Ticket #46649: fits.diff

File fits.diff, 16.9 KB (added by Schamschula (Marius Schamschula), 9 years ago)
Line 
1--- fits-debug-1.0      2015-01-22 12:12:56.000000000 -0600
2+++ fits-debug-1.1      2015-01-22 12:14:57.000000000 -0600
3@@ -1,7 +1,7 @@
4 DEBUG: Copying /Users/marius/Library/Preferences/com.apple.dt.Xcode.plist to /opt/local/var/macports/home/Library/Preferences
5 DEBUG: Changing to port directory: /Users/marius/Development/MacPorts/ports/math/octave-fits
6 DEBUG: OS darwin/13.4.0 (Mac OS X 10.9) arch i386
7-DEBUG: Sourcing PortGroup octave 1.0 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/octave-1.0.tcl
8+DEBUG: Sourcing PortGroup octave 1.1 from /opt/local/var/macports/sources/rsync.macports.org/release/tarballs/ports/_resources/port1.0/group/octave-1.1.tcl
9 DEBUG: universal_variant is false, so not adding the default universal variant
10 DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies
11 DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies
12@@ -2200,7 +2200,7 @@
13 DEBUG: changing euid/egid - current euid: 0 - current egid: 0
14 DEBUG: egid changed to: 501
15 DEBUG: euid changed to: 503
16-DEBUG: archivefetch phase started at Thu Jan 22 12:11:49 CST 2015
17+DEBUG: archivefetch phase started at Thu Jan 22 12:14:29 CST 2015
18 --->  Fetching archive for octave-fits
19 DEBUG: Executing org.macports.archivefetch (octave-fits)
20 DEBUG: euid/egid changed to: 0/0
21@@ -2215,7 +2215,7 @@
22 --->  Attempting to fetch octave-fits-1.0.5_0.darwin_13.x86_64.tbz2 from http://mse.uk.packages.macports.org/sites/packages.macports.org/octave-fits
23   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
24                                  Dload  Upload   Total   Spent    Left  Speed
25-
26  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
27100   294  100   294    0     0    985      0 --:--:-- --:--:-- --:--:--   986
28+
29  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
30  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
31100   294  100   294    0     0   1029      0 --:--:-- --:--:-- --:--:--  1027
32 
33  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
34 DEBUG: Fetching archive failed:: The requested URL returned error: 404 Not Found
35 --->  Attempting to fetch octave-fits-1.0.5_0.darwin_13.x86_64.tbz2 from http://nue.de.packages.macports.org/macports/packages/octave-fits
36@@ -2224,11 +2224,11 @@
37 
38  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
39  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
40 DEBUG: Fetching archive failed:: The requested URL returned error: 404 Not Found
41 DEBUG: Privilege de-escalation not attempted as not running as root.
42-DEBUG: fetch phase started at Thu Jan 22 12:11:51 CST 2015
43+DEBUG: fetch phase started at Thu Jan 22 12:14:30 CST 2015
44 --->  Fetching distfiles for octave-fits
45 DEBUG: Executing org.macports.fetch (octave-fits)
46 DEBUG: Privilege de-escalation not attempted as not running as root.
47-DEBUG: checksum phase started at Thu Jan 22 12:11:51 CST 2015
48+DEBUG: checksum phase started at Thu Jan 22 12:14:30 CST 2015
49 --->  Verifying checksums for octave-fits
50 DEBUG: Executing org.macports.checksum (octave-fits)
51 --->  Checksumming fits-1.0.5.tar.gz
52@@ -2237,7 +2237,7 @@
53 DEBUG: Calculated (sha256) is 58f79a499004402a81938b26eecf3bdcf0e02385ca2125ca9079c92016502718
54 DEBUG: Correct (sha256) checksum for fits-1.0.5.tar.gz
55 DEBUG: Privilege de-escalation not attempted as not running as root.
56-DEBUG: extract phase started at Thu Jan 22 12:11:51 CST 2015
57+DEBUG: extract phase started at Thu Jan 22 12:14:30 CST 2015
58 --->  Extracting octave-fits
59 DEBUG: Executing org.macports.extract (octave-fits)
60 --->  Extracting fits-1.0.5.tar.gz
61@@ -2255,9 +2255,13 @@
62 DEBUG: euid/egid changed to: 503/501
63 DEBUG: Executing proc-post-org.macports.extract-extract-0
64 DEBUG: Privilege de-escalation not attempted as not running as root.
65-DEBUG: patch phase started at Thu Jan 22 12:11:51 CST 2015
66+DEBUG: patch phase started at Thu Jan 22 12:14:31 CST 2015
67 DEBUG: Executing org.macports.patch (octave-fits)
68-DEBUG: Executing proc-post-org.macports.patch-patch-0
69+DEBUG: Privilege de-escalation not attempted as not running as root.
