Ticket #51124: main.log

File main.log, 39.6 KB (added by amadeus24, 8 years ago)

main.log

Line 
1version:1
2:msg:main --->  Computing dependencies for h4h5tools:info:main .:debug:main h4h5tools has no conflicts
3:debug:main Searching for dependency: hdf5
4:debug:main Found Dependency: receipt exists for hdf5
5:debug:main Searching for dependency: hdf4
6:debug:main Found Dependency: receipt exists for hdf4
7:debug:main Searching for dependency: netcdf
8:debug:main Found Dependency: receipt exists for netcdf
9:msg:main
10:debug:main Executing org.macports.main (h4h5tools)
11:debug:main changing euid/egid - current euid: 0 - current egid: 0
12:debug:main egid changed to: 501
13:debug:main euid changed to: 502
14:debug:archivefetch archivefetch phase started at Tue Apr 12 14:50:19 CEST 2016
15:msg:archivefetch --->  Fetching archive for h4h5tools
16:debug:archivefetch Executing org.macports.archivefetch (h4h5tools)
17:debug:archivefetch euid/egid changed to: 0/0
18:debug:archivefetch chowned /opt/local/var/macports/incoming to macports
19:debug:archivefetch euid/egid changed to: 502/501
20:info:archivefetch --->  h4h5tools-2.2.1_10.darwin_14.x86_64.tbz2 doesn't seem to exist in /opt/local/var/macports/incoming/verified
21:msg:archivefetch --->  Attempting to fetch h4h5tools-2.2.1_10.darwin_14.x86_64.tbz2 from https://packages.macports.org/h4h5tools
22:debug:archivefetch Fetching archive failed:: The requested URL returned error: 404 Not Found
23:msg:archivefetch --->  Attempting to fetch h4h5tools-2.2.1_10.darwin_14.x86_64.tbz2 from http://osl.no.packages.macports.org/h4h5tools
24:debug:archivefetch Fetching archive failed:: The requested URL returned error: 404 Not Found
25:msg:archivefetch --->  Attempting to fetch h4h5tools-2.2.1_10.darwin_14.x86_64.tbz2 from http://nue.de.packages.macports.org/h4h5tools
26:debug:archivefetch Fetching archive failed:: The requested URL returned error: 404 Not Found
27:debug:archivefetch Privilege de-escalation not attempted as not running as root.
28:debug:fetch fetch phase started at Tue Apr 12 14:50:27 CEST 2016
29:notice:fetch --->  Fetching distfiles for h4h5tools
30:debug:fetch Executing org.macports.fetch (h4h5tools)
31:debug:fetch Privilege de-escalation not attempted as not running as root.
32:debug:checksum checksum phase started at Tue Apr 12 14:50:27 CEST 2016
33:notice:checksum --->  Verifying checksums for h4h5tools
34:debug:checksum Executing org.macports.checksum (h4h5tools)
35:info:checksum --->  Checksumming h4h5tools-2.2.1.tar.gz
36:debug:checksum Calculated (rmd160) is f90ac82c900e59564fe9d4da93dd2cf70cd87763
37:debug:checksum Correct (rmd160) checksum for h4h5tools-2.2.1.tar.gz
38:debug:checksum Calculated (sha256) is a814e5312355a97dc41b837dfcf057d925844b6a00f06c6d68fe9418094eb893
39:debug:checksum Correct (sha256) checksum for h4h5tools-2.2.1.tar.gz
40:debug:checksum Privilege de-escalation not attempted as not running as root.
41:debug:extract extract phase started at Tue Apr 12 14:50:27 CEST 2016
42:notice:extract --->  Extracting h4h5tools
43:debug:extract Executing org.macports.extract (h4h5tools)
44:info:extract --->  Extracting h4h5tools-2.2.1.tar.gz
45:debug:extract setting option extract.args to '/opt/local/var/macports/distfiles/h4h5tools/h4h5tools-2.2.1.tar.gz'
46:debug:extract Environment:
47CC_PRINT_OPTIONS='YES'
48CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_h4h5tools/h4h5tools/work/.CC_PRINT_OPTIONS'
49CPATH='/opt/local/include'
50LIBRARY_PATH='/opt/local/lib'
51MACOSX_DEPLOYMENT_TARGET='10.10'
52:debug:extract Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_h4h5tools/h4h5tools/work" && /usr/bin/gzip -dc '/opt/local/var/macports/distfiles/h4h5tools/h4h5tools-2.2.1.tar.gz' | /usr/bin/tar -xf -'
53:debug:extract Executing command line:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_h4h5tools/h4h5tools/work" && /usr/bin/gzip -dc '/opt/local/var/macports/distfiles/h4h5tools/h4h5tools-2.2.1.tar.gz' | /usr/bin/tar -xf -
54:debug:extract euid/egid changed to: 0/0
55:debug:extract chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_h4h5tools/h4h5tools/work to macports
56:debug:extract euid/egid changed to: 502/501
57:debug:extract Privilege de-escalation not attempted as not running as root.
58:debug:patch patch phase started at Tue Apr 12 14:50:28 CEST 2016
59:debug:patch Executing org.macports.patch (h4h5tools)
60:debug:patch Privilege de-escalation not attempted as not running as root.
