# $Id: Portfile 50984 2009-05-14 21:08:43Z and.damore@macports.org $

PortSystem 1.0
PortGroup perl5 1.0
perl5.setup   eval 2.2.5
categories    perl biology
maintainers		cse.wustl.edu:rpz
description		Perl module for parameter estimation with hidden Markov models.
long_description iPE is parameter estimation software for generalized hidden Markov models. \
                 For information and documentation, see http://genes.cse.wustl.edu.

homepage          http://mblab.wustl.edu
master_sites      http://mblab.wustl.edu/software/download/

configure {}
build {}
test {}

destroot.cmd {} 
destroot {
  set installvendorlib [perl5.extract_config installvendorlib]
  file mkdir ${destroot}${installvendorlib}
  xinstall -m 0644 -W ${worksrcpath} Eval.pm GTF.pm ${destroot}${installvendorlib}
  xinstall -m 0755 -W ${worksrcpath} combine_eval_reports.pl eval.pl evaluate_gtf.pl filter_badlist.pl filter_gtfs.pl get_distribution.pl get_general_stats.pl get_overlap_stats.pl gff3_to_gtf.pl graph_gtfs.pl make_intron_lenght_vs_performance_graph.pl validate_gtf.pl validate_splice_sites.pl ${destroot}${prefix}/bin
}


platforms		darwin

checksums		md5 b113a04814cdc6fbf2824a5ca6e3a7c9

depends_lib-append	port:p5-xml-checker port:p5-xml-libxml