version:1 :debug:main Found Dependency: path: /usr/bin filename: svn regex: ^svn$ :debug:main epoch: in tree: 2 installed: 2 :debug:main python27 2.7.8_3 exists in the ports tree :debug:main python27 2.7.8_3 is the latest installed :debug:main python27 2.7.8_3 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/lang/python27 :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main universal variant already exists, so not adding the default one :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! python27 2.7.8_3 >= python27 2.7.8_3 :debug:main epoch: in tree: 2 installed: 2 :debug:main gettext 0.19.3_1 exists in the ports tree :debug:main gettext 0.19.3_1 is the latest installed :debug:main gettext 0.19.3_1 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/gettext :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl :debug:main compiler clang 600.0.54 not blacklisted because it doesn't match {clang < 211.10.1} :debug:main universal variant already exists, so not adding the default one :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! gettext 0.19.3_1 >= gettext 0.19.3_1 :debug:main epoch: in tree: 0 installed: 0 :debug:main expat 2.1.0_0 exists in the ports tree :debug:main expat 2.1.0_0 is the latest installed :debug:main expat 2.1.0_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/textproc/expat :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! expat 2.1.0_0 >= expat 2.1.0_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main libiconv 1.14_0 exists in the ports tree :debug:main libiconv 1.14_0 is the latest installed :debug:main libiconv 1.14_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/textproc/libiconv :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl :debug:main universal variant already exists, so not adding the default one :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! libiconv 1.14_0 >= libiconv 1.14_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main ncurses 5.9_2 exists in the ports tree :debug:main ncurses 5.9_2 is the latest installed :debug:main ncurses 5.9_2 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/ncurses :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! ncurses 5.9_2 >= ncurses 5.9_2 :debug:main epoch: in tree: 0 installed: 0 :debug:main zlib 1.2.8_0 exists in the ports tree :debug:main zlib 1.2.8_0 is the latest installed :debug:main zlib 1.2.8_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/archivers/zlib :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main Sourcing PortGroup xcodeversion 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/xcodeversion-1.0.tcl :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! zlib 1.2.8_0 >= zlib 1.2.8_0 :debug:main epoch: in tree: 1 installed: 1 :debug:main openssl 1.0.1j_0 exists in the ports tree :debug:main openssl 1.0.1j_0 is the latest installed :debug:main openssl 1.0.1j_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/openssl :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl :debug:main universal variant already exists, so not adding the default one :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! openssl 1.0.1j_0 >= openssl 1.0.1j_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main sqlite3 3.8.7.3_0 exists in the ports tree :debug:main sqlite3 3.8.7.3_0 is the latest installed :debug:main sqlite3 3.8.7.3_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/databases/sqlite3 :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! sqlite3 3.8.7.3_0 >= sqlite3 3.8.7.3_0 :debug:main epoch: in tree: 20090923 installed: 20090923 :debug:main libedit 20140620-3.1_0 exists in the ports tree :debug:main libedit 20140620-3.1_0 is the latest installed :debug:main libedit 20140620-3.1_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/libedit :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl :debug:main universal variant already exists, so not adding the default one :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! libedit 20140620-3.1_0 >= libedit 20140620-3.1_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main db48 4.8.30_4 exists in the ports tree :debug:main db48 4.8.30_4 is the latest installed :debug:main db48 4.8.30_4 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/databases/db48 :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl :debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl :debug:main universal variant already exists, so not adding the default one :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! db48 4.8.30_4 >= db48 4.8.30_4 :debug:main epoch: in tree: 0 installed: 0 :debug:main db_select 0.1_2 exists in the ports tree :debug:main db_select 0.1_2 is the latest installed :debug:main db_select 0.1_2 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/sysutils/db_select :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl :debug:main universal_variant is false, so not adding the default universal variant :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! db_select 0.1_2 >= db_select 0.1_2 :debug:main epoch: in tree: 0 installed: 0 :debug:main bzip2 1.0.6_0 exists in the ports tree :debug:main bzip2 1.0.6_0 is the latest installed :debug:main bzip2 1.0.6_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/archivers/bzip2 :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main universal variant already exists, so not adding the default one :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! bzip2 1.0.6_0 >= bzip2 1.0.6_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main python_select 0.3_4 exists in the ports tree :debug:main python_select 0.3_4 is the latest installed :debug:main python_select 0.3_4 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/sysutils/python_select :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl :debug:main universal_variant is false, so not adding the default universal variant :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! python_select 0.3_4 >= python_select 0.3_4 :debug:main epoch: in tree: 0 installed: 0 :debug:main freeglut 2.8.1_0 exists in the ports tree :debug:main freeglut 2.8.1_0 is the latest installed :debug:main freeglut 2.8.1_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/freeglut :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! freeglut 2.8.1_0 >= freeglut 2.8.1_0 :debug:main epoch: in tree: 1 installed: 1 :debug:main mesa 8.0.5_3 exists in the ports tree :debug:main mesa 8.0.5_3 +python27 is the latest installed :debug:main mesa 8.0.5_3 +python27 is active :debug:main Merging existing variants '+python27' into variants :debug:main new fully merged portvariants: python27 + :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/mesa :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main universal variant already exists, so not adding the default one :debug:main Executing variant python27 provides python27 :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! mesa 8.0.5_3 >= mesa 8.0.5_3 :debug:main epoch: in tree: 0 installed: 0 :debug:main xorg-glproto 1.4.17_0 exists in the ports tree :debug:main xorg-glproto 1.4.17_0 is the latest installed :debug:main xorg-glproto 1.4.17_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-glproto :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main only one arch supported, so not adding the default universal variant :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! xorg-glproto 1.4.17_0 >= xorg-glproto 1.4.17_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main xorg-dri2proto 2.8_0 exists in the ports tree :debug:main xorg-dri2proto 2.8_0 is the latest installed :debug:main xorg-dri2proto 2.8_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-dri2proto :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main only one arch supported, so not adding the default universal variant :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! xorg-dri2proto 2.8_0 >= xorg-dri2proto 2.8_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main xorg-libXfixes 5.0.1_0 exists in the ports tree :debug:main xorg-libXfixes 5.0.1_0 is the latest installed :debug:main xorg-libXfixes 5.0.1_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libXfixes :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! xorg-libXfixes 5.0.1_0 >= xorg-libXfixes 5.0.1_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main xorg-libX11 1.6.2_0 exists in the ports tree :debug:main xorg-libX11 1.6.2_0 is the latest installed :debug:main xorg-libX11 1.6.2_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libX11 :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! xorg-libX11 1.6.2_0 >= xorg-libX11 1.6.2_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main xorg-libXdmcp 1.1.1_0 exists in the ports tree :debug:main xorg-libXdmcp 1.1.1_0 is the latest installed :debug:main xorg-libXdmcp 1.1.1_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libXdmcp :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! xorg-libXdmcp 1.1.1_0 >= xorg-libXdmcp 1.1.1_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main xorg-libXau 1.0.8_0 exists in the ports tree :debug:main xorg-libXau 1.0.8_0 is the latest installed :debug:main xorg-libXau 1.0.8_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libXau :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! xorg-libXau 1.0.8_0 >= xorg-libXau 1.0.8_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main xorg-xproto 7.0.26_0 exists in the ports tree :debug:main xorg-xproto 7.0.26_0 is the latest installed :debug:main xorg-xproto 7.0.26_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-xproto :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main only one arch supported, so not adding the default universal variant :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! xorg-xproto 7.0.26_0 >= xorg-xproto 7.0.26_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main xorg-libxcb 1.11_0 exists in the ports tree :debug:main xorg-libxcb 1.11_0 +python27 is the latest installed :debug:main xorg-libxcb 1.11_0 +python27 is active :debug:main Merging existing variants '+python27' into variants :debug:main new fully merged portvariants: python27 + :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libxcb :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Executing variant python27 provides python27 :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! xorg-libxcb 1.11_0 >= xorg-libxcb 1.11_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main xorg-xcb-proto 1.11_0 exists in the ports tree :debug:main xorg-xcb-proto 1.11_0 +python27 is the latest installed :debug:main xorg-xcb-proto 1.11_0 +python27 is active :debug:main Merging existing variants '+python27' into variants :debug:main new fully merged portvariants: python27 + :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-xcb-proto :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main only one arch supported, so not adding the default universal variant :debug:main Executing variant python27 provides python27 :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! xorg-xcb-proto 1.11_0 >= xorg-xcb-proto 1.11_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main libxml2 2.9.2_1 exists in the ports tree :debug:main libxml2 2.9.2_1 is the latest installed :debug:main libxml2 2.9.2_1 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/textproc/libxml2 :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! libxml2 2.9.2_1 >= libxml2 2.9.2_1 :debug:main epoch: in tree: 0 installed: 0 :debug:main xz 5.0.7_0 exists in the ports tree :debug:main xz 5.0.7_0 is the latest installed :debug:main xz 5.0.7_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/archivers/xz :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! xz 5.0.7_0 >= xz 5.0.7_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main xorg-libpthread-stubs 0.3_0 exists in the ports tree :debug:main xorg-libpthread-stubs 0.3_0 is the latest installed :debug:main xorg-libpthread-stubs 0.3_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libpthread-stubs :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main only one arch supported, so not adding the default universal variant :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! xorg-libpthread-stubs 0.3_0 >= xorg-libpthread-stubs 0.3_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main xorg-kbproto 1.0.6_0 exists in the ports tree :debug:main xorg-kbproto 1.0.6_0 is the latest installed :debug:main xorg-kbproto 1.0.6_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-kbproto :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main only one arch supported, so not adding the default universal variant :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! xorg-kbproto 1.0.6_0 >= xorg-kbproto 1.0.6_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main xorg-fixesproto 5.0_0 exists in the ports tree :debug:main xorg-fixesproto 5.0_0 is the latest installed :debug:main xorg-fixesproto 5.0_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-fixesproto :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main only one arch supported, so not adding the default universal variant :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! xorg-fixesproto 5.0_0 >= xorg-fixesproto 5.0_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main xorg-xextproto 7.3.0_0 exists in the ports tree :debug:main xorg-xextproto 7.3.0_0 is the latest installed :debug:main xorg-xextproto 7.3.0_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-xextproto :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main only one arch supported, so not adding the default universal variant :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! xorg-xextproto 7.3.0_0 >= xorg-xextproto 7.3.0_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main xorg-libXi 1.7.4_0 exists in the ports tree :debug:main xorg-libXi 1.7.4_0 is the latest installed :debug:main xorg-libXi 1.7.4_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libXi :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! xorg-libXi 1.7.4_0 >= xorg-libXi 1.7.4_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main xorg-libXext 1.3.3_0 exists in the ports tree :debug:main xorg-libXext 1.3.3_0 is the latest installed :debug:main xorg-libXext 1.3.3_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libXext :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! xorg-libXext 1.3.3_0 >= xorg-libXext 1.3.3_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main xorg-inputproto 2.3.1_0 exists in the ports tree :debug:main xorg-inputproto 2.3.1_0 is the latest installed :debug:main xorg-inputproto 2.3.1_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-inputproto :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main only one arch supported, so not adding the default universal variant :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! xorg-inputproto 2.3.1_0 >= xorg-inputproto 2.3.1_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main xorg-libXmu 1.1.2_0 exists in the ports tree :debug:main xorg-libXmu 1.1.2_0 is the latest installed :debug:main xorg-libXmu 1.1.2_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libXmu :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! xorg-libXmu 1.1.2_0 >= xorg-libXmu 1.1.2_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main xorg-libXt 1.1.4_0 exists in the ports tree :debug:main xorg-libXt 1.1.4_0 is the latest installed :debug:main xorg-libXt 1.1.4_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libXt :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! xorg-libXt 1.1.4_0 >= xorg-libXt 1.1.4_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main xorg-libsm 1.2.1_0 exists in the ports tree :debug:main xorg-libsm 1.2.1_0 is the latest installed :debug:main xorg-libsm 1.2.1_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libsm :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! xorg-libsm 1.2.1_0 >= xorg-libsm 1.2.1_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main xorg-libice 1.0.8_0 exists in the ports tree :debug:main xorg-libice 1.0.8_0 is the latest installed :debug:main xorg-libice 1.0.8_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libice :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! xorg-libice 1.0.8_0 >= xorg-libice 1.0.8_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main xorg-libXrandr 1.4.2_0 exists in the ports tree :debug:main xorg-libXrandr 1.4.2_0 is the latest installed :debug:main xorg-libXrandr 1.4.2_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libXrandr :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! xorg-libXrandr 1.4.2_0 >= xorg-libXrandr 1.4.2_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main xrender 0.9.8_0 exists in the ports tree :debug:main xrender 0.9.8_0 is the latest installed :debug:main xrender 0.9.8_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xrender :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! xrender 0.9.8_0 >= xrender 0.9.8_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main xorg-renderproto 0.11.1_0 exists in the ports tree :debug:main xorg-renderproto 0.11.1_0 is the latest installed :debug:main xorg-renderproto 0.11.1_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-renderproto :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main only one arch supported, so not adding the default universal variant :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! xorg-renderproto 0.11.1_0 >= xorg-renderproto 0.11.1_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main xorg-randrproto 1.4.0_0 exists in the ports tree :debug:main xorg-randrproto 1.4.0_0 is the latest installed :debug:main xorg-randrproto 1.4.0_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-randrproto :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main only one arch supported, so not adding the default universal variant :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! xorg-randrproto 1.4.0_0 >= xorg-randrproto 1.4.0_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main xorg-libXxf86vm 1.1.3_1 exists in the ports tree :debug:main xorg-libXxf86vm 1.1.3_1 is the latest installed :debug:main xorg-libXxf86vm 1.1.3_1 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libXxf86vm :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! xorg-libXxf86vm 1.1.3_1 >= xorg-libXxf86vm 1.1.3_1 :debug:main epoch: in tree: 0 installed: 0 :debug:main xorg-xf86vidmodeproto 2.3.1_0 exists in the ports tree :debug:main xorg-xf86vidmodeproto 2.3.1_0 is the latest installed :debug:main xorg-xf86vidmodeproto 2.3.1_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-xf86vidmodeproto :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main only one arch supported, so not adding the default universal variant :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! xorg-xf86vidmodeproto 2.3.1_0 >= xorg-xf86vidmodeproto 2.3.1_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main freetype 2.5.3_1 exists in the ports tree :debug:main freetype 2.5.3_1 is the latest installed :debug:main freetype 2.5.3_1 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/print/freetype :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl :debug:main universal variant already exists, so not adding the default one :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! freetype 2.5.3_1 >= freetype 2.5.3_1 :debug:main epoch: in tree: 0 installed: 0 :debug:main libpng 1.6.15_0 exists in the ports tree :debug:main libpng 1.6.15_0 is the latest installed :debug:main libpng 1.6.15_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/graphics/libpng :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! libpng 1.6.15_0 >= libpng 1.6.15_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main glew 1.11.0_0 exists in the ports tree :debug:main glew 1.11.0_0 is the latest installed :debug:main glew 1.11.0_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/graphics/glew :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main universal variant already exists, so not adding the default one :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! glew 1.11.0_0 >= glew 1.11.0_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main py27-numpy 1.9.1_0 exists in the ports tree :debug:main py27-numpy 1.9.1_0 is the latest installed :debug:main py27-numpy 1.9.1_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/python/py-numpy :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main Re-registering default for build.cmd :debug:main Re-registering default for destroot.cmd :debug:main Re-registering default for destroot.destdir :debug:main Sourcing PortGroup python 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/python-1.0.tcl :debug:main Sourcing PortGroup github 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/github-1.0.tcl :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! py27-numpy 1.9.1_0 >= py27-numpy 1.9.1_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main fftw-3 3.3.4_1 exists in the ports tree :debug:main fftw-3 3.3.4_1 is the latest installed :debug:main fftw-3 3.3.4_1 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/math/fftw-3 :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl :debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl :debug:main Sourcing PortGroup active_variants 1.1 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/active_variants-1.1.tcl :debug:main Sourcing PortGroup compilers 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/compilers-1.0.tcl :debug:main Sourcing PortGroup mpi 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/mpi-1.0.tcl :debug:main compiler clang 600.0.54 not blacklisted because it doesn't match {clang <= 211.10.1} :debug:main universal variant already exists, so not adding the default one :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! fftw-3 3.3.4_1 >= fftw-3 3.3.4_1 :debug:main epoch: in tree: 0 installed: 0 :debug:main py27-nose 1.3.1_0 exists in the ports tree :debug:main py27-nose 1.3.1_0 is the latest installed :debug:main py27-nose 1.3.1_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/python/py-nose :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main Re-registering default for build.cmd :debug:main Re-registering default for destroot.cmd :debug:main Re-registering default for destroot.destdir :debug:main Sourcing PortGroup python 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/python-1.0.tcl :debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl :debug:main only one arch supported, so not adding the default universal variant :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! py27-nose 1.3.1_0 >= py27-nose 1.3.1_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main py27-setuptools 7.0_0 exists in the ports tree :debug:main py27-setuptools 7.0_0 is the latest installed :debug:main py27-setuptools 7.0_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/python/py-setuptools :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main Re-registering default for build.cmd :debug:main Re-registering default for destroot.cmd :debug:main Re-registering default for destroot.destdir :debug:main Sourcing PortGroup python 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/python-1.0.tcl :debug:main only one arch supported, so not adding the default universal variant :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! py27-setuptools 7.0_0 >= py27-setuptools 7.0_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main nosetests_select 0.1_0 exists in the ports tree :debug:main nosetests_select 0.1_0 is the latest installed :debug:main nosetests_select 0.1_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/python/nosetests_select :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl :debug:main universal_variant is false, so not adding the default universal variant :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! nosetests_select 0.1_0 >= nosetests_select 0.1_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main py27-cython 0.21.1_0 exists in the ports tree :debug:main py27-cython 0.21.1_0 is the latest installed :debug:main py27-cython 0.21.1_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/python/py-cython :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main Re-registering default for build.cmd :debug:main Re-registering default for destroot.cmd :debug:main Re-registering default for destroot.destdir :debug:main Sourcing PortGroup python 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/python-1.0.tcl :debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! py27-cython 0.21.1_0 >= py27-cython 0.21.1_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main cython_select 0.1_0 exists in the ports tree :debug:main cython_select 0.1_0 is the latest installed :debug:main cython_select 0.1_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/python/cython_select :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl :debug:main universal_variant is false, so not adding the default universal variant :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! cython_select 0.1_0 >= cython_select 0.1_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main py27-pmw 1.3.3a_0 exists in the ports tree :debug:main py27-pmw 1.3.3a_0 is the latest installed :debug:main py27-pmw 1.3.3a_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/python/py-pmw :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main Re-registering default for build.cmd :debug:main Re-registering default for destroot.cmd :debug:main Re-registering default for destroot.destdir :debug:main Sourcing PortGroup python 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/python-1.0.tcl :debug:main only one arch supported, so not adding the default universal variant :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! py27-pmw 1.3.3a_0 >= py27-pmw 1.3.3a_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main py27-tkinter 2.7.8_2 exists in the ports tree :debug:main py27-tkinter 2.7.8_2 is the latest installed :debug:main py27-tkinter 2.7.8_2 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/python/py-tkinter :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main Re-registering default for build.cmd :debug:main Re-registering default for destroot.cmd :debug:main Re-registering default for destroot.destdir :debug:main Sourcing PortGroup python 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/python-1.0.tcl :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! py27-tkinter 2.7.8_2 >= py27-tkinter 2.7.8_2 :debug:main epoch: in tree: 0 installed: 0 :debug:main tk 8.6.1_2 exists in the ports tree :debug:main tk 8.6.1_2 +quartz is the latest installed :debug:main tk 8.6.1_2 +quartz is active :debug:main Merging existing variants '+quartz' into variants :debug:main new fully merged portvariants: quartz + :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/tk :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main adding the default universal variant :debug:main Executing variant quartz provides quartz :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! tk 8.6.1_2 >= tk 8.6.1_2 :debug:main epoch: in tree: 0 installed: 0 :debug:main tcl 8.6.1_0 exists in the ports tree :debug:main tcl 8.6.1_0 +corefoundation+threads is the latest installed :debug:main tcl 8.6.1_0 +corefoundation+threads is active :debug:main Merging existing variants '+corefoundation+threads' into variants :debug:main new fully merged portvariants: corefoundation + threads + :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/lang/tcl :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Executing variant threads provides threads :debug:main Executing variant corefoundation provides corefoundation :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! tcl 8.6.1_0 >= tcl 8.6.1_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main py27-scipy 0.14.0_0 exists in the ports tree :debug:main py27-scipy 0.14.0_0 +gcc48 is the latest installed :debug:main py27-scipy 0.14.0_0 +gcc48 is active :debug:main Merging existing variants '+gcc48' into variants :debug:main new fully merged portvariants: gcc48 + :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/python/py-scipy :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main Re-registering default for build.cmd :debug:main Re-registering default for destroot.cmd :debug:main Re-registering default for destroot.destdir :debug:main Sourcing PortGroup python 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/python-1.0.tcl :debug:main Sourcing PortGroup active_variants 1.1 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/active_variants-1.1.tcl :debug:main universal_variant is false, so not adding the default universal variant :debug:main Executing variant gcc48 provides gcc48 :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! py27-scipy 0.14.0_0 >= py27-scipy 0.14.0_0 :debug:main epoch: in tree: 20120107 installed: 20120107 :debug:main SuiteSparse 4.2.1_3 exists in the ports tree :debug:main SuiteSparse 4.2.1_3 is the latest installed :debug:main SuiteSparse 4.2.1_3 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/math/SuiteSparse :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main Sourcing PortGroup active_variants 1.1 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/active_variants-1.1.tcl :debug:main Sourcing PortGroup compilers 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/compilers-1.0.tcl :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! SuiteSparse 4.2.1_3 >= SuiteSparse 4.2.1_3 :debug:main epoch: in tree: 0 installed: 0 :debug:main swig-python 3.0.2_0 exists in the ports tree :debug:main swig-python 3.0.2_0 is the latest installed :debug:main swig-python 3.0.2_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/swig :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! swig-python 3.0.2_0 >= swig-python 3.0.2_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main swig 3.0.2_0 exists in the ports tree :debug:main swig 3.0.2_0 is the latest installed :debug:main swig 3.0.2_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/swig :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! swig 3.0.2_0 >= swig 3.0.2_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main pcre 8.36_0 exists in the ports tree :debug:main pcre 8.36_0 is the latest installed :debug:main pcre 8.36_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/pcre :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! pcre 8.36_0 >= pcre 8.36_0 :debug:main epoch: in tree: 2 installed: 2 :debug:main libgcc 4.9.2_1 exists in the ports tree :debug:main libgcc 4.9.2_1 is the latest installed :debug:main libgcc 4.9.2_1 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/lang/gcc49 :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl :debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl :debug:main compiler llvm-gcc-4.2 blacklisted because it's not installed or it doesn't work :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main universal variant already exists, so not adding the default one :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! libgcc 4.9.2_1 >= libgcc 4.9.2_1 :debug:main epoch: in tree: 0 installed: 0 :debug:main cctools 855_1 exists in the ports tree :debug:main cctools 855_1 +llvm35 is the latest installed :debug:main cctools 855_1 +llvm35 is active :debug:main Merging existing variants '+llvm35' into variants :debug:main new fully merged portvariants: llvm35 + :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/cctools :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main universal variant already exists, so not adding the default one :debug:main Executing variant llvm35 provides llvm35 :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! cctools 855_1 >= cctools 855_1 :debug:main epoch: in tree: 0 installed: 0 :debug:main cctools-headers 855_0 exists in the ports tree :debug:main cctools-headers 855_0 is the latest installed :debug:main cctools-headers 855_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/cctools-headers :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main universal_variant is false, so not adding the default universal variant :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! cctools-headers 855_0 >= cctools-headers 855_0 :debug:main epoch: in tree: 1 installed: 1 :debug:main llvm-3.5 3.5.0_0 exists in the ports tree :debug:main llvm-3.5 3.5.0_0 +assertions is the latest installed :debug:main llvm-3.5 3.5.0_0 +assertions is active :debug:main Merging existing variants '+assertions' into variants :debug:main new fully merged portvariants: assertions + :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/lang/llvm-3.5 :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl :debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl :debug:main compiler clang 600.0.54 not blacklisted because it doesn't match {clang < 425.0.24} :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main universal variant already exists, so not adding the default one :debug:main Executing variant assertions provides assertions :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! llvm-3.5 3.5.0_0 >= llvm-3.5 3.5.0_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main libffi 3.2.1_0 exists in the ports tree :debug:main libffi 3.2.1_0 is the latest installed :debug:main libffi 3.2.1_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/libffi :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl :debug:main universal variant already exists, so not adding the default one :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! libffi 3.2.1_0 >= libffi 3.2.1_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main libcxx 183506_1 exists in the ports tree :debug:main libcxx 183506_1 is the latest installed :debug:main libcxx 183506_1 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/lang/libcxx :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main universal variant already exists, so not adding the default one :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! libcxx 183506_1 >= libcxx 183506_1 :debug:main epoch: in tree: 0 installed: 0 :debug:main perl5 5.12.4_0 exists in the ports tree :debug:main perl5 5.12.4_0 +perl5_16 is the latest installed :debug:main perl5 5.12.4_0 +perl5_16 is active :debug:main Merging existing variants '+perl5_16' into variants :debug:main new fully merged portvariants: perl5_16 + :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/lang/perl5 :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main universal_variant is false, so not adding the default universal variant :debug:main Executing variant perl5_16 provides perl5_16 :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! perl5 5.12.4_0 >= perl5 5.12.4_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main perl5.16 5.16.3_0 exists in the ports tree :debug:main perl5.16 5.16.3_0 is the latest installed :debug:main perl5.16 5.16.3_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/lang/perl5.16 :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! perl5.16 5.16.3_0 >= perl5.16 5.16.3_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main gdbm 1.11_1 exists in the ports tree :debug:main gdbm 1.11_1 is the latest installed :debug:main gdbm 1.11_1 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/databases/gdbm :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! gdbm 1.11_1 >= gdbm 1.11_1 :debug:main epoch: in tree: 0 installed: 0 :debug:main llvm_select 1.0_0 exists in the ports tree :debug:main llvm_select 1.0_0 is the latest installed :debug:main llvm_select 1.0_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/sysutils/llvm_select :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl :debug:main universal_variant is false, so not adding the default universal variant :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! llvm_select 1.0_0 >= llvm_select 1.0_0 :debug:main epoch: in tree: 1 installed: 1 :debug:main cloog 0.18.2_2 exists in the ports tree :debug:main cloog 0.18.2_2 is the latest installed :debug:main cloog 0.18.2_2 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/cloog :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl :debug:main universal variant already exists, so not adding the default one :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! cloog 0.18.2_2 >= cloog 0.18.2_2 :debug:main epoch: in tree: 0 installed: 0 :debug:main gmp 6.0.0_1 exists in the ports tree :debug:main gmp 6.0.0_1 is the latest installed :debug:main gmp 6.0.0_1 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/gmp :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl :debug:main universal variant already exists, so not adding the default one :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! gmp 6.0.0_1 >= gmp 6.0.0_1 :debug:main epoch: in tree: 2 installed: 2 :debug:main isl 0.14_2 exists in the ports tree :debug:main isl 0.14_2 is the latest installed :debug:main isl 0.14_2 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/isl :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl :debug:main universal variant already exists, so not adding the default one :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! isl 0.14_2 >= isl 0.14_2 :debug:main epoch: in tree: 1 installed: 1 :debug:main ld64 236.3_1 exists in the ports tree :debug:main ld64 236.3_1 +llvm35 is the latest installed :debug:main ld64 236.3_1 +llvm35 is active :debug:main Merging existing variants '+llvm35' into variants :debug:main new fully merged portvariants: llvm35 + :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/ld64 :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main universal variant already exists, so not adding the default one :debug:main Executing variant llvm35 provides llvm35 :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! ld64 236.3_1 >= ld64 236.3_1 :debug:main epoch: in tree: 0 installed: 0 :debug:main libmpc 1.0.2_1 exists in the ports tree :debug:main libmpc 1.0.2_1 is the latest installed :debug:main libmpc 1.0.2_1 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/libmpc :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! libmpc 1.0.2_1 >= libmpc 1.0.2_1 :debug:main epoch: in tree: 0 installed: 0 :debug:main mpfr 3.1.2-p10_3 exists in the ports tree :debug:main mpfr 3.1.2-p10_3 is the latest installed :debug:main mpfr 3.1.2-p10_3 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/devel/mpfr :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl :debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl :debug:main compiler clang 600.0.54 not blacklisted because it doesn't match {clang == 211.10.1} :debug:main universal variant already exists, so not adding the default one :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! mpfr 3.1.2-p10_3 >= mpfr 3.1.2-p10_3 :debug:main epoch: in tree: 0 installed: 0 :debug:main gcc_select 0.1_8 exists in the ports tree :debug:main gcc_select 0.1_8 is the latest installed :debug:main gcc_select 0.1_8 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/sysutils/gcc_select :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl :debug:main universal_variant is false, so not adding the default universal variant :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! gcc_select 0.1_8 >= gcc_select 0.1_8 :debug:main epoch: in tree: 0 installed: 0 :debug:main xdpyinfo 1.3.1_0 exists in the ports tree :debug:main xdpyinfo 1.3.1_0 is the latest installed :debug:main xdpyinfo 1.3.1_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xdpyinfo :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! xdpyinfo 1.3.1_0 >= xdpyinfo 1.3.1_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main xorg-libXinerama 1.1.3_0 exists in the ports tree :debug:main xorg-libXinerama 1.1.3_0 is the latest installed :debug:main xorg-libXinerama 1.1.3_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libXinerama :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! xorg-libXinerama 1.1.3_0 >= xorg-libXinerama 1.1.3_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main xorg-xineramaproto 1.2.1_0 exists in the ports tree :debug:main xorg-xineramaproto 1.2.1_0 is the latest installed :debug:main xorg-xineramaproto 1.2.1_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-xineramaproto :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main only one arch supported, so not adding the default universal variant :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! xorg-xineramaproto 1.2.1_0 >= xorg-xineramaproto 1.2.1_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main xorg-libXtst 1.2.2_0 exists in the ports tree :debug:main xorg-libXtst 1.2.2_0 is the latest installed :debug:main xorg-libXtst 1.2.2_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libXtst :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! xorg-libXtst 1.2.2_0 >= xorg-libXtst 1.2.2_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main xorg-recordproto 1.14.2_0 exists in the ports tree :debug:main xorg-recordproto 1.14.2_0 is the latest installed :debug:main xorg-recordproto 1.14.2_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-recordproto :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main only one arch supported, so not adding the default universal variant :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! xorg-recordproto 1.14.2_0 >= xorg-recordproto 1.14.2_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main xorg-libdmx 1.1.3_0 exists in the ports tree :debug:main xorg-libdmx 1.1.3_0 is the latest installed :debug:main xorg-libdmx 1.1.3_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-libdmx :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main adding the default universal variant :debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! xorg-libdmx 1.1.3_0 >= xorg-libdmx 1.1.3_0 :debug:main epoch: in tree: 0 installed: 0 :debug:main xorg-dmxproto 2.3.1_0 exists in the ports tree :debug:main xorg-dmxproto 2.3.1_0 is the latest installed :debug:main xorg-dmxproto 2.3.1_0 is active :debug:main Merging existing variants '' into variants :debug:main new fully merged portvariants: :debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/x11/xorg-dmxproto :debug:main OS darwin/14.0.0 (Mac OS X 10.10) arch i386 :debug:main only one arch supported, so not adding the default universal variant :debug:main Running callback portconfigure::add_automatic_compiler_dependencies :debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies :debug:main Running callback portbuild::add_automatic_buildsystem_dependencies :debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies :debug:main No need to upgrade! xorg-dmxproto 2.3.1_0 >= xorg-dmxproto 2.3.1_0 :msg:main ---> Computing dependencies for pymol:info:main .:debug:main pymol has no conflicts :debug:main Found Dependency: path: /usr/bin filename: svn regex: ^svn$ :debug:main Searching for dependency: subversion :debug:main Didn't find receipt, going to depspec regex for: subversion :debug:main Found Dependency: path: /usr/bin filename: svn regex: ^svn$ :debug:main Searching for dependency: python27 :debug:main Found Dependency: receipt exists for python27 :debug:main Searching for dependency: freeglut :debug:main Found Dependency: receipt exists for freeglut :debug:main Searching for dependency: freetype :debug:main Found Dependency: receipt exists for freetype :debug:main Searching for dependency: glew :debug:main Found Dependency: receipt exists for glew :debug:main Searching for dependency: libpng :debug:main Found Dependency: receipt exists for libpng :debug:main Searching for dependency: mesa :debug:main Found Dependency: receipt exists for mesa :debug:main Searching for dependency: py27-numpy :debug:main Found Dependency: receipt exists for py27-numpy :debug:main Searching for dependency: py27-pmw :debug:main Found Dependency: receipt exists for py27-pmw :debug:main Searching for dependency: py27-scipy :debug:main Found Dependency: receipt exists for py27-scipy :debug:main Searching for dependency: py27-tkinter :debug:main Found Dependency: receipt exists for py27-tkinter :debug:main Searching for dependency: xdpyinfo :debug:main Found Dependency: receipt exists for xdpyinfo :msg:main :debug:main Executing org.macports.main (pymol) :debug:main changing euid/egid - current euid: 0 - current egid: 0 :debug:main egid changed to: 501 :debug:main euid changed to: 502 :debug:archivefetch archivefetch phase started at Tue Dec 9 22:48:16 MSK 2014 :msg:archivefetch ---> Fetching archive for pymol :debug:archivefetch Executing proc-pre-org.macports.archivefetch-archivefetch-0 :debug:archivefetch Active variants check for archivefetch-type install considers depends_lib depends_run: python27 freeglut freetype glew libpng mesa py27-numpy py27-pmw py27-scipy py27-tkinter xdpyinfo :debug:archivefetch Ignoring active_variants requirement for tcl because archivefetch-type install only considers depends_lib depends_run and those do not contain tcl :debug:archivefetch Ignoring active_variants requirement for tk because archivefetch-type install only considers depends_lib depends_run and those do not contain tk :debug:archivefetch Executing org.macports.archivefetch (pymol) :debug:archivefetch euid/egid changed to: 0/0 :debug:archivefetch chowned /opt/local/var/macports/incoming to macports :debug:archivefetch euid/egid changed to: 502/501 :info:archivefetch ---> pymol-1.7.1.1_1.darwin_14.x86_64.tbz2 doesn't seem to exist in /opt/local/var/macports/incoming/verified :msg:archivefetch ---> Attempting to fetch pymol-1.7.1.1_1.darwin_14.x86_64.tbz2 from http://nue.de.packages.macports.org/macports/packages/pymol :debug:archivefetch Fetching archive failed:: The requested URL returned error: 404 Not Found :msg:archivefetch ---> Attempting to fetch pymol-1.7.1.1_1.darwin_14.x86_64.tbz2 from http://lil.fr.packages.macports.org/pymol :debug:archivefetch Fetching archive failed:: The requested URL returned error: 404 Not Found :msg:archivefetch ---> Attempting to fetch pymol-1.7.1.1_1.darwin_14.x86_64.tbz2 from http://packages.macports.org/pymol :debug:archivefetch Fetching archive failed:: The requested URL returned error: 404 Not Found :debug:archivefetch Privilege de-escalation not attempted as not running as root. :debug:fetch fetch phase started at Tue Dec 9 22:48:47 MSK 2014 :notice:fetch ---> Fetching distfiles for pymol :debug:fetch Can't run fetch on this port without elevated privileges. Escalating privileges back to root. :debug:fetch euid changed to: 0. egid changed to: 0. :debug:fetch changing euid/egid - current euid: 0 - current egid: 0 :debug:fetch egid changed to: 501 :debug:fetch euid changed to: 502 :debug:fetch Executing org.macports.fetch (pymol) :debug:fetch Environment: CC_PRINT_OPTIONS='YES' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/.CC_PRINT_OPTIONS' CPATH='/opt/local/include' LIBRARY_PATH='/opt/local/lib' MACOSX_DEPLOYMENT_TARGET='10.10' :debug:fetch Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work" && /usr/bin/svn --non-interactive --trust-server-cert export https://svn.code.sf.net/p/pymol/code/trunk/pymol@4074' :debug:fetch Executing command line: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work" && /usr/bin/svn --non-interactive --trust-server-cert export https://svn.code.sf.net/p/pymol/code/trunk/pymol@4074 2>&1 :info:fetch A pymol :info:fetch A pymol/test :info:fetch A pymol/test/headerTest.py :info:fetch A pymol/test/show :info:fetch A pymol/test/cyg :info:fetch A pymol/test/trim.py :info:fetch A pymol/test/run :info:fetch A pymol/test/win.py :info:fetch A pymol/test/inp :info:fetch A pymol/test/inp/B08.py :info:fetch A pymol/test/inp/C0200feedback.pml :info:fetch A pymol/test/inp/C0300session.pml :info:fetch A pymol/test/inp/M0010load.pml :info:fetch A pymol/test/inp/C0201extend.pml :info:fetch A pymol/test/inp/M0025view.pml :info:fetch A pymol/test/inp/C0740multipdb.pml :info:fetch A pymol/test/inp/C0050multi.pml :info:fetch A pymol/test/inp/L0010ccp4read.pml :info:fetch A pymol/test/inp/C1060controlling.py :info:fetch A pymol/test/inp/T02.py :info:fetch A pymol/test/inp/M0001new.pml :info:fetch A pymol/test/inp/C2000returns.py :info:fetch A pymol/test/inp/M0053session.pml :info:fetch A pymol/test/inp/C0170scene.pml :info:fetch A pymol/test/inp/C1020querying.pml :info:fetch A pymol/test/inp/M0020multi.pml :info:fetch A