Opened 11 months ago

Closed 6 months ago

#71741 closed defect (fixed)

vtk @9.4.1: Seg fault from Apple clang 11.0.3, Catalina only

Reported by: Dave-Allured (Dave Allured) Owned by: Dave-Allured (Dave Allured)
Priority: Normal Milestone:
Component: ports Version:
Keywords: Cc: barracuda156
Port: vtk

Description

Error on Catalina 10.15 x86 builder. Build log is attached.

This happened after another 10.15 build error was fixed, wrong patch, following the vtk 9.4.1 update.

Is this just a compiler select problem?

cd /opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/build/Filters/General && /usr/bin/clang++ -DFMT_SHARED -DFiltersGeneral_EXPORTS -Dkiss_fft_scalar=double -I/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/VTK-9.4.1/Filters/General -I/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/build/Filters/General -I/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/VTK-9.4.1/Common/Core -I/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/build/Common/Core -I/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/VTK-9.4.1/ThirdParty/token/vtktoken/token -I/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/build/ThirdParty/token/vtktoken/token -I/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/VTK-9.4.1/ThirdParty/token/vtktoken -I/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/build/ThirdParty/token/vtktoken -I/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/VTK-9.4.1/ThirdParty/nlohmannjson/vtknlohmannjson -I/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/build/ThirdParty/nlohmannjson/vtknlohmannjson -I/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/VTK-9.4.1/ThirdParty/nlohmannjson/vtknlohmannjson/include -I/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/VTK-9.4.1/Common/DataModel -I/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/build/Common/DataModel -I/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/VTK-9.4.1/Common/Math -I/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/build/Common/Math -I/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/VTK-9.4.1/ThirdParty/kissfft/vtkkissfft -I/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/build/ThirdParty/kissfft/vtkkissfft -I/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/VTK-9.4.1/Common/Transforms -I/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/build/Common/Transforms -I/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/VTK-9.4.1/Common/ExecutionModel -I/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/build/Common/ExecutionModel -I/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/VTK-9.4.1/Common/Misc -I/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/build/Common/Misc -I/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/VTK-9.4.1/Filters/Core -I/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/build/Filters/Core -I/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/VTK-9.4.1/Common/ComputationalGeometry -I/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/build/Common/ComputationalGeometry -I/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/VTK-9.4.1/Common/System -I/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/build/Common/System -I/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/VTK-9.4.1/Filters/Geometry -I/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/build/Filters/Geometry -I/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/VTK-9.4.1/Filters/Verdict -I/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/build/Filters/Verdict -I/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/VTK-9.4.1/ThirdParty/fmt/vtkfmt -I/opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/build/ThirdParty/fmt/vtkfmt -isystem /opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/build/Utilities/KWIML -isystem /opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/VTK-9.4.1/Utilities/KWIML -isystem /opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/build/Utilities/KWSys -isystem /opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/VTK-9.4.1/Utilities/KWSys -isystem /opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/build/ThirdParty/token -isystem /opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/VTK-9.4.1/ThirdParty/token -isystem /opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/build/ThirdParty/nlohmannjson -isystem /opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/VTK-9.4.1/ThirdParty/nlohmannjson -isystem /opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/build/ThirdParty/kissfft -isystem /opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/VTK-9.4.1/ThirdParty/kissfft -isystem /opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/build/ThirdParty/fmt -isystem /opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/VTK-9.4.1/ThirdParty/fmt -pipe -Os -DNDEBUG -I/opt/local/include -stdlib=libc++ -isysroot/Library/Developer/CommandLineTools/SDKs/MacOSX10.15.sdk  -O3 -DNDEBUG -std=c++11 -arch x86_64 -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX10.15.sdk -mmacosx-version-min=10.15 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT Filters/General/CMakeFiles/FiltersGeneral.dir/vtkYoungsMaterialInterface.cxx.o -MF CMakeFiles/FiltersGeneral.dir/vtkYoungsMaterialInterface.cxx.o.d -o CMakeFiles/FiltersGeneral.dir/vtkYoungsMaterialInterface.cxx.o -c /opt/local/var/macports/build/_opt_bblocal_var_buildworker_ports_build_ports_graphics_vtk/vtk/work/VTK-9.4.1/Filters/General/vtkYoungsMaterialInterface.cxx
clang: error: unable to execute command: Segmentation fault: 11
clang: error: clang frontend command failed due to signal (use -v to see invocation)
Apple clang version 11.0.3 (clang-1103.0.32.62)
Target: x86_64-apple-darwin19.6.0
Thread model: posix
InstalledDir: /Library/Developer/CommandLineTools/usr/bin

Attachments (1)

stdio.10.15.fail.log.tar (299.3 KB) - added by Dave-Allured (Dave Allured) 11 months ago.

Download all attachments as: .zip

Change History (3)

Changed 11 months ago by Dave-Allured (Dave Allured)

Attachment: stdio.10.15.fail.log.tar added

comment:1 Changed 6 months ago by Dave-Allured (Dave Allured)

Was fixed by [b43d28cdaf9c3392105d814de2fe43b5dcc9de8e/macports-ports] (update to VTK 9.5.0).

Please close this ticket.

Last edited 6 months ago by ryandesign (Ryan Carsten Schmidt) (previous) (diff)

comment:2 Changed 6 months ago by ryandesign (Ryan Carsten Schmidt)

Resolution: fixed
Status: assignedclosed
Summary: vtk: Seg fault from Apple clang 11.0.3, Catalina onlyvtk @9.4.1: Seg fault from Apple clang 11.0.3, Catalina only
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