Ticket #28493: main.log

File main.log, 19.6 KB (added by astrofitz (Michael Fitzgerald), 13 years ago)

build log

Line 
1version:1
2:msg:clean --->  Computing dependencies for hdf5-18:info:clean .:debug:clean Searching for dependency: zlib
3:debug:clean Found Dependency: receipt exists for zlib
4:debug:clean Searching for dependency: szip
5:debug:clean Found Dependency: receipt exists for szip
6:msg:clean
7:debug:main Executing org.macports.main (hdf5-18)
8:debug:main Skipping completed org.macports.fetch (hdf5-18)
9:debug:main Skipping completed org.macports.checksum (hdf5-18)
10:debug:main setting option extract.cmd to /usr/bin/bzip2
11:debug:main Skipping completed org.macports.extract (hdf5-18)
12:debug:main Skipping completed org.macports.patch (hdf5-18)
13:debug:main Skipping completed org.macports.configure (hdf5-18)
14:msg:main --->  Building hdf5-18
15:debug:build build phase started at Sun Feb 20 19:54:04 PST 2011
16:debug:build Executing org.macports.build (hdf5-18)
17:debug:build Environment: CPATH='/opt/local/include' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_hdf5-18/work/.CC_PRINT_OPTIONS' LIBRARY_PATH='/opt/local/lib' CC_PRINT_OPTIONS='YES' MACOSX_DEPLOYMENT_TARGET='10.6'
18:debug:build Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_hdf5-18/work/hdf5-1.8.6" && /usr/bin/make -j4 all'
19:info:build Making all in src
20:info:build /usr/bin/make  all-am
21:info:build /bin/sh ../libtool --tag=CC   --mode=compile /usr/bin/gcc-4.2 -DHAVE_CONFIG_H -I.  -DNDEBUG -UH5_DEBUG_API -I/opt/local/include -std=c99 -pedantic -Wall -Wextra -Wundef -Wshadow -Wpointer-arith -Wbad-function-cast -Wcast-qual -Wcast-align -Wwrite-strings -Wconversion -Waggregate-return -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wredundant-decls -Wnested-externs -Winline -Wno-long-long -Wfloat-equal -Wmissing-format-attribute -Wmissing-noreturn -Wpacked -Wdisabled-optimization -Wformat=2 -Wunreachable-code -Wendif-labels -Wdeclaration-after-statement -Wold-style-definition -Winvalid-pch -Wvariadic-macros -Wnonnull -Winit-self -Wmissing-include-dirs -Wswitch-default -Wswitch-enum -Wunused-macros -Wunsafe-loop-optimizations -Wc++-compat -Wvolatile-register-var -Wstrict-overflow -O3 -fomit-frame-pointer -finline-functions -pipe -O2 -arch x86_64 -MT H5.lo -MD -MP -MF .deps/H5.Tpo -c -o H5.lo H5.c
22:info:build /bin/sh ../libtool --tag=CC   --mode=compile /usr/bin/gcc-4.2 -DHAVE_CONFIG_H -I.  -DNDEBUG -UH5_DEBUG_API -I/opt/local/include -std=c99 -pedantic -Wall -Wextra -Wundef -Wshadow -Wpointer-arith -Wbad-function-cast -Wcast-qual -Wcast-align -Wwrite-strings -Wconversion -Waggregate-return -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wredundant-decls -Wnested-externs -Winline -Wno-long-long -Wfloat-equal -Wmissing-format-attribute -Wmissing-noreturn -Wpacked -Wdisabled-optimization -Wformat=2 -Wunreachable-code -Wendif-labels -Wdeclaration-after-statement -Wold-style-definition -Winvalid-pch -Wvariadic-macros -Wnonnull -Winit-self -Wmissing-include-dirs -Wswitch-default -Wswitch-enum -Wunused-macros -Wunsafe-loop-optimizations -Wc++-compat -Wvolatile-register-var -Wstrict-overflow -O3 -fomit-frame-pointer -finline-functions -pipe -O2 -arch x86_64 -MT H5checksum.lo -MD -MP -MF .deps/H5checksum.Tpo -c -o H5checksum.lo H5checksum.c