pymol/test/inp/C0060delete.pml :info:fetch A pymol/test/inp/C0105names.pml :info:fetch A pymol/test/inp/C1300extras.pml :info:fetch A pymol/test/inp/C0080create.pml :info:fetch A pymol/test/inp/C0150alter.pml :info:fetch A pymol/test/inp/C0800matrices.pml :info:fetch A pymol/test/inp/L0100isomisc.pml :info:fetch A pymol/test/inp/C0100select.pml :info:fetch A pymol/test/inp/B03.py :info:fetch A pymol/test/inp/C0600util.pml :info:fetch A pymol/test/inp/C1035wildcards.pml :info:fetch A pymol/test/inp/B07.py :info:fetch A pymol/test/inp/C0180embed.pml :info:fetch A pymol/test/inp/C1200matrix_maps.pml :info:fetch A pymol/test/inp/C0030pkl.pml :info:fetch A pymol/test/inp/T01.py :info:fetch A pymol/test/inp/C0021pdbstr.pml :info:fetch A pymol/test/inp/M0052session.pml :info:fetch A pymol/test/inp/L0040isomesh2.pml :info:fetch A pymol/test/inp/M0021multi.pml :info:fetch A pymol/test/inp/C0020pdb.pml :info:fetch A pymol/test/inp/L0200electro.pml :info:fetch A pymol/test/inp/C0550pseudo.pml :info:fetch A pymol/test/inp/C1090coulomb.pml :info:fetch A pymol/test/inp/L0020xplorread.pml :info:fetch A pymol/test/inp/B02.py :info:fetch A pymol/test/inp/M0041do.pml :info:fetch A pymol/test/inp/C1030selecting.pml :info:fetch A pymol/test/inp/C0027mol2.pml :info:fetch A pymol/test/inp/C0026sdf.pml :info:fetch A pymol/test/inp/B06.py :info:fetch A pymol/test/inp/C0181embed.pml :info:fetch A pymol/test/inp/C0160get.pml :info:fetch A pymol/test/inp/C1080isomore.pml :info:fetch A pymol/test/inp/C1070exporting.pml :info:fetch A pymol/test/inp/C1010helping.pml :info:fetch A pymol/test/inp/C0025mol.pml :info:fetch A pymol/test/inp/C0500misc.pml :info:fetch A pymol/test/inp/U01.pml :info:fetch A pymol/test/inp/C0140iterate.pml :info:fetch A pymol/test/inp/M0051session.pml :info:fetch A pymol/test/inp/T04.py :info:fetch A pymol/test/inp/C1100do.py :info:fetch A pymol/test/inp/C1050fitting.py :info:fetch A pymol/test/inp/C0700odd.pml :info:fetch A pymol/test/inp/C1095slice.pml :info:fetch A pymol/test/inp/B01.py :info:fetch A pymol/test/inp/B11.py :info:fetch A pymol/test/inp/C0106order.pml :info:fetch A pymol/test/inp/C0001quit.pml :info:fetch A pymol/test/inp/B05.py :info:fetch A pymol/test/inp/B09.py :info:fetch A pymol/test/inp/C1040editing.pml :info:fetch A pymol/test/inp/C0202help_python.pml :info:fetch A pymol/test/inp/C0070rep.pml :info:fetch A pymol/test/inp/M0050session.pml :info:fetch A pymol/test/inp/T03.py :info:fetch A pymol/test/inp/C0010hello.pml :info:fetch A pymol/test/inp/C1000viewing.pml :info:fetch A pymol/test/inp/M0002start.pml :info:fetch A pymol/test/inp/M0030scene.pml :info:fetch A pymol/test/inp/C1110matrix_mode.pml :info:fetch A pymol/test/inp/B10.py :info:fetch A pymol/test/inp/M0040do.pml :info:fetch A pymol/test/inp/B04.py :info:fetch A pymol/test/inp/L0030isomesh.pml :info:fetch A pymol/test/dat :info:fetch A pymol/test/dat/small03.mol2 :info:fetch A pymol/test/dat/helix_amber.pdb :info:fetch A pymol/test/dat/water.pdb :info:fetch A pymol/test/dat/tiny.pdb :info:fetch A pymol/test/dat/3al1.r3d :info:fetch A pymol/test/dat/il2.pdb :info:fetch A pymol/test/dat/pept.pkl :info:fetch A pymol/test/dat/small01.mol :info:fetch A pymol/test/dat/pept.r3d :info:fetch A pymol/test/dat/ligs3d.sdf :info:fetch A pymol/test/dat/3al1.pdb :info:fetch A pymol/test/dat/names.pdb :info:fetch A pymol/test/dat/embed01.p1m :info:fetch A pymol/test/dat/1tii.pdb :info:fetch A pymol/test/dat/embed02.p1m :info:fetch A pymol/test/dat/odd01.pdb :info:fetch A pymol/test/dat/embed03.p1m :info:fetch A pymol/test/dat/pept.pdb :info:fetch A pymol/test/dat/odd02.pdb :info:fetch A pymol/test/dat/embed04.p1m :info:fetch A pymol/test/dat/embed05.p1m :info:fetch A pymol/test/dat/embed06.p1m :info:fetch A pymol/test/dat/small02.pdb :info:fetch A pymol/test/ref :info:fetch A pymol/test/ref/C0025mol.log :info:fetch A pymol/test/ref/C0500misc.log :info:fetch A pymol/test/ref/C0700odd.1.pdb :info:fetch A pymol/test/ref/C0700odd.2.pdb :info:fetch A pymol/test/ref/U01.log :info:fetch A pymol/test/ref/C0140iterate.log :info:fetch A pymol/test/ref/C0700odd.3.pdb :info:fetch A pymol/test/ref/M0051session.log :info:fetch A pymol/test/ref/C0700odd.4.pdb :info:fetch A pymol/test/ref/C2000returns.log :info:fetch A pymol/test/ref/C0700odd.5.pdb :info:fetch A pymol/test/ref/C0700odd.6.pdb :info:fetch A pymol/test/ref/C0700odd.7.pdb :info:fetch A pymol/test/ref/C0700odd.8.pdb :info:fetch A pymol/test/ref/C0700odd.9.pdb :info:fetch A pymol/test/ref/C1050fitting.log :info:fetch A pymol/test/ref/C0700odd.log :info:fetch A pymol/test/ref/C1095slice.log :info:fetch A pymol/test/ref/C0700odd.A.pdb :info:fetch A pymol/test/ref/C0700odd.B.pdb :info:fetch A pymol/test/ref/C0700odd.C.pdb :info:fetch A pymol/test/ref/C0106order.log :info:fetch A pymol/test/ref/C0700odd.D.pdb :info:fetch A pymol/test/ref/C0001quit.log :info:fetch A pymol/test/ref/C0700odd.E.pdb :info:fetch A pymol/test/ref/C0700odd.F.pdb :info:fetch A pymol/test/ref/C1040editing.log :info:fetch A pymol/test/ref/C0070rep.log :info:fetch A pymol/test/ref/C0202help_python.log :info:fetch A pymol/test/ref/C1060controlling.log :info:fetch A pymol/test/ref/M0050session.log :info:fetch A pymol/test/ref/C0010hello.log :info:fetch A pymol/test/ref/M0002start.log :info:fetch A pymol/test/ref/C1000viewing.log :info:fetch A pymol/test/ref/M0030scene.log :info:fetch A pymol/test/ref/C1110matrix_mode.log :info:fetch A pymol/test/ref/M0040do.log :info:fetch A pymol/test/ref/L0030isomesh.log :info:fetch A pymol/test/ref/C0300session.log :info:fetch A pymol/test/ref/C0200feedback.log :info:fetch A pymol/test/ref/M0010load.log :info:fetch A pymol/test/ref/C0201extend.log :info:fetch A pymol/test/ref/M0025view.log :info:fetch A pymol/test/ref/C0740multipdb.log :info:fetch A pymol/test/ref/C0080create.1.pdb :info:fetch A pymol/test/ref/L0010ccp4read.log :info:fetch A pymol/test/ref/C0050multi.log :info:fetch A pymol/test/ref/C0080create.2.pdb :info:fetch A pymol/test/ref/C0150alter.1.pdb :info:fetch A pymol/test/ref/T01.log :info:fetch A pymol/test/ref/M0001new.log :info:fetch A pymol/test/ref/C1100do.log :info:fetch A pymol/test/ref/C0700.odd.G.pdb :info:fetch A pymol/test/ref/M0053session.log :info:fetch A pymol/test/ref/C0170scene.log :info:fetch A pymol/test/ref/C0700.odd.H.pdb :info:fetch A pymol/test/ref/M0020multi.log :info:fetch A pymol/test/ref/C1020querying.log :info:fetch A pymol/test/ref/C0060delete.log :info:fetch A pymol/test/ref/C0105names.log :info:fetch A pymol/test/ref/C1300extras.log :info:fetch A pymol/test/ref/C0080create.log :info:fetch A pymol/test/ref/C0150alter.log :info:fetch A pymol/test/ref/C0800matrices.log :info:fetch A pymol/test/ref/C0100select.log :info:fetch A pymol/test/ref/L0100isomisc.log :info:fetch A pymol/test/ref/C0600util.log :info:fetch A pymol/test/ref/C1035wildcards.log :info:fetch A pymol/test/ref/C0180embed.log :info:fetch A pymol/test/ref/C1200matrix_maps.log :info:fetch A pymol/test/ref/C0030pkl.log :info:fetch A pymol/test/ref/C0021pdbstr.log :info:fetch A pymol/test/ref/M0052session.log :info:fetch A pymol/test/ref/L0040isomesh2.log :info:fetch A pymol/test/ref/C0020pdb.log :info:fetch A pymol/test/ref/M0021multi.log :info:fetch A pymol/test/ref/L0200electro.log :info:fetch A pymol/test/ref/C0550pseudo.log :info:fetch A pymol/test/ref/C1090coulomb.log :info:fetch A pymol/test/ref/L0020xplorread.log :info:fetch A pymol/test/ref/C0030pkl.pdb :info:fetch A pymol/test/ref/C1030selecting.log :info:fetch A pymol/test/ref/M0041do.log :info:fetch A pymol/test/ref/C0027mol2.log :info:fetch A pymol/test/ref/C0026sdf.log :info:fetch A pymol/test/ref/C1080isomore.log :info:fetch A pymol/test/ref/C0160get.log :info:fetch A pymol/test/ref/C0181embed.log :info:fetch A pymol/test/ref/C1070exporting.log :info:fetch A pymol/test/ref/C1010helping.log :info:fetch A pymol/test/ref/C0020pdb.pdb :info:fetch A pymol/test/README :info:fetch A pymol/test/vdiff :info:fetch A pymol/LICENSE :info:fetch A pymol/ov :info:fetch A pymol/ov/src :info:fetch A pymol/ov/src/Makefile.delsci :info:fetch A pymol/ov/src/OVContext.h :info:fetch A pymol/ov/src/OVOneToOne.h :info:fetch A pymol/ov/src/Makefile.in :info:fetch A pymol/ov/src/OVOneToAny.c :info:fetch A pymol/ov/src/OVLexicon.c :info:fetch A pymol/ov/src/OVOneToAny.h :info:fetch A pymol/ov/src/ov_utility.c :info:fetch A pymol/ov/src/OVLexicon.h :info:fetch A pymol/ov/src/ov_utility.h :info:fetch A pymol/ov/src/OVreturns.h :info:fetch A pymol/ov/src/ov_types.h :info:fetch A pymol/ov/src/OVHeapArray.c :info:fetch A pymol/ov/src/OVHeap.c :info:fetch A pymol/ov/src/OVRandom.c :info:fetch A pymol/ov/src/OVHeapArray.h :info:fetch A pymol/ov/src/ov_defines.h :info:fetch A pymol/ov/src/OVHeap.h :info:fetch A pymol/ov/src/Makefile.am :info:fetch A pymol/ov/src/OVContext.c :info:fetch A pymol/ov/src/OVRandom.h :info:fetch A pymol/ov/src/OVOneToOne.c :info:fetch A pymol/ov/src/ov_status.h :info:fetch A pymol/ov/src/ov_port.h :info:fetch A pymol/PACKAGING :info:fetch A pymol/AUTHORS :info:fetch A pymol/create_shadertext.py :info:fetch A pymol/setup.py :info:fetch A pymol/scripts :info:fetch A pymol/scripts/metaphorics :info:fetch A pymol/scripts/metaphorics/annotate.pml :info:fetch A pymol/scripts/metaphorics/alignment.pml :info:fetch A pymol/scripts/metaphorics/fedora.pml :info:fetch A pymol/ChangeLog :info:fetch A pymol/.svnignore :info:fetch A pymol/layer0 :info:fetch A pymol/layer0/Makefile.in :info:fetch A pymol/layer0/os_types.h :info:fetch A pymol/layer0/Word.c :info:fetch A pymol/layer0/Deferred.c :info:fetch A pymol/layer0/Word.h :info:fetch A pymol/layer0/Feedback.c 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pymol/examples/devel/povray01.py :info:fetch A pymol/examples/devel/webgui01.py :info:fetch A pymol/examples/devel/click_ordered_list.py :info:fetch A pymol/examples/devel/membrane.py :info:fetch A pymol/examples/devel/cgo_plane.py :info:fetch A pymol/examples/chempy :info:fetch A pymol/examples/chempy/generate_mmff.py :info:fetch A pymol/examples/chempy/generate_amber.py :info:fetch A pymol/examples/cookbook :info:fetch A pymol/examples/cookbook/build_peptide.py :info:fetch A pymol/examples/cookbook/dali.py :info:fetch A pymol/examples/cookbook/ss_xfer.pml :info:fetch A pymol/examples/cookbook/contact.pml :info:fetch A pymol/examples/cookbook/packing.pml :info:fetch A pymol/examples/cookbook/seq_match_sele.pml :info:fetch A pymol/examples/cookbook/multiclip_ray.pml :info:fetch A pymol/examples/cookbook/packsurf.pml :info:fetch A pymol/examples/cookbook/density.pml :info:fetch A pymol/examples/cookbook/groel_es.pml :info:fetch A pymol/examples/cookbook/ribosome.pml :info:fetch A pymol/examples/cookbook/area_diff.pml :info:fetch A pymol/examples/cookbook/scenes2movie.pml :info:fetch A pymol/examples/cookbook/symsph.py :info:fetch A pymol/examples/cookbook/ref_frame.pml :info:fetch A pymol/examples/launching :info:fetch A pymol/examples/launching/launch.py :info:fetch A pymol/examples/launching/launch_viewer1.py :info:fetch A pymol/examples/launching/launch_viewer2.py :info:fetch A pymol/examples/launching/launch_demo.py :info:fetch A pymol/examples/launching/launch_no_tk.py :info:fetch A pymol/examples/launching/README :info:fetch A pymol/examples/package :info:fetch A pymol/examples/package/redhat :info:fetch A pymol/examples/package/redhat/pymol-0.96-1.rh70.py152.spec :info:fetch A pymol/examples/package/redhat/pymol-0.96-1.rh62.py152.spec :info:fetch A pymol/examples/package/redhat/pymol-0.93-1.rh72.py21.spec :info:fetch A pymol/examples/package/redhat/pymol-0.93-1.rh80.py22.spec :info:fetch A pymol/examples/package/redhat/pymol-0.93-1.rh90.py22.spec :info:fetch A pymol/examples/package/redhat/pymol-0.93-1.rh73.py22.spec :info:fetch A pymol/examples/package/redhat/pymol-0.93-1.rh70.py152.spec :info:fetch A pymol/examples/package/redhat/pymol-0.96-1.rh72.py21.spec :info:fetch A pymol/examples/package/redhat/pymol-0.96-1.rh80.py22.spec :info:fetch A pymol/examples/package/redhat/pymol-0.93-1.rh62.py152.spec :info:fetch A pymol/examples/package/redhat/pymol-0.96-1.rh90.py22.spec :info:fetch A pymol/examples/package/redhat/pymol-0.96-1.rh73.py22.spec :info:fetch Exported revision 4074. :debug:fetch Privilege de-escalation not attempted as not running as root. :debug:checksum checksum phase started at Tue Dec 9 22:49:13 MSK 2014 :notice:checksum ---> Verifying checksums for pymol :debug:checksum Executing org.macports.checksum (pymol) :debug:checksum Privilege de-escalation not attempted as not running as root. :debug:extract extract phase started at Tue Dec 9 22:49:13 MSK 2014 :notice:extract ---> Extracting pymol :debug:extract Executing org.macports.extract (pymol) :debug:extract Privilege de-escalation not attempted as not running as root. :debug:patch patch phase started at Tue Dec 9 22:49:13 MSK 2014 :debug:patch Executing org.macports.patch (pymol) :notice:patch ---> Applying patches to pymol :info:patch ---> Applying setup_py.diff :debug:patch Environment: CC_PRINT_OPTIONS='YES' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/.CC_PRINT_OPTIONS' CPATH='/opt/local/include' LIBRARY_PATH='/opt/local/lib' MACOSX_DEPLOYMENT_TARGET='10.10' :debug:patch Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol" && /usr/bin/patch -p0' :debug:patch Executing command line: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol" && /usr/bin/patch -p0 < '/opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/science/pymol/files/setup_py.diff' :info:patch patching file setup.py :info:patch ---> Applying pymol_shell.diff :debug:patch Environment: CC_PRINT_OPTIONS='YES' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/.CC_PRINT_OPTIONS' CPATH='/opt/local/include' LIBRARY_PATH='/opt/local/lib' MACOSX_DEPLOYMENT_TARGET='10.10' :debug:patch Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol" && /usr/bin/patch -p0' :debug:patch Executing command line: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol" && /usr/bin/patch -p0 < '/opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/science/pymol/files/pymol_shell.diff' :info:patch patching file setup/pymol_macports :info:patch ---> Applying pmg_tk_platform.patch :debug:patch Environment: CC_PRINT_OPTIONS='YES' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/.CC_PRINT_OPTIONS' CPATH='/opt/local/include' LIBRARY_PATH='/opt/local/lib' MACOSX_DEPLOYMENT_TARGET='10.10' :debug:patch Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol" && /usr/bin/patch -p0' :debug:patch Executing command line: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol" && /usr/bin/patch -p0 < '/opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/science/pymol/files/pmg_tk_platform.patch' :info:patch patching file modules/pmg_tk/skins/normal/__init__.py :info:patch Hunk #1 succeeded at 259 (offset 23 lines). :info:patch Hunk #2 succeeded at 278 (offset 23 lines). :info:patch Hunk #3 succeeded at 305 (offset 23 lines). :info:patch patching file modules/pmg_tk/PMGApp.py :info:patch Hunk #1 succeeded at 203 (offset 19 lines). :info:patch Hunk #2 succeeded at 221 (offset 19 lines). :info:patch ---> Applying apbs-psize.patch :debug:patch Environment: CC_PRINT_OPTIONS='YES' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/.CC_PRINT_OPTIONS' CPATH='/opt/local/include' LIBRARY_PATH='/opt/local/lib' MACOSX_DEPLOYMENT_TARGET='10.10' :debug:patch Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol" && /usr/bin/patch -p0' :debug:patch Executing command line: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol" && /usr/bin/patch -p0 < '/opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/science/pymol/files/apbs-psize.patch' :info:patch patching file modules/pmg_tk/startup/apbs_tools.py :info:patch ---> Applying apbs_tkinter.patch :debug:patch Environment: CC_PRINT_OPTIONS='YES' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/.CC_PRINT_OPTIONS' CPATH='/opt/local/include' LIBRARY_PATH='/opt/local/lib' MACOSX_DEPLOYMENT_TARGET='10.10' :debug:patch Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol" && /usr/bin/patch -p0' :debug:patch Executing command line: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol" && /usr/bin/patch -p0 < '/opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/science/pymol/files/apbs_tkinter.patch' :info:patch patching file modules/pmg_tk/startup/apbs_tools.py :info:patch Hunk #12 succeeded at 2284 (offset 4 lines). :info:patch Hunk #13 succeeded at 2335 (offset 4 lines). :info:patch Hunk #14 succeeded at 2352 (offset 4 lines). :info:patch Hunk #15 succeeded at 2372 (offset 4 lines). :info:patch Hunk #16 succeeded at 2394 (offset 4 lines). :info:patch ---> Applying pymol-clang.diff :debug:patch Environment: CC_PRINT_OPTIONS='YES' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/.CC_PRINT_OPTIONS' CPATH='/opt/local/include' LIBRARY_PATH='/opt/local/lib' MACOSX_DEPLOYMENT_TARGET='10.10' :debug:patch Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol" && /usr/bin/patch -p0' :debug:patch Executing command line: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol" && /usr/bin/patch -p0 < '/opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/science/pymol/files/pymol-clang.diff' :info:patch patching file layer0/ShaderMgr.c :info:patch patching file layer0/Map.c :info:patch patching file layer1/Basis.c :info:patch patching file layer1/CGO.c :info:patch patching file layer1/Ortho.c :info:patch patching file layer1/P.c :info:patch patching file layer1/Extrude.c :info:patch patching file layer1/Scene.c :info:patch patching file layer1/Control.c :info:patch patching file layer2/RepSphere.c :info:patch patching file layer2/ObjectMolecule2.c :info:patch patching file layer2/RepDot.c :info:patch patching file layer2/RepSurface.c :info:patch patching file layer2/RepCartoon.c :info:patch patching file layer2/ObjectMolecule.c :info:patch patching file layer3/Selector.c :info:patch patching file layer3/Executive.c :info:patch patching file layer3/PlugIOManager.c :info:patch patching file layer4/Cmd.c :info:patch patching file contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp :info:patch patching file contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp :info:patch patching file contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c :info:patch patching file contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c :info:patch patching file contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c :info:patch patching file contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp :info:patch patching file contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp :info:patch patching file modules/cealign/src/tnt/tnt_fortran_array1d.h :info:patch patching file modules/cealign/src/tnt/tnt_array1d.h :debug:patch Executing proc-post-org.macports.patch-patch-0 :info:patch ---> Patching setup.py: s|@PREFIX@|/opt/local|g :debug:patch Executing reinplace: /usr/bin/sed s|@PREFIX@|/opt/local|g < /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol/setup.py >@ file10 2>@stderr :debug:patch euid/egid changed to: 0/0 :debug:patch chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol/setup.py to macports :debug:patch euid/egid changed to: 502/501 :debug:patch euid/egid changed to: 0/0 :debug:patch setting attributes on /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol/setup.py :debug:patch euid/egid changed to: 502/501 :info:patch ---> Patching pymol_macports: s|@@PYTHON_PKGDIR@@|/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages|g :debug:patch Executing reinplace: /usr/bin/sed s|@@PYTHON_PKGDIR@@|/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages|g < /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol/setup/pymol_macports >@ file10 2>@stderr :debug:patch euid/egid changed to: 0/0 :debug:patch chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol/setup/pymol_macports to macports :debug:patch euid/egid changed to: 502/501 :debug:patch euid/egid changed to: 0/0 :debug:patch setting attributes on /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol/setup/pymol_macports :debug:patch euid/egid changed to: 502/501 :info:patch ---> Patching pymol_macports: s|@@PYTHON_BINARY@@|/opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7|g :debug:patch Executing reinplace: /usr/bin/sed s|@@PYTHON_BINARY@@|/opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7|g < /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol/setup/pymol_macports >@ file10 2>@stderr :debug:patch euid/egid changed to: 0/0 :debug:patch chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol/setup/pymol_macports to macports :debug:patch euid/egid changed to: 502/501 :debug:patch euid/egid changed to: 0/0 :debug:patch setting attributes on /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol/setup/pymol_macports :debug:patch euid/egid changed to: 502/501 :info:patch ---> Patching setup.py: s|"-O3",|"-O3", "-g",|g :debug:patch Executing reinplace: /usr/bin/sed {s|"-O3",|"-O3", "-g",|g} < /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol/setup.py >@ file10 2>@stderr :debug:patch euid/egid changed to: 0/0 :debug:patch chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol/setup.py to macports :debug:patch euid/egid changed to: 502/501 :debug:patch euid/egid changed to: 0/0 :debug:patch setting attributes on /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol/setup.py :debug:patch euid/egid changed to: 502/501 :debug:patch Privilege de-escalation not attempted as not running as root. :debug:configure configure phase started at Tue Dec 9 22:49:15 MSK 2014 :notice:configure ---> Configuring pymol :debug:configure Using compiler 'Xcode Clang' :debug:configure Executing proc-pre-org.macports.configure-configure-0 :debug:configure Found Dependency: path: /usr/bin filename: svn regex: ^svn$ :debug:configure Active variants check for source-type install considers depends_fetch depends_extract depends_lib depends_build depends_run: python27 freeglut freetype glew libpng mesa py27-numpy py27-pmw py27-scipy py27-tkinter xdpyinfo :debug:configure Ignoring active_variants requirement for tcl because source-type install only considers depends_fetch depends_extract depends_lib depends_build depends_run and those do not contain tcl :debug:configure Ignoring active_variants requirement for tk because source-type install only considers depends_fetch depends_extract depends_lib depends_build depends_run and those do not contain tk :debug:configure Executing org.macports.configure (pymol) :debug:configure Privilege de-escalation not attempted as not running as root. :debug:build build phase started at Tue Dec 9 22:49:15 MSK 2014 :notice:build ---> Building pymol :debug:build Executing proc-pre-org.macports.build-build-0 :debug:build Executing org.macports.build (pymol) :debug:build Privilege de-escalation not attempted as not running as root. :debug:destroot destroot phase started at Tue Dec 9 22:49:15 MSK 2014 :notice:destroot ---> Staging pymol into destroot :debug:destroot Can't run destroot under sudo without elevated privileges (due to mtree). :debug:destroot Run destroot without sudo to avoid root privileges. :debug:destroot Going to escalate privileges back to root. :debug:destroot euid changed to: 0. egid changed to: 0. :info:destroot . changed :info:destroot gid expected 0 found 80 modified :info:destroot ./usr missing (created) :info:destroot . missing (directory not created: File exists) :info:destroot ./Applications missing (created) :info:destroot ./Developer missing (created) :info:destroot ./Library missing (created) :info:destroot . changed :info:destroot gid expected 80 found 0 modified :info:destroot ./bin missing (created) :info:destroot ./etc missing (created) :info:destroot ./include missing (created) :info:destroot ./lib missing (created) :info:destroot ./lib/pkgconfig missing (created) :info:destroot ./libexec missing (created) :info:destroot ./sbin missing (created) :info:destroot ./share missing (created) :info:destroot ./share/info missing (created) :info:destroot ./share/man missing (created) :info:destroot ./share/man/cat1 missing (created) :info:destroot ./share/man/cat2 missing (created) :info:destroot ./share/man/cat3 missing (created) :info:destroot ./share/man/cat4 missing (created) :info:destroot ./share/man/cat5 missing (created) :info:destroot ./share/man/cat6 missing (created) :info:destroot ./share/man/cat7 missing (created) :info:destroot ./share/man/cat8 missing (created) :info:destroot ./share/man/cat9 missing (created) :info:destroot ./share/man/catl missing (created) :info:destroot ./share/man/catn missing (created) :info:destroot ./share/man/man1 missing (created) :info:destroot ./share/man/man2 missing (created) :info:destroot ./share/man/man3 missing (created) :info:destroot ./share/man/man4 missing (created) :info:destroot ./share/man/man5 missing (created) :info:destroot ./share/man/man6 missing (created) :info:destroot ./share/man/man7 missing (created) :info:destroot ./share/man/man8 missing (created) :info:destroot ./share/man/man9 missing (created) :info:destroot ./share/man/manl missing (created) :info:destroot ./share/man/mann missing (created) :info:destroot ./share/nls missing (created) :info:destroot ./share/nls/C missing (created) :info:destroot ./share/nls/af_ZA.ISO8859-1 missing (created) :info:destroot ./share/nls/af_ZA.ISO8859-15 missing (created) :info:destroot ./share/nls/bg_BG.CP1251 missing (created) :info:destroot ./share/nls/cs_CZ.ISO8859-2 missing (created) :info:destroot ./share/nls/da_DK.ISO8859-1 missing (created) :info:destroot ./share/nls/da_DK.ISO8859-15 missing (created) :info:destroot ./share/nls/de_AT.ISO8859-1 missing (created) :info:destroot ./share/nls/de_AT.ISO8859-15 missing (created) :info:destroot ./share/nls/de_CH.ISO8859-1 missing (created) :info:destroot ./share/nls/de_CH.ISO8859-15 missing (created) :info:destroot ./share/nls/de_DE.ISO8859-1 missing (created) :info:destroot ./share/nls/de_DE.ISO8859-15 missing (created) :info:destroot ./share/nls/el_GR.ISO8859-7 missing (created) :info:destroot ./share/nls/en_AU.ISO8859-1 missing (created) :info:destroot ./share/nls/en_AU.ISO8859-15 missing (created) :info:destroot ./share/nls/en_AU.US-ASCII missing (created) :info:destroot ./share/nls/en_CA.ISO8859-1 missing (created) :info:destroot ./share/nls/en_CA.ISO8859-15 missing (created) :info:destroot ./share/nls/en_CA.US-ASCII missing (created) :info:destroot ./share/nls/en_GB.ISO8859-1 missing (created) :info:destroot ./share/nls/en_GB.ISO8859-15 missing (created) :info:destroot ./share/nls/en_GB.US-ASCII missing (created) :info:destroot ./share/nls/en_NZ.ISO8859-1 missing (created) :info:destroot ./share/nls/en_NZ.ISO8859-15 missing (created) :info:destroot ./share/nls/en_NZ.US-ASCII missing (created) :info:destroot ./share/nls/en_US.ISO8859-1 missing (created) :info:destroot ./share/nls/en_US.ISO8859-15 missing (created) :info:destroot ./share/nls/es_ES.ISO8859-1 missing (created) :info:destroot ./share/nls/es_ES.ISO8859-15 missing (created) :info:destroot ./share/nls/et_EE.ISO8859-15 missing (created) :info:destroot ./share/nls/fi_FI.ISO8859-1 missing (created) :info:destroot ./share/nls/fi_FI.ISO8859-15 missing (created) :info:destroot ./share/nls/fr_BE.ISO8859-1 missing (created) :info:destroot ./share/nls/fr_BE.ISO8859-15 missing (created) :info:destroot ./share/nls/fr_CA.ISO8859-1 missing (created) :info:destroot ./share/nls/fr_CA.ISO8859-15 missing (created) :info:destroot ./share/nls/fr_CH.ISO8859-1 missing (created) :info:destroot ./share/nls/fr_CH.ISO8859-15 missing (created) :info:destroot ./share/nls/fr_FR.ISO8859-1 missing (created) :info:destroot ./share/nls/fr_FR.ISO8859-15 missing (created) :info:destroot ./share/nls/hi_IN.ISCII-DEV missing (created) :info:destroot ./share/nls/hr_HR.ISO8859-2 missing (created) :info:destroot ./share/nls/hu_HU.ISO8859-2 missing (created) :info:destroot ./share/nls/is_IS.ISO8859-1 missing (created) :info:destroot ./share/nls/is_IS.ISO8859-15 missing (created) :info:destroot ./share/nls/it_CH.ISO8859-1 missing (created) :info:destroot ./share/nls/it_CH.ISO8859-15 missing (created) :info:destroot ./share/nls/it_IT.ISO8859-1 missing (created) :info:destroot ./share/nls/it_IT.ISO8859-15 missing (created) :info:destroot ./share/nls/ja_JP.SJIS missing (created) :info:destroot ./share/nls/ja_JP.eucJP missing (created) :info:destroot ./share/nls/ko_KR.eucKR missing (created) :info:destroot ./share/nls/la_LN.ISO8859-1 missing (created) :info:destroot ./share/nls/la_LN.ISO8859-15 missing (created) :info:destroot ./share/nls/la_LN.ISO8859-2 missing (created) :info:destroot ./share/nls/la_LN.ISO8859-4 missing (created) :info:destroot ./share/nls/la_LN.US-ASCII missing (created) :info:destroot ./share/nls/lt_LT.ISO8859-4 missing (created) :info:destroot ./share/nls/nl_BE.ISO8859-1 missing (created) :info:destroot ./share/nls/nl_BE.ISO8859-15 missing (created) :info:destroot ./share/nls/nl_NL.ISO8859-1 missing (created) :info:destroot ./share/nls/nl_NL.ISO8859-15 missing (created) :info:destroot ./share/nls/no_NO.ISO8859-1 missing (created) :info:destroot ./share/nls/no_NO.ISO8859-15 missing (created) :info:destroot ./share/nls/pl_PL.ISO8859-2 missing (created) :info:destroot ./share/nls/pt_BR.ISO8859-1 missing (created) :info:destroot ./share/nls/pt_PT.ISO8859-1 missing (created) :info:destroot ./share/nls/pt_PT.ISO8859-15 missing (created) :info:destroot ./share/nls/ro_RO.ISO8859-2 missing (created) :info:destroot ./share/nls/ru_RU.CP866 missing (created) :info:destroot ./share/nls/ru_RU.ISO8859-5 missing (created) :info:destroot ./share/nls/ru_RU.KOI8-R missing (created) :info:destroot ./share/nls/sk_SK.ISO8859-2 missing (created) :info:destroot ./share/nls/sl_SI.ISO8859-2 missing (created) :info:destroot ./share/nls/sv_SE.ISO8859-1 missing (created) :info:destroot ./share/nls/sv_SE.ISO8859-15 missing (created) :info:destroot ./share/nls/tr_TR.ISO8859-9 missing (created) :info:destroot ./share/nls/uk_UA.ISO8859-5 missing (created) :info:destroot ./share/nls/uk_UA.KOI8-U missing (created) :info:destroot ./share/nls/zh_CN.eucCN missing (created) :info:destroot ./share/nls/zh_TW.Big5 missing (created) :info:destroot ./share/skel missing (created) :info:destroot ./src missing (created) :info:destroot ./var missing (created) :info:destroot ./www missing (created) :debug:destroot Executing proc-pre-org.macports.destroot-destroot-0 :info:destroot xinstall: mkdir /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/share/doc :info:destroot xinstall: mkdir /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/share/doc/pymol :info:destroot xinstall: mkdir /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/share/doc/pymol/examples :debug:destroot Executing proc-pre-org.macports.destroot-destroot-1 :debug:destroot Executing org.macports.destroot (pymol) :debug:destroot Environment: CC='/usr/bin/clang' CC_PRINT_OPTIONS='YES' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/.CC_PRINT_OPTIONS' CPATH='/opt/local/include' CXX='/usr/bin/clang++' LIBRARY_PATH='/opt/local/lib' MACOSX_DEPLOYMENT_TARGET='10.10' :debug:destroot Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol" && /opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7 setup.py --no-user-cfg install --prefix=/opt/local/Library/Frameworks/Python.framework/Versions/2.7 --root=/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot' :debug:destroot Executing command line: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol" && /opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7 setup.py --no-user-cfg install --prefix=/opt/local/Library/Frameworks/Python.framework/Versions/2.7 --root=/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot :info:destroot fatal: Not a git repository (or any of the parent directories): .git :info:destroot svn: E155007: '/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol' is not a working copy :info:destroot running install :info:destroot running build :info:destroot running build_py :info:destroot creating build/lib.macosx-10.10-x86_64-2.7 :info:destroot creating build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot creating build/lib.macosx-10.10-x86_64-2.7/pymol/embed :info:destroot creating build/lib.macosx-10.10-x86_64-2.7/pymol/embed/epymol :info:destroot copying modules/pymol/embed/epymol/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/embed/epymol :info:destroot creating build/lib.macosx-10.10-x86_64-2.7/chempy :info:destroot creating build/lib.macosx-10.10-x86_64-2.7/chempy/tinker :info:destroot copying modules/chempy/tinker/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/chempy/tinker :info:destroot copying modules/chempy/tinker/amber.py -> build/lib.macosx-10.10-x86_64-2.7/chempy/tinker :info:destroot copying modules/chempy/tinker/keyword.py -> build/lib.macosx-10.10-x86_64-2.7/chempy/tinker :info:destroot copying modules/chempy/tinker/realtime.py -> build/lib.macosx-10.10-x86_64-2.7/chempy/tinker :info:destroot copying modules/chempy/tinker/state.py -> build/lib.macosx-10.10-x86_64-2.7/chempy/tinker :info:destroot creating build/lib.macosx-10.10-x86_64-2.7/pmg_tk :info:destroot creating build/lib.macosx-10.10-x86_64-2.7/pmg_tk/skins :info:destroot creating build/lib.macosx-10.10-x86_64-2.7/pmg_tk/skins/demo :info:destroot copying modules/pmg_tk/skins/demo/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/pmg_tk/skins/demo :info:destroot creating build/lib.macosx-10.10-x86_64-2.7/pmg_tk/startup :info:destroot copying modules/pmg_tk/startup/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/pmg_tk/startup :info:destroot copying modules/pmg_tk/startup/apbs_tools.py -> build/lib.macosx-10.10-x86_64-2.7/pmg_tk/startup :info:destroot copying modules/pmg_tk/startup/remote_pdb_load.py -> build/lib.macosx-10.10-x86_64-2.7/pmg_tk/startup :info:destroot creating build/lib.macosx-10.10-x86_64-2.7/pymol/opengl :info:destroot creating build/lib.macosx-10.10-x86_64-2.7/pymol/opengl/glu :info:destroot copying modules/pymol/opengl/glu/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/opengl/glu :info:destroot creating build/lib.macosx-10.10-x86_64-2.7/pmg_wx :info:destroot copying modules/pmg_wx/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/pmg_wx :info:destroot creating build/lib.macosx-10.10-x86_64-2.7/chempy/fast :info:destroot copying modules/chempy/fast/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/chempy/fast :info:destroot creating build/lib.macosx-10.10-x86_64-2.7/chempy/fragments :info:destroot copying modules/chempy/fragments/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/chempy/fragments :info:destroot copying modules/pmg_tk/skins/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/pmg_tk/skins :info:destroot creating build/lib.macosx-10.10-x86_64-2.7/web :info:destroot copying modules/web/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/web :info:destroot copying modules/web/pymolhttpd.py -> build/lib.macosx-10.10-x86_64-2.7/web :info:destroot copying modules/pymol/embed/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/embed :info:destroot creating build/lib.macosx-10.10-x86_64-2.7/pymol/contrib :info:destroot copying modules/pymol/contrib/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/contrib :info:destroot creating build/lib.macosx-10.10-x86_64-2.7/pymol/opengl/glut :info:destroot copying modules/pymol/opengl/glut/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/opengl/glut :info:destroot creating build/lib.macosx-10.10-x86_64-2.7/pymol2 :info:destroot copying modules/pymol2/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/pymol2 :info:destroot copying modules/pymol2/cmd2.py -> build/lib.macosx-10.10-x86_64-2.7/pymol2 :info:destroot copying modules/pymol2/make_cmd2.py -> build/lib.macosx-10.10-x86_64-2.7/pymol2 :info:destroot creating build/lib.macosx-10.10-x86_64-2.7/web/examples :info:destroot copying modules/web/examples/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/web/examples :info:destroot copying modules/web/examples/justhttpd.py -> build/lib.macosx-10.10-x86_64-2.7/web/examples :info:destroot copying modules/pmg_tk/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/pmg_tk :info:destroot copying modules/pmg_tk/ColorEditor.py -> build/lib.macosx-10.10-x86_64-2.7/pmg_tk :info:destroot copying modules/pmg_tk/Demo.py -> build/lib.macosx-10.10-x86_64-2.7/pmg_tk :info:destroot copying modules/pmg_tk/PMGApp.py -> build/lib.macosx-10.10-x86_64-2.7/pmg_tk :info:destroot copying modules/pmg_tk/PyMOLMapLoad.py -> build/lib.macosx-10.10-x86_64-2.7/pmg_tk :info:destroot copying modules/pmg_tk/SetEditor.py -> build/lib.macosx-10.10-x86_64-2.7/pmg_tk :info:destroot copying modules/pmg_tk/Setting.py -> build/lib.macosx-10.10-x86_64-2.7/pmg_tk :info:destroot copying modules/pmg_tk/TextEditor.py -> build/lib.macosx-10.10-x86_64-2.7/pmg_tk :info:destroot copying modules/pmg_tk/volume.py -> build/lib.macosx-10.10-x86_64-2.7/pmg_tk :info:destroot creating build/lib.macosx-10.10-x86_64-2.7/pmg_tk/skins/normal :info:destroot copying modules/pmg_tk/skins/normal/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/pmg_tk/skins/normal :info:destroot copying modules/pmg_tk/skins/normal/builder.py -> build/lib.macosx-10.10-x86_64-2.7/pmg_tk/skins/normal :info:destroot copying modules/pmg_tk/skins/normal/ModalWindow.py -> build/lib.macosx-10.10-x86_64-2.7/pmg_tk/skins/normal :info:destroot creating build/lib.macosx-10.10-x86_64-2.7/chempy/champ :info:destroot copying modules/chempy/champ/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/chempy/champ :info:destroot copying modules/chempy/champ/amber99.py -> build/lib.macosx-10.10-x86_64-2.7/chempy/champ :info:destroot copying modules/chempy/champ/assign.py -> build/lib.macosx-10.10-x86_64-2.7/chempy/champ :info:destroot copying modules/chempy/champ/formal_charges.py -> build/lib.macosx-10.10-x86_64-2.7/chempy/champ :info:destroot creating build/lib.macosx-10.10-x86_64-2.7/pymol/embed/wxpymol :info:destroot copying modules/pymol/embed/wxpymol/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/embed/wxpymol :info:destroot creating build/lib.macosx-10.10-x86_64-2.7/pymol/wizard :info:destroot copying modules/pymol/wizard/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard :info:destroot copying modules/pymol/wizard/annotation.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard :info:destroot copying modules/pymol/wizard/appearance.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard :info:destroot copying modules/pymol/wizard/benchmark.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard :info:destroot copying modules/pymol/wizard/box.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard :info:destroot copying modules/pymol/wizard/charge.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard :info:destroot copying modules/pymol/wizard/cleanup.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard :info:destroot copying modules/pymol/wizard/demo.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard :info:destroot copying modules/pymol/wizard/density.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard :info:destroot copying modules/pymol/wizard/distance.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard :info:destroot copying modules/pymol/wizard/dragging.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard :info:destroot copying modules/pymol/wizard/fedora.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard :info:destroot copying modules/pymol/wizard/filter.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard :info:destroot copying modules/pymol/wizard/label.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard :info:destroot copying modules/pymol/wizard/measurement.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard :info:destroot copying modules/pymol/wizard/message.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard :info:destroot copying modules/pymol/wizard/mutagenesis.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard :info:destroot copying modules/pymol/wizard/pair_fit.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard :info:destroot copying modules/pymol/wizard/pseudoatom.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard :info:destroot copying modules/pymol/wizard/renaming.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard :info:destroot copying modules/pymol/wizard/sculpting.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard :info:destroot copying modules/pymol/wizard/security.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard :info:destroot copying modules/pymol/wizard/stereodemo.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard :info:destroot copying modules/pymol/wizard/toggle.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/wizard :info:destroot creating build/lib.macosx-10.10-x86_64-2.7/pymol/opengl/gl :info:destroot copying modules/pymol/opengl/gl/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/opengl/gl :info:destroot copying modules/pymol/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/api.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/callback.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/cgo.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/checking.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/cmd.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/colorramping.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/commanding.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/completing.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/computing.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/constants.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/constants_palette.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/controlling.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/creating.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/editing.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/editor.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/experimenting.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/exporting.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/externing.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/feedingback.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/fitting.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/gui.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/headering.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/helping.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/importing.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/internal.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/invocation.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/keyboard.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/keywords.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/locking.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/m4x.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/menu.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/monitoring.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/movie.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/moving.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/parser.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/parsing.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/povray.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/preset.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/querying.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/rpc.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/selecting.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/selector.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/setting.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/shortcut.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/util.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/vfont.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/viewing.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/wizarding.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/xray.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot copying modules/pymol/xwin.py -> build/lib.macosx-10.10-x86_64-2.7/pymol :info:destroot creating build/lib.macosx-10.10-x86_64-2.7/chempy/bmin :info:destroot copying modules/chempy/bmin/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/chempy/bmin :info:destroot copying modules/chempy/bmin/commands.py -> build/lib.macosx-10.10-x86_64-2.7/chempy/bmin :info:destroot copying modules/chempy/bmin/realtime.py -> build/lib.macosx-10.10-x86_64-2.7/chempy/bmin :info:destroot copying modules/chempy/bmin/state.py -> build/lib.macosx-10.10-x86_64-2.7/chempy/bmin :info:destroot copying modules/chempy/bmin/util.py -> build/lib.macosx-10.10-x86_64-2.7/chempy/bmin :info:destroot copying modules/chempy/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/chempy :info:destroot copying modules/chempy/arc.py -> build/lib.macosx-10.10-x86_64-2.7/chempy :info:destroot copying modules/chempy/bond_amber.py -> build/lib.macosx-10.10-x86_64-2.7/chempy :info:destroot copying modules/chempy/bond_mmff.py -> build/lib.macosx-10.10-x86_64-2.7/chempy :info:destroot copying modules/chempy/bonds.py -> build/lib.macosx-10.10-x86_64-2.7/chempy :info:destroot copying modules/chempy/brick.py -> build/lib.macosx-10.10-x86_64-2.7/chempy :info:destroot copying modules/chempy/cc1.py -> build/lib.macosx-10.10-x86_64-2.7/chempy :info:destroot copying modules/chempy/cex.py -> build/lib.macosx-10.10-x86_64-2.7/chempy :info:destroot copying modules/chempy/charge.py -> build/lib.macosx-10.10-x86_64-2.7/chempy :info:destroot copying modules/chempy/cif.py -> build/lib.macosx-10.10-x86_64-2.7/chempy :info:destroot copying modules/chempy/cpv.py -> build/lib.macosx-10.10-x86_64-2.7/chempy :info:destroot copying modules/chempy/dictdb.py -> build/lib.macosx-10.10-x86_64-2.7/chempy :info:destroot copying modules/chempy/gamess1.py -> build/lib.macosx-10.10-x86_64-2.7/chempy :info:destroot copying modules/chempy/gms.py -> build/lib.macosx-10.10-x86_64-2.7/chempy :info:destroot copying modules/chempy/hetatm.py -> build/lib.macosx-10.10-x86_64-2.7/chempy :info:destroot copying modules/chempy/io.py -> build/lib.macosx-10.10-x86_64-2.7/chempy :info:destroot copying modules/chempy/lst.py -> build/lib.macosx-10.10-x86_64-2.7/chempy :info:destroot copying modules/chempy/mae.py -> build/lib.macosx-10.10-x86_64-2.7/chempy :info:destroot copying modules/chempy/map.py -> build/lib.macosx-10.10-x86_64-2.7/chempy :info:destroot copying modules/chempy/mass.py -> build/lib.macosx-10.10-x86_64-2.7/chempy :info:destroot copying modules/chempy/mmd.py -> build/lib.macosx-10.10-x86_64-2.7/chempy :info:destroot copying modules/chempy/models.py -> build/lib.macosx-10.10-x86_64-2.7/chempy :info:destroot copying modules/chempy/mol.py -> build/lib.macosx-10.10-x86_64-2.7/chempy :info:destroot copying modules/chempy/mol2.py -> build/lib.macosx-10.10-x86_64-2.7/chempy :info:destroot copying modules/chempy/neighbor.py -> build/lib.macosx-10.10-x86_64-2.7/chempy :info:destroot copying modules/chempy/pdb.py -> build/lib.macosx-10.10-x86_64-2.7/chempy :info:destroot copying modules/chempy/pkl.py -> build/lib.macosx-10.10-x86_64-2.7/chempy :info:destroot copying modules/chempy/place.py -> build/lib.macosx-10.10-x86_64-2.7/chempy :info:destroot copying modules/chempy/protein.py -> build/lib.macosx-10.10-x86_64-2.7/chempy :info:destroot copying modules/chempy/protein_amber.py -> build/lib.macosx-10.10-x86_64-2.7/chempy :info:destroot copying modules/chempy/protein_amber99.py -> build/lib.macosx-10.10-x86_64-2.7/chempy :info:destroot copying modules/chempy/protein_mmff.py -> build/lib.macosx-10.10-x86_64-2.7/chempy :info:destroot copying modules/chempy/protein_residues.py -> build/lib.macosx-10.10-x86_64-2.7/chempy :info:destroot copying modules/chempy/sdf.py -> build/lib.macosx-10.10-x86_64-2.7/chempy :info:destroot copying modules/chempy/solvate.py -> build/lib.macosx-10.10-x86_64-2.7/chempy :info:destroot copying modules/chempy/water_amber.py -> build/lib.macosx-10.10-x86_64-2.7/chempy :info:destroot copying modules/chempy/water_residues.py -> build/lib.macosx-10.10-x86_64-2.7/chempy :info:destroot copying modules/chempy/xyz.py -> build/lib.macosx-10.10-x86_64-2.7/chempy :info:destroot creating build/lib.macosx-10.10-x86_64-2.7/pymol/plugins :info:destroot copying modules/pymol/plugins/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/plugins :info:destroot copying modules/pymol/plugins/installation.