70+DEBUG: configure phase started at Thu Jan 22 12:14:31 CST 2015
71+--->  Configuring octave-fits
72+DEBUG: Using compiler 'Xcode Clang'
73+DEBUG: Executing org.macports.configure (octave-fits)
74 --->  Patching DESCRIPTION: /Autoload/s@yes@no@g
75 DEBUG: Executing reinplace: /usr/bin/sed /Autoload/s@yes@no@g < /opt/local/var/macports/build/_Users_marius_Development_MacPorts_ports_math_octave-fits/octave-fits/work/fits/DESCRIPTION >@ file10 2>@stderr
76 DEBUG: euid/egid changed to: 0/0
77@@ -2268,52 +2272,37 @@
78 DEBUG: euid/egid changed to: 503/501
79 xinstall: mkdir /opt/local/var/macports/build/_Users_marius_Development_MacPorts_ports_math_octave-fits/octave-fits/work/fits
80 DEBUG: Privilege de-escalation not attempted as not running as root.
81-DEBUG: configure phase started at Thu Jan 22 12:11:51 CST 2015
82---->  Configuring octave-fits
83-DEBUG: Using compiler 'Xcode Clang'
84-DEBUG: Executing proc-pre-org.macports.configure-configure-0
85-DEBUG: Executing org.macports.configure (octave-fits)
86+DEBUG: build phase started at Thu Jan 22 12:14:31 CST 2015
87+--->  Building octave-fits
88+DEBUG: Executing proc-pre-org.macports.build-build-0
89+DEBUG: Executing org.macports.build (octave-fits)
90+DEBUG: port disallows a parallel build
91 DEBUG: Environment:
92-CC='/usr/bin/clang'
93 CC_PRINT_OPTIONS='YES'
94 CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_Users_marius_Development_MacPorts_ports_math_octave-fits/octave-fits/work/.CC_PRINT_OPTIONS'
95-CFLAGS='-pipe -Os -arch x86_64'
96 CPATH='/opt/local/include'
97-CPPFLAGS='-I/opt/local/include'
98-CXX='/usr/bin/clang++'
99-CXXFLAGS='-pipe -Os -arch x86_64 -stdlib=libc++'
100-F77FLAGS='-m64'
101-F90FLAGS='-pipe -Os -m64'
102-FCFLAGS='-pipe -Os -m64'
103-FFLAGS='-pipe -Os'
104-INSTALL='/usr/bin/install -c'
105 LAPACK_LIBS='-L/opt/local/lib -L/opt/local/lib/gcc48/gcc/x86_64-apple-darwin13/4.8.4 -L/opt/local/lib/gcc48/gcc/x86_64-apple-darwin13/4.8.4/../../.. -lgfortran -lquadmath -lm -llapack'
106 LC_CTYPE='C'
107-LDFLAGS='-L/opt/local/lib -Wl,-headerpad_max_install_names -arch x86_64'
108 LIBRARY_PATH='/opt/local/lib'
109 MACOSX_DEPLOYMENT_TARGET='10.9'
110-OBJC='/usr/bin/clang'
111-OBJCFLAGS='-pipe -Os -arch x86_64'
112-OBJCXX='/usr/bin/clang++'
113-OBJCXXFLAGS='-pipe -Os -arch x86_64 -stdlib=libc++'
114-DEBUG: Assembled command: 'cd "/opt/local/var/macports/build/_Users_marius_Development_MacPorts_ports_math_octave-fits/octave-fits/work/fits" && /opt/local/bin/octave -q -f --eval 'pkg build -verbose -nodeps /opt/local/var/macports/build/_Users_marius_Development_MacPorts_ports_math_octave-fits/octave-fits/work/fits /opt/local/var/macports/build/_Users_marius_Development_MacPorts_ports_math_octave-fits/octave-fits/work/.tmp/fits.tar.gz''
115-DEBUG: Executing command line:  cd "/opt/local/var/macports/build/_Users_marius_Development_MacPorts_ports_math_octave-fits/octave-fits/work/fits" && /opt/local/bin/octave -q -f --eval 'pkg build -verbose -nodeps /opt/local/var/macports/build/_Users_marius_Development_MacPorts_ports_math_octave-fits/octave-fits/work/fits /opt/local/var/macports/build/_Users_marius_Development_MacPorts_ports_math_octave-fits/octave-fits/work/.tmp/fits.tar.gz'
116-mkdir (/opt/local/var/macports/build/_Users_marius_Development_MacPorts_ports_math_octave-fits/octave-fits/work/.tmp/oct-oKUGH6)
