Ticket #51841: mathgl-main.log

File mathgl-main.log, 13.1 KB (added by mojca (Mojca Miklavec), 8 years ago)
Line 
1version:1
2:msg:clean --->  Computing dependencies for mathgl:info:clean .:debug:clean mathgl has no conflicts
3:debug:clean Searching for dependency: cmake
4:debug:clean Found Dependency: receipt exists for cmake
5:debug:clean Searching for dependency: fltk
6:debug:clean Found Dependency: receipt exists for fltk
7:debug:clean Searching for dependency: giflib
8:debug:clean Found Dependency: receipt exists for giflib
9:debug:clean Searching for dependency: gsl
10:debug:clean Found Dependency: receipt exists for gsl
11:debug:clean Searching for dependency: guile
12:debug:clean Found Dependency: receipt exists for guile
13:debug:clean Searching for dependency: hdf5
14:debug:clean Found Dependency: receipt exists for hdf5
15:debug:clean Searching for dependency: python27
16:debug:clean Found Dependency: receipt exists for python27
17:debug:clean Searching for dependency: ruby22
18:debug:clean Found Dependency: receipt exists for ruby22
19:debug:main Executing org.macports.main (mathgl)
20:debug:main dropping privileges: euid changed to 502, egid changed to 501.
21:debug:archivefetch archivefetch phase started at Wed Jul 13 14:28:14 CEST 2016
22:debug:archivefetch Executing org.macports.archivefetch (mathgl)
23:debug:archivefetch Privilege de-escalation not attempted as not running as root.
24:debug:fetch fetch phase started at Wed Jul 13 14:28:14 CEST 2016
25:notice:fetch --->  Fetching distfiles for mathgl
26:debug:fetch Executing org.macports.fetch (mathgl)
27:info:fetch --->  mathgl-2.3.5.1.tar.gz does not exist in /opt/local/var/macports/distfiles/mathgl
28:notice:fetch --->  Attempting to fetch mathgl-2.3.5.1.tar.gz from http://fco.it.distfiles.macports.org/mirrors/macports-distfiles/mathgl
29:debug:fetch Privilege de-escalation not attempted as not running as root.
30:debug:checksum checksum phase started at Wed Jul 13 14:28:20 CEST 2016
31:notice:checksum --->  Verifying checksums for mathgl
32:debug:checksum Executing org.macports.checksum (mathgl)
33:info:checksum --->  Checksumming mathgl-2.3.5.1.tar.gz
34:debug:checksum Calculated (rmd160) is d0cfad3fff8c11870b388997fe0735c653e29eb5
35:debug:checksum Correct (rmd160) checksum for mathgl-2.3.5.1.tar.gz
36:debug:checksum Calculated (sha256) is 77a56936f5a763fc03480c9c1fe8ed528a949b3d63b858c91abc21c731acf0db
37:debug:checksum Correct (sha256) checksum for mathgl-2.3.5.1.tar.gz
38:debug:checksum Privilege de-escalation not attempted as not running as root.
39:debug:extract extract phase started at Wed Jul 13 14:28:21 CEST 2016
40:notice:extract --->  Extracting mathgl
41:debug:extract Executing org.macports.extract (mathgl)
42:info:extract --->  Extracting mathgl-2.3.5.1.tar.gz
43:debug:extract setting option extract.args to '/opt/local/var/macports/distfiles/mathgl/mathgl-2.3.5.1.tar.gz'
44:debug:extract Environment:
45:debug:extract CC_PRINT_OPTIONS='YES'
46:debug:extract CC_PRINT_OPTIONS_FILE='/path/to/mathgl/work/.CC_PRINT_OPTIONS'
47:debug:extract CPATH='/opt/local/include'
48:debug:extract LIBRARY_PATH='/opt/local/lib'
49:debug:extract MACOSX_DEPLOYMENT_TARGET='10.7'
50:info:extract Executing:  cd "/path/to/mathgl/work" && /usr/bin/gzip -dc '/opt/local/var/macports/distfiles/mathgl/mathgl-2.3.5.1.tar.gz' | /usr/bin/gnutar --no-same-owner -xf -
51:debug:extract system:  cd "/path/to/mathgl/work" && /usr/bin/gzip -dc '/opt/local/var/macports/distfiles/mathgl/mathgl-2.3.5.1.tar.gz' | /usr/bin/gnutar --no-same-owner -xf -
52:debug:extract euid/egid changed to: 0/0
53:debug:extract chowned /path/to/mathgl/work to macports
54:debug:extract euid/egid changed to: 502/501
55:debug:extract Privilege de-escalation not attempted as not running as root.