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/plugins :info:destroot copying modules/pymol/plugins/legacysupport.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/plugins :info:destroot copying modules/pymol/plugins/managergui.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/plugins :info:destroot copying modules/pymol/plugins/repository.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/plugins :info:destroot copying modules/pymol/opengl/__init__.py -> build/lib.macosx-10.10-x86_64-2.7/pymol/opengl :info:destroot running build_ext :info:destroot building 'pymol._cmd' extension :info:destroot creating build/temp.macosx-10.10-x86_64-2.7 :info:destroot creating build/temp.macosx-10.10-x86_64-2.7/ov :info:destroot creating build/temp.macosx-10.10-x86_64-2.7/ov/src :info:destroot creating build/temp.macosx-10.10-x86_64-2.7/layer0 :info:destroot creating build/temp.macosx-10.10-x86_64-2.7/layer1 :info:destroot creating build/temp.macosx-10.10-x86_64-2.7/layer2 :info:destroot creating build/temp.macosx-10.10-x86_64-2.7/layer3 :info:destroot creating build/temp.macosx-10.10-x86_64-2.7/layer4 :info:destroot creating build/temp.macosx-10.10-x86_64-2.7/layer5 :info:destroot creating build/temp.macosx-10.10-x86_64-2.7/modules :info:destroot creating build/temp.macosx-10.10-x86_64-2.7/modules/cealign :info:destroot creating build/temp.macosx-10.10-x86_64-2.7/modules/cealign/src :info:destroot creating build/temp.macosx-10.10-x86_64-2.7/build :info:destroot creating build/temp.macosx-10.10-x86_64-2.7/build/generated :info:destroot creating build/temp.macosx-10.10-x86_64-2.7/contrib :info:destroot creating build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc :info:destroot creating build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins :info:destroot creating build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin :info:destroot creating build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c ov/src/ov_utility.c -o build/temp.macosx-10.10-x86_64-2.7/ov/src/ov_utility.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Err.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Err.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Pixmap.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Pixmap.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/Basis.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/Basis.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/ButMode.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/ButMode.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c ov/src/OVContext.c -o build/temp.macosx-10.10-x86_64-2.7/ov/src/OVContext.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Feedback.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Feedback.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Queue.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Queue.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Field.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Field.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c ov/src/OVHeap.c -o build/temp.macosx-10.10-x86_64-2.7/ov/src/OVHeap.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c ov/src/OVHeapArray.c -o build/temp.macosx-10.10-x86_64-2.7/ov/src/OVHeapArray.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Raw.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Raw.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c ov/src/OVLexicon.c -o build/temp.macosx-10.10-x86_64-2.7/ov/src/OVLexicon.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/CGO.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/CGO.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/ShaderMgr.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/ShaderMgr.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Isosurf.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Isosurf.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c ov/src/OVOneToAny.c -o build/temp.macosx-10.10-x86_64-2.7/ov/src/OVOneToAny.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot layer0/Isosurf.c:2211:1:layer0/ShaderMgr.c: warning: 521:11: warning: control reaches end of non-void function [-Wreturn-type]using the result of an assignment as a condition without parentheses [-Wparentheses] :info:destroot :info:destroot layer1/CGO.c:1881:6: warning: unused variable 'ncolors' [-Wunused-variable] :info:destroot } :info:destroot ^ :info:destroot int ncolors = 0; :info:destroot ^ :info:destroot if (err = glGetError()){ :info:destroot ~~~~^~~~~~~~~~~~~~ :info:destroot layer0/ShaderMgr.c:521:11: note: place parentheses around the assignment to silence this warning :info:destroot if (err = glGetError()){ :info:destroot ^ :info:destroot ( ) :info:destroot layer0/ShaderMgr.c:521:11: note: use '==' to turn this assignment into an equality comparison :info:destroot if (err = glGetError()){ :info:destroot ^ :info:destroot == :info:destroot layer0/ShaderMgr.c:528:13: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] :info:destroot if (err = glGetError()){ :info:destroot ~~~~^~~~~~~~~~~~~~ :info:destroot layer0/ShaderMgr.c:528:13: note: place parentheses around the assignment to silence this warning :info:destroot if (err = glGetError()){ :info:destroot ^ :info:destroot ( ) :info:destroot layer0/ShaderMgr.c:528:13: note: use '==' to turn this assignment into an equality comparison :info:destroot if (err = glGetError()){ :info:destroot ^ :info:destroot == :info:destroot layer0/ShaderMgr.c:827:14: warning: unused variable 'err' [-Wunused-variable] :info:destroot GLenum err ; :info:destroot ^ :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c ov/src/OVOneToOne.c -o build/temp.macosx-10.10-x86_64-2.7/ov/src/OVOneToOne.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c ov/src/OVRandom.c -o build/temp.macosx-10.10-x86_64-2.7/ov/src/OVRandom.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Block.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Block.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot 3 warnings generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Sphere.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Sphere.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Crystal.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Crystal.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot layer0/Sphere.c:34:20: warning: unused variable 'start_points' [-Wunused-const-variable] :info:destroot static const float start_points[13][3] = { :info:destroot ^ :info:destroot layer0/Sphere.c:49:18: warning: unused variable 'icosahedron' [-Wunused-const-variable] :info:destroot static const int icosahedron[21][3] = { :info:destroot ^ :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Debug.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Debug.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot 2 warnings generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Deferred.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Deferred.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Tetsurf.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Tetsurf.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot 1 warning generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Map.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Map.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/FontGLUTHel12.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/FontGLUTHel12.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/FontGLUTHel18.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/FontGLUTHel18.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/FontType.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/FontType.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Match.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Match.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/Movie.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/Movie.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Matrix.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Matrix.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Texture.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Texture.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Tracker.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Tracker.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/Ortho.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/Ortho.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Triangle.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Triangle.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/P.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/P.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/MemoryCache.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/MemoryCache.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/MemoryDebug.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/MemoryDebug.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/MyPNG.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/MyPNG.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/os_gl.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/os_gl.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot layer0/os_gl.c:99:59: warning: 'gluErrorString' is deprecated: first deprecated in OS X 10.9 [-Wdeprecated-declarations] :info:destroot printf("OpenGL-Error: Where? %s: %s\n", pos, (char *) gluErrorString(glerr)); :info:destroot ^ :info:destroot /System/Library/Frameworks/OpenGL.framework/Headers/glu.h:260:24: note: 'gluErrorString' has been explicitly marked deprecated here :info:destroot extern const GLubyte * gluErrorString (GLenum error) OPENGL_DEPRECATED(10_0, 10_9); :info:destroot ^ :info:destroot 1 warning generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Parse.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Parse.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot layer0/Parse.c:173:10: warning: array subscript is of type 'char' [-Wchar-subscripts] :info:destroot buf[blen] = 0; :info:destroot ^~~~~ :info:destroot 1 warning generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/ScrollBar.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/ScrollBar.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot 1 warning generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/Character.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/Character.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Util.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Util.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot layer1/Character.c:267:18: warning: unused variable 'vertexVals' [-Wunused-variable] :info:destroot const GLfloat vertexVals [] = { :info:destroot ^ :info:destroot layer1/Character.c:273:18: warning: unused variable 'texVals' [-Wunused-variable] :info:destroot const GLfloat texVals [] = { :info:destroot ^ :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/PConv.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/PConv.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/Seq.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/Seq.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot 2 warnings generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Vector.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Vector.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/Color.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/Color.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot layer1/Color.c:3069:16: warning: unused variable 'result' [-Wunused-variable] :info:destroot unsigned int result; :info:destroot ^ :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/Pop.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/Pop.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/Setting.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/Setting.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer0/Word.c -o build/temp.macosx-10.10-x86_64-2.7/layer0/Word.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/PyMOLObject.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/PyMOLObject.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/GadgetSet.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/GadgetSet.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot 1 warning generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/Control.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/Control.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/Ray.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/Ray.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/ObjectAlignment.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectAlignment.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/Extrude.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/Extrude.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/Shaker.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/Shaker.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/ObjectCallback.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectCallback.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/ObjectCGO.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectCGO.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/Symmetry.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/Symmetry.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/Font.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/Font.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/FontGLUT.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/FontGLUT.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/Text.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/Text.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/FontGLUT8x13.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/FontGLUT8x13.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/ObjectDist.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectDist.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/FontGLUT9x15.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/FontGLUT9x15.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/FontGLUTHel10.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/FontGLUTHel10.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/ObjectSlice.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectSlice.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/ObjectGadget.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectGadget.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/ObjectGadgetRamp.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectGadgetRamp.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/ObjectSurface.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectSurface.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/ObjectGroup.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectGroup.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/ObjectVolume.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectVolume.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/ObjectMap.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectMap.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot layer2/ObjectVolume.c:73:19: warning: unused variable 'oms' [-Wunused-variable] :info:destroot ObjectMapState *oms = NULL; :info:destroot ^ :info:destroot layer2/ObjectVolume.c:471:9: warning: '&&' within '||' [-Wlogical-op-parentheses] :info:destroot && vs->Ramp[5 * (vs->RampSize - 1)] == 359.f) { :info:destroot ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ :info:destroot layer2/ObjectVolume.c:471:9: note: place parentheses around the '&&' expression to silence this warning :info:destroot && vs->Ramp[5 * (vs->RampSize - 1)] == 359.f) { :info:destroot ^ :info:destroot layer2/ObjectVolume.c:452:51: warning: expression result unused [-Wunused-value] :info:destroot a, vs->RefreshFlag, vs->ResurfaceFlag ENDFD(G); :info:destroot ^ :info:destroot layer2/ObjectVolume.c:435:14: warning: unused variable 'map' [-Wunused-variable] :info:destroot ObjectMap *map = NULL; :info:destroot ^ :info:destroot layer2/ObjectVolume.c:695:10: warning: unused variable 'j' [-Wunused-variable] :info:destroot int i, j, ci[] = { :info:destroot ^ :info:destroot layer2/ObjectVolume.c:891:89: warning: '&&' within '||' [-Wlogical-op-parentheses] :info:destroot CShaderPrg_Set1f(shaderPrg, "fogIsSolidColor", bg_gradient || bg_image_filename && bg_image_filename[0] ? 0.f : 1.f); :info:destroot ~~ ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ :info:destroot layer2/ObjectVolume.c:891:89: note: place parentheses around the '&&' expression to silence this warning :info:destroot CShaderPrg_Set1f(shaderPrg, "fogIsSolidColor", bg_gradient || bg_image_filename && bg_image_filename[0] ? 0.f : 1.f); :info:destroot ^ :info:destroot ( ) :info:destroot layer2/ObjectVolume.c:726:8: warning: unused variable 'n' [-Wunused-variable] :info:destroot int *n = NULL; :info:destroot ^ :info:destroot layer2/ObjectVolume.c:1330:9: warning: unused variable 'min_val' [-Wunused-variable] :info:destroot float min_val, max_val; :info:destroot ^ :info:destroot layer2/ObjectVolume.c:1330:18: warning: unused variable 'max_val' [-Wunused-variable] :info:destroot float min_val, max_val; :info:destroot ^ :info:destroot In file included from layer2/ObjectMap.c:42: :info:destroot In file included from /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17: :info:destroot In file included from /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1804: :info:destroot /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] :info:destroot #warning "Using deprecated NumPy API, disable it by " \ :info:destroot ^ :info:destroot layer2/ObjectMap.c:2684:5: warning: implicit declaration of function 'UtilNCopy' is invalid in C99 [-Wimplicit-function-declaration] :info:destroot UtilNCopy(ms->Symmetry->SpaceGroup, space_group_numbers[ispg], WordLength); :info:destroot ^ :info:destroot In file included from layer2/ObjectMap.c:42: :info:destroot In file included from /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:26: :info:destroot /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include/numpy/__multiarray_api.h:1629:1: warning: unused function '_import_array' [-Wunused-function] :info:destroot _import_array(void) :info:destroot ^ :info:destroot 9 warnings generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/RepAngle.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/RepAngle.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/Rep.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/Rep.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/RepCartoon.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/RepCartoon.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/Scene.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/Scene.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot layer1/Scene.c:9193:7: warning: 'gluPerspective' is deprecated: first deprecated in OS X 10.9 - "Use GLKMatrix4MakePerspective" [-Wdeprecated-declarations] :info:destroot gluPerspective(fov, aspRat, I->FrontSafe, I->BackSafe); :info:destroot ^ :info:destroot /System/Library/Frameworks/OpenGL.framework/Headers/glu.h:278:13: note: 'gluPerspective' has been explicitly marked deprecated here :info:destroot extern void gluPerspective (GLdouble fovy, GLdouble aspect, GLdouble zNear, GLdouble zFar) OPENGL_DEPRECATED_MSG(10_0, 10_9, "Use GLKMatrix4MakePerspective"); :info:destroot ^ :info:destroot 3 warnings generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/ObjectMesh.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectMesh.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/RepCylBond.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/RepCylBond.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot layer2/RepCylBond.c:2361:13: warning: unused function 'subdivide' [-Wunused-function] :info:destroot static void subdivide(int n, float *x, float *y) :info:destroot ^ :info:destroot 1 warning generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/ObjectMolecule.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectMolecule.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/RepMesh.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/RepMesh.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot 1 warning generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/RepDihedral.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/RepDihedral.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/RepNonbonded.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/RepNonbonded.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/RepDistDash.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/RepDistDash.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/RepNonbondedSphere.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/RepNonbondedSphere.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/RepDistLabel.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/RepDistLabel.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/RepRibbon.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/RepRibbon.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/RepDot.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/RepDot.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/RepSphere.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/RepSphere.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/RepEllipsoid.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/RepEllipsoid.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/RepLabel.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/RepLabel.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/RepSurface.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/RepSurface.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer3/PlugIOManager.c -o build/temp.macosx-10.10-x86_64-2.7/layer3/PlugIOManager.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot layer2/RepSurface.c:4281:31: warning: unused function 'SurfaceJobAtomInfoVLAFromPyTuple' [-Wunused-function] :info:destroot OV_INLINE SurfaceJobAtomInfo *SurfaceJobAtomInfoVLAFromPyTuple(PyObject * tuple) :info:destroot ^ :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer3/Seeker.c -o build/temp.macosx-10.10-x86_64-2.7/layer3/Seeker.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer3/Selector.c -o build/temp.macosx-10.10-x86_64-2.7/layer3/Selector.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/TypeFace.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/TypeFace.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/View.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/View.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer1/Wizard.c -o build/temp.macosx-10.10-x86_64-2.7/layer1/Wizard.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/AtomInfo.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/AtomInfo.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot 1 warning generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/RepWireBond.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/RepWireBond.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/ObjectMolecule2.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectMolecule2.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/CoordSet.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/CoordSet.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/Sculpt.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/Sculpt.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/DistSet.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/DistSet.