Ticket #36220: logfile.txt

DEBUG: epoch: in tree: 0 installed: 0
DEBUG: swig-python 2.0.8_1 exists in the ports tree
DEBUG: swig-python 2.0.8_1  is the latest installed
DEBUG: swig-python 2.0.8_1  is active
DEBUG: Merging existing variants '' into variants
DEBUG: new fully merged portvariants: 
DEBUG: Changing to port directory: /Users/ci/devel/repos/macports/trunk/dports/devel/swig
DEBUG: OS darwin/11.4.0 (Mac OS X 10.7) arch i386
DEBUG: org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
DEBUG: org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
DEBUG: org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
DEBUG: only one arch supported, so not adding the default universal variant
DEBUG: No need to upgrade! swig-python 2.0.8_1 >= swig-python 2.0.8_1
DEBUG: epoch: in tree: 0 installed: 0
DEBUG: python_select 0.3_1 exists in the ports tree
DEBUG: python_select 0.3_1  is the latest installed
DEBUG: python_select 0.3_1  is active
DEBUG: Merging existing variants '' into variants
DEBUG: new fully merged portvariants: 
DEBUG: Changing to port directory: /Users/ci/devel/repos/macports/trunk/dports/sysutils/python_select
DEBUG: OS darwin/11.4.0 (Mac OS X 10.7) arch i386
DEBUG: org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
DEBUG: org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
DEBUG: org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
DEBUG: Using group file /Users/ci/devel/repos/macports/trunk/dports/_resources/port1.0/group/select-1.0.tcl
DEBUG: universal_variant is false, so not adding the default universal variant
DEBUG: No need to upgrade! python_select 0.3_1 >= python_select 0.3_1
DEBUG: epoch: in tree: 0 installed: 0
DEBUG: swig 2.0.8_1 exists in the ports tree
DEBUG: swig 2.0.8_1  is the latest installed
DEBUG: swig 2.0.8_1  is active
DEBUG: Merging existing variants '' into variants
DEBUG: new fully merged portvariants: 
DEBUG: Changing to port directory: /Users/ci/devel/repos/macports/trunk/dports/devel/swig
DEBUG: OS darwin/11.4.0 (Mac OS X 10.7) arch i386
DEBUG: org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
DEBUG: org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
DEBUG: org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
DEBUG: adding the default universal variant
DEBUG: Reading variant descriptions from /Users/ci/devel/repos/macports/trunk/dports/_resources/port1.0/variant_descriptions.conf
DEBUG: No need to upgrade! swig 2.0.8_1 >= swig 2.0.8_1
DEBUG: epoch: in tree: 0 installed: 0
DEBUG: pcre 8.31_0 exists in the ports tree
DEBUG: pcre 8.31_0  is the latest installed
DEBUG: pcre 8.31_0  is active
DEBUG: Merging existing variants '' into variants
DEBUG: new fully merged portvariants: 
DEBUG: Changing to port directory: /Users/ci/devel/repos/macports/trunk/dports/devel/pcre
DEBUG: OS darwin/11.4.0 (Mac OS X 10.7) arch i386
DEBUG: org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
DEBUG: org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
DEBUG: org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
DEBUG: adding the default universal variant
DEBUG: Reading variant descriptions from /Users/ci/devel/repos/macports/trunk/dports/_resources/port1.0/variant_descriptions.conf
DEBUG: No need to upgrade! pcre 8.31_0 >= pcre 8.31_0
DEBUG: epoch: in tree: 20090923 installed: 20090923
DEBUG: libedit 20120601-3.0_0 exists in the ports tree
DEBUG: libedit 20120601-3.0_0  is the latest installed
DEBUG: libedit 20120601-3.0_0  is active
DEBUG: Merging existing variants '' into variants
DEBUG: new fully merged portvariants: 
DEBUG: Changing to port directory: /Users/ci/devel/repos/macports/trunk/dports/devel/libedit
DEBUG: OS darwin/11.4.0 (Mac OS X 10.7) arch i386
DEBUG: org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
DEBUG: org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
