Opened 4 weeks ago

Last modified 2 weeks ago

#57938 assigned defect

scalapack @2.0.2_4 +openmpi failed configure on macOS Mojave

Reported by: Bianca338 Owned by: seanfarley (Sean Farley)
Priority: Normal Milestone:
Component: ports Version:
Keywords: Cc: Bianca338
Port: scalapack

Description (last modified by mf2k (Frank Schima))

Configuration fails when building BLACS.

A similar issue was reported in ticket:52316 with the MPI implementation mpich and was resolved in revision https://github.com/macports/macports-ports/commit/9b1bac79563d8402d6352ffb0a86c9f3bad9fe88#diff-af4fc063fec009d42130985002ebc6d0. However, the issue is still there when configuring scalapack with openmpi.

Here are the last few lines of the main log file (scalapack/main.log):

:info:configure -- =========
:info:configure -- Compiling and Building BLACS INSTALL Testing to set correct variables
:info:configure CMake Error at CMAKE/FortranMangling.cmake:27 (MESSAGE):
:info:configure    Configure in the BLACS INSTALL directory FAILED
:info:configure Call Stack (most recent call first):
:info:configure   CMakeLists.txt:122 (COMPILE)
:info:configure -- Configuring incomplete, errors occurred!
:info:configure See also "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_scalapack/scalapack/work/build/CMakeFiles/CMakeOutput.log".
:info:configure Command failed:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_scalapack/scalapack/work/build" && /opt/local/bin/cmake -G "CodeBlocks - Unix Makefiles" -DCMAKE_BUILD_TYPE=MacPorts -DCMAKE_INSTALL_PREFIX="/opt/local" -DCMAKE_INSTALL_NAME_DIR="/opt/local/lib" -DCMAKE_SYSTEM_PREFIX_PATH="/opt/local;/usr" -DCMAKE_C_COMPILER="$CC" -DCMAKE_CXX_COMPILER="$CXX" -DCMAKE_POLICY_DEFAULT_CMP0025=NEW -DCMAKE_POLICY_DEFAULT_CMP0060=NEW -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_COLOR_MAKEFILE=ON -DCMAKE_FIND_FRAMEWORK=LAST -DCMAKE_EXPORT_COMPILE_COMMANDS=ON -DCMAKE_MODULE_PATH="/opt/local/share/cmake/Modules" -DCMAKE_PREFIX_PATH="/opt/local/share/cmake/Modules" -DCMAKE_BUILD_WITH_INSTALL_RPATH:BOOL=ON -DCMAKE_INSTALL_RPATH="/opt/local/lib" -Wno-dev -DCMAKE_INSTALL_NAME_DIR=/opt/local/lib -DBUILD_SHARED_LIBS=ON -DBUILD_TESTING=ON -DCMAKE_OSX_ARCHITECTURES="x86_64" -DCMAKE_OSX_DEPLOYMENT_TARGET="10.14" -DCMAKE_OSX_SYSROOT="/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk" -DMPI_C_COMPILER=mpicc-openmpi-mp -DMPI_Fortran_COMPILER=mpif90-openmpi-mp -DMPIEXEC=/opt/local/bin/mpiexec-openmpi-mp -DLAPACK_LIBRARIES="-L/opt/local/lib -lvecLibFort" /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_scalapack/scalapack/work/scalapack-2.0.2
:info:configure Exit code: 1
:error:configure Failed to configure scalapack: configure failure: command execution failed
:debug:configure Error code: NONE
:debug:configure Backtrace: configure failure: command execution failed
:debug:configure     while executing
:debug:configure "$procedure $targetname"

and here are the last few lines of the CMake log file in scalapack/work/build/CMakeFiles/CMakeOutput.log

Determining if the Fortran compiler supports Fortran 90 passed with the following output:
Change Dir: /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_scalapack/scalapack/work/build/CMakeFiles/CMakeTmp

Run Build Command:"/opt/local/bin/gmake" "cmTC_82c3d/fast"
/opt/local/bin/gmake -f CMakeFiles/cmTC_82c3d.dir/build.make CMakeFiles/cmTC_82c3d.dir/build
gmake[1]: Entering directory '/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_scalapack/scalapack/work/build/CMakeFiles/CMakeTmp'
Building Fortran object CMakeFiles/cmTC_82c3d.dir/testFortranCompilerF90.f90.o
/opt/local/bin/mpif90-openmpi-mp   -pipe -Os  -arch x86_64 -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk -mmacosx-version-min=10.14   -c /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_scalapack/scalapack/work/build/CMakeFiles/CMakeTmp/testFortranCompilerF90.f90 -o CMakeFiles/cmTC_82c3d.dir/testFortranCompilerF90.f90.o
Linking Fortran executable cmTC_82c3d
/opt/local/bin/cmake -E cmake_link_script CMakeFiles/cmTC_82c3d.dir/link.txt --verbose=1
/opt/local/bin/mpif90-openmpi-mp  -L/opt/local/lib -Wl,-headerpad_max_install_names -Wl,-syslibroot,/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk  -pipe -Os  -arch x86_64 -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk -mmacosx-version-min=10.14 CMakeFiles/cmTC_82c3d.dir/testFortranCompilerF90.f90.o  -o cmTC_82c3d
gmake[1]: Leaving directory '/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_scalapack/scalapack/work/build/CMakeFiles/CMakeTmp'

Change History (3)

comment:1 Changed 4 weeks ago by Bianca338

Owner: set to seanfarley
Status: newassigned

comment:2 Changed 4 weeks ago by Bianca338

Cc: Bianca338 added

comment:3 Changed 2 weeks ago by mf2k (Frank Schima)

Description: modified (diff)
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