61:debug:configure configure phase started at Tue Apr 12 14:50:28 CEST 2016
62:notice:configure --->  Configuring h4h5tools
63:debug:configure Using compiler 'Xcode Clang'
64:debug:configure Executing org.macports.configure (h4h5tools)
65:debug:configure Environment:
66CC='/opt/local/bin/h4cc'
67CC_PRINT_OPTIONS='YES'
68CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_h4h5tools/h4h5tools/work/.CC_PRINT_OPTIONS'
69CFLAGS='-pipe -Os -arch x86_64'
70CPATH='/opt/local/include'
71CPPFLAGS='-I/opt/local/include'
72CXX='/usr/bin/clang++'
73CXXFLAGS='-pipe -Os -arch x86_64 -stdlib=libc++'
74F77FLAGS='-m64'
75F90FLAGS='-pipe -Os -m64'
76FCFLAGS='-pipe -Os -m64'
77FFLAGS='-pipe -Os'
78INSTALL='/usr/bin/install -c'
79LDFLAGS='-L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64'
80LIBRARY_PATH='/opt/local/lib'
81MACOSX_DEPLOYMENT_TARGET='10.10'
82OBJC='/usr/bin/clang'
83OBJCFLAGS='-pipe -Os -arch x86_64'
84OBJCXX='/usr/bin/clang++'
85OBJCXXFLAGS='-pipe -Os -arch x86_64 -stdlib=libc++'
86:debug:configure Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_h4h5tools/h4h5tools/work/h4h5tools-2.2.1" && ./configure --prefix=/opt/local'
87:debug:configure Executing command line:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_h4h5tools/h4h5tools/work/h4h5tools-2.2.1" && ./configure --prefix=/opt/local
88:info:configure checking for a BSD-compatible install... /usr/bin/install -c
89:info:configure checking whether build environment is sane... yes
90:info:configure checking for gawk... gawk
91:info:configure checking whether make sets $(MAKE)... yes
92:info:configure checking whether to enable maintainer-specific portions of Makefiles... no
93:info:configure checking for ranlib... ranlib
94:info:configure checking build system type... i686-apple-darwin14.5.0
95:info:configure checking host system type... i686-apple-darwin14.5.0
96:info:configure checking shell variables initial values... done
97:info:configure checking for gcc... /opt/local/bin/h4cc
98:info:configure checking for C compiler default output file name... a.out
99:info:configure checking whether the C compiler works... yes
100:info:configure checking whether we are cross compiling... no
101:info:configure checking for suffix of executables...
102:info:configure checking for suffix of object files... o
103:info:configure checking whether we are using the GNU C compiler... yes
104:info:configure checking whether /opt/local/bin/h4cc accepts -g... yes
105:info:configure checking for /opt/local/bin/h4cc option to accept ANSI C... none needed
106:info:configure checking for style of include used by make... GNU
107:info:configure checking dependency style of /opt/local/bin/h4cc... gcc3
108:info:configure checking if should build only statically linked executables... no
109:info:configure checking for perl... perl
110:info:configure checking for ar... ar
111:info:configure checking whether make sets $(MAKE)... (cached) yes
112:info:configure checking for a BSD-compatible install... /usr/bin/install -c
113:info:configure checking how to run the C preprocessor... /opt/local/bin/h4cc -E
114:info:configure checking for egrep... grep -E
115:info:configure checking for ANSI C header files... yes
116:info:configure checking make... GNU make
117:info:configure checking how make searches directories... VPATH=DIR1 DIR2 ...
118:info:configure checking hdf5.h usability... yes
119:info:configure checking hdf5.h presence... yes
120:info:configure checking for hdf5.h... yes
121:info:configure checking for H5open in -lhdf5... yes
122:info:configure checking for deflate filter in hdf5 library... yes
123:info:configure checking for szlib filter in hdf5 library... no
124:info:configure checking for szlib compression in hdf4 library... no
125:info:configure checking for production mode... "production"
126:info:configure configure: creating ./config.status
127:info:configure config.status: creating config/depend1
128:info:configure config.status: creating config/depend2
129:info:configure config.status: creating config/depend3
130:info:configure config.status: creating config/depend4
131:info:configure config.status: creating config/dependN
132:info:configure config.status: creating config/commence
133:info:configure config.status: creating config/conclude
134:info:configure config.status: creating Makefile
135:info:configure config.status: creating doc/Makefile
136:info:configure config.status: creating lib/Makefile
137:info:configure config.status: creating lib/examples/Makefile
138:info:configure config.status: creating lib/src/Makefile
139:info:configure config.status: creating lib/test/Makefile
140:info:configure config.status: creating lib/test/testh4toh5.sh
141:info:configure config.status: creating utils/Makefile
142:info:configure config.status: creating utils/h4toh5/Makefile
143:info:configure config.status: creating utils/h4toh5/testh4toh5.sh
144:info:configure config.status: creating utils/h5toh4/Makefile
145:info:configure config.status: creating utils/h5toh4/testh5toh4.sh
146:info:configure config.status: executing depfiles commands
147:debug:configure Privilege de-escalation not attempted as not running as root.