23:info:build /bin/sh ../libtool --tag=CC   --mode=compile /usr/bin/gcc-4.2 -DHAVE_CONFIG_H -I.  -DNDEBUG -UH5_DEBUG_API -I/opt/local/include -std=c99 -pedantic -Wall -Wextra -Wundef -Wshadow -Wpointer-arith -Wbad-function-cast -Wcast-qual -Wcast-align -Wwrite-strings -Wconversion -Waggregate-return -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wredundant-decls -Wnested-externs -Winline -Wno-long-long -Wfloat-equal -Wmissing-format-attribute -Wmissing-noreturn -Wpacked -Wdisabled-optimization -Wformat=2 -Wunreachable-code -Wendif-labels -Wdeclaration-after-statement -Wold-style-definition -Winvalid-pch -Wvariadic-macros -Wnonnull -Winit-self -Wmissing-include-dirs -Wswitch-default -Wswitch-enum -Wunused-macros -Wunsafe-loop-optimizations -Wc++-compat -Wvolatile-register-var -Wstrict-overflow -O3 -fomit-frame-pointer -finline-functions -pipe -O2 -arch x86_64 -MT H5dbg.lo -MD -MP -MF .deps/H5dbg.Tpo -c -o H5dbg.lo H5dbg.c
24:info:build /bin/sh ../libtool --tag=CC   --mode=compile /usr/bin/gcc-4.2 -DHAVE_CONFIG_H -I.  -DNDEBUG -UH5_DEBUG_API -I/opt/local/include -std=c99 -pedantic -Wall -Wextra -Wundef -Wshadow -Wpointer-arith -Wbad-function-cast -Wcast-qual -Wcast-align -Wwrite-strings -Wconversion -Waggregate-return -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wredundant-decls -Wnested-externs -Winline -Wno-long-long -Wfloat-equal -Wmissing-format-attribute -Wmissing-noreturn -Wpacked -Wdisabled-optimization -Wformat=2 -Wunreachable-code -Wendif-labels -Wdeclaration-after-statement -Wold-style-definition -Winvalid-pch -Wvariadic-macros -Wnonnull -Winit-self -Wmissing-include-dirs -Wswitch-default -Wswitch-enum -Wunused-macros -Wunsafe-loop-optimizations -Wc++-compat -Wvolatile-register-var -Wstrict-overflow -O3 -fomit-frame-pointer -finline-functions -pipe -O2 -arch x86_64 -MT H5system.lo -MD -MP -MF .deps/H5system.Tpo -c -o H5system.lo H5system.c
25:info:build libtool: compile:  /usr/bin/gcc-4.2 -DHAVE_CONFIG_H -I. -DNDEBUG -UH5_DEBUG_API -I/opt/local/include -std=c99 -pedantic -Wall -Wextra -Wundef -Wshadow -Wpointer-arith -Wbad-function-cast -Wcast-qual -Wcast-align -Wwrite-strings -Wconversion -Waggregate-return -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wredundant-decls -Wnested-externs -Winline -Wno-long-long -Wfloat-equal -Wmissing-format-attribute -Wmissing-noreturn -Wpacked -Wdisabled-optimization -Wformat=2 -Wunreachable-code -Wendif-labels -Wdeclaration-after-statement -Wold-style-definition -Winvalid-pch -Wvariadic-macros -Wnonnull -Winit-self -Wmissing-include-dirs -Wswitch-default -Wswitch-enum -Wunused-macros -Wunsafe-loop-optimizations -Wc++-compat -Wvolatile-register-var -Wstrict-overflow -O3 -fomit-frame-pointer -finline-functions -pipe -O2 -arch x86_64 -MT H5.lo -MD -MP -MF .deps/H5.Tpo -c H5.c  -fno-common -DPIC -o .libs/H5.o
26:info:build libtool: compile:  /usr/bin/gcc-4.2 -DHAVE_CONFIG_H -I. -DNDEBUG -UH5_DEBUG_API -I/opt/local/include -std=c99 -pedantic -Wall -Wextra -Wundef -Wshadow -Wpointer-arith -Wbad-function-cast -Wcast-qual -Wcast-align -Wwrite-strings -Wconversion -Waggregate-return -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wredundant-decls -Wnested-externs -Winline -Wno-long-long -Wfloat-equal -Wmissing-format-attribute -Wmissing-noreturn -Wpacked -Wdisabled-optimization -Wformat=2 -Wunreachable-code -Wendif-labels -Wdeclaration-after-statement -Wold-style-definition -Winvalid-pch -Wvariadic-macros -Wnonnull -Winit-self -Wmissing-include-dirs -Wswitch-default -Wswitch-enum -Wunused-macros -Wunsafe-loop-optimizations -Wc++-compat -Wvolatile-register-var -Wstrict-overflow -O3 -fomit-frame-pointer -finline-functions -pipe -O2 -arch x86_64 -MT H5system.lo -MD -MP -MF .deps/H5system.Tpo -c H5system.c  -fno-common -DPIC -o .libs/H5system.o
