp:48:
3826:info:destroot contrib/uiuc/plugins/molfile_plugin/src/fortread.h:36:12: warning: unused function 'fort_eat_recmark' [-Wunused-function]
3827:info:destroot static int fort_eat_recmark(FILE *ifp, int recmarklen) {
3828:info:destroot            ^
3829:info:destroot contrib/uiuc/plugins/molfile_plugin/src/fortread.h:55:12: warning: unused function 'fort_get_endian_reclen' [-Wunused-function]
3830:info:destroot static int fort_get_endian_reclen(int reclen, int word0, int word1,
3831:info:destroot            ^
3832:info:destroot contrib/uiuc/plugins/molfile_plugin/src/fortread.h:133:13: warning: unused function 'strnwscpy' [-Wunused-function]
3833:info:destroot static void strnwscpy(char *target, const char *source, const int len) {
3834:info:destroot             ^
3835:info:destroot 1 warning generated.
3836:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer4/Export.c -o build/temp.macosx-10.10-x86_64-2.7/layer4/Export.o -ffast-math -funroll-loops -O3 -g -fcommon
3837:info:destroot 8 warnings generated.
3838:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/graspplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3839:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3840:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:40:
3841:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: unused function 'swap2_unaligned' [-Wunused-function]
3842:info:destroot static void swap2_unaligned(void *v, long ndata) {
3843:info:destroot             ^
3844:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: unused function 'swap4_unaligned' [-Wunused-function]
3845:info:destroot static void swap4_unaligned(void *v, long ndata) {
3846:info:destroot             ^
3847:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: unused function 'swap8_unaligned' [-Wunused-function]
3848:info:destroot static void swap8_unaligned(void *v, long ndata) {
3849:info:destroot             ^
3850:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: unused function 'swap8_aligned' [-Wunused-function]
3851:info:destroot static void swap8_aligned(void *v, long ndata) {
3852:info:destroot             ^
3853:info:destroot 4 warnings generated.
3854:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/grdplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/grdplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3855:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer4/Menu.c -o build/temp.macosx-10.10-x86_64-2.7/layer4/Menu.o -ffast-math -funroll-loops -O3 -g -fcommon
3856:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/grdplugin.cpp:51:
3857:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: unused function 'swap2_unaligned' [-Wunused-function]
3858:info:destroot static void swap2_unaligned(void *v, long ndata) {
3859:info:destroot             ^
3860:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: unused function 'swap4_unaligned' [-Wunused-function]
3861:info:destroot static void swap4_unaligned(void *v, long ndata) {
3862:info:destroot             ^
3863:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: unused function 'swap8_unaligned' [-Wunused-function]
3864:info:destroot static void swap8_unaligned(void *v, long ndata) {
3865:info:destroot             ^
3866:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: unused function 'swap2_aligned' [-Wunused-function]
3867:info:destroot static void swap2_aligned(void *v, long ndata) {
3868:info:destroot             ^
3869:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: unused function 'swap8_aligned' [-Wunused-function]
3870:info:destroot static void swap8_aligned(void *v, long ndata) {
3871:info:destroot             ^
3872:info:destroot 5 warnings generated.
3873:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/gridplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3874:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3875:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp:59:
3876:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: unused function 'swap2_unaligned' [-Wunused-function]
3877:info:destroot static void swap2_unaligned(void *v, long ndata) {
3878:info:destroot             ^
3879:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: unused function 'swap4_unaligned' [-Wunused-function]
3880:info:destroot static void swap4_unaligned(void *v, long ndata) {
3881:info:destroot             ^
3882:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: unused function 'swap8_unaligned' [-Wunused-function]
3883:info:destroot static void swap8_unaligned(void *v, long ndata) {
3884:info:destroot             ^
3885:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: unused function 'swap2_aligned' [-Wunused-function]
3886:info:destroot static void swap2_aligned(void *v, long ndata) {
3887:info:destroot             ^
3888:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: unused function 'swap8_aligned' [-Wunused-function]
3889:info:destroot static void swap8_aligned(void *v, long ndata) {
3890:info:destroot             ^
3891:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp:60:
3892:info:destroot contrib/uiuc/plugins/molfile_plugin/src/fortread.h:36:12: warning: unused function 'fort_eat_recmark' [-Wunused-function]
3893:info:destroot static int fort_eat_recmark(FILE *ifp, int recmarklen) {
3894:info:destroot            ^
3895:info:destroot contrib/uiuc/plugins/molfile_plugin/src/fortread.h:55:12: warning: unused function 'fort_get_endian_reclen' [-Wunused-function]
3896:info:destroot static int fort_get_endian_reclen(int reclen, int word0, int word1,
3897:info:destroot            ^
3898:info:destroot contrib/uiuc/plugins/molfile_plugin/src/fortread.h:133:13: warning: unused function 'strnwscpy' [-Wunused-function]
3899:info:destroot static void strnwscpy(char *target, const char *source, const int len) {
3900:info:destroot             ^
3901:info:destroot 8 warnings generated.