148:debug:build build phase started at Tue Apr 12 14:50:32 CEST 2016
149:notice:build --->  Building h4h5tools
150:debug:build Executing org.macports.build (h4h5tools)
151:debug:build Environment:
152CC_PRINT_OPTIONS='YES'
153CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_h4h5tools/h4h5tools/work/.CC_PRINT_OPTIONS'
154CPATH='/opt/local/include'
155LIBRARY_PATH='/opt/local/lib'
156MACOSX_DEPLOYMENT_TARGET='10.10'
157:debug:build Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_h4h5tools/h4h5tools/work/h4h5tools-2.2.1" && /usr/bin/make -j8 -w all'
158:debug:build Executing command line:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_h4h5tools/h4h5tools/work/h4h5tools-2.2.1" && /usr/bin/make -j8 -w all
159:info:build make: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_h4h5tools/h4h5tools/work/h4h5tools-2.2.1'
160:info:build Making all in lib
161:info:build make[1]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_h4h5tools/h4h5tools/work/h4h5tools-2.2.1/lib'
162:info:build Making all in src
163:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_h4h5tools/h4h5tools/work/h4h5tools-2.2.1/lib/src'
164:info:build if /opt/local/bin/h4cc -DPACKAGE_NAME=\"H4H5Tools\" -DPACKAGE_TARNAME=\"h4h5tools\" -DPACKAGE_VERSION=\"2.2.1\" -DPACKAGE_STRING=\"H4H5Tools\ 2.2.1\" -DPACKAGE_BUGREPORT=\"help@hdfgroup.org\" -DPACKAGE=\"h4h5tools\" -DVERSION=\"2.2.1\" -DSTDC_HEADERS=1 -DHAVE_HDF5_H=1 -DHAVE_LIBHDF5=1  -I. -I.   -I/opt/local/include  -pipe -Os -arch x86_64 -MT H4TOH5I.o -MD -MP -MF ".deps/H4TOH5I.Tpo" -c -o H4TOH5I.o H4TOH5I.c; \
165:info:build     then mv -f ".deps/H4TOH5I.Tpo" ".deps/H4TOH5I.Po"; else rm -f ".deps/H4TOH5I.Tpo"; exit 1; fi
166:info:build if /opt/local/bin/h4cc -DPACKAGE_NAME=\"H4H5Tools\" -DPACKAGE_TARNAME=\"h4h5tools\" -DPACKAGE_VERSION=\"2.2.1\" -DPACKAGE_STRING=\"H4H5Tools\ 2.2.1\" -DPACKAGE_BUGREPORT=\"help@hdfgroup.org\" -DPACKAGE=\"h4h5tools\" -DVERSION=\"2.2.1\" -DSTDC_HEADERS=1 -DHAVE_HDF5_H=1 -DHAVE_LIBHDF5=1  -I. -I.   -I/opt/local/include  -pipe -Os -arch x86_64 -MT h4toh5anno.o -MD -MP -MF ".deps/h4toh5anno.Tpo" -c -o h4toh5anno.o h4toh5anno.c; \
167:info:build     then mv -f ".deps/h4toh5anno.Tpo" ".deps/h4toh5anno.Po"; else rm -f ".deps/h4toh5anno.Tpo"; exit 1; fi
168:info:build if /opt/local/bin/h4cc -DPACKAGE_NAME=\"H4H5Tools\" -DPACKAGE_TARNAME=\"h4h5tools\" -DPACKAGE_VERSION=\"2.2.1\" -DPACKAGE_STRING=\"H4H5Tools\ 2.2.1\" -DPACKAGE_BUGREPORT=\"help@hdfgroup.org\" -DPACKAGE=\"h4h5tools\" -DVERSION=\"2.2.1\" -DSTDC_HEADERS=1 -DHAVE_HDF5_H=1 -DHAVE_LIBHDF5=1  -I. -I.   -I/opt/local/include  -pipe -Os -arch x86_64 -MT h4toh5pal.o -MD -MP -MF ".deps/h4toh5pal.Tpo" -c -o h4toh5pal.o h4toh5pal.c; \
169:info:build     then mv -f ".deps/h4toh5pal.Tpo" ".deps/h4toh5pal.Po"; else rm -f ".deps/h4toh5pal.Tpo"; exit 1; fi
170:info:build if /opt/local/bin/h4cc -DPACKAGE_NAME=\"H4H5Tools\" -DPACKAGE_TARNAME=\"h4h5tools\" -DPACKAGE_VERSION=\"2.2.1\" -DPACKAGE_STRING=\"H4H5Tools\ 2.2.1\" -DPACKAGE_BUGREPORT=\"help@hdfgroup.org\" -DPACKAGE=\"h4h5tools\" -DVERSION=\"2.2.1\" -DSTDC_HEADERS=1 -DHAVE_HDF5_H=1 -DHAVE_LIBHDF5=1  -I. -I.   -I/opt/local/include  -pipe -Os -arch x86_64 -MT h4toh5sds.o -MD -MP -MF ".deps/h4toh5sds.Tpo" -c -o h4toh5sds.o h4toh5sds.c; \
171:info:build     then mv -f ".deps/h4toh5sds.Tpo" ".deps/h4toh5sds.Po"; else rm -f ".deps/h4toh5sds.Tpo"; exit 1; fi
172:info:build if /opt/local/bin/h4cc -DPACKAGE_NAME=\"H4H5Tools\" -DPACKAGE_TARNAME=\"h4h5tools\" -DPACKAGE_VERSION=\"2.2.1\" -DPACKAGE_STRING=\"H4H5Tools\ 2.2.1\" -DPACKAGE_BUGREPORT=\"help@hdfgroup.org\" -DPACKAGE=\"h4h5tools\" -DVERSION=\"2.2.1\" -DSTDC_HEADERS=1 -DHAVE_HDF5_H=1 -DHAVE_LIBHDF5=1  -I. -I.   -I/opt/local/include  -pipe -Os -arch x86_64 -MT h4toh5util.o -MD -MP -MF ".deps/h4toh5util.Tpo" -c -o h4toh5util.o h4toh5util.c; \
173:info:build     then mv -f ".deps/h4toh5util.Tpo" ".deps/h4toh5util.Po"; else rm -f ".deps/h4toh5util.Tpo"; exit 1; fi
174:info:build if /opt/local/bin/h4cc -DPACKAGE_NAME=\"H4H5Tools\" -DPACKAGE_TARNAME=\"h4h5tools\" -DPACKAGE_VERSION=\"2.2.1\" -DPACKAGE_STRING=\"H4H5Tools\ 2.2.1\" -DPACKAGE_BUGREPORT=\"help@hdfgroup.org\" -DPACKAGE=\"h4h5tools\" -DVERSION=\"2.2.1\" -DSTDC_HEADERS=1 -DHAVE_HDF5_H=1 -DHAVE_LIBHDF5=1  -I. -I.   -I/opt/local/include  -pipe -Os -arch x86_64 -MT h4toh5vdata.o -MD -MP -MF ".deps/h4toh5vdata.Tpo" -c -o h4toh5vdata.o h4toh5vdata.c; \
175:info:build     then mv -f ".deps/h4toh5vdata.Tpo" ".deps/h4toh5vdata.Po"; else rm -f ".deps/h4toh5vdata.Tpo"; exit 1; fi
176:info:build if /opt/local/bin/h4cc -DPACKAGE_NAME=\"H4H5Tools\" -DPACKAGE_TARNAME=\"h4h5tools\" -DPACKAGE_VERSION=\"2.2.1\" -DPACKAGE_STRING=\"H4H5Tools\ 2.2.1\" -DPACKAGE_BUGREPORT=\"help@hdfgroup.org\" -DPACKAGE=\"h4h5tools\" -DVERSION=\"2.2.1\" -DSTDC_HEADERS=1 -DHAVE_HDF5_H=1 -DHAVE_LIBHDF5=1  -I. -I.   -I/opt/local/include  -pipe -Os -arch x86_64 -MT h4toh5vgroup.o -MD -MP -MF ".deps/h4toh5vgroup.Tpo" -c -o h4toh5vgroup.o h4toh5vgroup.c; \
177:info:build     then mv -f ".deps/h4toh5vgroup.Tpo" ".deps/h4toh5vgroup.Po"; else rm -f ".deps/h4toh5vgroup.Tpo"; exit 1; fi