117-untar (/opt/local/var/macports/build/_Users_marius_Development_MacPorts_ports_math_octave-fits/octave-fits/work/.tmp/fits.tar.gz, /opt/local/var/macports/build/_Users_marius_Development_MacPorts_ports_math_octave-fits/octave-fits/work/.tmp/oct-oKUGH6)
118+DEBUG: Assembled command: 'cd "/opt/local/var/macports/build/_Users_marius_Development_MacPorts_ports_math_octave-fits/octave-fits/work/fits" && /opt/local/bin/octave  -q -f --eval 'pkg build -verbose -nodeps /opt/local/var/macports/build/_Users_marius_Development_MacPorts_ports_math_octave-fits/octave-fits/work/fits /opt/local/var/macports/build/_Users_marius_Development_MacPorts_ports_math_octave-fits/octave-fits/work/.tmp/fits.tar.gz''
119+DEBUG: Executing command line:  cd "/opt/local/var/macports/build/_Users_marius_Development_MacPorts_ports_math_octave-fits/octave-fits/work/fits" && /opt/local/bin/octave  -q -f --eval 'pkg build -verbose -nodeps /opt/local/var/macports/build/_Users_marius_Development_MacPorts_ports_math_octave-fits/octave-fits/work/fits /opt/local/var/macports/build/_Users_marius_Development_MacPorts_ports_math_octave-fits/octave-fits/work/.tmp/fits.tar.gz'
120+mkdir (/opt/local/var/macports/build/_Users_marius_Development_MacPorts_ports_math_octave-fits/octave-fits/work/.tmp/oct-UUV1al)
121+untar (/opt/local/var/macports/build/_Users_marius_Development_MacPorts_ports_math_octave-fits/octave-fits/work/.tmp/fits.tar.gz, /opt/local/var/macports/build/_Users_marius_Development_MacPorts_ports_math_octave-fits/octave-fits/work/.tmp/oct-UUV1al)
122 mkoctfile --verbose -Wall -L/opt/local/lib -lcfitsio  read_fits_image.cc
123-/usr/bin/clang++ -c -I/opt/local/include -fPIC -I/opt/local/include/octave-3.8.2/octave/.. -I/opt/local/include/octave-3.8.2/octave -I/opt/local/include  -pipe -Os -arch x86_64 -stdlib=libc++  -Wall   read_fits_image.cc -o read_fits_image.o
124+/usr/bin/clang++ -c  -fPIC -I/opt/local/include/octave-3.8.2/octave/.. -I/opt/local/include/octave-3.8.2/octave -I/opt/local/include  -pipe -Os -arch x86_64 -stdlib=libc++ -D_THREAD_SAFE -pthread  -Wall   read_fits_image.cc -o read_fits_image.o
125 /usr/bin/clang++ -bundle -bundle_loader /opt/local/bin/octave-3.8.2  -Wall -o read_fits_image.oct  read_fits_image.o   -L/opt/local/lib -lcfitsio -L/opt/local/lib/octave/3.8.2 -L/opt/local/lib -loctinterp -loctave   
126 mkoctfile --verbose -Wall -L/opt/local/lib -lcfitsio  save_fits_image.cc
127-/usr/bin/clang++ -c -I/opt/local/include -fPIC -I/opt/local/include/octave-3.8.2/octave/.. -I/opt/local/include/octave-3.8.2/octave -I/opt/local/include  -pipe -Os -arch x86_64 -stdlib=libc++  -Wall   save_fits_image.cc -o save_fits_image.o
128+/usr/bin/clang++ -c  -fPIC -I/opt/local/include/octave-3.8.2/octave/.. -I/opt/local/include/octave-3.8.2/octave -I/opt/local/include  -pipe -Os -arch x86_64 -stdlib=libc++ -D_THREAD_SAFE -pthread  -Wall   save_fits_image.cc -o save_fits_image.o
129 /usr/bin/clang++ -bundle -bundle_loader /opt/local/bin/octave-3.8.2  -Wall -o save_fits_image.oct  save_fits_image.o   -L/opt/local/lib -lcfitsio -L/opt/local/lib/octave/3.8.2 -L/opt/local/lib -loctinterp -loctave   
130 mkoctfile --verbose -Wall -L/opt/local/lib -lcfitsio  save_fits_image_multi_ext.cc
131-/usr/bin/clang++ -c -I/opt/local/include -fPIC -I/opt/local/include/octave-3.8.2/octave/.. -I/opt/local/include/octave-3.8.2/octave -I/opt/local/include  -pipe -Os -arch x86_64 -stdlib=libc++  -Wall   save_fits_image_multi_ext.cc -o save_fits_image_multi_ext.o