27:info:build libtool: compile:  /usr/bin/gcc-4.2 -DHAVE_CONFIG_H -I. -DNDEBUG -UH5_DEBUG_API -I/opt/local/include -std=c99 -pedantic -Wall -Wextra -Wundef -Wshadow -Wpointer-arith -Wbad-function-cast -Wcast-qual -Wcast-align -Wwrite-strings -Wconversion -Waggregate-return -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wredundant-decls -Wnested-externs -Winline -Wno-long-long -Wfloat-equal -Wmissing-format-attribute -Wmissing-noreturn -Wpacked -Wdisabled-optimization -Wformat=2 -Wunreachable-code -Wendif-labels -Wdeclaration-after-statement -Wold-style-definition -Winvalid-pch -Wvariadic-macros -Wnonnull -Winit-self -Wmissing-include-dirs -Wswitch-default -Wswitch-enum -Wunused-macros -Wunsafe-loop-optimizations -Wc++-compat -Wvolatile-register-var -Wstrict-overflow -O3 -fomit-frame-pointer -finline-functions -pipe -O2 -arch x86_64 -MT H5checksum.lo -MD -MP -MF .deps/H5checksum.Tpo -c H5checksum.c  -fno-common -DPIC -o .libs/H5checksum.o
28:info:build libtool: compile:  /usr/bin/gcc-4.2 -DHAVE_CONFIG_H -I. -DNDEBUG -UH5_DEBUG_API -I/opt/local/include -std=c99 -pedantic -Wall -Wextra -Wundef -Wshadow -Wpointer-arith -Wbad-function-cast -Wcast-qual -Wcast-align -Wwrite-strings -Wconversion -Waggregate-return -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wredundant-decls -Wnested-externs -Winline -Wno-long-long -Wfloat-equal -Wmissing-format-attribute -Wmissing-noreturn -Wpacked -Wdisabled-optimization -Wformat=2 -Wunreachable-code -Wendif-labels -Wdeclaration-after-statement -Wold-style-definition -Winvalid-pch -Wvariadic-macros -Wnonnull -Winit-self -Wmissing-include-dirs -Wswitch-default -Wswitch-enum -Wunused-macros -Wunsafe-loop-optimizations -Wc++-compat -Wvolatile-register-var -Wstrict-overflow -O3 -fomit-frame-pointer -finline-functions -pipe -O2 -arch x86_64 -MT H5dbg.lo -MD -MP -MF .deps/H5dbg.Tpo -c H5dbg.c  -fno-common -DPIC -o .libs/H5dbg.o
29:info:build In file included from H5private.h:1655,
30:info:build                  from H5dbg.c:34:
31:info:build H5TSprivate.h:42: error: expected specifier-qualifier-list before 'CRITICAL_SECTION'
32:info:build H5TSprivate.h:43: warning: struct has no members
33:info:build In file included from H5private.h:1655,
34:info:build                  from H5checksum.c:35:
35:info:build H5TSprivate.h:42: error: expected specifier-qualifier-list before 'CRITICAL_SECTION'
36:info:build In file included from H5private.h:1655,
37:info:build                  from H5.c:24:
38:info:build H5TSprivate.h:42: error: expected specifier-qualifier-list before 'CRITICAL_SECTION'
39:info:build H5TSprivate.h:43: warning: struct has no membersH5TSprivate.h:44: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'H5TS_mutex_simple_t'
40:info:build
41:info:build H5TSprivate.h:43: warning: struct has no members
42:info:build H5TSprivate.h:45: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'H5TS_thread_t'
43:info:build H5TSprivate.h:44: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'H5TS_mutex_simple_t'
44:info:build H5TSprivate.h:46: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'H5TS_attr_t'
45:info:build H5TSprivate.h:44: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'H5TS_mutex_simple_t'
46:info:build H5TSprivate.h:45: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'H5TS_thread_t'
47:info:build H5TSprivate.h:47: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'H5TS_key_t'
48:info:build H5TSprivate.h:45: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'H5TS_thread_t'
49:info:build H5TSprivate.h:48: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'H5TS_once_t'
50:info:build H5TSprivate.h:46: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'H5TS_attr_t'