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c:43: :info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:706:12: warning: unused function 'symmetry_expand' [-Wunused-function] :info:destroot static int symmetry_expand(qm_atom_t **atoms, int numunique, int natoms, :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:830:13: warning: unused function 'eatline' [-Wunused-function] :info:destroot static void eatline(FILE * fd, int n) :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:841:13: warning: unused function 'eatwhitelines' [-Wunused-function] :info:destroot static void eatwhitelines(FILE *file) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:890:12: warning: unused function 'iswhiteline' [-Wunused-function] :info:destroot static int iswhiteline(char *s) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:896:14: warning: unused function 'strtoupper' [-Wunused-function] :info:destroot static char *strtoupper(char *s) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:957:12: warning: unused function 'goto_keyline' [-Wunused-function] :info:destroot static int goto_keyline(FILE *file, ...) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:1001:12: warning: unused function 'have_keyline' [-Wunused-function] :info:destroot static int have_keyline(FILE *file, const char *keystring1, :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:1072:13: warning: unused function 'thisline' [-Wunused-function] :info:destroot static void thisline(FILE *file) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:1092:13: warning: unused function 'whereami' [-Wunused-function] :info:destroot static void whereami(FILE *file) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:433:18: warning: unused function 'init_qmdata' [-Wunused-function] :info:destroot static qmdata_t* init_qmdata(qmdata_t *data) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:466:27: warning: unused function 'add_wavefunction' [-Wunused-function] :info:destroot static qm_wavefunction_t* add_wavefunction(qm_timestep_t *ts) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:485:13: warning: unused function 'replace_wavefunction' [-Wunused-function] :info:destroot static void replace_wavefunction(qm_timestep_t *ts, int n) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:502:13: warning: unused function 'del_wavefunction' [-Wunused-function] :info:destroot static void del_wavefunction(qm_timestep_t *ts) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:535:13: warning: unused function 'angular_momentum_expon' [-Wunused-function] :info:destroot static void angular_momentum_expon(int *ang_mom_expon, :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:580:13: warning: unused function 'print_matrix4' [-Wunused-function] :info:destroot static void print_matrix4(const float mat[16]) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:1023:12: warning: unused function 'fpexpftoc' [-Wunused-function] :info:destroot static int fpexpftoc(char *ftocstr) { :info:destroot ^ :info:destroot 16 warnings generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/binposplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/SculptCache.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/SculptCache.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/carplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/carplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/corplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/corplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer2/VFont.c -o build/temp.macosx-10.10-x86_64-2.7/layer2/VFont.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/crdplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/crdplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer3/Editor.c -o build/temp.macosx-10.10-x86_64-2.7/layer3/Editor.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c:51: :info:destroot contrib/uiuc/plugins/molfile_plugin/src/fastio.h:468:12: warning: unused function 'fio_read_int32' [-Wunused-function] :info:destroot static int fio_read_int32(fio_fd fd, int *i) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/fastio.h:472:12: warning: unused function 'fio_write_str' [-Wunused-function] :info:destroot static int fio_write_str(fio_fd fd, const char *str) { :info:destroot ^ :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c:60: :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: unused function 'swap2_unaligned' [-Wunused-function] :info:destroot static void swap2_unaligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: unused function 'swap2_aligned' [-Wunused-function] :info:destroot static void swap2_aligned(void *v, long ndata) { :info:destroot ^ :info:destroot 4 warnings generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:160: :info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:890:12: warning: unused function 'iswhiteline' [-Wunused-function] :info:destroot static int iswhiteline(char *s) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:896:14: warning: unused function 'strtoupper' [-Wunused-function] :info:destroot static char *strtoupper(char *s) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:1072:13: warning: unused function 'thisline' [-Wunused-function] :info:destroot static void thisline(FILE *file) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:1092:13: warning: unused function 'whereami' [-Wunused-function] :info:destroot static void whereami(FILE *file) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:580:13: warning: unused function 'print_matrix4' [-Wunused-function] :info:destroot static void print_matrix4(const float mat[16]) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:1023:12: warning: unused function 'fpexpftoc' [-Wunused-function] :info:destroot static int fpexpftoc(char *ftocstr) { :info:destroot ^ :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:162: :info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:95:20: warning: unused function 'get_pte_label' [-Wunused-function] :info:destroot static const char *get_pte_label(const int idx) :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:102:14: warning: unused function 'get_pte_mass' [-Wunused-function] :info:destroot static float get_pte_mass(const int idx) :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:109:14: warning: unused function 'get_pte_vdw_radius' [-Wunused-function] :info:destroot static float get_pte_vdw_radius(const int idx) :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:133:12: warning: unused function 'get_pte_idx' [-Wunused-function] :info:destroot static int get_pte_idx(const char *label) :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:997:13: warning: unused function 'print_input_data' [-Wunused-function] :info:destroot static void print_input_data(qmdata_t *data) { :info:destroot ^ :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer4/Cmd.c -o build/temp.macosx-10.10-x86_64-2.7/layer4/Cmd.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer3/Executive.c -o build/temp.macosx-10.10-x86_64-2.7/layer3/Executive.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c:33: :info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:133:12: warning: unused function 'get_pte_idx' [-Wunused-function] :info:destroot static int get_pte_idx(const char *label) :info:destroot ^ :info:destroot layer4/Cmd.c:5985:29: warning: '&&' within '||' [-Wlogical-op-parentheses] :info:destroot if(ray || !G->HaveGUI && (!SceneGetCopyType(G) || width || height)) { :info:destroot ~~ ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ :info:destroot layer4/Cmd.c:5985:29: note: place parentheses around the '&&' expression to silence this warning :info:destroot if(ray || !G->HaveGUI && (!SceneGetCopyType(G) || width || height)) { :info:destroot ^ :info:destroot ( ) :info:destroot 1 warning generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot layer3/Executive.c:4495:50: warning: data argument not used by format string [-Wformat-extra-args] :info:destroot " GetHistogram-Error: wrong object type.", objName ENDFB(G); :info:destroot ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ^ :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/psfplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot layer3/Executive.c:5898:19: warning: incompatible pointer to integer conversion assigning to 'int' from 'CSymmetry *' [-Wint-conversion] :info:destroot ok_assert(1, ok = symmetry); :info:destroot ^ ~~~~~~~~ :info:destroot layer0/Err.h:32:31: note: expanded from macro 'ok_assert' :info:destroot #define ok_assert(x, c) {if(!(c)) ok_raise(x);} :info:destroot ^ :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c:29: :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/fortread.h:28: :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: unused function 'swap2_unaligned' [-Wunused-function] :info:destroot static void swap2_unaligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: unused function 'swap4_unaligned' [-Wunused-function] :info:destroot static void swap4_unaligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: unused function 'swap8_unaligned' [-Wunused-function] :info:destroot static void swap8_unaligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: unused function 'swap2_aligned' [-Wunused-function] :info:destroot static void swap2_aligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: unused function 'swap8_aligned' [-Wunused-function] :info:destroot static void swap8_aligned(void *v, long ndata) { :info:destroot ^ :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c:29: :info:destroot contrib/uiuc/plugins/molfile_plugin/src/fortread.h:36:12: warning: unused function 'fort_eat_recmark' [-Wunused-function] :info:destroot static int fort_eat_recmark(FILE *ifp, int recmarklen) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/fortread.h:55:12: warning: unused function 'fort_get_endian_reclen' [-Wunused-function] :info:destroot static int fort_get_endian_reclen(int reclen, int word0, int word1, :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/fortread.h:103:12: warning: unused function 'fortread_4' [-Wunused-function] :info:destroot static int fortread_4(void *dest, int n, int swap, FILE *fd) { :info:destroot ^ :info:destroot 8 warnings generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c:42: :info:destroot contrib/uiuc/plugins/molfile_plugin/src/vaspplugin.h:111:13: warning: unused function 'vasp_timestep_unitcell' [-Wunused-function] :info:destroot static void vasp_timestep_unitcell(molfile_timestep_t *ts, vasp_plugindata_t *data) :info:destroot ^ :info:destroot 11 warnings generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/hash.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/hash.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/jsplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot 1 warning generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c:403:16: warning: unused variable 'bszmask' [-Wunused-variable] :info:destroot fio_size_t bszmask; :info:destroot ^ :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c:87: :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/hash.h:37: :info:destroot contrib/uiuc/plugins/molfile_plugin/src/hash.c:183:21: warning: unused function 'hash_delete' [-Wunused-function] :info:destroot VMDEXTERNSTATIC int hash_delete(hash_t *tptr, const char *key) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/hash.c:270:24: warning: unused function 'hash_stats' [-Wunused-function] :info:destroot VMDEXTERNSTATIC char * hash_stats(hash_t *tptr) { :info:destroot ^ :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c:88: :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: unused function 'swap2_unaligned' [-Wunused-function] :info:destroot static void swap2_unaligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: unused function 'swap4_unaligned' [-Wunused-function] :info:destroot static void swap4_unaligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: unused function 'swap8_unaligned' [-Wunused-function] :info:destroot static void swap8_unaligned(void *v, long ndata) { :info:destroot ^ :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c:41: :info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: unused function 'get_pte_idx_from_string' [-Wunused-function] :info:destroot static int get_pte_idx_from_string(const char *label) { :info:destroot ^ :info:destroot 1 warning generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c:42: :info:destroot contrib/uiuc/plugins/molfile_plugin/src/vaspplugin.h:111:13: warning: unused function 'vasp_timestep_unitcell' [-Wunused-function] :info:destroot static void vasp_timestep_unitcell(molfile_timestep_t *ts, vasp_plugindata_t *data) :info:destroot ^ :info:destroot 1 warning generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c:41: :info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: unused function 'get_pte_idx_from_string' [-Wunused-function] :info:destroot static int get_pte_idx_from_string(const char *label) { :info:destroot ^ :info:destroot 1 warning generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c:41: :info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: unused function 'get_pte_idx_from_string' [-Wunused-function] :info:destroot static int get_pte_idx_from_string(const char *label) { :info:destroot ^ :info:destroot 6 warnings generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot 1 warning generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c:82:23: warning: expression which evaluates to zero treated as a null pointer constant of type 'char *' [-Wnon-literal-null-conversion] :info:destroot if (end) end = '\0'; :info:destroot ^~~~ :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c:48: :info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: unused function 'get_pte_idx_from_string' [-Wunused-function] :info:destroot static int get_pte_idx_from_string(const char *label) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c:828:7: warning: unused variable 's_expon' [-Wunused-variable] :info:destroot char s_expon[128], s_coeff1[128], s_coeff2[128]; :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c:828:21: warning: unused variable 's_coeff1' [-Wunused-variable] :info:destroot char s_expon[128], s_coeff1[128], s_coeff2[128]; :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c:828:36: warning: unused variable 's_coeff2' [-Wunused-variable] :info:destroot char s_expon[128], s_coeff1[128], s_coeff2[128]; :info:destroot ^ :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c:37: :info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:95:20: warning: unused function 'get_pte_label' [-Wunused-function] :info:destroot static const char *get_pte_label(const int idx) :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:102:14: warning: unused function 'get_pte_mass' [-Wunused-function] :info:destroot static float get_pte_mass(const int idx) :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:109:14: warning: unused function 'get_pte_vdw_radius' [-Wunused-function] :info:destroot static float get_pte_vdw_radius(const int idx) :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:133:12: warning: unused function 'get_pte_idx' [-Wunused-function] :info:destroot static int get_pte_idx(const char *label) :info:destroot ^ :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c:38: :info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:706:12: warning: unused function 'symmetry_expand' [-Wunused-function] :info:destroot static int symmetry_expand(qm_atom_t **atoms, int numunique, int natoms, :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:1001:12: warning: unused function 'have_keyline' [-Wunused-function] :info:destroot static int have_keyline(FILE *file, const char *keystring1, :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:1072:13: warning: unused function 'thisline' [-Wunused-function] :info:destroot static void thisline(FILE *file) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:1092:13: warning: unused function 'whereami' [-Wunused-function] :info:destroot static void whereami(FILE *file) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:485:13: warning: unused function 'replace_wavefunction' [-Wunused-function] :info:destroot static void replace_wavefunction(qm_timestep_t *ts, int n) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:502:13: warning: unused function 'del_wavefunction' [-Wunused-function] :info:destroot static void del_wavefunction(qm_timestep_t *ts) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:580:13: warning: unused function 'print_matrix4' [-Wunused-function] :info:destroot static void print_matrix4(const float mat[16]) { :info:destroot ^ :info:destroot 2 warnings generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c:57: :info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: unused function 'get_pte_idx_from_string' [-Wunused-function] :info:destroot static int get_pte_idx_from_string(const char *label) { :info:destroot ^ :info:destroot 1 warning generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/avsplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/avsplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot 14 warnings generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp:47: :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: unused function 'swap2_unaligned' [-Wunused-function] :info:destroot static void swap2_unaligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: unused function 'swap4_unaligned' [-Wunused-function] :info:destroot static void swap4_unaligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: unused function 'swap8_unaligned' [-Wunused-function] :info:destroot static void swap8_unaligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: unused function 'swap2_aligned' [-Wunused-function] :info:destroot static void swap2_aligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: unused function 'swap8_aligned' [-Wunused-function] :info:destroot static void swap8_aligned(void *v, long ndata) { :info:destroot ^ :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp:48: :info:destroot contrib/uiuc/plugins/molfile_plugin/src/fortread.h:36:12: warning: unused function 'fort_eat_recmark' [-Wunused-function] :info:destroot static int fort_eat_recmark(FILE *ifp, int recmarklen) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/fortread.h:55:12: warning: unused function 'fort_get_endian_reclen' [-Wunused-function] :info:destroot static int fort_get_endian_reclen(int reclen, int word0, int word1, :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/fortread.h:133:13: warning: unused function 'strnwscpy' [-Wunused-function] :info:destroot static void strnwscpy(char *target, const char *source, const int len) { :info:destroot ^ :info:destroot 1 warning generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer4/Export.c -o build/temp.macosx-10.10-x86_64-2.7/layer4/Export.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot 8 warnings generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/graspplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:40: :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: unused function 'swap2_unaligned' [-Wunused-function] :info:destroot static void swap2_unaligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: unused function 'swap4_unaligned' [-Wunused-function] :info:destroot static void swap4_unaligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: unused function 'swap8_unaligned' [-Wunused-function] :info:destroot static void swap8_unaligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: unused function 'swap8_aligned' [-Wunused-function] :info:destroot static void swap8_aligned(void *v, long ndata) { :info:destroot ^ :info:destroot 4 warnings generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/grdplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/grdplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer4/Menu.c -o build/temp.macosx-10.10-x86_64-2.7/layer4/Menu.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/grdplugin.cpp:51: :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: unused function 'swap2_unaligned' [-Wunused-function] :info:destroot static void swap2_unaligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: unused function 'swap4_unaligned' [-Wunused-function] :info:destroot static void swap4_unaligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: unused function 'swap8_unaligned' [-Wunused-function] :info:destroot static void swap8_unaligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: unused function 'swap2_aligned' [-Wunused-function] :info:destroot static void swap2_aligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: unused function 'swap8_aligned' [-Wunused-function] :info:destroot static void swap8_aligned(void *v, long ndata) { :info:destroot ^ :info:destroot 5 warnings generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/gridplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp:59: :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: unused function 'swap2_unaligned' [-Wunused-function] :info:destroot static void swap2_unaligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: unused function 'swap4_unaligned' [-Wunused-function] :info:destroot static void swap4_unaligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: unused function 'swap8_unaligned' [-Wunused-function] :info:destroot static void swap8_unaligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: unused function 'swap2_aligned' [-Wunused-function] :info:destroot static void swap2_aligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: unused function 'swap8_aligned' [-Wunused-function] :info:destroot static void swap8_aligned(void *v, long ndata) { :info:destroot ^ :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp:60: :info:destroot contrib/uiuc/plugins/molfile_plugin/src/fortread.h:36:12: warning: unused function 'fort_eat_recmark' [-Wunused-function] :info:destroot static int fort_eat_recmark(FILE *ifp, int recmarklen) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/fortread.h:55:12: warning: unused function 'fort_get_endian_reclen' [-Wunused-function] :info:destroot static int fort_get_endian_reclen(int reclen, int word0, int word1, :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/fortread.h:133:13: warning: unused function 'strnwscpy' [-Wunused-function] :info:destroot static void strnwscpy(char *target, const char *source, const int len) { :info:destroot ^ :info:destroot 8 warnings generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer4/PopUp.c -o build/temp.macosx-10.10-x86_64-2.7/layer4/PopUp.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/brixplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp:30: :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h:48: :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: unused function 'swap2_unaligned' [-Wunused-function] :info:destroot static void swap2_unaligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: unused function 'swap4_unaligned' [-Wunused-function] :info:destroot static void swap4_unaligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: unused function 'swap8_unaligned' [-Wunused-function] :info:destroot static void swap8_unaligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: unused function 'swap2_aligned' [-Wunused-function] :info:destroot static void swap2_aligned(void *v, long ndata) { :info:destroot ^ :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp:44: :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: unused function 'swap2_unaligned' [-Wunused-function] :info:destroot static void swap2_unaligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: unused function 'swap4_unaligned' [-Wunused-function] :info:destroot static void swap4_unaligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: unused function 'swap8_unaligned' [-Wunused-function] :info:destroot static void swap8_unaligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: unused function 'swap2_aligned' [-Wunused-function] :info:destroot static void swap2_aligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: unused function 'swap8_aligned' [-Wunused-function] :info:destroot static void swap8_aligned(void *v, long ndata) { :info:destroot ^ :info:destroot 5 warnings generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:42: :info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:133:12: warning: unused function 'get_pte_idx' [-Wunused-function] :info:destroot static int get_pte_idx(const char *label) :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: unused function 'get_pte_idx_from_string' [-Wunused-function] :info:destroot static int get_pte_idx_from_string(const char *label) { :info:destroot ^ :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer5/main.c -o build/temp.macosx-10.10-x86_64-2.7/layer5/main.