3902:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3903:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer4/PopUp.c -o build/temp.macosx-10.10-x86_64-2.7/layer4/PopUp.o -ffast-math -funroll-loops -O3 -g -fcommon
3904:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/brixplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3905:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp:30:
3906:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h:48:
3907:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: unused function 'swap2_unaligned' [-Wunused-function]
3908:info:destroot static void swap2_unaligned(void *v, long ndata) {
3909:info:destroot             ^
3910:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: unused function 'swap4_unaligned' [-Wunused-function]
3911:info:destroot static void swap4_unaligned(void *v, long ndata) {
3912:info:destroot             ^
3913:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: unused function 'swap8_unaligned' [-Wunused-function]
3914:info:destroot static void swap8_unaligned(void *v, long ndata) {
3915:info:destroot             ^
3916:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: unused function 'swap2_aligned' [-Wunused-function]
3917:info:destroot static void swap2_aligned(void *v, long ndata) {
3918:info:destroot             ^
3919:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3920:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp:44:
3921:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: unused function 'swap2_unaligned' [-Wunused-function]
3922:info:destroot static void swap2_unaligned(void *v, long ndata) {
3923:info:destroot             ^
3924:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: unused function 'swap4_unaligned' [-Wunused-function]
3925:info:destroot static void swap4_unaligned(void *v, long ndata) {
3926:info:destroot             ^
3927:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: unused function 'swap8_unaligned' [-Wunused-function]
3928:info:destroot static void swap8_unaligned(void *v, long ndata) {
3929:info:destroot             ^
3930:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: unused function 'swap2_aligned' [-Wunused-function]
3931:info:destroot static void swap2_aligned(void *v, long ndata) {
3932:info:destroot             ^
3933:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: unused function 'swap8_aligned' [-Wunused-function]
3934:info:destroot static void swap8_aligned(void *v, long ndata) {
3935:info:destroot             ^
3936:info:destroot 5 warnings generated.
3937:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3938:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:42:
3939:info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:133:12: warning: unused function 'get_pte_idx' [-Wunused-function]
3940:info:destroot static int get_pte_idx(const char *label)
3941:info:destroot            ^
3942:info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: unused function 'get_pte_idx_from_string' [-Wunused-function]
3943:info:destroot static int get_pte_idx_from_string(const char *label) {
3944:info:destroot            ^
3945:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer5/main.c -o build/temp.macosx-10.10-x86_64-2.7/layer5/main.o -ffast-math -funroll-loops -O3 -g -fcommon
3946:info:destroot 2 warnings generated.
3947:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3948:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp:63:
3949:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: unused function 'swap4_unaligned' [-Wunused-function]
3950:info:destroot static void swap4_unaligned(void *v, long ndata) {
3951:info:destroot             ^
3952:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: unused function 'swap8_unaligned' [-Wunused-function]
3953:info:destroot static void swap8_unaligned(void *v, long ndata) {
3954:info:destroot             ^
3955:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:110:13: warning: unused function 'swap4_aligned' [-Wunused-function]
3956:info:destroot static void swap4_aligned(void *v, long ndata) {
3957:info:destroot             ^
3958:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: unused function 'swap8_aligned' [-Wunused-function]
3959:info:destroot static void swap8_aligned(void *v, long ndata) {
3960:info:destroot             ^
3961:info:destroot 4 warnings generated.
3962:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3963:info:destroot 4 warnings generated.
3964:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3965:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer5/PyMOL.c -o build/temp.macosx-10.10-x86_64-2.7/layer5/PyMOL.o -ffast-math -funroll-loops -O3 -g -fcommon
3966:info:destroot layer5/PyMOL.c:959:37: warning: unused function 'return_status' [-Wunused-function]
3967:info:destroot CC_INLINE static PyMOLreturn_status return_status(int status)
3968:info:destroot                                     ^
3969:info:destroot 2 warnings generated.
3970:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/parmplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3971:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3972:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp:53:
3973:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: unused function 'swap2_unaligned' [-Wunused-function]
3974:info:destroot static void swap2_unaligned(void *v, long ndata) {
3975:info:destroot             ^
3976:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: unused function 'swap4_unaligned' [-Wunused-function]
3977:info:destroot static void swap4_unaligned(void *v, long ndata) {
3978:info:destroot             ^
3979:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: unused function 'swap8_unaligned' [-Wunused-function]
3980:info:destroot static void swap8_unaligned(void *v, long ndata) {
3981:info:destroot             ^
3982:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: unused function 'swap2_aligned' [-Wunused-function]
3983:info:destroot static void swap2_aligned(void *v, long ndata) {
3984:info:destroot             ^
3985:info:destroot 4 warnings generated.
