py-tables: bump revision when changing hdf5

[Deil.Christoph@…]

I get a similar crash (attached) as reported in ticket #33369 when executing the command:

python -c 'import tables; tables.test()'

I first noticed this problem when working with the pandas python package, this gives a similar crash:

nosetests-2.7 --exe pandas --verbose 10

Looking at the py-tables portfile I don't see an explicit reference to a hdf5 version, so maybe the dependency has to be set up differently so that py-tables is re-built automatically every time hdf5 is updated?

[Deil.Christoph@…]

I tried this command, which is recommended with update problems before filing a ticket in the user guide:

port -nR upgrade --force hdf5-18

The error remains.

I guess it doesn't help here because I re-download the binary version of the py-table port instead of re-building it with the hdf5-18 I have installed?

[ryandesign@…]

That's likely. You can add the "-s" switch to force a build from source.

The subports of the py-tables port do have a declared dependency on the hdf5-18 port.

[Deil.Christoph@…]

Replying to ryandesign@…:

That's likely. You can add the "-s" switch to force a build from source.

Thanks, after this everything works for me:

port -snR upgrade --force hdf5-18

The subports of the py-tables port do have a declared dependency on the hdf5-18 port.

Than why am I seeing a problem?

Were the binaries I am downloading (e.g. of py27-tables) rebuilt after the latest hdf5-18 update?

[mmoll@…]

I increased the revision to force rebuilding. See r94172.