178:info:build if /opt/local/bin/h4cc -DPACKAGE_NAME=\"H4H5Tools\" -DPACKAGE_TARNAME=\"h4h5tools\" -DPACKAGE_VERSION=\"2.2.1\" -DPACKAGE_STRING=\"H4H5Tools\ 2.2.1\" -DPACKAGE_BUGREPORT=\"help@hdfgroup.org\" -DPACKAGE=\"h4h5tools\" -DVERSION=\"2.2.1\" -DSTDC_HEADERS=1 -DHAVE_HDF5_H=1 -DHAVE_LIBHDF5=1  -I. -I.   -I/opt/local/include  -pipe -Os -arch x86_64 -MT h4toh5image.o -MD -MP -MF ".deps/h4toh5image.Tpo" -c -o h4toh5image.o h4toh5image.c; \
179:info:build     then mv -f ".deps/h4toh5image.Tpo" ".deps/h4toh5image.Po"; else rm -f ".deps/h4toh5image.Tpo"; exit 1; fi
180:info:build In file included from H4TOH5I.c:51:
181:info:build In file included from ./H4TOH5Iprivate.h:25:
182:info:build In file included from ./H4TOH5Ipublic.h:24:
183:info:build In file included from /opt/local/include/hdf5.h:24:
184:info:build /opt/local/include/H5public.h:184:18: warning: 'long long' is an extension when C99 mode is not enabled [-Wlong-long]
185:info:build typedef unsigned long long      hsize_t;
186:info:build                  ^
187:info:build /opt/local/include/H5public.h:185:16: warning: 'long long' is an extension when C99 mode is not enabled [-Wlong-long]
188:info:build typedef signed long long        hssize_t;
189:info:build                ^
190:info:build In file included from h4toh5pal.c:62:
191:info:build In file included from ./h4toh5main.h:42:
192:info:build In file included from ./h4toh5util.h:45:
193:info:build In file included from /opt/local/include/hdf5.h:24:
194:info:build /opt/local/include/H5public.h:184:18: warning: 'long long' is an extension when C99 mode is not enabled [-Wlong-long]
195:info:build typedef unsigned long long      hsize_t;
196:info:build                  ^
197:info:build /opt/local/include/H5public.h:185:16: warning: 'long long' is an extension when C99 mode is not enabled [-Wlong-long]
198:info:build typedef signed long long        hssize_t;
199:info:build                ^
200:info:build In file included from h4toh5sds.c:69:
201:info:build In file included from ./h4toh5main.h:42:
202:info:build In file included from ./h4toh5util.h:45:
203:info:build In file included from /opt/local/include/hdf5.h:24:
204:info:build /opt/local/include/H5public.h:184:18: warning: 'long long' is an extension when C99 mode is not enabled [-Wlong-long]
205:info:build typedef unsigned long long      hsize_t;
206:info:build                  ^
207:info:build /opt/local/include/H5public.h:185:16: warning: 'long long' is an extension when C99 mode is not enabled [-Wlong-long]
208:info:build typedef signed long long        hssize_t;
209:info:build                ^
210:info:build In file included from h4toh5vdata.c:64:
211:info:build In file included from ./h4toh5main.h:42:
212:info:build In file included from ./h4toh5util.h:45:
213:info:build In file included from /opt/local/include/hdf5.h:24:
214:info:build /opt/local/include/H5public.h:184:18: warning: 'long long' is an extension when C99 mode is not enabled [-Wlong-long]
215:info:build typedef unsigned long long      hsize_t;
216:info:build                  ^
217:info:build /opt/local/include/H5public.h:185:16: warning: 'long long' is an extension when C99 mode is not enabled [-Wlong-long]
218:info:build typedef signed long long        hssize_t;
219:info:build                ^
220:info:build In file included from h4toh5anno.c:76:
221:info:build In file included from ./h4toh5main.h:42:
222:info:build In file included from ./h4toh5util.h:45:
223:info:build In file included from /opt/local/include/hdf5.h:24:
224:info:build /opt/local/include/H5public.h:184:18: warning: 'long long' is an extension when C99 mode is not enabled [-Wlong-long]
225:info:build typedef unsigned long long      hsize_t;
226:info:build                  ^
227:info:build /opt/local/include/H5public.h:185:16: warning: 'long long' is an extension when C99 mode is not enabled [-Wlong-long]
228:info:build typedef signed long long        hssize_t;
229:info:build                ^
230:info:build In file included from h4toh5util.c:63:
231:info:build In file included from ./h4toh5util.h:45:
232:info:build In file included from /opt/local/include/hdf5.h:24:
233:info:build /opt/local/include/H5public.h:184:18: warning: 'long long' is an extension when C99 mode is not enabled [-Wlong-long]
234:info:build typedef unsigned long long      hsize_t;
235:info:build                  ^
236:info:build /opt/local/include/H5public.h:185:16: warning: 'long long' is an extension when C99 mode is not enabled [-Wlong-long]
237:info:build typedef signed long long        hssize_t;
238:info:build                ^
239:info:build In file included from h4toh5vgroup.c:69:
240:info:build In file included from ./h4toh5main.h:42:
241:info:build In file included from ./h4toh5util.h:45:
242:info:build In file included from /opt/local/include/hdf5.h:24:
243:info:build /opt/local/include/H5public.h:184:18: warning: 'long long' is an extension when C99 mode is not enabled [-Wlong-long]
244:info:build typedef unsigned long long      hsize_t;
245:info:build                  ^
246:info:build /opt/local/include/H5public.h:185:16: warning: 'long long' is an extension when C99 mode is not enabled [-Wlong-long]
247:info:build typedef signed long long        hssize_t;
248:info:build                ^
249:info:build In file included from h4toh5image.c:61:
250:info:build In file included from ./h4toh5main.h:42:
251:info:build In file included from ./h4toh5util.h:45:
252:info:build In file included from /opt/local/include/hdf5.h:24:
253:info:build /opt/local/include/H5public.h:184:18: warning: 'long long' is an extension when C99 mode is not enabled [-Wlong-long]
254:info:build typedef unsigned long long      hsize_t;
255:info:build                  ^
256:info:build /opt/local/include/H5public.h:185:16: warning: 'long long' is an extension when C99 mode is not enabled [-Wlong-long]
257:info:build typedef signed long long        hssize_t;
258:info:build                ^
259:info:build In file included from h4toh5anno.c:76:
260:info:build In file included from ./h4toh5main.h:42:
261:info:build In file included from ./h4toh5util.h:45:
262:info:build In file included from /opt/local/include/hdf5.h:47:
263:info:build /opt/local/include/H5FDlog.h:62:76: warning: 'long long' is an extension when C99 mode is not enabled [-Wlong-long]
264:info:build H5_DLL herr_t H5Pset_fapl_log(hid_t fapl_id, const char *logfile, unsigned long long flags, size_t buf_size);
265:info:build                                                                            ^
266:info:build In file included from h4toh5vdata.c:64:
267:info:build In file included from ./h4toh5main.h:42:
268:info:build In file included from ./h4toh5util.h:45:
269:info:build In file included from /opt/local/include/hdf5.h:47:
270:info:build /opt/local/include/H5FDlog.h:62:76: warning: 'long long' is an extension when C99 mode is not enabled [-Wlong-long]
271:info:build H5_DLL herr_t H5Pset_fapl_log(hid_t fapl_id, const char *logfile, unsigned long long flags, size_t buf_size);
272:info:build                                                                            ^
273:info:build In file included from h4toh5util.c:63:
274:info:build In file included from ./h4toh5util.h:45:
275:info:build In file included from /opt/local/include/hdf5.h:47:
276:info:build /opt/local/include/H5FDlog.h:62:76: warning: 'long long' is an extension when C99 mode is not enabled [-Wlong-long]
277:info:build H5_DLL herr_t H5Pset_fapl_log(hid_t fapl_id, const char *logfile, unsigned long long flags, size_t buf_size);In file included from h4toh5sds.c:69:
278:info:build
279:info:build In file included from ./h4toh5main.h:42:
280:info:build                                                                            ^In file included from
281:info:build ./h4toh5util.h:45:
282:info:build In file included from /opt/local/include/hdf5.h:47:
283:info:build /opt/local/include/H5FDlog.h:62:76: In file included from h4toh5pal.c:62:
284:info:build In file included from ./h4toh5main.h:warning: 'long long' is an extension when C99 mode is not enabled [-Wlong-long]
285:info:build H5_DLL herr_t H5Pset_fapl_log(hid_t fapl_id, const char *logfile, unsigned long long flags, size_t buf_size);
286:info:build                                                                            ^
287:info:build 42:
288:info:build In file included from ./h4toh5util.hIn file included from h4toh5vgroup.c:69:
289:info:build In file included from ./h4toh5main.h:42:
290:info:build In file included from ./h4toh5util.h:45:45:
291:info:build In file included from /opt/local/include/hdf5.h:47:
292:info:build /opt/local/include/H5FDlog.h:62:76: warning: 'long long' is an extension when C99 mode is not enabled [-Wlong-long]
293:info:build H5_DLL herr_t H5Pset_fapl_log(hid_t fapl_id, const char *logfile, unsigned long long flags, size_t buf_size);
294:info:build                                                                            ^
295:info:build :
296:info:build In file included from /opt/local/include/hdf5.h:47:
297:info:build /opt/local/include/H5FDlog.h:62:76: warning: 'long long' is an extension when C99 mode is not enabled [-Wlong-long]
298:info:build H5_DLL herr_t H5Pset_fapl_log(hid_t fapl_id, const char *logfile, unsigned long long flags, size_t buf_size);
299:info:build In file included from H4TOH5I.c:51:
300:info:build In file included from ./H4TOH5Iprivate.h:25:
301:info:build In file included from ./H4TOH5Ipublic.h:24:
302:info:build In file included from /opt/local/include/hdf5.h:47:
303:info:build /opt/local/include/H5FDlog.h:62:76: warning: 'long long' is an extension when C99 mode is not enabled [-Wlong-long]
304:info:build H5_DLL herr_t H5Pset_fapl_log(hid_t fapl_id, const char *logfile, unsigned long long flags, size_t buf_size);
305:info:build                                                                            ^
306:info:build                                                                            ^
307:info:build In file included from h4toh5image.c:61:
308:info:build In file included from ./h4toh5main.h:42:
309:info:build In file included from ./h4toh5util.h:45:
310:info:build In file included from /opt/local/include/hdf5.h:47:
311:info:build /opt/local/include/H5FDlog.h:62:76: warning: 'long long' is an extension when C99 mode is not enabled [-Wlong-long]
312:info:build H5_DLL herr_t H5Pset_fapl_log(hid_t fapl_id, const char *logfile, unsigned long long flags, size_t buf_size);
313:info:build                                                                            ^
314:info:build H4TOH5I.c:250:14: warning: overflow in expression; result is 2147483647 with type 'int' [-Winteger-overflow]
315:info:build     new_id = H4TOH5I_MAKE(grp, grp_ptr->nextid);