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot 2 warnings generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp:63: :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: unused function 'swap4_unaligned' [-Wunused-function] :info:destroot static void swap4_unaligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: unused function 'swap8_unaligned' [-Wunused-function] :info:destroot static void swap8_unaligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:110:13: warning: unused function 'swap4_aligned' [-Wunused-function] :info:destroot static void swap4_aligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: unused function 'swap8_aligned' [-Wunused-function] :info:destroot static void swap8_aligned(void *v, long ndata) { :info:destroot ^ :info:destroot 4 warnings generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot 4 warnings generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer5/PyMOL.c -o build/temp.macosx-10.10-x86_64-2.7/layer5/PyMOL.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot layer5/PyMOL.c:959:37: warning: unused function 'return_status' [-Wunused-function] :info:destroot CC_INLINE static PyMOLreturn_status return_status(int status) :info:destroot ^ :info:destroot 2 warnings generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/parmplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp:53: :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: unused function 'swap2_unaligned' [-Wunused-function] :info:destroot static void swap2_unaligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: unused function 'swap4_unaligned' [-Wunused-function] :info:destroot static void swap4_unaligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: unused function 'swap8_unaligned' [-Wunused-function] :info:destroot static void swap8_unaligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: unused function 'swap2_aligned' [-Wunused-function] :info:destroot static void swap2_aligned(void *v, long ndata) { :info:destroot ^ :info:destroot 4 warnings generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/phiplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/pltplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp:42: :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: unused function 'swap2_unaligned' [-Wunused-function] :info:destroot static void swap2_unaligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: unused function 'swap4_unaligned' [-Wunused-function] :info:destroot static void swap4_unaligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: unused function 'swap8_unaligned' [-Wunused-function] :info:destroot static void swap8_unaligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: unused function 'swap2_aligned' [-Wunused-function] :info:destroot static void swap2_aligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: unused function 'swap8_aligned' [-Wunused-function] :info:destroot static void swap8_aligned(void *v, long ndata) { :info:destroot ^ :info:destroot 5 warnings generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/situsplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:680:44: warning: field 'eno' is uninitialized when used here [-Wuninitialized] :info:destroot : std::runtime_error(text + strerror(eno)), eno(_eno){} :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp:1883:9: warning: unused variable 'last_ctnumber' [-Wunused-variable] :info:destroot int last_ctnumber = -1; :info:destroot ^ :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp:277:10: warning: unused variable 'y' [-Wunused-variable] :info:destroot int x, y, z, xsize, ysize, zsize, xysize, total; :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp:277:13: warning: unused variable 'z' [-Wunused-variable] :info:destroot int x, y, z, xsize, ysize, zsize, xysize, total; :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp:277:7: warning: unused variable 'x' [-Wunused-variable] :info:destroot int x, y, z, xsize, ysize, zsize, xysize, total; :info:destroot ^ :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp:36: :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: unused function 'swap2_unaligned' [-Wunused-function] :info:destroot static void swap2_unaligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: unused function 'swap4_unaligned' [-Wunused-function] :info:destroot static void swap4_unaligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: unused function 'swap8_unaligned' [-Wunused-function] :info:destroot static void swap8_unaligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: unused function 'swap2_aligned' [-Wunused-function] :info:destroot static void swap2_aligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: unused function 'swap8_aligned' [-Wunused-function] :info:destroot static void swap8_aligned(void *v, long ndata) { :info:destroot ^ :info:destroot 8 warnings generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/stlplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:70: :info:destroot contrib/uiuc/plugins/molfile_plugin/src/vmddir.h:137:12: warning: unused function 'vmd_file_is_executable' [-Wunused-function] :info:destroot static int vmd_file_is_executable(const char * filename) { :info:destroot ^ :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:71: :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: unused function 'swap2_unaligned' [-Wunused-function] :info:destroot static void swap2_unaligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: unused function 'swap2_aligned' [-Wunused-function] :info:destroot static void swap2_aligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:110:13: warning: unused function 'swap4_aligned' [-Wunused-function] :info:destroot static void swap4_aligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: unused function 'swap8_aligned' [-Wunused-function] :info:destroot static void swap8_aligned(void *v, long ndata) { :info:destroot ^ :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp:47: :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: unused function 'swap2_unaligned' [-Wunused-function] :info:destroot static void swap2_unaligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: unused function 'swap8_unaligned' [-Wunused-function] :info:destroot static void swap8_unaligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: unused function 'swap2_aligned' [-Wunused-function] :info:destroot static void swap2_aligned(void *v, long ndata) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: unused function 'swap8_aligned' [-Wunused-function] :info:destroot static void swap8_aligned(void *v, long ndata) { :info:destroot ^ :info:destroot 4 warnings generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot 1 warning generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c layer5/TestPyMOL.c -o build/temp.macosx-10.10-x86_64-2.7/layer5/TestPyMOL.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c modules/cealign/src/ccealignmodule.cpp -o build/temp.macosx-10.10-x86_64-2.7/modules/cealign/src/ccealignmodule.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:37: :info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: unused function 'get_pte_idx_from_string' [-Wunused-function] :info:destroot static int get_pte_idx_from_string(const char *label) { :info:destroot ^ :info:destroot 1 warning generated. :info:destroot In file included from modules/cealign/src/ccealignmodule.cpp:32: :info:destroot In file included from modules/cealign/src/ccealignmodule.H:37: :info:destroot In file included from modules/cealign/src/tnt/tnt.h:43: :info:destroot modules/cealign/src/tnt/tnt_matrix.h:549:15: warning: unused variable 'N' [-Wunused-variable] :info:destroot Subscript N = A.num_cols(); :info:destroot ^ :info:destroot 1 warning generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c build/generated/ShaderText.c -o build/temp.macosx-10.10-x86_64-2.7/build/generated/ShaderText.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot 6 warnings generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/dxplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/dxplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/edmplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp:220:7: warning: unused variable 'leftover' [-Wunused-variable] :info:destroot int leftover = (nperslice - (nlines - 1) * 6); :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp:207:10: warning: unused variable 'l' [-Wunused-variable] :info:destroot int z, l, sentinel, convcnt; :info:destroot ^ :info:destroot 1 warning generated. :info:destroot 2 warnings generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/mapplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp:135:7: warning: unused variable 'retval' [-Wunused-variable] :info:destroot int retval; :info:destroot ^ :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp:45: :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/hash.h:37: :info:destroot contrib/uiuc/plugins/molfile_plugin/src/hash.c:183:21: warning: unused function 'hash_delete' [-Wunused-function] :info:destroot VMDEXTERNSTATIC int hash_delete(hash_t *tptr, const char *key) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/hash.c:270:24: warning: unused function 'hash_stats' [-Wunused-function] :info:destroot VMDEXTERNSTATIC char * hash_stats(hash_t *tptr) { :info:destroot ^ :info:destroot 3 warnings generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/mmcif.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/mmcif.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot contrib/uiuc/plugins/molfile_plugin/src/mmcif.cpp:85:14: warning: unused variable 'data' [-Wunused-variable] :info:destroot mmcifdata *data = (mmcifdata *)mydata; :info:destroot ^ :info:destroot In file included from contrib/uiuc/plugins/molfile_plugin/src/mmcif.cpp:64: :info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:95:20: warning: unused function 'get_pte_label' [-Wunused-function] :info:destroot static const char *get_pte_label(const int idx) :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:102:14: warning: unused function 'get_pte_mass' [-Wunused-function] :info:destroot static float get_pte_mass(const int idx) :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:109:14: warning: unused function 'get_pte_vdw_radius' [-Wunused-function] :info:destroot static float get_pte_vdw_radius(const int idx) :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:133:12: warning: unused function 'get_pte_idx' [-Wunused-function] :info:destroot static int get_pte_idx(const char *label) :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: unused function 'get_pte_idx_from_string' [-Wunused-function] :info:destroot static int get_pte_idx_from_string(const char *label) { :info:destroot ^ :info:destroot contrib/uiuc/plugins/molfile_plugin/src/mmcif.cpp:98:14: warning: unused function 'open_mmcif_write' [-Wunused-function] :info:destroot static void *open_mmcif_write(const char *filename, const char *filetype, :info:destroot ^ :info:destroot 7 warnings generated. :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -D_PYMOL_LIBPNG -D_PYMOL_INLINE -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_PYMOL_GL_CALLLISTS -D_PYMOL_VMD_PLUGINS -D_PYMOL_FREETYPE -DNO_MMLIBS -D_CGO_DRAWARRAYS -DOPENGL_ES_2 -D_PYMOL_NUMPY -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Imodules/cealign/src -Imodules/cealign/src/tnt -Ibuild/generated -Icontrib/uiuc/plugins/include -Icontrib/uiuc/plugins/molfile_plugin/src -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/core/include -I/opt/local/include -I/opt/local/include/freetype2 -I/usr/include -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp -o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.o -ffast-math -funroll-loops -O3 -g -fcommon :info:destroot /usr/bin/clang++ -bundle -undefined dynamic_lookup -L/opt/local/lib -Wl,-headerpad_max_install_names -L/opt/local/lib/db48 build/temp.macosx-10.10-x86_64-2.7/ov/src/ov_utility.o build/temp.macosx-10.10-x86_64-2.7/ov/src/OVContext.o build/temp.macosx-10.10-x86_64-2.7/ov/src/OVHeap.o build/temp.macosx-10.10-x86_64-2.7/ov/src/OVHeapArray.o build/temp.macosx-10.10-x86_64-2.7/ov/src/OVLexicon.o build/temp.macosx-10.10-x86_64-2.7/ov/src/OVOneToAny.o build/temp.macosx-10.10-x86_64-2.7/ov/src/OVOneToOne.o build/temp.macosx-10.10-x86_64-2.7/ov/src/OVRandom.o build/temp.macosx-10.10-x86_64-2.7/layer0/Block.o build/temp.macosx-10.10-x86_64-2.7/layer0/Crystal.o build/temp.macosx-10.10-x86_64-2.7/layer0/Debug.o build/temp.macosx-10.10-x86_64-2.7/layer0/Deferred.o build/temp.macosx-10.10-x86_64-2.7/layer0/Err.o build/temp.macosx-10.10-x86_64-2.7/layer0/Feedback.o build/temp.macosx-10.10-x86_64-2.7/layer0/Field.o build/temp.macosx-10.10-x86_64-2.7/layer0/Isosurf.o build/temp.macosx-10.10-x86_64-2.7/layer0/Map.o build/temp.macosx-10.10-x86_64-2.7/layer0/Match.o build/temp.macosx-10.10-x86_64-2.7/layer0/Matrix.o build/temp.macosx-10.10-x86_64-2.7/layer0/MemoryCache.o build/temp.macosx-10.10-x86_64-2.7/layer0/MemoryDebug.o build/temp.macosx-10.10-x86_64-2.7/layer0/MyPNG.o build/temp.macosx-10.10-x86_64-2.7/layer0/os_gl.o build/temp.macosx-10.10-x86_64-2.7/layer0/Parse.o build/temp.macosx-10.10-x86_64-2.7/layer0/Pixmap.o build/temp.macosx-10.10-x86_64-2.7/layer0/Queue.o build/temp.macosx-10.10-x86_64-2.7/layer0/Raw.o build/temp.macosx-10.10-x86_64-2.7/layer0/ShaderMgr.o build/temp.macosx-10.10-x86_64-2.7/layer0/Sphere.o build/temp.macosx-10.10-x86_64-2.7/layer0/Tetsurf.o build/temp.macosx-10.10-x86_64-2.7/layer0/Texture.o build/temp.macosx-10.10-x86_64-2.7/layer0/Tracker.o build/temp.macosx-10.10-x86_64-2.7/layer0/Triangle.o build/temp.macosx-10.10-x86_64-2.7/layer0/Util.o build/temp.macosx-10.10-x86_64-2.7/layer0/Vector.o build/temp.macosx-10.10-x86_64-2.7/layer0/Word.o build/temp.macosx-10.10-x86_64-2.7/layer1/Basis.o build/temp.macosx-10.10-x86_64-2.7/layer1/ButMode.o build/temp.macosx-10.10-x86_64-2.7/layer1/CGO.o build/temp.macosx-10.10-x86_64-2.7/layer1/Character.o build/temp.macosx-10.10-x86_64-2.7/layer1/Color.o build/temp.macosx-10.10-x86_64-2.7/layer1/Control.o build/temp.macosx-10.10-x86_64-2.7/layer1/Extrude.o build/temp.macosx-10.10-x86_64-2.7/layer1/Font.o build/temp.macosx-10.10-x86_64-2.7/layer1/FontGLUT.o build/temp.macosx-10.10-x86_64-2.7/layer1/FontGLUT8x13.o build/temp.macosx-10.10-x86_64-2.7/layer1/FontGLUT9x15.o build/temp.macosx-10.10-x86_64-2.7/layer1/FontGLUTHel10.o build/temp.macosx-10.10-x86_64-2.7/layer1/FontGLUTHel12.o build/temp.macosx-10.10-x86_64-2.7/layer1/FontGLUTHel18.o build/temp.macosx-10.10-x86_64-2.7/layer1/FontType.o build/temp.macosx-10.10-x86_64-2.7/layer1/Movie.o build/temp.macosx-10.10-x86_64-2.7/layer1/Ortho.o build/temp.macosx-10.10-x86_64-2.7/layer1/P.o build/temp.macosx-10.10-x86_64-2.7/layer1/PConv.o build/temp.macosx-10.10-x86_64-2.7/layer1/Pop.o build/temp.macosx-10.10-x86_64-2.7/layer1/PyMOLObject.o build/temp.macosx-10.10-x86_64-2.7/layer1/Ray.o build/temp.macosx-10.10-x86_64-2.7/layer1/Rep.o build/temp.macosx-10.10-x86_64-2.7/layer1/Scene.o build/temp.macosx-10.10-x86_64-2.7/layer1/ScrollBar.o build/temp.macosx-10.10-x86_64-2.7/layer1/Seq.o build/temp.macosx-10.10-x86_64-2.7/layer1/Setting.o build/temp.macosx-10.10-x86_64-2.7/layer1/Shaker.o build/temp.macosx-10.10-x86_64-2.7/layer1/Symmetry.o build/temp.macosx-10.10-x86_64-2.7/layer1/Text.o build/temp.macosx-10.10-x86_64-2.7/layer1/TypeFace.o build/temp.macosx-10.10-x86_64-2.7/layer1/View.o build/temp.macosx-10.10-x86_64-2.7/layer1/Wizard.o build/temp.macosx-10.10-x86_64-2.7/layer2/AtomInfo.o build/temp.macosx-10.10-x86_64-2.7/layer2/CoordSet.o build/temp.macosx-10.10-x86_64-2.7/layer2/DistSet.o build/temp.macosx-10.10-x86_64-2.7/layer2/GadgetSet.o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectAlignment.o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectCallback.o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectCGO.o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectDist.o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectGadget.o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectGadgetRamp.o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectGroup.o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectMap.o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectMesh.o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectMolecule.o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectMolecule2.o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectSlice.o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectSurface.o build/temp.macosx-10.10-x86_64-2.7/layer2/ObjectVolume.o build/temp.macosx-10.10-x86_64-2.7/layer2/RepAngle.o build/temp.macosx-10.10-x86_64-2.7/layer2/RepCartoon.o build/temp.macosx-10.10-x86_64-2.7/layer2/RepCylBond.o build/temp.macosx-10.10-x86_64-2.7/layer2/RepDihedral.o build/temp.macosx-10.10-x86_64-2.7/layer2/RepDistDash.o build/temp.macosx-10.10-x86_64-2.7/layer2/RepDistLabel.o build/temp.macosx-10.10-x86_64-2.7/layer2/RepDot.o build/temp.macosx-10.10-x86_64-2.7/layer2/RepEllipsoid.o build/temp.macosx-10.10-x86_64-2.7/layer2/RepLabel.o build/temp.macosx-10.10-x86_64-2.7/layer2/RepMesh.o build/temp.macosx-10.10-x86_64-2.7/layer2/RepNonbonded.o build/temp.macosx-10.10-x86_64-2.7/layer2/RepNonbondedSphere.o build/temp.macosx-10.10-x86_64-2.7/layer2/RepRibbon.o build/temp.macosx-10.10-x86_64-2.7/layer2/RepSphere.o build/temp.macosx-10.10-x86_64-2.7/layer2/RepSurface.o build/temp.macosx-10.10-x86_64-2.7/layer2/RepWireBond.o build/temp.macosx-10.10-x86_64-2.7/layer2/Sculpt.o build/temp.macosx-10.10-x86_64-2.7/layer2/SculptCache.o build/temp.macosx-10.10-x86_64-2.7/layer2/VFont.o build/temp.macosx-10.10-x86_64-2.7/layer3/Editor.o build/temp.macosx-10.10-x86_64-2.7/layer3/Executive.o build/temp.macosx-10.10-x86_64-2.7/layer3/PlugIOManager.o build/temp.macosx-10.10-x86_64-2.7/layer3/Seeker.o build/temp.macosx-10.10-x86_64-2.7/layer3/Selector.o build/temp.macosx-10.10-x86_64-2.7/layer4/Cmd.o build/temp.macosx-10.10-x86_64-2.7/layer4/Export.o build/temp.macosx-10.10-x86_64-2.7/layer4/Menu.o build/temp.macosx-10.10-x86_64-2.7/layer4/PopUp.o build/temp.macosx-10.10-x86_64-2.7/layer5/main.o build/temp.macosx-10.10-x86_64-2.7/layer5/PyMOL.o build/temp.macosx-10.10-x86_64-2.7/layer5/TestPyMOL.o build/temp.macosx-10.10-x86_64-2.7/modules/cealign/src/ccealignmodule.o build/temp.macosx-10.10-x86_64-2.7/build/generated/ShaderText.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/binposplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/carplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/corplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/crdplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/hash.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/jsplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/psfplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/avsplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/brixplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/dxplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/edmplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/graspplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/grdplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/gridplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/mapplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/mmcif.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/parmplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/phiplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/pltplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/situsplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/stlplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.o build/temp.macosx-10.10-x86_64-2.7/contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.o -L/opt/local/lib -L/usr/lib -lpng -lfreetype -lGLEW -lGL -lGLU -lglut -o build/lib.macosx-10.10-x86_64-2.7/pymol/_cmd.so :info:destroot building 'chempy.champ._champ' extension :info:destroot creating build/temp.macosx-10.10-x86_64-2.7/contrib/champ :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Icontrib/champ -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/champ/champ_module.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/champ/champ_module.o :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Icontrib/champ -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/champ/chiral.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/champ/chiral.o :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Icontrib/champ -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/champ/err2.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/champ/err2.o :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Icontrib/champ -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/champ/champ.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/champ/champ.o :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Icontrib/champ -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/champ/feedback2.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/champ/feedback2.o :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Icontrib/champ -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/champ/list.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/champ/list.o :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Icontrib/champ -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/champ/os_memory.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/champ/os_memory.o :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Icontrib/champ -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/champ/sort.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/champ/sort.o :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Icontrib/champ -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/champ/strblock.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/champ/strblock.o :info:destroot /usr/bin/clang -fno-strict-aliasing -fno-common -dynamic -pipe -Os -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -Icontrib/champ -I/opt/local/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c contrib/champ/vla.c -o build/temp.macosx-10.10-x86_64-2.7/contrib/champ/vla.o :info:destroot /usr/bin/clang -bundle -undefined dynamic_lookup -L/opt/local/lib -Wl,-headerpad_max_install_names -L/opt/local/lib/db48 build/temp.macosx-10.10-x86_64-2.7/contrib/champ/champ.o build/temp.macosx-10.10-x86_64-2.7/contrib/champ/champ_module.o build/temp.macosx-10.10-x86_64-2.7/contrib/champ/chiral.o build/temp.macosx-10.10-x86_64-2.7/contrib/champ/err2.o build/temp.macosx-10.10-x86_64-2.7/contrib/champ/feedback2.o build/temp.macosx-10.10-x86_64-2.7/contrib/champ/list.o build/temp.macosx-10.10-x86_64-2.7/contrib/champ/os_memory.o build/temp.macosx-10.10-x86_64-2.7/contrib/champ/sort.o build/temp.macosx-10.10-x86_64-2.7/contrib/champ/strblock.o build/temp.macosx-10.10-x86_64-2.7/contrib/champ/vla.o -o build/lib.macosx-10.10-x86_64-2.7/chempy/champ/_champ.so :info:destroot running install_lib :info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework :info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions :info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7 :info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib :info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7 :info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages :info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/arc.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy :info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/bmin :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/bmin/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/bmin :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/bmin/commands.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/bmin :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/bmin/realtime.