Ticket #33289 (closed update: fixed)
pymol: update to 1.5
| Reported by: | howarth@… | Owned by: | macports-tickets@… |
|---|---|---|---|
| Priority: | Normal | Milestone: | |
| Component: | ports | Version: | |
| Keywords: | haspatch maintainer | Cc: | snc@… |
| Port: | pymol |
Description (last modified by ryandesign@…) (diff)
Update pymol to the new 1.5 release from the pymol svn.
Implement use of configure.compiler for variants as requested.
Remove explicit usage of clang as it is now the default for macports 2.0.3 on :Lion.
Note that upstream no longer supports 'setup.py build' and requests
that 'setup.py install' be used instead, hence the empty build phase.
Also note that my patches to setup.py for fink/macports has been accepted
upstream so that the setup_py.diff patch is now much reduced in size.
Attachments
Change History
Changed 15 months ago by howarth@…
- Attachment setup_py.diff added
comment:1 follow-up: ↓ 2 Changed 15 months ago by ryandesign@…
- Keywords haspatch maintainer added; science removed
- Summary changed from update pymol to to pymol: update to 1.5
- Description modified (diff)
- Milestone MacPorts 2.0.4 deleted
clang is not the default on Lion; clang is the default on Xcode 4.2 and later, regardless of OS.
comment:2 in reply to: ↑ 1 Changed 15 months ago by howarth@…
Replying to ryandesign@…:
clang is not the default on Lion; clang is the default on Xcode 4.2 and later, regardless of OS.
Close enough as anyone with Xcode 4 can upgrade to 4.2.
Changed 15 months ago by howarth@…
- Attachment Portfile.diff added
updated Portfile.diff to include apbs-psize.py and pmw_tk fixes
Changed 15 months ago by howarth@…
- Attachment pymol_shell.diff added
apbs-psize.py can be found without setting enviromentals
Changed 15 months ago by howarth@…
- Attachment pmg_tk_platform.patch added
allow darwin to use same X11 wm fixes for pmw as linux2
Changed 15 months ago by howarth@…
- Attachment apbs-psize.patch added
correct filename used for psize.py to apbs-psize.py
comment:3 Changed 15 months ago by howarth@…
Added fixes so APBS-Tools extension can properly find the apbs-psize.py from our apbs package.
Also allow darwin to use the same pmw-tk fixes for X11 window managers as linux.
revised setup_py.diff patch for pymol-1.5