316:info:build              ^
317:info:build H4TOH5I.c:106:21: note: expanded from macro 'H4TOH5I_MAKE'
318:info:build                              ((hid_t)(i)&ID_MASK))
319:info:build                                          ^
320:info:build H4TOH5I.c:85:31: note: expanded from macro 'ID_MASK'
321:info:build #define ID_MASK         ((1<<ID_BITS)-1)
322:info:build                                      ^
323:info:build H4TOH5I.c:272:40: warning: overflow in expression; result is 2147483647 with type 'int' [-Winteger-overflow]
324:info:build     if (grp_ptr->nextid > (h4toh5_uint)ID_MASK) {
325:info:build                                        ^
326:info:build H4TOH5I.c:85:31: note: expanded from macro 'ID_MASK'
327:info:build #define ID_MASK         ((1<<ID_BITS)-1)
328:info:build                                      ^
329:info:build H4TOH5I.c:288:30: warning: overflow in expression; result is 2147483647 with type 'int' [-Winteger-overflow]
330:info:build         for (i=grp_ptr->reserved; i<ID_MASK; i++) {
331:info:build                                     ^
332:info:build H4TOH5I.c:85:31: note: expanded from macro 'ID_MASK'
333:info:build #define ID_MASK         ((1<<ID_BITS)-1)
334:info:build                                      ^
335:info:build H4TOH5I.c:290:39: warning: overflow in expression; result is 2147483647 with type 'int' [-Winteger-overflow]
336:info:build             if (grp_ptr->nextid>(h4toh5_uint)ID_MASK) {
337:info:build                                              ^
338:info:build H4TOH5I.c:85:31: note: expanded from macro 'ID_MASK'
339:info:build #define ID_MASK         ((1<<ID_BITS)-1)
340:info:build                                      ^
341:info:build H4TOH5I.c:295:16: warning: overflow in expression; result is 2147483647 with type 'int' [-Winteger-overflow]
342:info:build             next_id = H4TOH5I_MAKE(grp, grp_ptr->nextid);
343:info:build                       ^
344:info:build H4TOH5I.c:106:21: note: expanded from macro 'H4TOH5I_MAKE'
345:info:build                              ((hid_t)(i)&ID_MASK))
346:info:build                                          ^
347:info:build H4TOH5I.c:85:31: note: expanded from macro 'ID_MASK'
348:info:build #define ID_MASK         ((1<<ID_BITS)-1)
349:info:build                                      ^
350:info:build H4TOH5I.c:308:22: warning: overflow in expression; result is 2147483647 with type 'int' [-Winteger-overflow]
351:info:build         if (i>=(h4toh5_uint)ID_MASK) {
352:info:build                             ^
353:info:build H4TOH5I.c:85:31: note: expanded from macro 'ID_MASK'
354:info:build #define ID_MASK         ((1<<ID_BITS)-1)
355:info:build                                      ^
356:info:build H4TOH5I.c:250:14: warning: shift count >= width of type [-Wshift-count-overflow]
357:info:build     new_id = H4TOH5I_MAKE(grp, grp_ptr->nextid);
358:info:build              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
359:info:build H4TOH5I.c:106:21: note: expanded from macro 'H4TOH5I_MAKE'
360:info:build                              ((hid_t)(i)&ID_MASK))
361:info:build                                          ^~~~~~~
362:info:build H4TOH5I.c:85:21: note: expanded from macro 'ID_MASK'
363:info:build #define ID_MASK         ((1<<ID_BITS)-1)
364:info:build                            ^ ~~~~~~~
365:info:build H4TOH5I.c:272:40: warning: shift count >= width of type [-Wshift-count-overflow]
366:info:build     if (grp_ptr->nextid > (h4toh5_uint)ID_MASK) {
367:info:build                                        ^~~~~~~
368:info:build H4TOH5I.c:85:21: note: expanded from macro 'ID_MASK'
369:info:build #define ID_MASK         ((1<<ID_BITS)-1)
370:info:build                            ^ ~~~~~~~
371:info:build H4TOH5I.c:288:30: warning: shift count >= width of type [-Wshift-count-overflow]
372:info:build         for (i=grp_ptr->reserved; i<ID_MASK; i++) {
373:info:build                                     ^~~~~~~
374:info:build H4TOH5I.c:85:21: note: expanded from macro 'ID_MASK'
375:info:build #define ID_MASK         ((1<<ID_BITS)-1)
376:info:build                            ^ ~~~~~~~
377:info:build H4TOH5I.c:290:39: warning: shift count >= width of type [-Wshift-count-overflow]
378:info:build             if (grp_ptr->nextid>(h4toh5_uint)ID_MASK) {
379:info:build                                              ^~~~~~~
380:info:build H4TOH5I.c:85:21: note: expanded from macro 'ID_MASK'
381:info:build #define ID_MASK         ((1<<ID_BITS)-1)
382:info:build                            ^ ~~~~~~~
383:info:build H4TOH5I.c:295:16: warning: shift count >= width of type [-Wshift-count-overflow]
384:info:build             next_id = H4TOH5I_MAKE(grp, grp_ptr->nextid);
385:info:build                       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
386:info:build H4TOH5I.c:106:21: note: expanded from macro 'H4TOH5I_MAKE'
387:info:build                              ((hid_t)(i)&ID_MASK))
388:info:build                                          ^~~~~~~
389:info:build H4TOH5I.c:85:21: note: expanded from macro 'ID_MASK'
390:info:build #define ID_MASK         ((1<<ID_BITS)-1)
391:info:build                            ^ ~~~~~~~
392:info:build H4TOH5I.c:308:22: warning: shift count >= width of type [-Wshift-count-overflow]