56:debug:patch patch phase started at Wed Jul 13 14:28:22 CEST 2016
57:debug:patch Executing org.macports.patch (mathgl)
58:notice:patch --->  Applying patches to mathgl
59:info:patch --->  Applying patch-CMakeLists.txt.diff
60:debug:patch Environment:
61:debug:patch CC_PRINT_OPTIONS='YES'
62:debug:patch CC_PRINT_OPTIONS_FILE='/path/to/mathgl/work/.CC_PRINT_OPTIONS'
63:debug:patch CPATH='/opt/local/include'
64:debug:patch LIBRARY_PATH='/opt/local/lib'
65:debug:patch MACOSX_DEPLOYMENT_TARGET='10.7'
66:info:patch Executing:  cd "/path/to/mathgl/work/mathgl-2.3.5.1" && /usr/bin/patch -p0 < '/path/to/macports/trunk/dports/math/mathgl/files/patch-CMakeLists.txt.diff'
67:debug:patch system:  cd "/path/to/mathgl/work/mathgl-2.3.5.1" && /usr/bin/patch -p0 < '/path/to/macports/trunk/dports/math/mathgl/files/patch-CMakeLists.txt.diff'
68:info:patch patching file CMakeLists.txt
69:info:patch Hunk #1 succeeded at 637 (offset 18 lines).
70:debug:patch Privilege de-escalation not attempted as not running as root.
71:debug:configure configure phase started at Wed Jul 13 14:28:23 CEST 2016
72:notice:configure --->  Configuring mathgl
73:debug:configure Preferred compilers: clang llvm-gcc-4.2 macports-clang-3.4 macports-clang-3.3 macports-llvm-gcc-4.2 apple-gcc-4.2
74:debug:configure Using compiler 'Xcode Clang'
75:debug:configure Executing proc-pre-org.macports.configure-configure-0
76:debug:configure Executing proc-pre-org.macports.configure-configure-1
77:debug:configure Executing proc-pre-org.macports.configure-configure-2
78:debug:configure Executing org.macports.configure (mathgl)
79:debug:configure Environment:
80:debug:configure CC='/usr/bin/clang'
81:debug:configure CC_PRINT_OPTIONS='YES'
82:debug:configure CC_PRINT_OPTIONS_FILE='/path/to/mathgl/work/.CC_PRINT_OPTIONS'
83:debug:configure CFLAGS='-pipe -Os -DH5_USE_18_API'
84:debug:configure CPATH='/opt/local/include'
85:debug:configure CPPFLAGS='-I/opt/local/include'
86:debug:configure CXX='/usr/bin/clang++'
87:debug:configure CXXFLAGS='-pipe -Os -stdlib=libstdc++'
88:debug:configure F77FLAGS='-m64'
89:debug:configure F90FLAGS='-pipe -Os -m64'
90:debug:configure FCFLAGS='-pipe -Os -m64'
91:debug:configure FFLAGS='-pipe -Os'
92:debug:configure INSTALL='/usr/bin/install -c'
93:debug:configure LDFLAGS='-L/opt/local/lib -Wl,-headerpad_max_install_names'
94:debug:configure LIBRARY_PATH='/opt/local/lib'
95:debug:configure MACOSX_DEPLOYMENT_TARGET='10.7'
96:debug:configure OBJC='/usr/bin/clang'
97:debug:configure OBJCFLAGS='-pipe -Os'
98:debug:configure OBJCXX='/usr/bin/clang++'
99:debug:configure OBJCXXFLAGS='-pipe -Os -stdlib=libstdc++'
100:info:configure Executing:  cd "/path/to/mathgl/work/mathgl-2.3.5.1" && /opt/local/bin/cmake -DCMAKE_INSTALL_PREFIX=/opt/local -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_COLOR_MAKEFILE=ON -DCMAKE_BUILD_TYPE=Release -DCMAKE_BUILD_WITH_INSTALL_RPATH=ON -DCMAKE_INSTALL_RPATH=/opt/local/lib -DCMAKE_INSTALL_NAME_DIR=/opt/local/lib -DCMAKE_SYSTEM_PREFIX_PATH="/opt/local;/usr" -DCMAKE_MODULE_PATH=/opt/local/share/cmake/Modules -DCMAKE_FIND_FRAMEWORK=LAST -Wno-dev -Denable-gsl=ON -Denable-hdf5=ON -Denable-openmp=OFF -DCMAKE_C_FLAGS_RELEASE="-DNDEBUG" -DCMAKE_CXX_FLAGS_RELEASE="-DNDEBUG" -DCMAKE_OSX_ARCHITECTURES="x86_64" -DCMAKE_OSX_DEPLOYMENT_TARGET="10.7" -DCMAKE_OSX_SYSROOT="/" /path/to/mathgl/work/mathgl-2.3.5.1
