Ticket #51090: configure.log

File configure.log, 3.6 KB (added by aeronova, 8 years ago)
Line 
1================================================================================
2Starting Configure Run at Fri Apr  8 06:59:00 2016
3Configure Options: --prefix=/opt/local --prefix=/opt/local/lib/slepc --with-arpack-dir=/opt/local --with-arpack-flags=-lparpack,-larpack
4Working directory: /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_slepc/slepc/work/v3.6.2
5Python version:
62.7.10 (default, Oct 23 2015, 19:19:21)
7[GCC 4.2.1 Compatible Apple LLVM 7.0.0 (clang-700.0.59.5)]
8make: /opt/local/bin/gmake
9PETSc source directory: /opt/local/lib/petsc
10PETSc install directory: /opt/local/lib/petsc
11PETSc version: 3.6.3
12SLEPc source directory: /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_slepc/slepc/work/v3.6.2
13SLEPc install directory: /opt/local/lib/slepc
14SLEPc version: 3.6.2
15================================================================================
16Checking PETSc installation...
17#include "petscksp.h"
18int main() {
19Vec v; Mat m; KSP k;
20PetscInitializeNoArguments();
21VecCreate(PETSC_COMM_WORLD,&v);
22MatCreate(PETSC_COMM_WORLD,&m);
23KSPCreate(PETSC_COMM_WORLD,&k);
24return 0;
25}
26/opt/local/bin/mpicc-mpich-mp -o checklink.o -c -Os -arch x86_64 -fPIC -Os -I/opt/local/include -pipe -Os -arch x86_64 -I/opt/local/lib/petsc/include -I/opt/local/lib/petsc/include -I/opt/local/include -I/opt/local/include/mpich-mp  -I/opt/local/include -I/opt/local/include `pwd`/checklink.c
27/opt/local/bin/mpicc-mpich-mp -L/opt/local/lib -Wl,-headerpad_max_install_names -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Os -arch x86_64 -fPIC -Os -pipe -Os -arch x86_64 -o checklink checklink.o  -Wl,-rpath,/opt/local/lib/petsc/lib -L/opt/local/lib/petsc/lib  -lpetsc -Wl,-rpath,/opt/local/lib -L/opt/local/lib -lHYPRE -lml -lcmumps -ldmumps -lsmumps -lzmumps -lmumps_common -lpord -lscalapack -lumfpack -lklu -lcholmod -lbtf -lccolamd -lcolamd -lcamd -lamd -lsuitesparseconfig -lsundials_cvode -lsundials_nvecserial -lsundials_nvecparallel /System/Library/Frameworks/Accelerate.framework/Versions/Current/Accelerate -lparmetis -lmetis -lnetcdf -lhdf5_hl -lhdf5 -lhwloc -llcg -lssl -lcrypto -lyaml -ldl -Wl,-rpath,/opt/local/lib/mpich-mp -L/opt/local/lib/mpich-mp -lmpifort -lmpi -lpmpi -lgfortran -Wl,-rpath,/opt/local/lib/gcc5/gcc/x86_64-apple-darwin15/5.3.0 -L/opt/local/lib/gcc5/gcc/x86_64-apple-darwin15/5.3.0 -Wl,-rpath,/opt/local/lib/gcc5 -L/opt/local/lib/gcc5 -lgfortran -lSystem -lgcc_ext.10.5 -lquadmath -lm  -ldl
28ld: warning: could not create compact unwind for ___cmumps_parallel_analysis_MOD_cmumps_ana_f_par: stack subq instruction is too different from dwarf stack size
29ld: warning: could not create compact unwind for ___dmumps_parallel_analysis_MOD_dmumps_ana_f_par: stack subq instruction is too different from dwarf stack size
30ld: warning: could not create compact unwind for ___smumps_parallel_analysis_MOD_smumps_ana_f_par: stack subq instruction is too different from dwarf stack size
31ld: warning: could not create compact unwind for ___zmumps_parallel_analysis_MOD_zmumps_ana_f_par: stack subq instruction is too different from dwarf stack size
32Undefined symbols for architecture x86_64:
33  "_get_rn_dbl_simple_mpi", referenced from:
34      import-atom in libpetsc.dylib
35  "_init_rng_simple_mpi", referenced from:
36      import-atom in libpetsc.dylib
37ld: symbol(s) not found for architecture x86_64
38clang: error: linker command failed with exit code 1 (use -v to see invocation)
39makefile:2: recipe for target 'checklink' failed
40gmake: *** [checklink] Error 1
41
42ERROR: Unable to link with PETSc