393:info:build         if (i>=(h4toh5_uint)ID_MASK) {
394:info:build                             ^~~~~~~
395:info:build H4TOH5I.c:85:21: note: expanded from macro 'ID_MASK'
396:info:build #define ID_MASK         ((1<<ID_BITS)-1)
397:info:build                            ^ ~~~~~~~
398:info:build In file included from In file included from h4toh5sds.ch4toh5pal.c::69:
399:info:build In file included from ./h4toh5main.hIn file included from In file included from 62h4toh5anno.c:
400:info:build :In file included from 76./h4toh5main.h:42h4toh5vdata.c:64:
401:info:build In file included from :
402:info:build ./h4toh5main.h:In file included from 42:
403:info:build :
404:info:build ./h4toh5util.h:./h4toh5util.h230::2301::1 :warning : warning// comments are not allowed in this language [-Wcomment]./h4toh5main.h: :// comments are not allowed in this language [-Wcomment]
405:info:build :42:
406:info:build ./h4toh5util.h:230:1: warning: // comments are not allowed in this language [-Wcomment]
407:info:build //For this release, we opt LIBH4TOH5_VERSION out. In the future release, we may use other way to record library version.
408:info:build ^
409:info:build //For this release, we opt LIBH4TOH5_VERSION out. In the future release, we may use other way to record library version.
410:info:build ^
411:info:build 42:
412:info:build ./h4toh5util.h:230
413:info:build In file included from h4toh5util.c://For this release, we opt LIBH4TOH5_VERSION out. In the future release, we may use other way to record library version. 63
414:info:build :
415:info:build ^./h4toh5util.h
416:info:build :230:1: warning: // comments are not allowed in this language [-Wcomment]
417:info:build //For this release, we opt LIBH4TOH5_VERSION out. In the future release, we may use other way to record library version.
418:info:build ^
419:info:build :1: warning: // comments are not allowed in this language [-Wcomment]
420:info:build //For this release, we opt LIBH4TOH5_VERSION out. In the future release, we may use other way to record library version.
421:info:build ^
422:info:build In file included from h4toh5vgroup.c:69:
423:info:build In file included from ./h4toh5main.h:42:
424:info:build ./h4toh5util.h:230:1: warning: // comments are not allowed in this language [-Wcomment]
425:info:build //For this release, we opt LIBH4TOH5_VERSION out. In the future release, we may use other way to record library version.
426:info:build ^
427:info:build In file included from h4toh5image.c:61:
428:info:build In file included from ./h4toh5main.h:42:
429:info:build ./h4toh5util.h:230:1: warning: // comments are not allowed in this language [-Wcomment]
430:info:build //For this release, we opt LIBH4TOH5_VERSION out. In the future release, we may use other way to record library version.
431:info:build ^
432:info:build h4toh5anno.c:680:5: error: conflicting types for 'H4toH5anno_file_all_labels'
433:info:build int H4toH5anno_file_all_labels(int h4toh5_id)
434:info:build     ^
435:info:build ./h4toh5.h:109:16: note: previous declaration is here
436:info:build __DLL425__ int H4toH5anno_file_all_labels(hid_t);
437:info:build                ^
438:info:build h4toh5anno.c:1233:5: error: conflicting types for 'H4toH5anno_obj_label'
439:info:build int H4toH5anno_obj_label(int        h4toh5_id,
440:info:build     ^
441:info:build ./h4toh5.h:111:16: note: previous declaration is here
442:info:build __DLL425__ int H4toH5anno_obj_label(hid_t,char*,char*,uint16, int32,char*,int);
443:info:build                ^
444:info:build h4toh5vdata.c:1635:30: warning: comparison of array 'svdattr_name' not equal to a null pointer is always true [-Wtautological-pointer-compare]
445:info:build     if (field_index != -1 && svdattr_name != NULL) {
446:info:build                              ^~~~~~~~~~~~    ~~~~
447:info:build h4toh5sds.c4 warnings and 2 errors generated.
448:info:build :1449:9: warning: unused variable 'use_eosswathdimscale' [-Wunused-variable]
449:info:build   int     use_eosswathdimscale = 0; /* using HDF-EOS2 swath dim scale */
450:info:build           ^
451:info:build h4toh5sds.c:1448:11: warning: unused variable 'use_eosgriddimscale' [-Wunused-variable]
452:info:build   int     use_eosgriddimscale = 0; /* using HDF-EOS2 grid dim scale */
453:info:build           ^
454:info:build h4toh5sds.c:1450:9: warning: unused variable 'use_fakedimscale' [-Wunused-variable]
455:info:build   int     use_fakedimscale = 0; /* creating fake dimensions */
456:info:build           ^
457:info:build h4toh5vgroup.c:1938:18: warning: variable 'vgroup_id' is uninitialized when used here [-Wuninitialized]
458:info:build   if(Vgetnamelen(vgroup_id,&vgroupnamelen) == FAIL) {
459:info:build                  ^~~~~~~~~
460:info:build h4toh5image.c:2066:14h4toh5vgroup.c:1921:19: warning: if statement has empty body [-Wempty-body]
461:info:build : note: initialize the variable 'vgroup_id' to silence this warning
462:info:build   if(!found) ;
463:info:build              ^
464:info:build   int32  vgroup_id; /* vgroup id */
465:info:build                   ^
466:info:build                    = 0
467:info:build h4toh5image.c:2066:14: note: put the semicolon on a separate line to silence this warning
468:info:build make[2]: *** [h4toh5anno.o] Error 1
469:info:build make[2]: *** Waiting for unfinished jobs....