101:debug:configure system:  cd "/path/to/mathgl/work/mathgl-2.3.5.1" && /opt/local/bin/cmake -DCMAKE_INSTALL_PREFIX=/opt/local -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_COLOR_MAKEFILE=ON -DCMAKE_BUILD_TYPE=Release -DCMAKE_BUILD_WITH_INSTALL_RPATH=ON -DCMAKE_INSTALL_RPATH=/opt/local/lib -DCMAKE_INSTALL_NAME_DIR=/opt/local/lib -DCMAKE_SYSTEM_PREFIX_PATH="/opt/local;/usr" -DCMAKE_MODULE_PATH=/opt/local/share/cmake/Modules -DCMAKE_FIND_FRAMEWORK=LAST -Wno-dev -Denable-gsl=ON -Denable-hdf5=ON -Denable-openmp=OFF -DCMAKE_C_FLAGS_RELEASE="-DNDEBUG" -DCMAKE_CXX_FLAGS_RELEASE="-DNDEBUG" -DCMAKE_OSX_ARCHITECTURES="x86_64" -DCMAKE_OSX_DEPLOYMENT_TARGET="10.7" -DCMAKE_OSX_SYSROOT="/" /path/to/mathgl/work/mathgl-2.3.5.1
102:info:configure -- The C compiler identification is AppleClang 4.2.0.4250028
103:info:configure -- The CXX compiler identification is AppleClang 4.2.0.4250028
104:info:configure -- Check for working C compiler: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/clang
105:info:configure -- Check for working C compiler: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/clang -- works
106:info:configure -- Detecting C compiler ABI info
107:info:configure -- Detecting C compiler ABI info - done
108:info:configure -- Detecting C compile features
109:info:configure -- Detecting C compile features - done
110:info:configure -- Check for working CXX compiler: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/clang++
111:info:configure -- Check for working CXX compiler: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/clang++ -- works
112:info:configure -- Detecting CXX compiler ABI info
113:info:configure -- Detecting CXX compiler ABI info - done
114:info:configure -- Detecting CXX compile features
115:info:configure -- Detecting CXX compile features - done
116:info:configure -- Check if the system is big endian
117:info:configure -- Searching 16 bit integer
118:info:configure -- Looking for sys/types.h
119:info:configure -- Looking for sys/types.h - found
120:info:configure -- Looking for stdint.h
121:info:configure -- Looking for stdint.h - found
122:info:configure -- Looking for stddef.h
123:info:configure -- Looking for stddef.h - found
124:info:configure -- Check size of unsigned short
125:info:configure -- Check size of unsigned short - done
126:info:configure -- Using unsigned short
127:info:configure -- Check if the system is big endian - little endian
128:info:configure -- Looking for sin
129:info:configure -- Looking for sin - found
130:info:configure -- Looking for memrchr
131:info:configure -- Looking for memrchr - not found
132:info:configure -- Check size of long
133:info:configure -- Check size of long - done
134:info:configure -- Performing Test MGL_HAVE_C99_COMPLEX
135:info:configure -- Performing Test MGL_HAVE_C99_COMPLEX - Success
136:info:configure -- Performing Test MGL_HAVE_NAN_INF
137:info:configure -- Performing Test MGL_HAVE_NAN_INF - Success
138:info:configure -- Performing Test MGL_HAVE_ATTRIBUTE
139:info:configure -- Performing Test MGL_HAVE_ATTRIBUTE - Success
140:info:configure -- Performing Test MGL_HAVE_TYPEOF
141:info:configure -- Performing Test MGL_HAVE_TYPEOF - Success
142:info:configure -- Performing Test MGL_HAVE_GETOPT
143:info:configure -- Performing Test MGL_HAVE_GETOPT - Success
144:info:configure -- Looking for pthread.h
145:info:configure -- Looking for pthread.h - found