51:info:build H5TSprivate.h:47: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'H5TS_key_t'
52:info:build In file included from H5private.h:1655,
53:info:build                  from H5system.c:35:
54:info:build H5TSprivate.h:42: error: expected specifier-qualifier-list before 'CRITICAL_SECTION'
55:info:build H5TSprivate.h:46: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'H5TS_attr_t'
56:info:build H5TSprivate.h:66: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'CALLBACK'H5TSprivate.h:43: warning: struct has no members
57:info:build
58:info:build H5TSprivate.h:47: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'H5TS_key_t'
59:info:build H5TSprivate.h:48: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'H5TS_once_t'
60:info:build H5TSprivate.h:48: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'H5TS_once_t'
61:info:build H5TSprivate.h:104: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'H5TS_first_init_g'
62:info:build H5TSprivate.h:66: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'CALLBACK'H5TSprivate.h:105: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'H5TS_errstk_key_g'
63:info:build H5TSprivate.h:44: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'H5TS_mutex_simple_t'
64:info:build H5TSprivate.h:66: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'CALLBACK'
65:info:build
66:info:build H5TSprivate.h:45: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'H5TS_thread_t'H5TSprivate.h:106: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'H5TS_funcstk_key_g'
67:info:build H5TSprivate.h:104: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'H5TS_first_init_g'
68:info:build H5TSprivate.h:104: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'H5TS_first_init_g'
69:info:build H5TSprivate.h:105: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'H5TS_errstk_key_g'
70:info:build H5TSprivate.h:105: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'H5TS_errstk_key_g'
71:info:build H5TSprivate.h:106: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'H5TS_funcstk_key_g'
72:info:build H5TSprivate.h:106: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'H5TS_funcstk_key_g'
73:info:build H5TSprivate.h:118: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'H5TS_create_thread'
74:info:build H5TSprivate.h:118: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'H5TS_create_thread'H5TSprivate.h:118: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'H5TS_create_thread'
75:info:build
76:info:build
77:info:build H5TSprivate.h:46: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'H5TS_attr_t'
78:info:build H5TSprivate.h:47: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'H5TS_key_t'
79:info:build H5TSprivate.h:48: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'H5TS_once_t'
80:info:build H5TSprivate.h:66: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'CALLBACK'
81:info:build H5TSprivate.h:104: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'H5TS_first_init_g'
82:info:build H5TSprivate.h:105: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'H5TS_errstk_key_g'
83:info:build H5TSprivate.h:106: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'H5TS_funcstk_key_g'
84:info:build H5TSprivate.h:118: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'H5TS_create_thread'
85:info:build H5checksum.c: In function 'H5_checksum_lookup3':
86:info:build H5checksum.c:409: warning: switch missing default case
87:info:build make[2]: *** [H5dbg.lo] Error 1
88:info:build make[2]: *** Waiting for unfinished jobs....