3986:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/phiplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3987:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/pltplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
3988:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp:42:
3989:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: unused function 'swap2_unaligned' [-Wunused-function]
3990:info:destroot static void swap2_unaligned(void *v, long ndata) {
3991:info:destroot             ^
3992:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: unused function 'swap4_unaligned' [-Wunused-function]
3993:info:destroot static void swap4_unaligned(void *v, long ndata) {
3994:info:destroot             ^
3995:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: unused function 'swap8_unaligned' [-Wunused-function]
3996:info:destroot static void swap8_unaligned(void *v, long ndata) {
3997:info:destroot             ^
3998:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: unused function 'swap2_aligned' [-Wunused-function]
3999:info:destroot static void swap2_aligned(void *v, long ndata) {
4000:info:destroot             ^
4001:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: unused function 'swap8_aligned' [-Wunused-function]
4002:info:destroot static void swap8_aligned(void *v, long ndata) {
4003:info:destroot             ^
4004:info:destroot 5 warnings generated.
4005:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
4006:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/situsplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
4007:info:destroot contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:680:44: warning: field 'eno' is uninitialized when used here [-Wuninitialized]
4008:info:destroot       : std::runtime_error(text + strerror(eno)), eno(_eno){}
4009:info:destroot                                            ^
4010:info:destroot contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp:1883:9: warning: unused variable 'last_ctnumber' [-Wunused-variable]
4011:info:destroot     int last_ctnumber = -1;
4012:info:destroot         ^
4013:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
4014:info:destroot contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp:277:10: warning: unused variable 'y' [-Wunused-variable]
4015:info:destroot   int x, y, z, xsize, ysize, zsize, xysize, total;
4016:info:destroot          ^
4017:info:destroot contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp:277:13: warning: unused variable 'z' [-Wunused-variable]
4018:info:destroot   int x, y, z, xsize, ysize, zsize, xysize, total;
4019:info:destroot             ^
4020:info:destroot contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp:277:7: warning: unused variable 'x' [-Wunused-variable]
4021:info:destroot   int x, y, z, xsize, ysize, zsize, xysize, total;
4022:info:destroot       ^
4023:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp:36:
4024:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: unused function 'swap2_unaligned' [-Wunused-function]
4025:info:destroot static void swap2_unaligned(void *v, long ndata) {
4026:info:destroot             ^
4027:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: unused function 'swap4_unaligned' [-Wunused-function]
4028:info:destroot static void swap4_unaligned(void *v, long ndata) {
4029:info:destroot             ^
4030:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: unused function 'swap8_unaligned' [-Wunused-function]
4031:info:destroot static void swap8_unaligned(void *v, long ndata) {
4032:info:destroot             ^
4033:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: unused function 'swap2_aligned' [-Wunused-function]
4034:info:destroot static void swap2_aligned(void *v, long ndata) {
4035:info:destroot             ^
4036:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: unused function 'swap8_aligned' [-Wunused-function]
4037:info:destroot static void swap8_aligned(void *v, long ndata) {
4038:info:destroot             ^
4039:info:destroot 8 warnings generated.
4040:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/stlplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
4041:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
4042:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:70:
4043:info:destroot contrib/uiuc/plugins/molfile_plugin/src/vmddir.h:137:12: warning: unused function 'vmd_file_is_executable' [-Wunused-function]
4044:info:destroot static int vmd_file_is_executable(const char * filename) {
4045:info:destroot            ^
4046:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:71:
4047:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: unused function 'swap2_unaligned' [-Wunused-function]
4048:info:destroot static void swap2_unaligned(void *v, long ndata) {
4049:info:destroot             ^
4050:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: unused function 'swap2_aligned' [-Wunused-function]
4051:info:destroot static void swap2_aligned(void *v, long ndata) {
4052:info:destroot             ^
4053:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:110:13: warning: unused function 'swap4_aligned' [-Wunused-function]
4054:info:destroot static void swap4_aligned(void *v, long ndata) {
4055:info:destroot             ^
4056:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: unused function 'swap8_aligned' [-Wunused-function]
4057:info:destroot static void swap8_aligned(void *v, long ndata) {
4058:info:destroot             ^
4059:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp:47:
4060:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: unused function 'swap2_unaligned' [-Wunused-function]
4061:info:destroot static void swap2_unaligned(void *v, long ndata) {
4062:info:destroot             ^
4063:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: unused function 'swap8_unaligned' [-Wunused-function]
4064:info:destroot static void swap8_unaligned(void *v, long ndata) {
4065:info:destroot             ^
4066:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: unused function 'swap2_aligned' [-Wunused-function]
4067:info:destroot static void swap2_aligned(void *v, long ndata) {
4068:info:destroot             ^
4069:info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: unused function 'swap8_aligned' [-Wunused-function]
4070:info:destroot static void swap8_aligned(void *v, long ndata) {
4071:info:destroot             ^
4072:info:destroot 4 warnings generated.
4073:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
4074:info:destroot 1 warning generated.