146:info:configure -- Looking for pthread_create
147:info:configure -- Looking for pthread_create - found
148:info:configure -- Found Threads: TRUE 
149:info:configure -- Performing Test MGL_HAVE_GSL2
150:info:configure -- Performing Test MGL_HAVE_GSL2 - Success
151:info:configure -- HDF5: Using hdf5 compiler wrapper to determine C configuration
152:info:configure -- HDF5: Using hdf5 compiler wrapper to determine CXX configuration
153:info:configure -- Could NOT find HDF5 (missing:  HDF5_HL_LIBRARIES) (found version "1.10.0")
154:info:configure CMake Warning at CMakeLists.txt:408 (find_package):
155:info:configure   Could not find a package configuration file provided by "HDF5" with any of
156:info:configure   the following names:
157:info:configure     hdf5Config.cmake
158:info:configure     hdf5-config.cmake
159:info:configure   Add the installation prefix of "HDF5" to CMAKE_PREFIX_PATH or set
160:info:configure   "HDF5_DIR" to a directory containing one of the above files.  If "HDF5"
161:info:configure   provides a separate development package or SDK, be sure it has been
162:info:configure   installed.
163:info:configure CMake Error at CMakeLists.txt:410 (message):
164:info:configure   Couldn't find HDF5 library.
165:info:configure -- Found ZLIB: /opt/local/lib/libz.dylib (found version "1.2.8")
166:info:configure -- Found PNG: /opt/local/lib/libpng.dylib (found version "1.6.23")
167:info:configure -- Found OpenGL: //System/Library/Frameworks/OpenGL.framework 
168:info:configure -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY
169:info:configure -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success
170:info:configure -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY
171:info:configure -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success
172:info:configure -- Performing Test COMPILER_HAS_DEPRECATED_ATTR
173:info:configure -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success
174:info:configure -- Configuring incomplete, errors occurred!
175:info:configure See also "/path/to/mathgl/work/mathgl-2.3.5.1/CMakeFiles/CMakeOutput.log".
176:info:configure See also "/path/to/mathgl/work/mathgl-2.3.5.1/CMakeFiles/CMakeError.log".
177:info:configure Command failed:  cd "/path/to/mathgl/work/mathgl-2.3.5.1" && /opt/local/bin/cmake -DCMAKE_INSTALL_PREFIX=/opt/local -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_COLOR_MAKEFILE=ON -DCMAKE_BUILD_TYPE=Release -DCMAKE_BUILD_WITH_INSTALL_RPATH=ON -DCMAKE_INSTALL_RPATH=/opt/local/lib -DCMAKE_INSTALL_NAME_DIR=/opt/local/lib -DCMAKE_SYSTEM_PREFIX_PATH="/opt/local;/usr" -DCMAKE_MODULE_PATH=/opt/local/share/cmake/Modules -DCMAKE_FIND_FRAMEWORK=LAST -Wno-dev -Denable-gsl=ON -Denable-hdf5=ON -Denable-openmp=OFF -DCMAKE_C_FLAGS_RELEASE="-DNDEBUG" -DCMAKE_CXX_FLAGS_RELEASE="-DNDEBUG" -DCMAKE_OSX_ARCHITECTURES="x86_64" -DCMAKE_OSX_DEPLOYMENT_TARGET="10.7" -DCMAKE_OSX_SYSROOT="/" /path/to/mathgl/work/mathgl-2.3.5.1
178:info:configure Exit code: 1
179:error:configure Failed to configure mathgl: configure failure: command execution failed
180:debug:configure Error code: NONE
181:debug:configure Backtrace: configure failure: command execution failed
182:debug:configure     while executing
183:debug:configure "$procedure $targetname"
184:error:configure See /opt/local/var/macports/logs/[...]/mathgl/main.log for details.