DEBUG: org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
DEBUG: Using group file /Users/ci/devel/repos/macports/trunk/dports/_resources/port1.0/group/muniversal-1.0.tcl
DEBUG: Reading variant descriptions from /Users/ci/devel/repos/macports/trunk/dports/_resources/port1.0/variant_descriptions.conf
DEBUG: universal variant already exists, so not adding the default one
DEBUG: No need to upgrade! libedit 20120601-3.0_0 >= libedit 20120601-3.0_0
DEBUG: epoch: in tree: 0 installed: 0
DEBUG: ncurses 5.9_1 exists in the ports tree
DEBUG: ncurses 5.9_1  is the latest installed
DEBUG: ncurses 5.9_1 +universal is active
DEBUG: Merging existing variants '+universal' into variants
DEBUG: new fully merged portvariants: universal +
DEBUG: Changing to port directory: /Users/ci/devel/repos/macports/trunk/dports/devel/ncurses
DEBUG: OS darwin/11.4.0 (Mac OS X 10.7) arch i386
DEBUG: org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
DEBUG: org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
DEBUG: org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
DEBUG: adding the default universal variant
DEBUG: Reading variant descriptions from /Users/ci/devel/repos/macports/trunk/dports/_resources/port1.0/variant_descriptions.conf
DEBUG: Executing variant universal provides universal
DEBUG: No need to upgrade! ncurses 5.9_1 >= ncurses 5.9_1
DEBUG: epoch: in tree: 0 installed: 0
DEBUG: zlib 1.2.7_0 exists in the ports tree
DEBUG: zlib 1.2.7_0  is the latest installed
DEBUG: zlib 1.2.7_0  is active
DEBUG: Merging existing variants '' into variants
DEBUG: new fully merged portvariants: 
DEBUG: Changing to port directory: /Users/ci/devel/repos/macports/trunk/dports/archivers/zlib
DEBUG: OS darwin/11.4.0 (Mac OS X 10.7) arch i386
DEBUG: org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
DEBUG: org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
DEBUG: org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
DEBUG: Using group file /Users/ci/devel/repos/macports/trunk/dports/_resources/port1.0/group/xcodeversion-1.0.tcl
DEBUG: adding the default universal variant
DEBUG: Reading variant descriptions from /Users/ci/devel/repos/macports/trunk/dports/_resources/port1.0/variant_descriptions.conf
DEBUG: No need to upgrade! zlib 1.2.7_0 >= zlib 1.2.7_0
DEBUG: epoch: in tree: 0 installed: 0
DEBUG: bzip2 1.0.6_0 exists in the ports tree
DEBUG: bzip2 1.0.6_0  is the latest installed
DEBUG: bzip2 1.0.6_0  is active
DEBUG: Merging existing variants '' into variants
DEBUG: new fully merged portvariants: 
DEBUG: Changing to port directory: /Users/ci/devel/repos/macports/trunk/dports/archivers/bzip2
DEBUG: OS darwin/11.4.0 (Mac OS X 10.7) arch i386
DEBUG: org.macports.load registered provides 'load', a pre-existing procedure. Target override will not be provided
DEBUG: org.macports.unload registered provides 'unload', a pre-existing procedure. Target override will not be provided
DEBUG: org.macports.distfiles registered provides 'distfiles', a pre-existing procedure. Target override will not be provided
DEBUG: Reading variant descriptions from /Users/ci/devel/repos/macports/trunk/dports/_resources/port1.0/variant_descriptions.conf
DEBUG: universal variant already exists, so not adding the default one
DEBUG: No need to upgrade! bzip2 1.0.6_0 >= bzip2 1.0.6_0
--->  Computing dependencies for xraylib:info:main .:debug:main Searching for dependency: swig-python
DEBUG: Found Dependency: receipt exists for swig-python

DEBUG: Executing org.macports.main (xraylib)
DEBUG: changing euid/egid - current euid: 0 - current egid: 0
DEBUG: egid changed to: 501
DEBUG: euid changed to: 502
DEBUG: fetch phase started at Wed Sep 19 14:17:36 CEST 2012
--->  Fetching distfiles for xraylib
DEBUG: Can't run fetch on this port without elevated privileges. Escalating privileges back to root.
