source: trunk/dports/math/prc/Portfile

Last change on this file was 100324, checked in by ryandesign@…, 5 years ago

prc: new port, version 1.5.6 (#37182)

  • Property svn:eol-style set to native
  • Property svn:keywords set to Id
File size: 2.0 KB
Line 
1# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4
2# $Id: Portfile 100324 2012-12-08 10:39:19Z ryandesign@macports.org $
3
4PortSystem          1.0
5
6name                prc
7version             1.5.6
8categories          math science
9platforms           darwin
10maintainers         ryandesign openmaintainer
11license             GPL-2+
12
13description         program for aligning and scoring two profile hidden \
14                    Markov models
15
16long_description    PRC is a stand-alone program for aligning and scoring two \
17                    profile hidden Markov models. This can be used to detect \
18                    remote relationships between profiles more effectively \
19                    than by doing simple profile-sequence comparisons. \
20                    PRC takes into account all transition and emission \
21                    probabilities in both hidden Markov models. \
22                    PRC can read SAM, HMMER, PSI-BLAST and FASTA files.
23
24homepage            http://supfam.mrc-lmb.cam.ac.uk/PRC/
25master_sites        ${homepage}programs/PRC-${version}
26
27extract.suffix      .tgz
28distfiles           ${name}-${version}-src${extract.suffix}
29
30checksums           rmd160  1a79a72cf7329a6cb4433d2cf67c4ce123f1b605 \
31                    sha256  2ad9dcd0621a7262b5754426a62cd630dfbf14b04481fde116fa169d89249394
32
33patchfiles          patch-configure.diff \
34                    patch-Makefile.in.diff
35
36destroot {
37    xinstall -W ${worksrcpath} \
38        convert_to_prc \
39        merge_aligns.pl \
40        prc \
41        ${destroot}${prefix}/bin
42   
43    set docdir ${prefix}/share/doc/${name}
44    xinstall -d ${destroot}${docdir}
45    xinstall -W ${worksrcpath} -m 644 \
46        COPYING \
47        LICENSE \
48        README \
49        ${destroot}${docdir}
50   
51    xinstall -d ${destroot}${prefix}/share/examples
52    copy ${worksrcpath}/example ${destroot}${prefix}/share/examples/${name}
53}
54
55livecheck.type      regex
56livecheck.url       ${homepage}programs/
57livecheck.regex     PRC-(\[0-9.\]+)/
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