Opened 5 years ago

Closed 5 years ago

#59248 closed defect (fixed)

OpenBlas fails to build on macOS 10.15 Catalina

Reported by: dashmurphy Owned by: NicosPavlov
Priority: Normal Milestone:
Component: ports Version: 2.6.1
Keywords: Cc: michaelld (Michael Dickens)
Port: OpenBLAS

Description (last modified by dashmurphy)

I am trying to install OpenBLAS and am running into this error: 

Program received signal SIGSEGV: Segmentation fault - invalid memory reference.

Backtrace for this error:
#0  0x10e2753e4
#1  0x10e274b06
#2  0x7fff67677b1c
/bin/sh: line 1: 59798 Segmentation fault: 11  OPENBLAS_NUM_THREADS=1 OMP_NUM_THREADS=1 ./sblat2 < ./sblat2.dat
make[1]: *** [level2] Error 139

I have attached the main.log file as well, any help resolving this would be much appreciated

Attachments (1)

main copy.log​ (2.9 MB) - added by dashmurphy 5 years ago.
OpenBLAS main log file w/ error

Change History (5)

Changed 5 years ago by dashmurphy

Attachment: main copy.log​ added

OpenBLAS main log file w/ error

comment:1 Changed 5 years ago by dashmurphy

Description: modified (diff)

comment:2 Changed 5 years ago by jmroot (Joshua Root)

Cc: michaelld added; nicos@… michaelld@… removed
Owner: set to NicosPavlov
Status: new → assigned

comment:3 Changed 5 years ago by dashmurphy 

sudo port install clang-5.0

sudo port clean openblas
sudo port -v install openblas +native configure.compiler=macports-clang-5.0

from ticket ->​https://trac.macports.org/ticket/58895 comment#4

Seems to have solved the issue though I'm not sure why

Needed OpenBLAS to install inkscape, it was my last dependency and now its built. Thanks for all the work you folks do!

comment:4 in reply to:  3 Changed 5 years ago by cjones051073 (Chris Jones)

Resolution: → fixed
Status: assigned → closed

Replying to dashmurphy: 

sudo port install clang-5.0

sudo port clean openblas
sudo port -v install openblas +native configure.compiler=macports-clang-5.0

from ticket ->​https://trac.macports.org/ticket/58895 comment#4

That ticket wasn’t the fix, this was

​https://github.com/macports/macports-ports/commit/6e78e5c9495b4dc4e7e050fae2b41dd5b9accfdd#diff-a755de84ca7f97ab071328807d829e0b

Seems to have solved the issue though I'm not sure why

Needed OpenBLAS to install inkscape, it was my last dependency and now its built. Thanks for all the work you folks do!

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