132+/usr/bin/clang++ -c  -fPIC -I/opt/local/include/octave-3.8.2/octave/.. -I/opt/local/include/octave-3.8.2/octave -I/opt/local/include  -pipe -Os -arch x86_64 -stdlib=libc++ -D_THREAD_SAFE -pthread  -Wall   save_fits_image_multi_ext.cc -o save_fits_image_multi_ext.o
133 /usr/bin/clang++ -bundle -bundle_loader /opt/local/bin/octave-3.8.2  -Wall -o save_fits_image_multi_ext.oct  save_fits_image_multi_ext.o   -L/opt/local/lib -lcfitsio -L/opt/local/lib/octave/3.8.2 -L/opt/local/lib -loctinterp -loctave   
134-copyfile /opt/local/var/macports/build/_Users_marius_Development_MacPorts_ports_math_octave-fits/octave-fits/work/.tmp/oct-oKUGH6/fits/src/read_fits_image.oct /opt/local/var/macports/build/_Users_marius_Development_MacPorts_ports_math_octave-fits/octave-fits/work/.tmp/oct-oKUGH6/fits/src/save_fits_image.oct /opt/local/var/macports/build/_Users_marius_Development_MacPorts_ports_math_octave-fits/octave-fits/work/.tmp/oct-oKUGH6/fits/src/save_fits_image_multi_ext.oct /opt/local/var/macports/build/_Users_marius_Development_MacPorts_ports_math_octave-fits/octave-fits/work/.tmp/oct-oKUGH6/fits/inst/x86_64-apple-darwin13.4.0-api-v49+
135-/opt/local/var/macports/build/_Users_marius_Development_MacPorts_ports_math_octave-fits/octave-fits/work/.tmp/octave-help-r71Cmp:105: expected @end ifinfo
136-/opt/local/var/macports/build/_Users_marius_Development_MacPorts_ports_math_octave-fits/octave-fits/work/.tmp/octave-help-jOhK0p:102: superfluous argument to @end ifinfo:      Copyright (c) 2009-2014, Dirk Schmidt <fs@@dirk-schmidt.net>      (possibly involving @seealso)
137-/opt/local/var/macports/build/_Users_marius_Development_MacPorts_ports_math_octave-fits/octave-fits/work/.tmp/octave-help-1BH90L:105: expected @end ifinfo
138-/opt/local/var/macports/build/_Users_marius_Development_MacPorts_ports_math_octave-fits/octave-fits/work/.tmp/octave-help-71sblt:102: superfluous argument to @end ifinfo:      Copyright (c) 2009-2014, Dirk Schmidt <fs@@dirk-schmidt.net>      (possibly involving @seealso)
139+copyfile /opt/local/var/macports/build/_Users_marius_Development_MacPorts_ports_math_octave-fits/octave-fits/work/.tmp/oct-UUV1al/fits/src/read_fits_image.oct /opt/local/var/macports/build/_Users_marius_Development_MacPorts_ports_math_octave-fits/octave-fits/work/.tmp/oct-UUV1al/fits/src/save_fits_image.oct /opt/local/var/macports/build/_Users_marius_Development_MacPorts_ports_math_octave-fits/octave-fits/work/.tmp/oct-UUV1al/fits/src/save_fits_image_multi_ext.oct /opt/local/var/macports/build/_Users_marius_Development_MacPorts_ports_math_octave-fits/octave-fits/work/.tmp/oct-UUV1al/fits/inst/x86_64-apple-darwin13.4.0-api-v49+
140+/opt/local/var/macports/build/_Users_marius_Development_MacPorts_ports_math_octave-fits/octave-fits/work/.tmp/octave-help-LxTlbF:105: expected @end ifinfo
141+/opt/local/var/macports/build/_Users_marius_Development_MacPorts_ports_math_octave-fits/octave-fits/work/.tmp/octave-help-rHAMuJ:102: superfluous argument to @end ifinfo:      Copyright (c) 2009-2014, Dirk Schmidt <fs@@dirk-schmidt.net>      (possibly involving @seealso)
142+/opt/local/var/macports/build/_Users_marius_Development_MacPorts_ports_math_octave-fits/octave-fits/work/.tmp/octave-help-GGpo2a:105: expected @end ifinfo
143+/opt/local/var/macports/build/_Users_marius_Development_MacPorts_ports_math_octave-fits/octave-fits/work/.tmp/octave-help-Ead11T:102: superfluous argument to @end ifinfo:      Copyright (c) 2009-2014, Dirk Schmidt <fs@@dirk-schmidt.net>      (possibly involving @seealso)