470:info:build h4toh5util.c:2837:6: warning: comparison of array 'sdsname' not equal to a null pointer is always true [-Wtautological-pointer-compare]
471:info:build   if(sdsname != NULL) {
472:info:build      ^~~~~~~    ~~~~
473:info:build h4toh5util.c:2848:6: warning: comparison of array 'sdsname' not equal to a null pointer is always true [-Wtautological-pointer-compare]
474:info:build   if(sdsname != NULL){
475:info:build      ^~~~~~~    ~~~~
476:info:build h4toh5util.c:2873:7: warning: comparison of array 'sdsname' equal to a null pointer is always false [-Wtautological-pointer-compare]
477:info:build   if (sdsname == NULL || check_sdsname !=0){
478:info:build       ^~~~~~~    ~~~~
479:info:build h4toh5util.c:2980:6: warning: comparison of array 'imagename' not equal to a null pointer is always true [-Wtautological-pointer-compare]
480:info:build   if(imagename != NULL) {
481:info:build      ^~~~~~~~~    ~~~~
482:info:build h4toh5util.c:2991:6: warning: comparison of array 'imagename' not equal to a null pointer is always true [-Wtautological-pointer-compare]
483:info:build   if(imagename != NULL){
484:info:build      ^~~~~~~~~    ~~~~
485:info:build h4toh5util.c:3016:7: warning: comparison of array 'imagename' equal to a null pointer is always false [-Wtautological-pointer-compare]
486:info:build   if (imagename == NULL || check_imagename !=0){
487:info:build       ^~~~~~~~~    ~~~~
488:info:build 15 warnings generated.
489:info:build h4toh5util.c:3111:6: warning: comparison of array 'vdataname' not equal to a null pointer is always true [-Wtautological-pointer-compare]
490:info:build   if(vdataname != NULL) {
491:info:build      ^~~~~~~~~    ~~~~
492:info:build h4toh5util.c:3122:6: warning: comparison of array 'vdataname' not equal to a null pointer is always true [-Wtautological-pointer-compare]
493:info:build   if(vdataname != NULL){
494:info:build      ^~~~~~~~~    ~~~~
495:info:build h4toh5util.c:3147:7: warning: comparison of array 'vdataname' equal to a null pointer is always false [-Wtautological-pointer-compare]
496:info:build   if (vdataname == NULL || check_vdataname !=0){
497:info:build       ^~~~~~~~~    ~~~~
498:info:build h4toh5sds.c:5807:48: warning: if statement has empty body [-Wempty-body]
499:info:build     if(SDgetfillvalue(sds_id,fill_value)==FAIL);
500:info:build                                                ^
501:info:build h4toh5sds.c:5807:48: note: put the semicolon on a separate line to silence this warning
502:info:build h4toh5sds.c:6654:14: warning: if statement has empty body [-Wempty-body]
503:info:build   if(!found) ;
504:info:build              ^
505:info:build h4toh5sds.c:6654:14: note: put the semicolon on a separate line to silence this warning
506:info:build h4toh5sds.c:1327:12: warning: unused function 'eos_get_converted_hdf5dataset' [-Wunused-function]
507:info:build static int eos_get_converted_hdf5dataset(hid_t h4toh5id, const char *h5groupname, const char *h5dsetname, const char *sdsname, int32 sdsref, hid_t *did, hobj_ref_t *dsref)
508:info:build            ^
509:info:build 4 warnings generated.
510:info:build 5 warnings generated.
511:info:build 5 warnings generated.
512:info:build 5 warnings generated.
513:info:build 13 warnings generated.
514:info:build 10 warnings generated.
515:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_h4h5tools/h4h5tools/work/h4h5tools-2.2.1/lib/src'
516:info:build make[1]: *** [all-recursive] Error 1
517:info:build make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_h4h5tools/h4h5tools/work/h4h5tools-2.2.1/lib'
518:info:build make: *** [all-recursive] Error 1
519:info:build make: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_h4h5tools/h4h5tools/work/h4h5tools-2.2.1'
520:info:build Command failed:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_h4h5tools/h4h5tools/work/h4h5tools-2.2.1" && /usr/bin/make -j8 -w all
521:info:build Exit code: 2
522:error:build org.macports.build for port h4h5tools returned: command execution failed
523:debug:build Error code: CHILDSTATUS 37665 2
524:debug:build Backtrace: command execution failed
525    while executing
526"system -nice 0 $fullcmdstring"
527    ("eval" body line 1)
528    invoked from within
529"eval system $notty $nice \$fullcmdstring"
530    invoked from within
531"command_exec build"
532    (procedure "portbuild::build_main" line 8)
533    invoked from within
534"portbuild::build_main org.macports.build"
535    ("eval" body line 1)
536    invoked from within
537"eval $procedure $targetname"
538:info:build Warning: targets not executed for h4h5tools: org.macports.install org.macports.build org.macports.destroot
539:notice:build Please see the log file for port h4h5tools for details:
540    /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_h4h5tools/h4h5tools/main.log