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/bmin :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/bmin/state.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/bmin :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/bmin/util.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/bmin :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/bond_amber.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/bond_mmff.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/bonds.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/brick.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/cc1.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/cex.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy :info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/champ :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/champ/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/champ :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/champ/_champ.so -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/champ :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/champ/amber99.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/champ :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/champ/assign.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/champ :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/champ/formal_charges.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/champ :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/charge.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/cif.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/cpv.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/dictdb.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy :info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/fast :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/fast/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/fast :info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/fragments :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/fragments/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/fragments :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/gamess1.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/gms.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/hetatm.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/io.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/lst.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/mae.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/map.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/mass.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/mmd.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/models.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/mol.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/mol2.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/neighbor.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/pdb.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/pkl.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/place.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/protein.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/protein_amber.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/protein_amber99.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/protein_mmff.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/protein_residues.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/sdf.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/solvate.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy :info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/tinker :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/tinker/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/tinker :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/tinker/amber.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/tinker :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/tinker/keyword.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/tinker :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/tinker/realtime.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/tinker :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/tinker/state.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/tinker :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/water_amber.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/water_residues.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/chempy/xyz.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy :info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pmg_tk/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pmg_tk/ColorEditor.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pmg_tk/Demo.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pmg_tk/PMGApp.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pmg_tk/PyMOLMapLoad.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pmg_tk/SetEditor.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pmg_tk/Setting.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk :info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/skins :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pmg_tk/skins/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/skins :info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/skins/demo :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pmg_tk/skins/demo/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/skins/demo :info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/skins/normal :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pmg_tk/skins/normal/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/skins/normal :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pmg_tk/skins/normal/builder.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/skins/normal :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pmg_tk/skins/normal/ModalWindow.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/skins/normal :info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/startup :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pmg_tk/startup/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/startup :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pmg_tk/startup/apbs_tools.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/startup :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pmg_tk/startup/remote_pdb_load.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/startup :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pmg_tk/TextEditor.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pmg_tk/volume.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk :info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_wx :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pmg_wx/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_wx :info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/_cmd.so -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/api.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/callback.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/cgo.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/checking.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/cmd.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/colorramping.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/commanding.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/completing.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/computing.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/constants.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/constants_palette.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/contrib :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/contrib/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/contrib :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/controlling.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/creating.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/editing.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/editor.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/embed :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/embed/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/embed :info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/embed/epymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/embed/epymol/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/embed/epymol :info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/embed/wxpymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/embed/wxpymol/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/embed/wxpymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/experimenting.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/exporting.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/externing.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/feedingback.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/fitting.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/gui.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/headering.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/helping.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/importing.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/internal.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/invocation.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/keyboard.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/keywords.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/locking.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/m4x.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/menu.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/monitoring.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/movie.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/moving.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/opengl :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/opengl/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/opengl :info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/opengl/gl :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/opengl/gl/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/opengl/gl :info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/opengl/glu :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/opengl/glu/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/opengl/glu :info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/opengl/glut :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/opengl/glut/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/opengl/glut :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/parser.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/parsing.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/plugins :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/plugins/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/plugins :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/plugins/installation.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/plugins :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/plugins/legacysupport.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/plugins :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/plugins/managergui.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/plugins :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/plugins/repository.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/plugins :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/povray.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/preset.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/querying.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/rpc.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/selecting.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/selector.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/setting.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/shortcut.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/util.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/vfont.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/viewing.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/annotation.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/appearance.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/benchmark.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/box.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/charge.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/cleanup.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/demo.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/density.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/distance.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/dragging.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/fedora.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/filter.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/label.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/measurement.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/message.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/mutagenesis.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/pair_fit.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/pseudoatom.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/renaming.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/sculpting.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/security.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/stereodemo.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizard/toggle.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/wizarding.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/xray.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol/xwin.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol :info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol2 :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol2/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol2 :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol2/cmd2.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol2 :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/pymol2/make_cmd2.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol2 :info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/web :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/web/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/web :info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/web/examples :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/web/examples/__init__.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/web/examples :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/web/examples/justhttpd.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/web/examples :info:destroot copying build/lib.macosx-10.10-x86_64-2.7/web/pymolhttpd.py -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/web :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/__init__.py to __init__.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/arc.py to arc.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/bmin/__init__.py to __init__.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/bmin/commands.py to commands.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/bmin/realtime.py to realtime.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/bmin/state.py to state.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/bmin/util.py to util.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/bond_amber.py to bond_amber.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/bond_mmff.py to bond_mmff.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/bonds.py to bonds.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/brick.py to brick.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/cc1.py to cc1.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/cex.py to cex.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/champ/__init__.py to __init__.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/champ/amber99.py to amber99.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/champ/assign.py to assign.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/champ/formal_charges.py to formal_charges.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/charge.py to charge.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/cif.py to cif.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/cpv.py to cpv.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/dictdb.py to dictdb.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/fast/__init__.py to __init__.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/fragments/__init__.py to __init__.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/gamess1.py to gamess1.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/gms.py to gms.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/hetatm.py to hetatm.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/io.py to io.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/lst.py to lst.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/mae.py to mae.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/map.py to map.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/mass.py to mass.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/mmd.py to mmd.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/models.py to models.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/mol.py to mol.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/mol2.py to mol2.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/neighbor.py to neighbor.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/pdb.py to pdb.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/pkl.py to pkl.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/place.py to place.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/protein.py to protein.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/protein_amber.py to protein_amber.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/protein_amber99.py to protein_amber99.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/protein_mmff.py to protein_mmff.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/protein_residues.py to protein_residues.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/sdf.py to sdf.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/solvate.py to solvate.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/tinker/__init__.py to __init__.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/tinker/amber.py to amber.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/tinker/keyword.py to keyword.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/tinker/realtime.py to realtime.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/tinker/state.py to state.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/water_amber.py to water_amber.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/water_residues.py to water_residues.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/chempy/xyz.py to xyz.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/__init__.py to __init__.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/ColorEditor.py to ColorEditor.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/Demo.py to Demo.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/PMGApp.py to PMGApp.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/PyMOLMapLoad.py to PyMOLMapLoad.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/SetEditor.py to SetEditor.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/Setting.py to Setting.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pmg_tk/skins/__init__.py to __init__.pyc :info:destroot byte-compiling 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/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/box.py to box.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/charge.py to charge.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/cleanup.py to cleanup.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/demo.py to demo.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/density.py to density.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/distance.py to distance.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/dragging.py to dragging.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/fedora.py to fedora.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/filter.py to filter.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/label.py to label.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/measurement.py to measurement.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/message.py to message.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/mutagenesis.py to mutagenesis.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/pair_fit.py to pair_fit.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/pseudoatom.py to pseudoatom.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/renaming.py to renaming.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/sculpting.py to sculpting.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/security.py to security.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/stereodemo.py to stereodemo.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizard/toggle.py to toggle.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/wizarding.py to wizarding.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/xray.py to xray.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/xwin.py to xwin.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol2/__init__.py to __init__.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol2/cmd2.py to cmd2.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol2/make_cmd2.py to make_cmd2.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/web/__init__.py to __init__.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/web/examples/__init__.py to __init__.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/web/examples/justhttpd.py to justhttpd.pyc :info:destroot byte-compiling /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/web/pymolhttpd.py to pymolhttpd.pyc :info:destroot running install_egg_info :info:destroot Writing /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol-1.7.1.1-py2.7.egg-info :info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/pymol_path :info:destroot copying LICENSE -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/pymol_path :info:destroot copying data -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/pymol_path/data :info:destroot copying test -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/pymol_path/test :info:destroot copying scripts -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/pymol_path/scripts :info:destroot copying examples -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pymol/pymol_path/examples :info:destroot creating /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin :info:destroot copying pymol -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin :debug:destroot Executing proc-post-org.macports.destroot-destroot-0 :debug:destroot Executing proc-post-org.macports.destroot-destroot-1 :error:destroot org.macports.destroot for port pymol returned: error copying "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol/setup/pymol_macports" to "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/bin/pymol": file already exists :debug:destroot Error code: NONE :debug:destroot Backtrace: error copying "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/pymol/setup/pymol_macports" to "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/work/destroot/opt/local/bin/pymol": file already exists while executing "proc-post-org.macports.destroot-destroot-1 org.macports.destroot" ("eval" body line 1) invoked from within "eval $post $targetname" :info:destroot Warning: targets not executed for pymol: org.macports.activate org.macports.destroot org.macports.install :notice:destroot Please see the log file for port pymol for details: /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_pymol/pymol/main.log