DEBUG: euid changed to: 0. egid changed to: 0.
DEBUG: changing euid/egid - current euid: 0 - current egid: 0
DEBUG: egid changed to: 501
DEBUG: euid changed to: 502
DEBUG: Executing org.macports.fetch (xraylib)
--->  xraylib-2.16.0.tar.gz doesn't seem to exist in /opt/local/var/macports/distfiles/xraylib
--->  Attempting to fetch xraylib-2.16.0.tar.gz from http://lil.fr.distfiles.macports.org/xraylib
DEBUG: Fetching distfile failed:: The requested URL returned error: 404
--->  Attempting to fetch xraylib-2.16.0.tar.gz from http://mse.uk.distfiles.macports.org/sites/distfiles.macports.org/xraylib
DEBUG: Fetching distfile failed:: The requested URL returned error: 404
--->  Attempting to fetch xraylib-2.16.0.tar.gz from http://her.gr.distfiles.macports.org/mirrors/macports/mpdistfiles/xraylib
DEBUG: Fetching distfile failed:: The requested URL returned error: 404
--->  Attempting to fetch xraylib-2.16.0.tar.gz from http://fco.it.distfiles.macports.org/mirrors/macports-distfiles/xraylib
DEBUG: Fetching distfile failed:: The requested URL returned error: 404
--->  Attempting to fetch xraylib-2.16.0.tar.gz from https://github.com/tschoonj/xraylib/downloads/
DEBUG: Privilege de-escalation not attempted as not running as root.
DEBUG: checksum phase started at Wed Sep 19 14:17:56 CEST 2012
--->  Verifying checksum(s) for xraylib
DEBUG: Executing org.macports.checksum (xraylib)
--->  Checksumming xraylib-2.16.0.tar.gz
DEBUG: Correct (rmd160) checksum for xraylib-2.16.0.tar.gz
DEBUG: Correct (sha256) checksum for xraylib-2.16.0.tar.gz
DEBUG: Privilege de-escalation not attempted as not running as root.
DEBUG: extract phase started at Wed Sep 19 14:17:57 CEST 2012
--->  Extracting xraylib
DEBUG: Executing org.macports.extract (xraylib)
--->  Extracting xraylib-2.16.0.tar.gz
DEBUG: setting option extract.args to '/opt/local/var/macports/distfiles/xraylib/xraylib-2.16.0.tar.gz'
DEBUG: Environment: CPATH='/opt/local/include' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_Users_ci_devel_repos_macports_trunk_dports_science_xraylib/xraylib/work/.CC_PRINT_OPTIONS' LIBRARY_PATH='/opt/local/lib' CC_PRINT_OPTIONS='YES' MACOSX_DEPLOYMENT_TARGET='10.7'
DEBUG: Assembled command: 'cd "/opt/local/var/macports/build/_Users_ci_devel_repos_macports_trunk_dports_science_xraylib/xraylib/work" && /usr/bin/gzip -dc '/opt/local/var/macports/distfiles/xraylib/xraylib-2.16.0.tar.gz' | /usr/bin/gnutar --no-same-owner -xf -'
DEBUG: Executing command line:  cd "/opt/local/var/macports/build/_Users_ci_devel_repos_macports_trunk_dports_science_xraylib/xraylib/work" && /usr/bin/gzip -dc '/opt/local/var/macports/distfiles/xraylib/xraylib-2.16.0.tar.gz' | /usr/bin/gnutar --no-same-owner -xf - 
DEBUG: euid/egid changed to: 0/0
DEBUG: chowned /opt/local/var/macports/build/_Users_ci_devel_repos_macports_trunk_dports_science_xraylib/xraylib/work to macports
DEBUG: euid/egid changed to: 502/501
DEBUG: Privilege de-escalation not attempted as not running as root.