4075:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer5/TestPyMOL.c -o build/temp.macosx-10.10-x86_64-2.7/layer5/TestPyMOL.o -ffast-math -funroll-loops -O3 -g -fcommon
4076:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
4077:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c modules/cealign/src/ccealignmodule.cpp -o build/temp.macosx-10.10-x86_64-2.7/modules/cealign/src/ccealignmodule.o -ffast-math -funroll-loops -O3 -g -fcommon
4078:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:37:
4079:info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: unused function 'get_pte_idx_from_string' [-Wunused-function]
4080:info:destroot static int get_pte_idx_from_string(const char *label) {
4081:info:destroot            ^
4082:info:destroot 1 warning generated.
4083:info:destroot In file included from modules/cealign/src/ccealignmodule.cpp:32:
4084:info:destroot In file included from modules/cealign/src/ccealignmodule.H:37:
4085:info:destroot In file included from modules/cealign/src/tnt/tnt.h:43:
4086:info:destroot modules/cealign/src/tnt/tnt_matrix.h:549:15: warning: unused variable 'N' [-Wunused-variable]
4087:info:destroot     Subscript N = A.num_cols();
4088:info:destroot               ^
4089:info:destroot 1 warning generated.
4090:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c build/generated/ShaderText.c -o build/temp.macosx-10.10-x86_64-2.7/build/generated/ShaderText.o -ffast-math -funroll-loops -O3 -g -fcommon
4091:info:destroot 6 warnings generated.
4092:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/dxplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/dxplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
4093:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/edmplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
4094:info:destroot contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp:220:7: warning: unused variable 'leftover' [-Wunused-variable]
4095:info:destroot   int leftover = (nperslice - (nlines - 1) * 6);
4096:info:destroot       ^
4097:info:destroot contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp:207:10: warning: unused variable 'l' [-Wunused-variable]
4098:info:destroot   int z, l, sentinel, convcnt;
4099:info:destroot          ^
4100:info:destroot 1 warning generated.
4101:info:destroot 2 warnings generated.
4102:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/mapplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
4103:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
4104:info:destroot contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp:135:7: warning: unused variable 'retval' [-Wunused-variable]
4105:info:destroot   int retval;
4106:info:destroot       ^
4107:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp:45:
4108:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/hash.h:37:
4109:info:destroot contrib/uiuc/plugins/molfile_plugin/src/hash.c:183:21: warning: unused function 'hash_delete' [-Wunused-function]
4110:info:destroot VMDEXTERNSTATIC int hash_delete(hash_t *tptr, const char *key) {
4111:info:destroot                     ^
4112:info:destroot contrib/uiuc/plugins/molfile_plugin/src/hash.c:270:24: warning: unused function 'hash_stats' [-Wunused-function]
4113:info:destroot VMDEXTERNSTATIC char * hash_stats(hash_t *tptr) {
4114:info:destroot                        ^
4115:info:destroot 3 warnings generated.
4116:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/mmcif.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/mmcif.o -ffast-math -funroll-loops -O3 -g -fcommon
4117:info:destroot contrib/uiuc/plugins/molfile_plugin/src/mmcif.cpp:85:14: warning: unused variable 'data' [-Wunused-variable]
4118:info:destroot   mmcifdata *data = (mmcifdata *)mydata;
4119:info:destroot              ^
4120:info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/mmcif.cpp:64:
4121:info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:95:20: warning: unused function 'get_pte_label' [-Wunused-function]
4122:info:destroot static const char *get_pte_label(const int idx)
4123:info:destroot                    ^
4124:info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:102:14: warning: unused function 'get_pte_mass' [-Wunused-function]
4125:info:destroot static float get_pte_mass(const int idx)
4126:info:destroot              ^
4127:info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:109:14: warning: unused function 'get_pte_vdw_radius' [-Wunused-function]
4128:info:destroot static float get_pte_vdw_radius(const int idx)
4129:info:destroot              ^
4130:info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:133:12: warning: unused function 'get_pte_idx' [-Wunused-function]
4131:info:destroot static int get_pte_idx(const char *label)
4132:info:destroot            ^
4133:info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: unused function 'get_pte_idx_from_string' [-Wunused-function]
4134:info:destroot static int get_pte_idx_from_string(const char *label) {
4135:info:destroot            ^
4136:info:destroot contrib/uiuc/plugins/molfile_plugin/src/mmcif.cpp:98:14: warning: unused function 'open_mmcif_write' [-Wunused-function]
4137:info:destroot static void *open_mmcif_write(const char *filename, const char *filetype,
4138:info:destroot              ^
4139:info:destroot 7 warnings generated.
