py312-arpeggio conflicts with arpeggio

[barracuda156]

--->  Activating arpeggio @1.4_3
x ./
x ./+COMMENT
x ./+CONTENTS
x ./+DESC
x ./+PORTFILE
x ./+STATE
x ./opt/
x ./opt/local/
x ./opt/local/bin/
x ./opt/local/bin/arpeggio
x ./opt/local/Library/
x ./opt/local/Library/Frameworks/
x ./opt/local/Library/Frameworks/Python.framework/
x ./opt/local/Library/Frameworks/Python.framework/Versions/
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/bin/
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/bin/arpeggio
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/__init__.py
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/__pycache__/
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/__pycache__/__init__.cpython-312.opt-1.pyc
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/__pycache__/__init__.cpython-312.pyc
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/core/
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/core/__init__.py
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/core/__pycache__/
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/core/__pycache__/__init__.cpython-312.opt-1.pyc
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/core/__pycache__/__init__.cpython-312.pyc
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/core/__pycache__/config.cpython-312.opt-1.pyc
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/core/__pycache__/config.cpython-312.pyc
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/core/__pycache__/exceptions.cpython-312.opt-1.pyc
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/core/__pycache__/exceptions.cpython-312.pyc
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/core/__pycache__/interactions.cpython-312.opt-1.pyc
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/core/__pycache__/interactions.cpython-312.pyc
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/core/__pycache__/protein_reader.cpython-312.opt-1.pyc
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/core/__pycache__/protein_reader.cpython-312.pyc
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/core/__pycache__/utils.cpython-312.opt-1.pyc
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/core/__pycache__/utils.cpython-312.pyc
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/core/config.py
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/core/exceptions.py
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/core/interactions.py
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/core/protein_reader.py
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/core/utils.py
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/helpers/
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/helpers/__pycache__/
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/helpers/__pycache__/contacts_to_graph.cpython-312.opt-1.pyc
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/helpers/__pycache__/contacts_to_graph.cpython-312.pyc
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/helpers/__pycache__/contacts_to_pv.cpython-312.opt-1.pyc
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/helpers/__pycache__/contacts_to_pv.cpython-312.pyc
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/helpers/__pycache__/show_contacts.cpython-312.opt-1.pyc
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/helpers/__pycache__/show_contacts.cpython-312.pyc
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/helpers/contacts_to_graph.py
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/helpers/contacts_to_pv.py
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/helpers/show_contacts.py
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/scripts/
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/scripts/__pycache__/
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/scripts/__pycache__/process_protein_cli.cpython-312.opt-1.pyc
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/scripts/__pycache__/process_protein_cli.cpython-312.pyc
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/scripts/process_protein_cli.py
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/tests/
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/tests/__pycache__/
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/tests/__pycache__/test_regression_test.cpython-312.opt-1.pyc
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/tests/__pycache__/test_regression_test.cpython-312.pyc
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/tests/helpers/
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/tests/helpers/__pycache__/
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/tests/helpers/__pycache__/utils.cpython-312.opt-1.pyc
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/tests/helpers/__pycache__/utils.cpython-312.pyc
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/tests/helpers/utils.py
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/tests/test_data/
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/tests/test_data/old_arpeggio/
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/tests/test_data/old_arpeggio/__pycache__/
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/tests/test_data/old_arpeggio/__pycache__/arpeggio.cpython-312.opt-1.pyc
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/tests/test_data/old_arpeggio/__pycache__/arpeggio.cpython-312.pyc
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/tests/test_data/old_arpeggio/__pycache__/config.cpython-312.opt-1.pyc
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/tests/test_data/old_arpeggio/__pycache__/config.cpython-312.pyc
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/tests/test_data/old_arpeggio/arpeggio.py
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/tests/test_data/old_arpeggio/config.py
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/tests/test_regression_test.py
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/Arpeggio-1.4.dist-info/
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/Arpeggio-1.4.dist-info/LICENSE
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/Arpeggio-1.4.dist-info/METADATA
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/Arpeggio-1.4.dist-info/RECORD
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/Arpeggio-1.4.dist-info/top_level.txt
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/Arpeggio-1.4.dist-info/WHEEL
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/bin/
x ./opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/bin/arpeggio
Error: Failed to activate arpeggio: The following ports have active files that conflict with arpeggio's:
py312-arpeggio @2.0.2_0
  /opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/__init__.py
  /opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/__pycache__/__init__.cpython-312.opt-1.pyc
  /opt/local/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/arpeggio/__pycache__/__init__.cpython-312.pyc
Image error: Conflicting file(s) present. Please deactivate the conflicting port(s) first, or use 'port -f activate arpeggio' to force the activation.
    while executing
"throw registry::image-error $msg"
    ("foreach" body line 35)
    invoked from within
"foreach file $imagefiles {
                incr progress_step
                _progress update $progress_step $progress_total_steps
                se..."
    invoked from within
"registry::write {
            foreach file $imagefiles {
                incr progress_step
                _progress update $progress_step $progress_..."
Error: See /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_arpeggio/arpeggio/main.log for details.
Error: Follow https://guide.macports.org/#project.tickets if you believe there
is a bug.

So arpeggio depends on py312-arpeggio, but conflicts with it.

[jmroot (Joshua Root)]

These are completely different packages. There is no dependency.

• arpeggio: ​https://pypi.org/project/pdbe-arpeggio/
• py-arpeggio: ​https://pypi.org/project/Arpeggio/

[reneeotten (Renee Otten)]

In e16f27f495e759b777ab65ac0e8c185ff5a8705e/macports-ports (master):

arpeggio,py312-arpeggio: ports conflict

Closes: #71482

[jmroot (Joshua Root)]

The current version of arpeggio on PyPI installs under the name pdbe-arpeggio, so simply updating should fix the conflict.