Opened 3 weeks ago
Last modified 3 weeks ago
#74159 new defect
R-app @1.82_2 fails rev-upgrade check then fails to rebuild
| Reported by: | msrski59 | Owned by: | |
|---|---|---|---|
| Priority: | Normal | Milestone: | |
| Component: | ports | Version: | 2.12.5 |
| Keywords: | Sequoia | Cc: | kjellpk (Kjell Konis), i0ntempest |
| Port: | R-app |
Description (last modified by msrski59)
On Sequoia 15.7.7 with Xcode and Command Line Tools 26.3
After running upgrade outdated rev-upgrade flagged R-app as broken:
---> Scanning binaries for linking errors
Could not open /opt/local/Library/Frameworks/R.framework/Versions/4.5/Resources/lib/libR.dylib: Error opening or reading file (referenced from /Applications/MacPorts/R.app/Contents/MacOS/R)
---> Found 1 broken file, matching files to ports
---> Found 1 broken port, determining rebuild order
---> Rebuilding in order
R-app @1.82_2
The rebuild failed after SDK 'macosx15.4' could not be found and warnings were generated about unsupported headermap styles.
I cleaned R-app and ran rev-upgrade again, and the build failed again with the same issues.
I uninstalled R-app and then reinstalled it. The build failed with the same issues.
I am attaching the logs from the first build failure and the failed reinstall. They are slightly different.
Attachments (3)
Change History (10)
Changed 3 weeks ago by msrski59
comment:1 Changed 3 weeks ago by msrski59
This might relate to #73727 from March. I experienced a build failure of R-app @1.82_2, and the log referenced a missing SDK with warnings about headermap styles. After two days of cleaning and trying again, R-app mysteriously built without issue. When I reported this the ticket was properly closed. The issues seem to be too close for just a coincidence.
comment:2 Changed 3 weeks ago by msrski59
When I reported the build failure in #73727, I noted that R-app built without issue on my older desktop running Monterey. That is not the case this time.
On Monterey 12.7.6 with Xcode and Command Line Tools 14.2:
Same issue as above. After running upgrade outdated today rev-upgrade flagged R-app as broken with the same message as above. rev-upgrade's attempted rebuild failed. Cleaning and re-running rev-upgrade gave the same result.
I uninstalled R-app and reinstalled. Same result -- build failure.
On Monterey the builds throw an error about an implicit declaration of function SETLEVELS being invalid. This does not appear in the Sequoia build logs, so I am attaching a Monterey build log for comparison.
comment:3 Changed 3 weeks ago by msrski59
| Description: | modified (diff) |
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comment:4 Changed 3 weeks ago by msrski59
| Description: | modified (diff) |
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comment:5 follow-up: 7 Changed 3 weeks ago by i0ntempest
Upstream did not release a new source tarball for R-app that is compatible with R 4.6. Until they do that this port is effectively defunct and I recommend uninstalling it.
comment:6 Changed 3 weeks ago by i0ntempest <i0ntempest@…>
comment:7 Changed 3 weeks ago by msrski59
Replying to i0ntempest:
Upstream did not release a new source tarball for R-app that is compatible with R 4.6. Until they do that this port is effectively defunct and I recommend uninstalling it.
Understood. Thanks for the info.

log of rev-upgrade rebuild failure