Opened 3 years ago

Closed 3 years ago

#51182 closed defect (fixed)

hdf5-18-1.8.16_3+cxx+hl+openmpi: builds Ok but fails while staging with missing h5cc

Reported by: gnurser (George Nurser) Owned by: tenomoto (Takeshi Enomoto)
Priority: Normal Milestone:
Component: ports Version: 2.3.4
Keywords: Cc: mamoll (Mark Moll)
Port: hdf5-18

Description (last modified by mf2k (Frank Schima))

Installation of upgraded hdf-18 (previous version was hdf5 @1.8.16_2+cxx+gcc49+hl+openmpi) fails with missing h5cc

Required as dependency when doing

sudo port upgrade netcdf +dap+netcdf4+openmpi

End of main.log gives:

:info:destroot xinstall: /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_hdf5-18/hdf5-18/work/hdf5-1.8.16/COPYING -> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_hdf5-18/hdf5-18/work/destroot/opt/local/share/hdf5-18/COPYING
:error:destroot org.macports.destroot for port hdf5-18 returned: error renaming "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_hdf5-18/hdf5-18/work/destroot/opt/local/bin/h5cc": no such file or directory
:debug:destroot Error code: NONE
:debug:destroot Backtrace: error renaming "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_hdf5-18/hdf5-18/work/destroot/opt/local/bin/h5cc": no such file or directory

Invocation of ./configure in main.log:

./configure --prefix=/opt/local --with-zlib=yes --enable-production --disable-fortran --enable-shared --enable-static --disable-threadsafe --with-default-plugindir=/opt/local/lib/hdf5-18 --program-suffix=-18 --includedir=/opt/local/include/hdf5-18 --libdir=/opt/local/lib/hdf5-18 --enable-unsupported --enable-parallel --enable-hl --enable-cxx

Attachments (1)

main.log (344.4 KB) - added by gnurser (George Nurser) 3 years ago.
main.log

Download all attachments as: .zip

Change History (4)

Changed 3 years ago by gnurser (George Nurser)

Attachment: main.log added

main.log

comment:1 Changed 3 years ago by mf2k (Frank Schima)

Cc: takeshi@… mcalhoun@… removed
Owner: changed from macports-tickets@… to takeshi@…
Port: hdf5-18 added

In the future, please use WikiFormatting and fill in the Port field.

comment:2 Changed 3 years ago by mf2k (Frank Schima)

Description: modified (diff)

comment:3 Changed 3 years ago by tenomoto (Takeshi Enomoto)

Resolution: fixed
Status: newclosed

Done in r147873.

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