DEBUG: patch phase started at Wed Sep 19 14:17:57 CEST 2012
DEBUG: Executing org.macports.patch (xraylib)
DEBUG: Privilege de-escalation not attempted as not running as root.
DEBUG: configure phase started at Wed Sep 19 14:17:57 CEST 2012
--->  Configuring xraylib
DEBUG: Using compiler 'Mac OS X clang'
DEBUG: Executing org.macports.configure (xraylib)
DEBUG: Environment: CPATH='/opt/local/include' CFLAGS='-pipe -O2 -arch x86_64' CPPFLAGS='-I/opt/local/include' CXXFLAGS='-pipe -O2 -arch x86_64' LIBRARY_PATH='/opt/local/lib' MACOSX_DEPLOYMENT_TARGET='10.7' CXX='/usr/bin/clang++' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_Users_ci_devel_repos_macports_trunk_dports_science_xraylib/xraylib/work/.CC_PRINT_OPTIONS' F90FLAGS='-pipe -O2 -m64' LDFLAGS='-L/opt/local/lib -arch x86_64' OBJC='/usr/bin/clang' FCFLAGS='-pipe -O2 -m64' INSTALL='/usr/bin/install -c' OBJCFLAGS='-pipe -O2 -arch x86_64' FFLAGS='-pipe -O2 -m64' CC_PRINT_OPTIONS='YES' CC='/usr/bin/clang'
DEBUG: Assembled command: 'cd "/opt/local/var/macports/build/_Users_ci_devel_repos_macports_trunk_dports_science_xraylib/xraylib/work/xraylib-2.16.0" && ./configure --prefix=/opt/local --disable-idl --disable-fortran2003 --disable-perl --disable-java --disable-lua --enable-python --enable-python-integration'
DEBUG: Executing command line:  cd "/opt/local/var/macports/build/_Users_ci_devel_repos_macports_trunk_dports_science_xraylib/xraylib/work/xraylib-2.16.0" && ./configure --prefix=/opt/local --disable-idl --disable-fortran2003 --disable-perl --disable-java --disable-lua --enable-python --enable-python-integration 
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... build-aux/install-sh -c -d
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking build system type... x86_64-apple-darwin11.4.0
checking host system type... x86_64-apple-darwin11.4.0
checking for style of include used by make... GNU
checking for gcc... /usr/bin/clang
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether /usr/bin/clang accepts -g... yes
checking for /usr/bin/clang option to accept ISO C89... none needed
checking dependency style of /usr/bin/clang... gcc3
checking how to run the C preprocessor... /usr/bin/clang -E
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking minix/config.h usability... no
checking minix/config.h presence... no
checking for minix/config.h... no
checking whether it is safe to define __EXTENSIONS__... yes
checking for strndup... yes
checking for strdup... yes
checking for ar... ar
checking the archiver (ar) interface... ar
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for fgrep... /usr/bin/grep -F
checking for ld used by /usr/bin/clang... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... no
checking for BSD- or MS-compatible name lister (nm)... /opt/local/bin/nm
checking the name lister (/opt/local/bin/nm) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 196608
checking whether the shell understands some XSI constructs... yes
checking whether the shell understands "+="... yes
checking how to convert x86_64-apple-darwin11.4.0 file names to x86_64-apple-darwin11.4.0 format... func_convert_file_noop
checking how to convert x86_64-apple-darwin11.4.0 file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... no
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for archiver @FILE support... no
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /opt/local/bin/nm output from /usr/bin/clang object... ok
checking for sysroot... no
checking for mt... no
checking if : is a manifest tool... no
checking for dsymutil... dsymutil
checking for nmedit... nmedit
checking for lipo... lipo
checking for otool... otool
checking for otool64... no
checking for -single_module linker flag... yes
checking for -exported_symbols_list linker flag... yes
checking for -force_load linker flag... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if /usr/bin/clang supports -fno-rtti -fno-exceptions... yes
checking for /usr/bin/clang option to produce PIC... -fno-common -DPIC
checking if /usr/bin/clang PIC flag -fno-common -DPIC works... yes