144 For information about changes from previous versions of the fits package, run 'news fits'.
145 a fits
146 a fits/COPYING
147@@ -2327,11 +2316,7 @@
148 a fits/inst/x86_64-apple-darwin13.4.0-api-v49+/save_fits_image.oct
149 a fits/inst/x86_64-apple-darwin13.4.0-api-v49+/save_fits_image_multi_ext.oct
150 DEBUG: Privilege de-escalation not attempted as not running as root.
151-DEBUG: build phase started at Thu Jan 22 12:12:06 CST 2015
152---->  Building octave-fits
153-DEBUG: Executing org.macports.build (octave-fits)
154-DEBUG: Privilege de-escalation not attempted as not running as root.
155-DEBUG: destroot phase started at Thu Jan 22 12:12:06 CST 2015
156+DEBUG: destroot phase started at Thu Jan 22 12:14:47 CST 2015
157 --->  Staging octave-fits into destroot
158 DEBUG: Can't run destroot under sudo without elevated privileges (due to mtree).
159 DEBUG: Run destroot without sudo to avoid root privileges.
160@@ -2480,7 +2465,7 @@
161 DEBUG: changing euid/egid - current euid: 0 - current egid: 0
162 DEBUG: egid changed to: 501
163 DEBUG: euid changed to: 503
164-DEBUG: install phase started at Thu Jan 22 12:12:06 CST 2015
165+DEBUG: install phase started at Thu Jan 22 12:14:50 CST 2015
166 --->  Installing octave-fits @1.0.5_0
167 DEBUG: Can't run install on this port without elevated privileges. Escalating privileges back to root.
168 DEBUG: euid changed to: 0. egid changed to: 0.
169@@ -2522,7 +2507,7 @@
170 DEBUG: removing file: /opt/local/var/macports/build/_Users_marius_Development_MacPorts_ports_math_octave-fits/octave-fits/work/destroot/+DESC
171 DEBUG: removing file: /opt/local/var/macports/build/_Users_marius_Development_MacPorts_ports_math_octave-fits/octave-fits/work/destroot/+PORTFILE
172 DEBUG: removing file: /opt/local/var/macports/build/_Users_marius_Development_MacPorts_ports_math_octave-fits/octave-fits/work/destroot/+STATE
173-DEBUG: activate phase started at Thu Jan 22 12:12:06 CST 2015
174+DEBUG: activate phase started at Thu Jan 22 12:14:51 CST 2015
175 DEBUG: Executing org.macports.activate (octave-fits)
176 --->  Activating octave-fits @1.0.5_0
177 DEBUG: Using /usr/bin/tar
178@@ -2558,12 +2543,12 @@
179 DEBUG: activating directory: /opt/local/share/octave/packages
180 DEBUG: activating file: /opt/local/share/octave/packages/.turd_octave-fits
181 DEBUG: Executing proc-post-org.macports.activate-activate-0
182-mkdir (/var/tmp/oct-rfnZEp)
183-untar (/opt/local/share/octave/fits.tar.gz, /var/tmp/oct-rfnZEp)
184+mkdir (/var/tmp/oct-ML4OPK)
185+untar (/opt/local/share/octave/fits.tar.gz, /var/tmp/oct-ML4OPK)
186 For information about changes from previous versions of the fits package, run 'news fits'.
187 DEBUG: Executing portactivate::activate_finish
188 DEBUG: Executing org.macports.main (octave-fits)
189-DEBUG: clean phase started at Thu Jan 22 12:12:07 CST 2015
190+DEBUG: clean phase started at Thu Jan 22 12:14:54 CST 2015
191 --->  Cleaning octave-fits
192 DEBUG: Executing org.macports.clean (octave-fits)
193 --->  Removing work directory for octave-fits