| 1 | sudo port install dolfin |
|---|
| 2 | ---> Computing dependencies for dolfin |
|---|
| 3 | ---> Dependencies to be installed: petsc py27-ffc py27-ferari swig-python swig py27-fiat py27-numpy py27-nose nosetests_select py27-setuptools py27-scientific netcdf py27-instant py27-ufl ufc py27-ply slepc |
|---|
| 4 | Portfile changed since last build; discarding previous state. |
|---|
| 5 | ---> Fetching archive for petsc |
|---|
| 6 | ---> Attempting to fetch petsc-3.4.3_1+accelerate+mpich.darwin_13.x86_64.tbz2 from http://packages.macports.org/petsc |
|---|
| 7 | ---> Attempting to fetch petsc-3.4.3_1+accelerate+mpich.darwin_13.x86_64.tbz2 from http://lil.fr.packages.macports.org/petsc |
|---|
| 8 | ---> Attempting to fetch petsc-3.4.3_1+accelerate+mpich.darwin_13.x86_64.tbz2 from http://mse.uk.packages.macports.org/sites/packages.macports.org/petsc |
|---|
| 9 | ---> Fetching distfiles for petsc |
|---|
| 10 | ---> Verifying checksums for petsc |
|---|
| 11 | ---> Extracting petsc |
|---|
| 12 | ---> Configuring petsc |
|---|
| 13 | ---> Building petsc |
|---|
| 14 | ---> Staging petsc into destroot |
|---|
| 15 | ---> Installing petsc @3.4.3_1+accelerate+mpich |
|---|
| 16 | ---> Activating petsc @3.4.3_1+accelerate+mpich |
|---|
| 17 | |
|---|
| 18 | Add the following line to your .bash_profile if you plan to use the PETSC makefile rules in /opt/local/lib/petsc/conf: |
|---|
| 19 | export PETSC_DIR=/opt/local/lib/petsc |
|---|
| 20 | |
|---|
| 21 | ---> Cleaning petsc |
|---|
| 22 | ---> Fetching archive for swig |
|---|
| 23 | ---> Attempting to fetch swig-2.0.11_0.darwin_13.x86_64.tbz2 from http://packages.macports.org/swig |
|---|
| 24 | ---> Attempting to fetch swig-2.0.11_0.darwin_13.x86_64.tbz2.rmd160 from http://packages.macports.org/swig |
|---|
| 25 | ---> Installing swig @2.0.11_0 |
|---|
| 26 | ---> Activating swig @2.0.11_0 |
|---|
| 27 | ---> Cleaning swig |
|---|
| 28 | ---> Fetching archive for swig-python |
|---|
| 29 | ---> Attempting to fetch swig-python-2.0.11_0.darwin_13.noarch.tbz2 from http://packages.macports.org/swig-python |
|---|
| 30 | ---> Attempting to fetch swig-python-2.0.11_0.darwin_13.noarch.tbz2.rmd160 from http://packages.macports.org/swig-python |
|---|
| 31 | ---> Installing swig-python @2.0.11_0 |
|---|
| 32 | ---> Activating swig-python @2.0.11_0 |
|---|
| 33 | ---> Cleaning swig-python |
|---|
| 34 | ---> Fetching archive for py27-ferari |
|---|
| 35 | ---> Attempting to fetch py27-ferari-1.0.0_0.darwin_13.noarch.tbz2 from http://packages.macports.org/py27-ferari |
|---|
| 36 | ---> Attempting to fetch py27-ferari-1.0.0_0.darwin_13.noarch.tbz2 from http://lil.fr.packages.macports.org/py27-ferari |
|---|
| 37 | ---> Attempting to fetch py27-ferari-1.0.0_0.darwin_13.noarch.tbz2 from http://mse.uk.packages.macports.org/sites/packages.macports.org/py27-ferari |
|---|
| 38 | ---> Fetching distfiles for py27-ferari |
|---|
| 39 | ---> Attempting to fetch 208a515cad05.tar.gz from http://distfiles.macports.org/py-ferari |
|---|
| 40 | ---> Verifying checksums for py27-ferari |
|---|
| 41 | ---> Extracting py27-ferari |
|---|
| 42 | ---> Configuring py27-ferari |