checking if /usr/bin/clang static flag -static works... no
checking if /usr/bin/clang supports -c -o file.o... yes
checking if /usr/bin/clang supports -c -o file.o... (cached) yes
checking whether the /usr/bin/clang linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... darwin11.4.0 dyld
checking how to hardcode library paths into programs... immediate
checking for dlopen in -ldl... yes
checking whether a program can dlopen itself... yes
checking whether a statically linked program can dlopen itself... yes
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for gcc... (cached) /usr/bin/clang
checking whether we are using the GNU C compiler... (cached) yes
checking whether /usr/bin/clang accepts -g... (cached) yes
checking for /usr/bin/clang option to accept ISO C89... (cached) none needed
checking dependency style of /usr/bin/clang... (cached) gcc3
checking whether /usr/bin/clang and cc understand -c and -o together... yes
checking math.h usability... yes
checking math.h presence... yes
checking for math.h... yes
checking stdio.h usability... yes
checking stdio.h presence... yes
checking for stdio.h... yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking ctype.h usability... yes
checking ctype.h presence... yes
checking for ctype.h... yes
checking stddef.h usability... yes
checking stddef.h presence... yes
checking for stddef.h... yes
checking for log in -lm... yes
checking for exp in -lm... yes
checking for cos in -lm... yes
checking for sin in -lm... yes
checking for swig... swig
checking for find... find
checking for xargs... xargs
checking for python... /opt/local/bin/python
checking for python version... 3.2
checking for python platform... darwin
checking for python script directory... ${prefix}/lib/python3.2/site-packages
checking for python extension module directory... ${exec_prefix}/lib/python3.2/site-packages
checking for python3.2... (cached) /opt/local/bin/python
checking for a version of Python >= '2.1.0'... yes
checking for the distutils Python package... yes
checking for Python include path... -I/opt/local/Library/Frameworks/Python.framework/Versions/3.2/include/python3.2m
checking for Python library path... -L/opt/local/Library/Frameworks/Python.framework/Versions/3.2/lib/python3.2/config -lpython3.2
checking for Python site-packages scripts path... /opt/local/Library/Frameworks/Python.framework/Versions/3.2/lib/python3.2/site-packages
checking for Python site-packages extension modules path... /opt/local/Library/Frameworks/Python.framework/Versions/3.2/lib/python3.2/site-packages
checking python extra libraries...  -lintl -ldl  -framework CoreFoundation
checking python extra linking flags... -framework CoreFoundation  /opt/local/Library/Frameworks/Python.framework/Versions/3.2/Python
checking consistency of all components of python development environment... no
configure: WARNING:
  Could not link test program to Python. Maybe the main Python library has been
  installed in some non-standard library path.
  ============================================================================
   ERROR!
   You probably have to install the development version of the Python package
   for your distribution.  The exact name of this package varies among them.
  ============================================================================
           
configure: error: Incomplete python development package
Command failed:  cd "/opt/local/var/macports/build/_Users_ci_devel_repos_macports_trunk_dports_science_xraylib/xraylib/work/xraylib-2.16.0" && ./configure --prefix=/opt/local --disable-idl --disable-fortran2003 --disable-perl --disable-java --disable-lua --enable-python --enable-python-integration 
Exit code: 1
Error: org.macports.configure for port xraylib returned: configure failure: command execution failed
DEBUG: Error code: NONE
DEBUG: Backtrace: configure failure: command execution failed
Warning: targets not executed for xraylib: org.macports.build org.macports.configure
Please see the log file for port xraylib for details: