| 1 | version:1 |
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| 2 | :msg:clean ---> Computing dependencies for petsc:info:clean .:debug:clean petsc has no conflicts |
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| 3 | :debug:clean Searching for dependency: sowing |
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| 4 | :debug:clean Found Dependency: receipt exists for sowing |
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| 5 | :debug:clean Searching for dependency: c2html |
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| 6 | :debug:clean Found Dependency: receipt exists for c2html |
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| 7 | :debug:clean Searching for dependency: openmpi-default |
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| 8 | :debug:clean Found Dependency: receipt exists for openmpi-default |
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| 9 | :debug:clean Searching for dependency: SuiteSparse |
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| 10 | :debug:clean Found Dependency: receipt exists for SuiteSparse |
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| 11 | :debug:clean Searching for dependency: superlu |
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| 12 | :debug:clean Found Dependency: receipt exists for superlu |
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| 13 | :debug:clean Searching for dependency: metis |
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| 14 | :debug:clean Found Dependency: receipt exists for metis |
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| 15 | :debug:clean Searching for dependency: parmetis |
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| 16 | :debug:clean Found Dependency: receipt exists for parmetis |
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| 17 | :debug:clean Searching for dependency: mumps |
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| 18 | :debug:clean Found Dependency: receipt exists for mumps |
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| 19 | :debug:clean Searching for dependency: hypre |
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| 20 | :debug:clean Found Dependency: receipt exists for hypre |
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| 21 | :msg:clean |
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| 22 | :debug:main Executing org.macports.main (petsc) |
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| 23 | :debug:main changing euid/egid - current euid: 0 - current egid: 0 |
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| 24 | :debug:main egid changed to: 501 |
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| 25 | :debug:main euid changed to: 503 |
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| 26 | :debug:main Skipping completed org.macports.archivefetch (petsc) |
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| 27 | :debug:main Privilege de-escalation not attempted as not running as root. |
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| 28 | :debug:main Skipping completed org.macports.fetch (petsc) |
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| 29 | :debug:main Privilege de-escalation not attempted as not running as root. |
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| 30 | :debug:main Skipping completed org.macports.checksum (petsc) |
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| 31 | :debug:main Privilege de-escalation not attempted as not running as root. |
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| 32 | :debug:main Skipping completed org.macports.extract (petsc) |
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| 33 | :debug:main Privilege de-escalation not attempted as not running as root. |
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| 34 | :debug:main Skipping completed org.macports.patch (petsc) |
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| 35 | :debug:main Privilege de-escalation not attempted as not running as root. |
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| 36 | :debug:configure configure phase started at Thu Jul 31 10:42:13 IST 2014 |
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| 37 | :notice:configure ---> Configuring petsc |
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| 38 | :debug:configure Using compiler 'Xcode Clang' |
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| 39 | :debug:configure Executing proc-pre-org.macports.configure-configure-0 |
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| 40 | :debug:configure Active variants check for source-type install considers depends_fetch depends_extract depends_lib depends_build depends_run: openmpi-default SuiteSparse superlu metis parmetis mumps hypre sowing c2html |
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| 41 | :debug:configure Ignoring active_variants requirement for openmpi because source-type install only considers depends_fetch depends_extract depends_lib depends_build depends_run and those do not contain openmpi |
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| 42 | :debug:configure Executing proc-pre-org.macports.configure-configure-1 |
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| 43 | :debug:configure Executing org.macports.configure (petsc) |
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| 44 | :debug:configure Environment: |
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| 45 | CC='mpicc-openmpi-mp' |
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| 46 | CC_PRINT_OPTIONS='YES' |
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| 47 | CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_petsc/petsc/work/.CC_PRINT_OPTIONS' |
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| 48 | CFLAGS='-pipe -Os -arch x86_64' |
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| 49 | CPATH='/opt/local/include' |
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| 50 | CPPFLAGS='-I/opt/local/include' |
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| 51 | CXX='mpicxx-openmpi-mp' |
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| 52 | CXXFLAGS='-pipe -Os -arch x86_64' |
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| 53 | F77='mpif77-openmpi-mp' |
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| 54 | F77FLAGS='-m64' |
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| 55 | F90='mpif90-openmpi-mp' |
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| 56 | F90FLAGS='-pipe -Os -m64' |
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| 57 | FC='mpif90-openmpi-mp' |
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| 58 | FCFLAGS='-pipe -Os -m64' |
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| 59 | FFLAGS='-pipe -Os' |
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| 60 | INSTALL='/usr/bin/install -c' |
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| 61 | LDFLAGS='-L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64' |
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| 62 | LIBRARY_PATH='/opt/local/lib' |
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| 63 | MACOSX_DEPLOYMENT_TARGET='10.9' |
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| 64 | OBJC='/usr/bin/clang' |
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| 65 | OBJCFLAGS='-pipe -Os -arch x86_64' |
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| 66 | OBJCXX='/usr/bin/clang++' |
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| 67 | OBJCXXFLAGS='-pipe -Os -arch x86_64' |
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| 68 | :debug:configure Assembled command: 'cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_petsc/petsc/work/v3.5" && ./configure --prefix=/opt/local --prefix=/opt/local/lib/petsc --with-valgrind=0 --with-shared-libraries --with-c2html-dir=/opt/local --without-x --with-blas-lapack-lib=/System/Library/Frameworks/Accelerate.framework/Versions/Current/Accelerate --with-cholmod-dir=/opt/local --with-umfpack-dir=/opt/local --with-superlu-dir=/opt/local --with-metis-dir=/opt/local --with-parmetis-dir=/opt/local --with-scalapack-dir=/opt/local --with-mumps-dir=/opt/local --with-hypre-dir=/opt/local --CC="mpicc-openmpi-mp" --CXX="mpicxx-openmpi-mp" --FC="mpif90-openmpi-mp" --COPTFLAGS="-Os" --CXXOPTFLAGS="-Os" --FOPTFLAGS="-Os" --LDFLAGS="-L/opt/local/lib -Wl,-headerpad_max_install_names" --CFLAGS="-Os" --CXXFLAGS="-Os" --with-mpiexec=mpiexec-openmpi-mp' |
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| 69 | :debug:configure Executing command line: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_petsc/petsc/work/v3.5" && ./configure --prefix=/opt/local --prefix=/opt/local/lib/petsc --with-valgrind=0 --with-shared-libraries --with-c2html-dir=/opt/local --without-x --with-blas-lapack-lib=/System/Library/Frameworks/Accelerate.framework/Versions/Current/Accelerate --with-cholmod-dir=/opt/local --with-umfpack-dir=/opt/local --with-superlu-dir=/opt/local --with-metis-dir=/opt/local --with-parmetis-dir=/opt/local --with-scalapack-dir=/opt/local --with-mumps-dir=/opt/local --with-hypre-dir=/opt/local --CC="mpicc-openmpi-mp" --CXX="mpicxx-openmpi-mp" --FC="mpif90-openmpi-mp" --COPTFLAGS="-Os" --CXXOPTFLAGS="-Os" --FOPTFLAGS="-Os" --LDFLAGS="-L/opt/local/lib -Wl,-headerpad_max_install_names" --CFLAGS="-Os" --CXXFLAGS="-Os" --with-mpiexec=mpiexec-openmpi-mp |
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| 70 | :info:configure =============================================================================== |
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| 71 | :info:configure Configuring PETSc to compile on your system |
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| 72 | :info:configure =============================================================================== |
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| 73 | :info:configure ******************************************************************************* |
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| 74 | :info:configure ERROR in COMMAND LINE ARGUMENT to ./configure |
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| 75 | :info:configure ------------------------------------------------------------------------------- |
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| 76 | :info:configure The option --with-cholmod-dir=/opt/local should probably be --with-suitesparse-dir=/opt/local |
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| 77 | :info:configure ******************************************************************************* |
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| 78 | :info:configure |
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| 79 | :info:configure Command failed: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_petsc/petsc/work/v3.5" && ./configure --prefix=/opt/local --prefix=/opt/local/lib/petsc --with-valgrind=0 --with-shared-libraries --with-c2html-dir=/opt/local --without-x --with-blas-lapack-lib=/System/Library/Frameworks/Accelerate.framework/Versions/Current/Accelerate --with-cholmod-dir=/opt/local --with-umfpack-dir=/opt/local --with-superlu-dir=/opt/local --with-metis-dir=/opt/local --with-parmetis-dir=/opt/local --with-scalapack-dir=/opt/local --with-mumps-dir=/opt/local --with-hypre-dir=/opt/local --CC="mpicc-openmpi-mp" --CXX="mpicxx-openmpi-mp" --FC="mpif90-openmpi-mp" --COPTFLAGS="-Os" --CXXOPTFLAGS="-Os" --FOPTFLAGS="-Os" --LDFLAGS="-L/opt/local/lib -Wl,-headerpad_max_install_names" --CFLAGS="-Os" --CXXFLAGS="-Os" --with-mpiexec=mpiexec-openmpi-mp |
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| 80 | :info:configure Exit code: 1 |
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| 81 | :error:configure org.macports.configure for port petsc returned: configure failure: command execution failed |
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| 82 | :debug:configure Error code: NONE |
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| 83 | :debug:configure Backtrace: configure failure: command execution failed |
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| 84 | while executing |
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| 85 | "portconfigure::configure_main org.macports.configure" |
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| 86 | ("eval" body line 1) |
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| 87 | invoked from within |
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| 88 | "eval $procedure $targetname" |
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| 89 | :info:configure Warning: targets not executed for petsc: org.macports.install org.macports.configure org.macports.build org.macports.destroot |
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| 90 | :notice:configure Please see the log file for port petsc for details: |
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| 91 | /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_petsc/petsc/main.log |
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