source: trunk/dports/science/cufflinks/Portfile

Last change on this file was 73989, checked in by ryandesign@…, 7 years ago

cufflinks: update to 0.9.3; see #27527

  • Property svn:eol-style set to native
  • Property svn:keywords set to Id
File size: 1.5 KB
Line 
1# $Id: Portfile 73989 2010-12-01 19:01:59Z ryandesign@macports.org $
2
3PortSystem          1.0
4
5name                cufflinks
6version             0.9.3
7categories          science biology
8platforms           darwin
9maintainers         gmail.com:haroldpimentel
10license             Boost
11
12description         Cufflinks assembles transcripts, estimates their abundances,\
13                    and tests for differential expression and regulation in RNA-Seq samples.
14
15long_description    Cufflinks assembles transcripts, estimates their abundances, \
16                    and tests for differential expression and regulation in RNA-Seq \
17                    samples. It accepts aligned RNA-Seq reads and assembles the \
18                    alignments into a parsimonious set of transcripts. \
19                    Cufflinks then estimates the relative abundances of these \
20                    transcripts based on how many reads support each one.
21
22homepage            http://cufflinks.cbcb.umd.edu/
23master_sites        ${homepage}downloads
24
25checksums           sha1        f6c28d8f98569f8d1eae72ff050ce7d2d06bfba4\
26                    rmd160      b9b3b8ec322e79e0e6f2b4b2f23de27b58ec44f4
27
28depends_lib         port:zlib \
29                    port:samtools \
30                    port:boost
31
32# samtools is not universal
33universal_variant   no
34
35post-destroot {
36    xinstall -d ${destroot}${prefix}/share/doc/${name}
37    xinstall -m 644 -W ${worksrcpath} \
38        AUTHORS \
39        LICENSE \
40        README \
41        ${destroot}${prefix}/share/doc/${name}
42}
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