|---|
| 43 | ---> Building py27-ferari |
|---|
| 44 | ---> Staging py27-ferari into destroot |
|---|
| 45 | ---> Installing py27-ferari @1.0.0_0 |
|---|
| 46 | ---> Activating py27-ferari @1.0.0_0 |
|---|
| 47 | ---> Cleaning py27-ferari |
|---|
| 48 | ---> Fetching archive for nosetests_select |
|---|
| 49 | ---> Attempting to fetch nosetests_select-0.1_0.darwin_13.noarch.tbz2 from http://packages.macports.org/nosetests_select |
|---|
| 50 | ---> Attempting to fetch nosetests_select-0.1_0.darwin_13.noarch.tbz2.rmd160 from http://packages.macports.org/nosetests_select |
|---|
| 51 | ---> Installing nosetests_select @0.1_0 |
|---|
| 52 | ---> Activating nosetests_select @0.1_0 |
|---|
| 53 | ---> Cleaning nosetests_select |
|---|
| 54 | ---> Fetching archive for py27-setuptools |
|---|
| 55 | ---> Attempting to fetch py27-setuptools-2.1_0.darwin_13.noarch.tbz2 from http://packages.macports.org/py27-setuptools |
|---|
| 56 | ---> Attempting to fetch py27-setuptools-2.1_0.darwin_13.noarch.tbz2.rmd160 from http://packages.macports.org/py27-setuptools |
|---|
| 57 | ---> Installing py27-setuptools @2.1_0 |
|---|
| 58 | ---> Activating py27-setuptools @2.1_0 |
|---|
| 59 | ---> Cleaning py27-setuptools |
|---|
| 60 | ---> Fetching archive for py27-nose |
|---|
| 61 | ---> Attempting to fetch py27-nose-1.3.0_0.darwin_13.noarch.tbz2 from http://packages.macports.org/py27-nose |
|---|
| 62 | ---> Attempting to fetch py27-nose-1.3.0_0.darwin_13.noarch.tbz2.rmd160 from http://packages.macports.org/py27-nose |
|---|
| 63 | ---> Installing py27-nose @1.3.0_0 |
|---|
| 64 | ---> Activating py27-nose @1.3.0_0 |
|---|
| 65 | ---> Cleaning py27-nose |
|---|
| 66 | ---> Fetching archive for py27-numpy |
|---|
| 67 | ---> Attempting to fetch py27-numpy-1.8.0_2.darwin_13.x86_64.tbz2 from http://packages.macports.org/py27-numpy |
|---|
| 68 | ---> Attempting to fetch py27-numpy-1.8.0_2.darwin_13.x86_64.tbz2.rmd160 from http://packages.macports.org/py27-numpy |
|---|
| 69 | ---> Installing py27-numpy @1.8.0_2 |
|---|
| 70 | ---> Activating py27-numpy @1.8.0_2 |
|---|
| 71 | ---> Cleaning py27-numpy |
|---|
| 72 | ---> Fetching archive for netcdf |
|---|
| 73 | ---> Attempting to fetch netcdf-4.3.0_2+dap+netcdf4.darwin_13.x86_64.tbz2 from http://packages.macports.org/netcdf |
|---|
| 74 | ---> Attempting to fetch netcdf-4.3.0_2+dap+netcdf4.darwin_13.x86_64.tbz2.rmd160 from http://packages.macports.org/netcdf |
|---|
| 75 | ---> Installing netcdf @4.3.0_2+dap+netcdf4 |
|---|
| 76 | ---> Activating netcdf @4.3.0_2+dap+netcdf4 |
|---|
| 77 | |
|---|
| 78 | As of version 4.2 c++ and fortran interfaces are separate ports, netcdf-cxx and netcdf-fortran, respectively. |
|---|
| 79 | |
|---|
| 80 | ---> Cleaning netcdf |
|---|
| 81 | ---> Fetching archive for py27-scientific |
|---|
| 82 | ---> Attempting to fetch py27-scientific-2.9.2_2.darwin_13.x86_64.tbz2 from http://packages.macports.org/py27-scientific |
|---|
| 83 | ---> Attempting to fetch py27-scientific-2.9.2_2.darwin_13.x86_64.tbz2.rmd160 from http://packages.macports.org/py27-scientific |
|---|
| 84 | ---> Installing py27-scientific @2.9.2_2 |
|---|