4140:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.o -ffast-math -funroll-loops -O3 -g -fcommon
4141:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.o -ffast-math -funroll-loops -O3 -g -fcommon
4142:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.o -ffast-math -funroll-loops -O3 -g -fcommon
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build/temp.macosx-10.10-x86_64-2.7/layer3/PlugIOManager.o build/temp.macosx-10.10-x86_64-2.7/layer3/Seeker.o build/temp.macosx-10.10-x86_64-2.7/layer3/Selector.o build/temp.macosx-10.10-x86_64-2.7/layer4/Cmd.o build/temp.macosx-10.10-x86_64-2.7/layer4/Export.o build/temp.macosx-10.10-x86_64-2.7/layer4/Menu.o build/temp.macosx-10.10-x86_64-2.7/layer4/PopUp.o build/temp.macosx-10.10-x86_64-2.7/layer5/main.o build/temp.macosx-10.10-x86_64-2.7/layer5/PyMOL.o build/temp.macosx-10.10-x86_64-2.7/layer5/TestPyMOL.o build/temp.macosx-10.10-x86_64-2.7/modules/cealign/src/ccealignmodule.o build/temp.macosx-10.10-x86_64-2.7/build/generated/ShaderText.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/binposplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/carplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/corplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/crdplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/hash.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/jsplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/psfplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/avsplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/brixplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/dxplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/edmplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/graspplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/grdplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/gridplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/mapplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/mmcif.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/parmplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/phiplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/pltplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/situsplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/stlplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.o -L/opt/local/lib -L/usr/lib -lpng -lfreetype -lGLEW -lGL -lGLU -lglut -o build/lib.macosx-10.10-x86_64-2.7/pymol/_cmd.so
4144:info:destroot building 'chempy.champ._champ' extension
4145:info:destroot creating build/temp.macosx-10.10-x86_64-2.7/contrib/champ
4146:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Icontrib/champ -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/champ/champ_module.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/champ/champ_module.o
4147:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Icontrib/champ -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/champ/chiral.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/champ/chiral.o
4148:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Icontrib/champ -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/champ/err2.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/champ/err2.o
4149:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Icontrib/champ -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/champ/champ.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/champ/champ.o
4150:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Icontrib/champ -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/champ/feedback2.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/champ/feedback2.o
4151:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Icontrib/champ -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/champ/list.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/champ/list.o
4152:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Icontrib/champ -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/champ/os_memory.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/champ/os_memory.o
4153:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Icontrib/champ -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/champ/sort.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/champ/sort.o
4154:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Icontrib/champ -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/champ/strblock.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/champ/strblock.o
4155:info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Icontrib/champ -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/champ/vla.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/champ/vla.o
4156:info:destroot /usr/bin/clang -bundle -undefined dynamic_lookup -L/opt/local/lib -Wl,-headerpad_max_install_names -L/opt/local/lib/db48 build/temp.macosx-10.10-x86_64-2.7/contrib/champ/champ.o build/temp.macosx-10.10-x86_64-2.7/contrib/champ/champ_module.o build/temp.macosx-10.10-x86_64-2.7/contrib/champ/chiral.o build/temp.macosx-10.10-x86_64-2.7/contrib/champ/err2.o build/temp.macosx-10.10-x86_64-2.7/contrib/champ/feedback2.o build/temp.macosx-10.10-x86_64-2.7/contrib/champ/list.o build/temp.macosx-10.10-x86_64-2.7/contrib/champ/os_memory.o build/temp.macosx-10.10-x86_64-2.7/contrib/champ/sort.o build/temp.macosx-10.10-x86_64-2.7/contrib/champ/strblock.o build/temp.macosx-10.10-x86_64-2.7/contrib/champ/vla.o -o build/lib.macosx-10.10-x86_64-2.7/chempy/champ/_champ.so
4157:info:destroot running install_lib
4158:info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework
4159:info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions
4160:info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7
4161:info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib
4162:info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
4163:info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages
4164:info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy
4165:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy
4166:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/arc.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy
4167:info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/bmin
4168:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/bmin/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/bmin
4169:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/bmin/commands.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/bmin
4170:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/bmin/realtime.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/bmin
4171:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/bmin/state.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/bmin
4172:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/bmin/util.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/bmin
4173:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/bond_amber.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy
4174:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/bond_mmff.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy
4175:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/bonds.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy
4176:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/brick.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy
4177:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/cc1.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy
4178:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/cex.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy
4179:info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/champ
4180:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/champ/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/champ
4181:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/champ/_champ.so -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/champ
4182:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/champ/amber99.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/champ
4183:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/champ/assign.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/champ
4184:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/champ/formal_charges.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/champ
4185:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/charge.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy
4186:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/cif.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy
4187:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/cpv.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy
4188:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/dictdb.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy
4189:info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/fast
4190:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/fast/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/fast
4191:info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/fragments
4192:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/fragments/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/fragments
4193:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/gamess1.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy
4194:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/gms.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy
4195:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/hetatm.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy
4196:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/io.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy
4197:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/lst.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy
4198:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/mae.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy
4199:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/map.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy
4200:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/mass.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy
4201:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/mmd.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy
4202:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/models.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy
4203:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/mol.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy
4204:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/mol2.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy
4205:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/neighbor.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy
4206:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/pdb.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy
4207:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/pkl.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy
4208:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/place.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy
4209:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/protein.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy
4210:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/protein_amber.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy
4211:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/protein_amber99.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy
4212:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/protein_mmff.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy
4213:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/protein_residues.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy
4214:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/sdf.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy
4215:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/solvate.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy
4216:info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/tinker
4217:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/tinker/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/tinker
4218:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/tinker/amber.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/tinker
4219:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/tinker/keyword.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/tinker
4220:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/tinker/realtime.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/tinker
4221:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/tinker/state.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/tinker
4222:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/water_amber.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy
4223:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/water_residues.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy
4224:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/xyz.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy
4225:info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk
4226:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pmg_tk/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk
4227:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pmg_tk/ColorEditor.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk
4228:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pmg_tk/Demo.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk
4229:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pmg_tk/PMGApp.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk
4230:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pmg_tk/PyMOLMapLoad.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk
4231:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pmg_tk/SetEditor.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk
4232:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pmg_tk/Setting.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk
4233:info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/skins
4234:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pmg_tk/skins/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/skins
4235:info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/skins/demo
4236:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pmg_tk/skins/demo/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/skins/demo
4237:info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/skins/normal
4238:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pmg_tk/skins/normal/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/skins/normal
4239:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pmg_tk/skins/normal/builder.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/skins/normal
4240:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pmg_tk/skins/normal/ModalWindow.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/skins/normal
4241:info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/startup
4242:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pmg_tk/startup/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/startup
4243:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pmg_tk/startup/apbs_tools.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/startup
4244:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pmg_tk/startup/remote_pdb_load.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/startup
4245:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pmg_tk/TextEditor.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk
4246:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pmg_tk/volume.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk
4247:info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_wx
4248:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pmg_wx/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_wx
4249:info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4250:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4251:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/_cmd.so -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4252:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/api.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4253:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/callback.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4254:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/cgo.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4255:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/checking.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4256:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/cmd.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4257:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/colorramping.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4258:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/commanding.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4259:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/completing.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4260:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/computing.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4261:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/constants.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4262:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/constants_palette.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4263:info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/contrib
4264:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/contrib/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/contrib
4265:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/controlling.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4266:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/creating.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4267:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/editing.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4268:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/editor.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4269:info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/embed
4270:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/embed/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/embed
4271:info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/embed/epymol
4272:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/embed/epymol/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/embed/epymol
4273:info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/embed/wxpymol
4274:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/embed/wxpymol/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/embed/wxpymol
4275:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/experimenting.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4276:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/exporting.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4277:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/externing.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4278:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/feedingback.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4279:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/fitting.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4280:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/gui.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4281:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/headering.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4282:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/helping.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4283:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/importing.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4284:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/internal.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4285:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/invocation.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4286:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/keyboard.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4287:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/keywords.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4288:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/locking.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4289:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/m4x.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4290:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/menu.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4291:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/monitoring.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4292:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/movie.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4293:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/moving.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4294:info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/opengl
4295:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/opengl/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/opengl
4296:info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/opengl/gl
4297:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/opengl/gl/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/opengl/gl
4298:info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/opengl/glu
4299:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/opengl/glu/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/opengl/glu
4300:info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/opengl/glut
4301:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/opengl/glut/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/opengl/glut
4302:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/parser.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4303:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/parsing.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4304:info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/plugins
4305:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/plugins/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/plugins
4306:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/plugins/installation.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/plugins
4307:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/plugins/legacysupport.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/plugins
4308:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/plugins/managergui.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/plugins
4309:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/plugins/repository.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/plugins
4310:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/povray.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4311:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/preset.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4312:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/querying.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4313:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/rpc.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4314:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/selecting.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4315:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/selector.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4316:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/setting.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4317:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/shortcut.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4318:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/util.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4319:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/vfont.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4320:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/viewing.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4321:info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard
4322:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard
4323:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/annotation.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard
4324:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/appearance.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard
4325:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/benchmark.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard
4326:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/box.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard
4327:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/charge.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard
4328:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/cleanup.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard
4329:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/demo.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard
4330:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/density.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard
4331:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/distance.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard
4332:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/dragging.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard
4333:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/fedora.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard
4334:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/filter.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard
4335:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/label.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard
4336:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/measurement.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard
4337:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/message.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard
4338:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/mutagenesis.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard
4339:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/pair_fit.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard
4340:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/pseudoatom.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard
4341:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/renaming.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard
4342:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/sculpting.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard
4343:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/security.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard
4344:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/stereodemo.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard
4345:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/toggle.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard
4346:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizarding.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4347:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/xray.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4348:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/xwin.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol
4349:info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol2
4350:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol2/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol2
4351:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol2/cmd2.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol2
4352:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol2/make_cmd2.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol2
4353:info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/web
4354:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/web/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/web
4355:info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/web/examples
4356:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/web/examples/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/web/examples
4357:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/web/examples/justhttpd.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/web/examples
4358:info:destroot copying build/lib.macosx-10.10-x86_64-2.7/web/pymolhttpd.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/web
4359:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/__init__.py to __init__.pyc
4360:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/arc.py to arc.pyc
4361:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/bmin/__init__.py to __init__.pyc
4362:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/bmin/commands.py to commands.pyc
4363:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/bmin/realtime.py to realtime.pyc
4364:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/bmin/state.py to state.pyc
4365:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/bmin/util.py to util.pyc
4366:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/bond_amber.py to bond_amber.pyc
4367:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/bond_mmff.py to bond_mmff.pyc
4368:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/bonds.py to bonds.pyc
4369:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/brick.py to brick.pyc
4370:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/cc1.py to cc1.pyc
4371:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/cex.py to cex.pyc
4372:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/champ/__init__.py to __init__.pyc
4373:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/champ/amber99.py to amber99.pyc
4374:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/champ/assign.py to assign.pyc
4375:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/champ/formal_charges.py to formal_charges.pyc
4376:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/charge.py to charge.pyc
4377:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/cif.py to cif.pyc
4378:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/cpv.py to cpv.pyc
4379:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/dictdb.py to dictdb.pyc
4380:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/fast/__init__.py to __init__.pyc
4381:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/fragments/__init__.py to __init__.pyc
4382:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/gamess1.py to gamess1.pyc
4383:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/gms.py to gms.pyc
4384:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/hetatm.py to hetatm.pyc
4385:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/io.py to io.pyc
4386:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/lst.py to lst.pyc
4387:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/mae.py to mae.pyc
4388:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/map.py to map.pyc
4389:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/mass.py to mass.pyc
4390:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/mmd.py to mmd.pyc
4391:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/models.py to models.pyc
4392:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/mol.py to mol.pyc
4393:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/mol2.py to mol2.pyc
4394:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/neighbor.py to neighbor.pyc
4395:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/pdb.py to pdb.pyc
4396:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/pkl.py to pkl.pyc
4397:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/place.py to place.pyc
4398:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/protein.py to protein.pyc
4399:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/protein_amber.py to protein_amber.pyc
4400:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/protein_amber99.py to protein_amber99.pyc
4401:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/protein_mmff.py to protein_mmff.pyc
4402:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/protein_residues.py to protein_residues.pyc
4403:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/sdf.py to sdf.pyc
4404:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/solvate.py to solvate.pyc
4405:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/tinker/__init__.py to __init__.pyc
4406:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/tinker/amber.py to amber.pyc
4407:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/tinker/keyword.py to keyword.pyc
4408:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/tinker/realtime.py to realtime.pyc
4409:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/tinker/state.py to state.pyc
4410:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/water_amber.py to water_amber.pyc
4411:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/water_residues.py to water_residues.pyc
4412:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/xyz.py to xyz.pyc
4413:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/__init__.py to __init__.pyc
4414:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/ColorEditor.py to ColorEditor.pyc
4415:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/Demo.py to Demo.pyc
4416:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/PMGApp.py to PMGApp.pyc
4417:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/PyMOLMapLoad.py to PyMOLMapLoad.pyc
4418:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/SetEditor.py to SetEditor.pyc
4419:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/Setting.py to Setting.pyc
4420:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/skins/__init__.py to __init__.pyc
4421:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/skins/demo/__init__.py to __init__.pyc
4422:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/skins/normal/__init__.py to __init__.pyc
4423:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/skins/normal/builder.py to builder.pyc
4424:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/skins/normal/ModalWindow.py to ModalWindow.pyc
4425:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/startup/__init__.py to __init__.pyc
4426:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/startup/apbs_tools.py to apbs_tools.pyc
4427:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/startup/remote_pdb_load.py to remote_pdb_load.pyc
4428:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/TextEditor.py to TextEditor.pyc
4429:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/volume.py to volume.pyc
4430:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_wx/__init__.py to __init__.pyc
4431:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/__init__.py to __init__.pyc
4432:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/api.py to api.pyc
4433:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/callback.py to callback.pyc
4434:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/cgo.py to cgo.pyc
4435:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/checking.py to checking.pyc
4436:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/cmd.py to cmd.pyc
4437:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/colorramping.py to colorramping.pyc
4438:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/commanding.py to commanding.pyc
4439:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/completing.py to completing.pyc
4440:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/computing.py to computing.pyc
4441:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/constants.py to constants.pyc
4442:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/constants_palette.py to constants_palette.pyc
4443:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/contrib/__init__.py to __init__.pyc
4444:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/controlling.py to controlling.pyc
4445:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/creating.py to creating.pyc
4446:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/editing.py to editing.pyc
4447:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/editor.py to editor.pyc
4448:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/embed/__init__.py to __init__.pyc
4449:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/embed/epymol/__init__.py to __init__.pyc
4450:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/embed/wxpymol/__init__.py to __init__.pyc
4451:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/experimenting.py to experimenting.pyc
4452:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/exporting.py to exporting.pyc
4453:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/externing.py to externing.pyc
4454:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/feedingback.py to feedingback.pyc
4455:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/fitting.py to fitting.pyc
4456:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/gui.py to gui.pyc
4457:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/headering.py to headering.pyc
4458:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/helping.py to helping.pyc
4459:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/importing.py to importing.pyc
4460:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/internal.py to internal.pyc
4461:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/invocation.py to invocation.pyc
4462:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/keyboard.py to keyboard.pyc
4463:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/keywords.py to keywords.pyc
4464:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/locking.py to locking.pyc
4465:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/m4x.py to m4x.pyc
4466:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/menu.py to menu.pyc
4467:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/monitoring.py to monitoring.pyc
4468:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/movie.py to movie.pyc
4469:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/moving.py to moving.pyc
4470:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/opengl/__init__.py to __init__.pyc
4471:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/opengl/gl/__init__.py to __init__.pyc
4472:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/opengl/glu/__init__.py to __init__.pyc
4473:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/opengl/glut/__init__.py to __init__.pyc
4474:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/parser.py to parser.pyc
4475:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/parsing.py to parsing.pyc
4476:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/plugins/__init__.py to __init__.pyc
4477:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/plugins/installation.py to installation.pyc
4478:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/plugins/legacysupport.py to legacysupport.pyc
4479:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/plugins/managergui.py to managergui.pyc
4480:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/plugins/repository.py to repository.pyc
4481:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/povray.py to povray.pyc
4482:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/preset.py to preset.pyc
4483:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/querying.py to querying.pyc
4484:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/rpc.py to rpc.pyc
4485:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/selecting.py to selecting.pyc
4486:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/selector.py to selector.pyc
4487:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/setting.py to setting.pyc
4488:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/shortcut.py to shortcut.pyc
4489:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/util.py to util.pyc
4490:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/vfont.py to vfont.pyc
4491:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/viewing.py to viewing.pyc
4492:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/__init__.py to __init__.pyc
4493:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/annotation.py to annotation.pyc
4494:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/appearance.py to appearance.pyc
4495:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/benchmark.py to benchmark.pyc
4496:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/box.py to box.pyc
4497:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/charge.py to charge.pyc
4498:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/cleanup.py to cleanup.pyc
4499:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/demo.py to demo.pyc
4500:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/density.py to density.pyc
4501:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/distance.py to distance.pyc
4502:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/dragging.py to dragging.pyc
4503:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/fedora.py to fedora.pyc
4504:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/filter.py to filter.pyc
4505:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/label.py to label.pyc
4506:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/measurement.py to measurement.pyc
4507:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/message.py to message.pyc
4508:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/mutagenesis.py to mutagenesis.pyc
4509:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/pair_fit.py to pair_fit.pyc
4510:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/pseudoatom.py to pseudoatom.pyc
4511:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/renaming.py to renaming.pyc
4512:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/sculpting.py to sculpting.pyc
4513:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/security.py to security.pyc
4514:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/stereodemo.py to stereodemo.pyc
4515:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/toggle.py to toggle.pyc
4516:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizarding.py to wizarding.pyc
4517:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/xray.py to xray.pyc
4518:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/xwin.py to xwin.pyc
4519:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol2/__init__.py to __init__.pyc
4520:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol2/cmd2.py to cmd2.pyc
4521:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol2/make_cmd2.py to make_cmd2.pyc
4522:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/web/__init__.py to __init__.pyc
4523:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/web/examples/__init__.py to __init__.pyc
4524:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/web/examples/justhttpd.py to justhttpd.pyc
4525:info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/web/pymolhttpd.py to pymolhttpd.pyc
4526:info:destroot running install_egg_info
4527:info:destroot Writing /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol-1.7.1.1-py2.7.egg-info
4528:info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/pymol_path
4529:info:destroot copying LICENSE -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/pymol_path
4530:info:destroot copying data -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/pymol_path/data
4531:info:destroot copying test -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/pymol_path/test
4532:info:destroot copying scripts -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/pymol_path/scripts
4533:info:destroot copying examples -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/pymol_path/examples
4534:info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin
4535:info:destroot copying pymol -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin
4536:debug:destroot Executing proc-post-org.macports.destroot-destroot-0
4537:debug:destroot Executing proc-post-org.macports.destroot-destroot-1
4538:error:destroot org.macports.destroot for port pymol returned: error copying "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol/setup/pymol_macports" to "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/bin/pymol": file already exists
4539:debug:destroot Error code: NONE
4540:debug:destroot Backtrace: error copying "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol/setup/pymol_macports" to "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/bin/pymol": file already exists
4541    while executing
4542"proc-post-org.macports.destroot-destroot-1 org.macports.destroot"
4543    ("eval" body line 1)
4544    invoked from within
4545"eval $post $targetname"
4546:info:destroot Warning: targets not executed for pymol: org.macports.activate org.macports.destroot org.macports.install
4547:notice:destroot Please see the log file for port pymol for details:
4548    /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/main.log