89:info:build make[2]: *** [H5checksum.lo] Error 1
90:info:build H5system.c: In function 'HDfprintf':
91:info:build H5system.c:142: warning: switch missing default case
92:info:build H5system.c:261: warning: format not a string literal, argument types not checked
93:info:build H5system.c:264: warning: format not a string literal, argument types not checked
94:info:build H5system.c:267: warning: format not a string literal, argument types not checked
95:info:build H5system.c:270: warning: format not a string literal, argument types not checked
96:info:build H5system.c:280: warning: format not a string literal, argument types not checked
97:info:build H5system.c:283: warning: format not a string literal, argument types not checked
98:info:build H5system.c:286: warning: format not a string literal, argument types not checked
99:info:build H5system.c:289: warning: format not a string literal, argument types not checked
100:info:build H5system.c:300: warning: format not a string literal, argument types not checked
101:info:build H5system.c:303: warning: format not a string literal, argument types not checked
102:info:build H5system.c:311: warning: format not a string literal, argument types not checked
103:info:build H5system.c:340: warning: format not a string literal, argument types not checked
104:info:build H5system.c:348: warning: format not a string literal, argument types not checked
105:info:build H5system.c:356: warning: format not a string literal, argument types not checked
106:info:build H5system.c:364: warning: format not a string literal, argument types not checked
107:info:build H5system.c:370: warning: format not a string literal, argument types not checked
108:info:build H5system.c: In function 'H5_build_extpath':
109:info:build H5system.c:679: warning: passing argument 1 of 'malloc' with different width due to prototype
110:info:build H5system.c:692: warning: passing argument 2 of 'getcwd' with different width due to prototype
111:info:build H5system.c:708: warning: passing argument 2 of 'getcwd' with different width due to prototype
112:info:build make[2]: *** [H5system.lo] Error 1
113:info:build H5.c: In function 'H5_term_library':
114:info:build H5.c:217: warning: implicit declaration of function 'InitOnceExecuteOnce'
115:info:build H5.c:217: warning: nested extern declaration of 'InitOnceExecuteOnce'
116:info:build H5.c:217: error: 'H5TS_first_init_g' undeclared (first use in this function)
117:info:build H5.c:217: error: (Each undeclared identifier is reported only once
118:info:build H5.c:217: error: for each function it appears in.)
119:info:build H5.c:217: error: 'H5TS_win32_first_thread_init' undeclared (first use in this function)
120:info:build H5.c: In function 'H5dont_atexit':
121:info:build H5.c:352: error: 'H5TS_first_init_g' undeclared (first use in this function)
122:info:build H5.c:352: error: 'H5TS_win32_first_thread_init' undeclared (first use in this function)
123:info:build H5.c:352: warning: unused variable 'FUNC'
124:info:build H5.c: In function 'H5garbage_collect':
125:info:build H5.c:391: error: 'H5TS_first_init_g' undeclared (first use in this function)
126:info:build H5.c:391: error: 'H5TS_win32_first_thread_init' undeclared (first use in this function)
127:info:build H5.c: In function 'H5set_free_list_limits':
128:info:build H5.c:443: error: 'H5TS_first_init_g' undeclared (first use in this function)
129:info:build H5.c:443: error: 'H5TS_win32_first_thread_init' undeclared (first use in this function)
130:info:build H5.c: In function 'H5get_libversion':
131:info:build H5.c:574: error: 'H5TS_first_init_g' undeclared (first use in this function)
132:info:build H5.c:574: error: 'H5TS_win32_first_thread_init' undeclared (first use in this function)
133:info:build H5.c: In function 'H5check_version':
134:info:build H5.c:629: error: 'H5TS_first_init_g' undeclared (first use in this function)
135:info:build H5.c:629: error: 'H5TS_win32_first_thread_init' undeclared (first use in this function)
136:info:build H5.c:629: warning: unused variable 'FUNC'
137:info:build H5.c: In function 'H5open':
138:info:build H5.c:743: error: 'H5TS_first_init_g' undeclared (first use in this function)
139:info:build H5.c:743: error: 'H5TS_win32_first_thread_init' undeclared (first use in this function)
140:info:build H5.c: In function 'H5close':
141:info:build H5.c:773: error: 'H5TS_first_init_g' undeclared (first use in this function)
142:info:build H5.c:773: error: 'H5TS_win32_first_thread_init' undeclared (first use in this function)
143:info:build H5.c:773: warning: unused variable 'FUNC'
144:info:build make[2]: *** [H5.lo] Error 1
145:info:build make[1]: *** [all] Error 2
146:info:build make: *** [all-recursive] Error 1
147:info:build shell command " cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_hdf5-18/work/hdf5-1.8.6" && /usr/bin/make -j4 all " returned error 2
148:error:build Target org.macports.build returned: shell command failed (see log for details)
149:debug:build Backtrace: shell command failed (see log for details)
150    while executing
151"command_exec build"
152    (procedure "portbuild::build_main" line 8)
153    invoked from within
154"$procedure $targetname"
155:info:build Warning: the following items did not execute (for hdf5-18): org.macports.destroot org.macports.build
156:notice:build Log for hdf5-18 is at: /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_ports_science_hdf5-18/main.log