| 85 | ---> Activating py27-scientific @2.9.2_2 |
|---|
| 86 | ---> Cleaning py27-scientific |
|---|
| 87 | ---> Fetching archive for py27-fiat |
|---|
| 88 | ---> Attempting to fetch py27-fiat-1.3.0_0.darwin_13.noarch.tbz2 from http://packages.macports.org/py27-fiat |
|---|
| 89 | ---> Attempting to fetch py27-fiat-1.3.0_0.darwin_13.noarch.tbz2.rmd160 from http://packages.macports.org/py27-fiat |
|---|
| 90 | ---> Installing py27-fiat @1.3.0_0 |
|---|
| 91 | ---> Activating py27-fiat @1.3.0_0 |
|---|
| 92 | ---> Cleaning py27-fiat |
|---|
| 93 | ---> Fetching archive for py27-instant |
|---|
| 94 | ---> Attempting to fetch py27-instant-1.3.0_0.darwin_13.noarch.tbz2 from http://packages.macports.org/py27-instant |
|---|
| 95 | ---> Attempting to fetch py27-instant-1.3.0_0.darwin_13.noarch.tbz2.rmd160 from http://packages.macports.org/py27-instant |
|---|
| 96 | ---> Installing py27-instant @1.3.0_0 |
|---|
| 97 | ---> Activating py27-instant @1.3.0_0 |
|---|
| 98 | ---> Cleaning py27-instant |
|---|
| 99 | ---> Fetching archive for py27-ufl |
|---|
| 100 | ---> Attempting to fetch py27-ufl-1.3.0_0.darwin_13.noarch.tbz2 from http://packages.macports.org/py27-ufl |
|---|
| 101 | ---> Attempting to fetch py27-ufl-1.3.0_0.darwin_13.noarch.tbz2.rmd160 from http://packages.macports.org/py27-ufl |
|---|
| 102 | ---> Installing py27-ufl @1.3.0_0 |
|---|
| 103 | ---> Activating py27-ufl @1.3.0_0 |
|---|
| 104 | ---> Cleaning py27-ufl |
|---|
| 105 | ---> Fetching archive for ufc |
|---|
| 106 | ---> Attempting to fetch ufc-2.3.0_0.darwin_13.x86_64.tbz2 from http://packages.macports.org/ufc |
|---|
| 107 | ---> Attempting to fetch ufc-2.3.0_0.darwin_13.x86_64.tbz2 from http://lil.fr.packages.macports.org/ufc |
|---|
| 108 | ---> Attempting to fetch ufc-2.3.0_0.darwin_13.x86_64.tbz2 from http://mse.uk.packages.macports.org/sites/packages.macports.org/ufc |
|---|
| 109 | ---> Fetching distfiles for ufc |
|---|
| 110 | ---> Attempting to fetch ufc-2.3.0.tar.gz from http://distfiles.macports.org/ufc |
|---|
| 111 | ---> Verifying checksums for ufc |
|---|
| 112 | ---> Extracting ufc |
|---|
| 113 | ---> Configuring ufc |
|---|
| 114 | ---> Building ufc |
|---|
| 115 | ---> Staging ufc into destroot |
|---|
| 116 | ---> Installing ufc @2.3.0_0 |
|---|
| 117 | ---> Activating ufc @2.3.0_0 |
|---|
| 118 | ---> Cleaning ufc |
|---|
| 119 | ---> Fetching archive for py27-ffc |
|---|
| 120 | ---> Attempting to fetch py27-ffc-1.3.0_0.darwin_13.noarch.tbz2 from http://packages.macports.org/py27-ffc |
|---|
| 121 | ---> Attempting to fetch py27-ffc-1.3.0_0.darwin_13.noarch.tbz2 from http://lil.fr.packages.macports.org/py27-ffc |
|---|
| 122 | ---> Attempting to fetch py27-ffc-1.3.0_0.darwin_13.noarch.tbz2 from http://mse.uk.packages.macports.org/sites/packages.macports.org/py27-ffc |
|---|
| 123 | ---> Fetching distfiles for py27-ffc |
|---|
| 124 | ---> Attempting to fetch ffc-1.3.0.tar.gz from http://distfiles.macports.org/py-ffc |
|---|
| 125 | ---> Verifying checksums for py27-ffc |
|---|
| 126 | ---> Extracting py27-ffc |
|---|
| 127 | ---> Configuring py27-ffc |
|---|
| 128 | ---> Building py27-ffc |
|---|
| 129 | ---> Staging py27-ffc into destroot |
|---|
| 130 | ---> Installing py27-ffc @1.3.0_0 |
|---|
| 131 | ---> Activating py27-ffc @1.3.0_0 |
|---|
| 132 | ---> Cleaning py27-ffc |
|---|
| 133 | ---> Fetching archive for py27-ply |
|---|
| 134 | ---> Attempting to fetch py27-ply-3.4_1.darwin_13.noarch.tbz2 from http://packages.macports.org/py27-ply |
|---|
| 135 | ---> Attempting to fetch py27-ply-3.4_1.darwin_13.noarch.tbz2.rmd160 from http://packages.macports.org/py27-ply |
|---|
| 136 | ---> Installing py27-ply @3.4_1 |
|---|
| 137 | ---> Activating py27-ply @3.4_1 |
|---|
| 138 | ---> Cleaning py27-ply |
|---|
| 139 | ---> Fetching archive for slepc |
|---|
| 140 | ---> Attempting to fetch slepc-3.4.3_0.darwin_13.x86_64.tbz2 from http://packages.macports.org/slepc |
|---|
| 141 | ---> Attempting to fetch slepc-3.4.3_0.darwin_13.x86_64.tbz2 from http://lil.fr.packages.macports.org/slepc |
|---|
| 142 | ---> Attempting to fetch slepc-3.4.3_0.darwin_13.x86_64.tbz2 from http://mse.uk.packages.macports.org/sites/packages.macports.org/slepc |
|---|
| 143 | ---> Fetching distfiles for slepc |
|---|
| 144 | ---> Attempting to fetch v3.4.3.tar.gz from http://distfiles.macports.org/slepc |
|---|
| 145 | ---> Verifying checksums for slepc |
|---|
| 146 | ---> Extracting slepc |
|---|
| 147 | ---> Configuring slepc |
|---|
| 148 | ---> Building slepc |
|---|
| 149 | ---> Staging slepc into destroot |
|---|
| 150 | ---> Installing slepc @3.4.3_0 |
|---|
| 151 | ---> Activating slepc @3.4.3_0 |
|---|
| 152 | |
|---|
| 153 | Add the following lines to your .bash_profile if you plan to use the PETSC/SLEPC makefile rules in /opt/local/lib/petsc/conf: |
|---|
| 154 | export PETSC_DIR=/opt/local/lib/petsc |
|---|
| 155 | export SLEPC_DIR=/opt/local/lib/petsc |
|---|
| 156 | |
|---|
| 157 | ---> Cleaning slepc |
|---|
| 158 | ---> Fetching archive for dolfin |
|---|
| 159 | ---> Attempting to fetch dolfin-1.3.0_0+cgal+mpich+parmetis+petsc+slepc+suitesparse.darwin_13.x86_64.tbz2 from http://packages.macports.org/dolfin |
|---|
| 160 | ---> Attempting to fetch dolfin-1.3.0_0+cgal+mpich+parmetis+petsc+slepc+suitesparse.darwin_13.x86_64.tbz2 from http://lil.fr.packages.macports.org/dolfin |
|---|
| 161 | ---> Attempting to fetch dolfin-1.3.0_0+cgal+mpich+parmetis+petsc+slepc+suitesparse.darwin_13.x86_64.tbz2 from http://mse.uk.packages.macports.org/sites/packages.macports.org/dolfin |
|---|
| 162 | ---> Fetching distfiles for dolfin |
|---|
| 163 | ---> Attempting to fetch dolfin-1.3.0.tar.gz from http://distfiles.macports.org/dolfin |
|---|
| 164 | ---> Verifying checksums for dolfin |
|---|
| 165 | ---> Extracting dolfin |
|---|
| 166 | ---> Configuring dolfin |
|---|
| 167 | Error: Install boost +mpich |
|---|
| 168 | Error: org.macports.configure for port dolfin returned: boost +mpich not installed |
|---|
| 169 | Please see the log file for port dolfin for details: |
|---|
| 170 | /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_dolfin/dolfin/main.log |
|---|
| 171 | To report a bug, follow the instructions in the guide: |
|---|
| 172 | http://guide.macports.org/#project.tickets |
|---|
| 173 | Error: Processing of port dolfin failed |
|---|
