Ticket #55080: cdo.log.2017-09-05_19.16.36

File cdo.log.2017-09-05_19.16.36, 218.2 KB (added by majoc-at-astro (majoc-at-astro), 7 years ago)

main.log from cdo +openmpi

Line 
1version:1
2:debug:main epoch: in tree: 3 installed: 3
3:debug:main netcdf 4.4.1.1_0 exists in the ports tree
4:debug:main netcdf 4.4.1.1_0 +dap+netcdf4+openmpi is the latest installed
5:debug:main netcdf 4.4.1.1_0 +dap+netcdf4+openmpi is active
6:debug:main Merging existing variants '+dap+netcdf4+openmpi' into variants
7:debug:main new fully merged portvariants: openmpi + netcdf4 + dap +
8:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/science/netcdf
9:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
10:debug:main Sourcing PortGroup active_variants 1.1 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/active_variants-1.1.tcl
11:debug:main Sourcing PortGroup compilers 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compilers-1.0.tcl
12:debug:main Sourcing PortGroup mpi 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/mpi-1.0.tcl
13:debug:main Sourcing PortGroup github 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/github-1.0.tcl
14:debug:main Re-registering default for configure.dir
15:debug:main Re-registering default for configure.pre_args
16:debug:main Re-registering default for build.dir
17:debug:main Re-registering default for destroot.target
18:debug:main Sourcing PortGroup cmake 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/cmake-1.0.tcl
19:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
20:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
21:debug:main universal variant already exists, so not adding the default one
22:debug:main Executing variant openmpi provides openmpi
23:debug:main Executing variant netcdf4 provides netcdf4
24:debug:main Executing variant dap provides dap
25:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
26:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
27:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
28:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
29:debug:main No need to upgrade! netcdf 4.4.1.1_0 >= netcdf 4.4.1.1_0
30:debug:main epoch: in tree: 0 installed: 0
31:debug:main openmpi-default 1.10.3_0 exists in the ports tree
32:debug:main openmpi-default 1.10.3_0 +gcc6 is the latest installed
33:debug:main openmpi-default 1.10.3_0 +gcc6 is active
34:debug:main Merging existing variants '+gcc6' into variants
35:debug:main new fully merged portvariants: gcc6 +
36:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/science/openmpi
37:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
38:debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl
39:debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
40:debug:main Sourcing PortGroup active_variants 1.1 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/active_variants-1.1.tcl
41:debug:main Sourcing PortGroup compilers 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compilers-1.0.tcl
42:debug:main Unmatched blacklisted compiler: gcc-4.0
43:debug:main Unmatched blacklisted compiler: macports-llvm-gcc-4.2
44:debug:main universal_variant is false, so not adding the default universal variant
45:debug:main Executing variant gcc6 provides gcc6
46:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
47:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
48:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
49:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
50:debug:main No need to upgrade! openmpi-default 1.10.3_0 >= openmpi-default 1.10.3_0
51:debug:main epoch: in tree: 1 installed: 1
52:debug:main hwloc 1.11.5_0 exists in the ports tree
53:debug:main hwloc 1.11.5_0  is the latest installed
54:debug:main hwloc 1.11.5_0  is active
55:debug:main Merging existing variants '' into variants
56:debug:main new fully merged portvariants:
57:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/hwloc
58:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
59:debug:main adding the default universal variant
60:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
61:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
62:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
63:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
64:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
65:debug:main No need to upgrade! hwloc 1.11.5_0 >= hwloc 1.11.5_0
66:debug:main epoch: in tree: 2 installed: 2
67:debug:main gcc6 6.4.0_0 exists in the ports tree
68:debug:main gcc6 6.4.0_0  is the latest installed
69:debug:main gcc6 6.4.0_0  is active
70:debug:main Merging existing variants '' into variants
71:debug:main new fully merged portvariants:
72:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/lang/gcc6
73:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
74:debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
75:debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl
76:debug:main compiler llvm-gcc-4.2 blacklisted because it's not installed or it doesn't work
77:debug:main compiler clang 802.0.42 not blacklisted because it doesn't match {clang < 300}
78:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
79:debug:main universal variant already exists, so not adding the default one
80:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
81:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
82:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
83:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
84:debug:main No need to upgrade! gcc6 6.4.0_0 >= gcc6 6.4.0_0
85:debug:main epoch: in tree: 0 installed: 0
86:debug:main cctools 895_4 exists in the ports tree
87:debug:main cctools 895_4 +llvm40 is the latest installed
88:debug:main cctools 895_4 +llvm40 is active
89:debug:main Merging existing variants '+llvm40' into variants
90:debug:main new fully merged portvariants: llvm40 +
91:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/cctools
92:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
93:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
94:debug:main universal variant already exists, so not adding the default one
95:debug:main Executing variant llvm40 provides llvm40
96:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
97:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
98:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
99:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
100:debug:main No need to upgrade! cctools 895_4 >= cctools 895_4
101:debug:main epoch: in tree: 2 installed: 2
102:debug:main llvm-4.0 4.0.1_0 exists in the ports tree
103:debug:main llvm-4.0 4.0.1_0  is the latest installed
104:debug:main llvm-4.0 4.0.1_0  is active
105:debug:main Merging existing variants '' into variants
106:debug:main new fully merged portvariants:
107:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/lang/llvm-4.0
108:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
109:debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
110:debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl
111:debug:main Sourcing PortGroup active_variants 1.1 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/active_variants-1.1.tcl
112:debug:main Re-registering default for configure.dir
113:debug:main Re-registering default for configure.pre_args
114:debug:main Re-registering default for build.dir
115:debug:main Re-registering default for destroot.target
116:debug:main Sourcing PortGroup cmake 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/cmake-1.0.tcl
117:debug:main Re-registering default for configure.dir
118:debug:main Re-registering default for build.dir
119:debug:main compiler clang 802.0.42 not blacklisted because it doesn't match {clang < 602}
120:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
121:debug:main universal variant already exists, so not adding the default one
122:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
123:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
124:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
125:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
126:debug:main No need to upgrade! llvm-4.0 4.0.1_0 >= llvm-4.0 4.0.1_0
127:debug:main epoch: in tree: 20090923 installed: 20090923
128:debug:main libedit 20170329-3.1_0 exists in the ports tree
129:debug:main libedit 20170329-3.1_0  is the latest installed
130:debug:main libedit 20170329-3.1_0  is active
131:debug:main Merging existing variants '' into variants
132:debug:main new fully merged portvariants:
133:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/libedit
134:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
135:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
136:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
137:debug:main universal variant already exists, so not adding the default one
138:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
139:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
140:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
141:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
142:debug:main No need to upgrade! libedit 20170329-3.1_0 >= libedit 20170329-3.1_0
143:debug:main epoch: in tree: 0 installed: 0
144:debug:main ncurses 6.0-20170708_0 exists in the ports tree
145:debug:main ncurses 6.0-20170708_0  is the latest installed
146:debug:main ncurses 6.0-20170708_0  is active
147:debug:main Merging existing variants '' into variants
148:debug:main new fully merged portvariants:
149:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/ncurses
150:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
151:debug:main adding the default universal variant
152:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
153:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
154:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
155:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
156:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
157:debug:main No need to upgrade! ncurses 6.0-20170708_0 >= ncurses 6.0-20170708_0
158:debug:main epoch: in tree: 0 installed: 0
159:debug:main libffi 3.2.1_0 exists in the ports tree
160:debug:main libffi 3.2.1_0  is the latest installed
161:debug:main libffi 3.2.1_0  is active
162:debug:main Merging existing variants '' into variants
163:debug:main new fully merged portvariants:
164:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/libffi
165:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
166:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
167:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
168:debug:main universal variant already exists, so not adding the default one
169:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
170:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
171:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
172:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
173:debug:main No need to upgrade! libffi 3.2.1_0 >= libffi 3.2.1_0
174:debug:main epoch: in tree: 0 installed: 0
175:debug:main xar 1.5.2_2 exists in the ports tree
176:debug:main xar 1.5.2_2  is the latest installed
177:debug:main xar 1.5.2_2  is active
178:debug:main Merging existing variants '' into variants
179:debug:main new fully merged portvariants:
180:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/archivers/xar
181:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
182:debug:main adding the default universal variant
183:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
184:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
185:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
186:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
187:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
188:debug:main No need to upgrade! xar 1.5.2_2 >= xar 1.5.2_2
189:debug:main epoch: in tree: 0 installed: 0
190:debug:main bzip2 1.0.6_0 exists in the ports tree
191:debug:main bzip2 1.0.6_0  is the latest installed
192:debug:main bzip2 1.0.6_0  is active
193:debug:main Merging existing variants '' into variants
194:debug:main new fully merged portvariants:
195:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/archivers/bzip2
196:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
197:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
198:debug:main universal variant already exists, so not adding the default one
199:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
200:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
201:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
202:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
203:debug:main No need to upgrade! bzip2 1.0.6_0 >= bzip2 1.0.6_0
204:debug:main epoch: in tree: 0 installed: 0
205:debug:main libiconv 1.15_0 exists in the ports tree
206:debug:main libiconv 1.15_0  is the latest installed
207:debug:main libiconv 1.15_0  is active
208:debug:main Merging existing variants '' into variants
209:debug:main new fully merged portvariants:
210:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/textproc/libiconv
211:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
212:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
213:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
214:debug:main universal variant already exists, so not adding the default one
215:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
216:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
217:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
218:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
219:debug:main No need to upgrade! libiconv 1.15_0 >= libiconv 1.15_0
220:debug:main epoch: in tree: 0 installed: 0
221:debug:main libxml2 2.9.5_0 exists in the ports tree
222:debug:main libxml2 2.9.5_0  is the latest installed
223:debug:main libxml2 2.9.5_0  is active
224:debug:main Merging existing variants '' into variants
225:debug:main new fully merged portvariants:
226:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/textproc/libxml2
227:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
228:debug:main adding the default universal variant
229:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
230:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
231:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
232:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
233:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
234:debug:main No need to upgrade! libxml2 2.9.5_0 >= libxml2 2.9.5_0
235:debug:main epoch: in tree: 0 installed: 0
236:debug:main xz 5.2.3_0 exists in the ports tree
237:debug:main xz 5.2.3_0  is the latest installed
238:debug:main xz 5.2.3_0  is active
239:debug:main Merging existing variants '' into variants
240:debug:main new fully merged portvariants:
241:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/archivers/xz
242:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
243:debug:main adding the default universal variant
244:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
245:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
246:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
247:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
248:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
249:debug:main No need to upgrade! xz 5.2.3_0 >= xz 5.2.3_0
250:debug:main epoch: in tree: 2 installed: 2
251:debug:main gettext 0.19.8.1_0 exists in the ports tree
252:debug:main gettext 0.19.8.1_0  is the latest installed
253:debug:main gettext 0.19.8.1_0  is active
254:debug:main Merging existing variants '' into variants
255:debug:main new fully merged portvariants:
256:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/gettext
257:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
258:debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl
259:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
260:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
261:debug:main compiler clang 802.0.42 not blacklisted because it doesn't match {clang < 211.10.1}
262:debug:main universal variant already exists, so not adding the default one
263:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
264:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
265:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
266:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
267:debug:main No need to upgrade! gettext 0.19.8.1_0 >= gettext 0.19.8.1_0
268:debug:main epoch: in tree: 0 installed: 0
269:debug:main expat 2.2.4_0 exists in the ports tree
270:debug:main expat 2.2.4_0  is the latest installed
271:debug:main expat 2.2.4_0  is active
272:debug:main Merging existing variants '' into variants
273:debug:main new fully merged portvariants:
274:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/textproc/expat
275:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
276:debug:main adding the default universal variant
277:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
278:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
279:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
280:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
281:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
282:debug:main No need to upgrade! expat 2.2.4_0 >= expat 2.2.4_0
283:debug:main epoch: in tree: 0 installed: 0
284:debug:main zlib 1.2.11_0 exists in the ports tree
285:debug:main zlib 1.2.11_0  is the latest installed
286:debug:main zlib 1.2.11_0  is active
287:debug:main Merging existing variants '' into variants
288:debug:main new fully merged portvariants:
289:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/archivers/zlib
290:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
291:debug:main Sourcing PortGroup xcodeversion 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/xcodeversion-1.0.tcl
292:debug:main adding the default universal variant
293:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
294:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
295:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
296:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
297:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
298:debug:main No need to upgrade! zlib 1.2.11_0 >= zlib 1.2.11_0
299:debug:main epoch: in tree: 1 installed: 1
300:debug:main openssl 1.0.2l_0 exists in the ports tree
301:debug:main openssl 1.0.2l_0  is the latest installed
302:debug:main openssl 1.0.2l_0  is active
303:debug:main Merging existing variants '' into variants
304:debug:main new fully merged portvariants:
305:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/openssl
306:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
307:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
308:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
309:debug:main universal variant already exists, so not adding the default one
310:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
311:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
312:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
313:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
314:debug:main No need to upgrade! openssl 1.0.2l_0 >= openssl 1.0.2l_0
315:debug:main epoch: in tree: 1 installed: 1
316:debug:main libcxx 3.9.1_0 exists in the ports tree
317:debug:main libcxx 3.9.1_0 +universal is the latest installed
318:debug:main libcxx 3.9.1_0 +universal is active
319:debug:main Merging existing variants '+universal' into variants
320:debug:main new fully merged portvariants: universal +
321:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/lang/libcxx
322:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
323:debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl
324:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
325:debug:main universal variant already exists, so not adding the default one
326:debug:main Executing variant universal provides universal
327:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
328:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
329:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
330:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
331:debug:main No need to upgrade! libcxx 3.9.1_0 >= libcxx 3.9.1_0
332:debug:main epoch: in tree: 0 installed: 0
333:debug:main perl5 5.24.2_0 exists in the ports tree
334:debug:main perl5 5.24.2_0 +perl5_24 is the latest installed
335:debug:main perl5 5.24.2_0 +perl5_24 is active
336:debug:main Merging existing variants '+perl5_24' into variants
337:debug:main new fully merged portvariants: perl5_24 +
338:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/lang/perl5
339:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
340:debug:main Re-registering default for configure.universal_args
341:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
342:debug:main universal_variant is false, so not adding the default universal variant
343:debug:main Executing variant perl5_24 provides perl5_24
344:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
345:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
346:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
347:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
348:debug:main No need to upgrade! perl5 5.24.2_0 >= perl5 5.24.2_0
349:debug:main epoch: in tree: 0 installed: 0
350:debug:main perl5.24 5.24.2_0 exists in the ports tree
351:debug:main perl5.24 5.24.2_0  is the latest installed
352:debug:main perl5.24 5.24.2_0  is active
353:debug:main Merging existing variants '' into variants
354:debug:main new fully merged portvariants:
355:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/lang/perl5
356:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
357:debug:main Re-registering default for configure.universal_args
358:debug:main Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl
359:debug:main adding the default universal variant
360:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
361:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
362:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
363:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
364:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
365:debug:main No need to upgrade! perl5.24 5.24.2_0 >= perl5.24 5.24.2_0
366:debug:main epoch: in tree: 0 installed: 0
367:debug:main gdbm 1.13_3 exists in the ports tree
368:debug:main gdbm 1.13_3  is the latest installed
369:debug:main gdbm 1.13_3  is active
370:debug:main Merging existing variants '' into variants
371:debug:main new fully merged portvariants:
372:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/databases/gdbm
373:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
374:debug:main adding the default universal variant
375:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
376:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
377:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
378:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
379:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
380:debug:main No need to upgrade! gdbm 1.13_3 >= gdbm 1.13_3
381:debug:main epoch: in tree: 0 installed: 0
382:debug:main readline 7.0.003_1 exists in the ports tree
383:debug:main readline 7.0.003_1  is the latest installed
384:debug:main readline 7.0.003_1  is active
385:debug:main Merging existing variants '' into variants
386:debug:main new fully merged portvariants:
387:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/readline
388:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
389:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
390:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
391:debug:main universal variant already exists, so not adding the default one
392:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
393:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
394:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
395:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
396:debug:main No need to upgrade! readline 7.0.003_1 >= readline 7.0.003_1
397:debug:main epoch: in tree: 0 installed: 0
398:debug:main llvm_select 2_0 exists in the ports tree
399:debug:main llvm_select 2_0  is the latest installed
400:debug:main llvm_select 2_0  is active
401:debug:main Merging existing variants '' into variants
402:debug:main new fully merged portvariants:
403:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/sysutils/llvm_select
404:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
405:debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
406:debug:main universal_variant is false, so not adding the default universal variant
407:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
408:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
409:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
410:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
411:debug:main No need to upgrade! llvm_select 2_0 >= llvm_select 2_0
412:debug:main epoch: in tree: 0 installed: 0
413:debug:main gmp 6.1.2_1 exists in the ports tree
414:debug:main gmp 6.1.2_1  is the latest installed
415:debug:main gmp 6.1.2_1  is active
416:debug:main Merging existing variants '' into variants
417:debug:main new fully merged portvariants:
418:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/gmp
419:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
420:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
421:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
422:debug:main universal variant already exists, so not adding the default one
423:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
424:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
425:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
426:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
427:debug:main No need to upgrade! gmp 6.1.2_1 >= gmp 6.1.2_1
428:debug:main epoch: in tree: 2 installed: 2
429:debug:main isl 0.18_0 exists in the ports tree
430:debug:main isl 0.18_0  is the latest installed
431:debug:main isl 0.18_0  is active
432:debug:main Merging existing variants '' into variants
433:debug:main new fully merged portvariants:
434:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/isl
435:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
436:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
437:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
438:debug:main universal variant already exists, so not adding the default one
439:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
440:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
441:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
442:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
443:debug:main No need to upgrade! isl 0.18_0 >= isl 0.18_0
444:debug:main epoch: in tree: 2 installed: 2
445:debug:main ld64 3_0 exists in the ports tree
446:debug:main ld64 3_0 +ld64_xcode is the latest installed
447:debug:main ld64 3_0 +ld64_xcode is active
448:debug:main Merging existing variants '+ld64_xcode' into variants
449:debug:main new fully merged portvariants: ld64_xcode +
450:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/ld64
451:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
452:debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl
453:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
454:debug:main universal variant already exists, so not adding the default one
455:debug:main Executing variant ld64_xcode provides ld64_xcode
456:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
457:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
458:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
459:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
460:debug:main No need to upgrade! ld64 3_0 >= ld64 3_0
461:debug:main epoch: in tree: 2 installed: 2
462:debug:main ld64-xcode 2_0 exists in the ports tree
463:debug:main ld64-xcode 2_0  is the latest installed
464:debug:main ld64-xcode 2_0  is active
465:debug:main Merging existing variants '' into variants
466:debug:main new fully merged portvariants:
467:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/ld64
468:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
469:debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl
470:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
471:debug:main universal variant already exists, so not adding the default one
472:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
473:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
474:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
475:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
476:debug:main No need to upgrade! ld64-xcode 2_0 >= ld64-xcode 2_0
477:debug:main epoch: in tree: 2 installed: 2
478:debug:main libgcc 7.2.0_0 exists in the ports tree
479:debug:main libgcc 7.2.0_0  is the latest installed
480:debug:main libgcc 7.2.0_0  is active
481:debug:main Merging existing variants '' into variants
482:debug:main new fully merged portvariants:
483:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/lang/gcc7
484:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
485:debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
486:debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl
487:debug:main compiler llvm-gcc-4.2 blacklisted because it's not installed or it doesn't work
488:debug:main compiler clang 802.0.42 not blacklisted because it doesn't match {clang < 300}
489:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
490:debug:main universal variant already exists, so not adding the default one
491:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
492:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
493:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
494:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
495:debug:main No need to upgrade! libgcc 7.2.0_0 >= libgcc 7.2.0_0
496:debug:main epoch: in tree: 0 installed: 0
497:debug:main libmpc 1.0.3_0 exists in the ports tree
498:debug:main libmpc 1.0.3_0  is the latest installed
499:debug:main libmpc 1.0.3_0  is active
500:debug:main Merging existing variants '' into variants
501:debug:main new fully merged portvariants:
502:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/libmpc
503:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
504:debug:main adding the default universal variant
505:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
506:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
507:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
508:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
509:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
510:debug:main No need to upgrade! libmpc 1.0.3_0 >= libmpc 1.0.3_0
511:debug:main epoch: in tree: 0 installed: 0
512:debug:main mpfr 3.1.5_0 exists in the ports tree
513:debug:main mpfr 3.1.5_0  is the latest installed
514:debug:main mpfr 3.1.5_0  is active
515:debug:main Merging existing variants '' into variants
516:debug:main new fully merged portvariants:
517:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/mpfr
518:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
519:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
520:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
521:debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl
522:debug:main compiler clang 802.0.42 not blacklisted because it doesn't match {clang == 211.10.1}
523:debug:main universal variant already exists, so not adding the default one
524:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
525:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
526:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
527:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
528:debug:main No need to upgrade! mpfr 3.1.5_0 >= mpfr 3.1.5_0
529:debug:main epoch: in tree: 0 installed: 0
530:debug:main gcc_select 0.1_8 exists in the ports tree
531:debug:main gcc_select 0.1_8  is the latest installed
532:debug:main gcc_select 0.1_8  is active
533:debug:main Merging existing variants '' into variants
534:debug:main new fully merged portvariants:
535:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/sysutils/gcc_select
536:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
537:debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
538:debug:main universal_variant is false, so not adding the default universal variant
539:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
540:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
541:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
542:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
543:debug:main No need to upgrade! gcc_select 0.1_8 >= gcc_select 0.1_8
544:debug:main epoch: in tree: 2 installed: 2
545:debug:main libgcc6 6.4.0_0 exists in the ports tree
546:debug:main libgcc6 6.4.0_0  is the latest installed
547:debug:main libgcc6 6.4.0_0  is active
548:debug:main Merging existing variants '' into variants
549:debug:main new fully merged portvariants:
550:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/lang/gcc6
551:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
552:debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
553:debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl
554:debug:main compiler llvm-gcc-4.2 blacklisted because it's not installed or it doesn't work
555:debug:main compiler clang 802.0.42 not blacklisted because it doesn't match {clang < 300}
556:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
557:debug:main universal variant already exists, so not adding the default one
558:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
559:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
560:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
561:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
562:debug:main No need to upgrade! libgcc6 6.4.0_0 >= libgcc6 6.4.0_0
563:debug:main epoch: in tree: 0 installed: 0
564:debug:main mpi_select 0.0_3 exists in the ports tree
565:debug:main mpi_select 0.0_3  is the latest installed
566:debug:main mpi_select 0.0_3  is active
567:debug:main Merging existing variants '' into variants
568:debug:main new fully merged portvariants:
569:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/sysutils/mpi_select
570:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
571:debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
572:debug:main universal_variant is false, so not adding the default universal variant
573:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
574:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
575:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
576:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
577:debug:main No need to upgrade! mpi_select 0.0_3 >= mpi_select 0.0_3
578:debug:main epoch: in tree: 0 installed: 0
579:debug:main mpi-doc 3.2_0 exists in the ports tree
580:debug:main mpi-doc 3.2_0  is the latest installed
581:debug:main mpi-doc 3.2_0  is active
582:debug:main Merging existing variants '' into variants
583:debug:main new fully merged portvariants:
584:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/science/mpi-doc
585:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
586:debug:main universal_variant is false, so not adding the default universal variant
587:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
588:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
589:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
590:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
591:debug:main No need to upgrade! mpi-doc 3.2_0 >= mpi-doc 3.2_0
592:debug:main epoch: in tree: 0 installed: 0
593:debug:main hdf5 1.10.1_1 exists in the ports tree
594:debug:main hdf5 1.10.1_1 +cxx+fortran+gcc6+hl+openmpi is the latest installed
595:debug:main hdf5 1.10.1_1 +cxx+fortran+gcc6+hl+openmpi is active
596:debug:main Merging existing variants '+cxx+fortran+gcc6+hl+openmpi' into variants
597:debug:main new fully merged portvariants: openmpi + hl + fortran + gcc6 + cxx +
598:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/science/hdf5
599:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
600:debug:main Sourcing PortGroup conflicts_build 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/conflicts_build-1.0.tcl
601:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
602:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
603:debug:main Sourcing PortGroup active_variants 1.1 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/active_variants-1.1.tcl
604:debug:main Sourcing PortGroup compilers 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compilers-1.0.tcl
605:debug:main Sourcing PortGroup mpi 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/mpi-1.0.tcl
606:debug:main universal variant already exists, so not adding the default one
607:debug:main Executing variant gcc6 provides gcc6
608:debug:main Executing variant openmpi provides openmpi
609:debug:main Executing variant hl provides hl
610:debug:main Executing variant cxx provides cxx
611:debug:main Executing variant fortran provides fortran
612:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
613:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
614:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
615:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
616:debug:main No need to upgrade! hdf5 1.10.1_1 >= hdf5 1.10.1_1
617:debug:main epoch: in tree: 0 installed: 0
618:debug:main openmpi-gcc6 1.10.3_0 exists in the ports tree
619:debug:main openmpi-gcc6 1.10.3_0 +fortran is the latest installed
620:debug:main openmpi-gcc6 1.10.3_0 +fortran+threads+valgrind is active
621:debug:main Merging existing variants '+fortran+threads+valgrind' into variants
622:debug:main new fully merged portvariants: fortran + valgrind + threads +
623:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/science/openmpi
624:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
625:debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl
626:debug:main Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl
627:debug:main Sourcing PortGroup active_variants 1.1 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/active_variants-1.1.tcl
628:debug:main Sourcing PortGroup compilers 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compilers-1.0.tcl
629:debug:main universal_variant is false, so not adding the default universal variant
630:debug:main Executing variant fortran provides fortran
631:debug:main Executing variant threads provides threads
632:debug:main Executing variant valgrind provides valgrind
633:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
634:debug:main Chosen compiler macports-gcc-6 is provided by a port, adding dependency
635:debug:main Adding depends_lib port:gcc6
636:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
637:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
638:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
639:debug:main No need to upgrade! openmpi-gcc6 1.10.3_0 >= openmpi-gcc6 1.10.3_0
640:debug:main Found Dependency: path: /opt/local/lib/pkgconfig filename: valgrind.pc regex: ^valgrind.pc$
641:debug:main epoch: in tree: 0 installed: 0
642:debug:main valgrind-devel 3.14.0-r16454_0 exists in the ports tree
643:debug:main valgrind-devel 3.14.0-r16454_0 +gcc6+openmpi is the latest installed
644:debug:main valgrind-devel 3.14.0-r16454_0 +gcc6+openmpi is active
645:debug:main Merging existing variants '+gcc6+openmpi' into variants
646:debug:main new fully merged portvariants: openmpi + gcc6 +
647:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/valgrind
648:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
649:debug:main Sourcing PortGroup active_variants 1.1 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/active_variants-1.1.tcl
650:debug:main Sourcing PortGroup compilers 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compilers-1.0.tcl
651:debug:main Sourcing PortGroup mpi 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/mpi-1.0.tcl
652:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
653:debug:main universal variant already exists, so not adding the default one
654:debug:main Executing variant gcc6 provides gcc6
655:debug:main Executing variant openmpi provides openmpi
656:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
657:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
658:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
659:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
660:debug:main No need to upgrade! valgrind-devel 3.14.0-r16454_0 >= valgrind-devel 3.14.0-r16454_0
661:debug:main epoch: in tree: 0 installed: 0
662:debug:main curl 7.55.1_0 exists in the ports tree
663:debug:main curl 7.55.1_0 +ssl is the latest installed
664:debug:main curl 7.55.1_0 +ssl is active
665:debug:main Merging existing variants '+ssl' into variants
666:debug:main new fully merged portvariants: ssl +
667:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/net/curl
668:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
669:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
670:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
671:debug:main universal variant already exists, so not adding the default one
672:debug:main Executing variant ssl provides ssl
673:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
674:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
675:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
676:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
677:debug:main No need to upgrade! curl 7.55.1_0 >= curl 7.55.1_0
678:debug:main epoch: in tree: 0 installed: 0
679:debug:main curl-ca-bundle 7.55.1_0 exists in the ports tree
680:debug:main curl-ca-bundle 7.55.1_0  is the latest installed
681:debug:main curl-ca-bundle 7.55.1_0  is active
682:debug:main Merging existing variants '' into variants
683:debug:main new fully merged portvariants:
684:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/net/curl
685:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
686:debug:main universal_variant is false, so not adding the default universal variant
687:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
688:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
689:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
690:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
691:debug:main No need to upgrade! curl-ca-bundle 7.55.1_0 >= curl-ca-bundle 7.55.1_0
692:debug:main epoch: in tree: 0 installed: 0
693:debug:main proj 4.9.3_0 exists in the ports tree
694:debug:main proj 4.9.3_0  is the latest installed
695:debug:main proj 4.9.3_0  is active
696:debug:main Merging existing variants '' into variants
697:debug:main new fully merged portvariants:
698:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/gis/proj
699:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
700:debug:main adding the default universal variant
701:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
702:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
703:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
704:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
705:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
706:debug:main No need to upgrade! proj 4.9.3_0 >= proj 4.9.3_0
707:debug:main epoch: in tree: 0 installed: 0
708:debug:main fftw-3 3.3.5_0 exists in the ports tree
709:debug:main fftw-3 3.3.5_0 +gcc6+openmpi is the latest installed
710:debug:main fftw-3 3.3.5_0 +gcc6+openmpi is active
711:debug:main Merging existing variants '+gcc6+openmpi' into variants
712:debug:main new fully merged portvariants: openmpi + gcc6 +
713:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/math/fftw-3
714:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
715:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
716:debug:main Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl
717:debug:main Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl
718:debug:main Sourcing PortGroup active_variants 1.1 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/active_variants-1.1.tcl
719:debug:main Sourcing PortGroup compilers 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compilers-1.0.tcl
720:debug:main Sourcing PortGroup mpi 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/mpi-1.0.tcl
721:debug:main compiler clang 802.0.42 not blacklisted because it doesn't match {clang <= 211.10.1}
722:debug:main universal variant already exists, so not adding the default one
723:debug:main Executing variant gcc6 provides gcc6
724:debug:main Executing variant openmpi provides openmpi
725:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
726:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
727:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
728:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
729:debug:main No need to upgrade! fftw-3 3.3.5_0 >= fftw-3 3.3.5_0
730:msg:main --->  Computing dependencies for cdo:info:main .:debug:main cdo has no conflicts
731:debug:main Searching for dependency: netcdf
732:debug:main Found Dependency: receipt exists for netcdf
733:debug:main Searching for dependency: hdf5
734:debug:main Found Dependency: receipt exists for hdf5
735:debug:main Searching for dependency: curl
736:debug:main Found Dependency: receipt exists for curl
737:debug:main Searching for dependency: udunits2
738:debug:main Didn't find receipt, going to depspec regex for: udunits2
739:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/science/udunits2
740:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
741:debug:main Sourcing PortGroup github 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/github-1.0.tcl
742:debug:main Re-registering default for configure.dir
743:debug:main Re-registering default for configure.pre_args
744:debug:main Re-registering default for build.dir
745:debug:main Re-registering default for destroot.target
746:debug:main Sourcing PortGroup cmake 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/cmake-1.0.tcl
747:debug:main adding the default universal variant
748:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
749:debug:main Requested variant +openmpi is not provided by port udunits2.
750:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
751:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
752:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
753:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
754:debug:main Searching for dependency: proj
755:debug:main Found Dependency: receipt exists for proj
756:debug:main Searching for dependency: fftw-3
757:debug:main Found Dependency: receipt exists for fftw-3
758:debug:main Searching for dependency: openmpi-default
759:debug:main Found Dependency: receipt exists for openmpi-default
760:info:main .:debug:main udunits2 has no conflicts
761:debug:main Searching for dependency: cmake
762:debug:main Found Dependency: receipt exists for cmake
763:debug:main Searching for dependency: expat
764:debug:main Found Dependency: receipt exists for expat
765:debug:main Searching for dependency: cunit
766:debug:main Didn't find receipt, going to depspec regex for: cunit
767:debug:main Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/cunit
768:debug:main OS darwin/16.7.0 (Mac OS X 10.12) arch i386
769:debug:main adding the default universal variant
770:debug:main Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf
771:debug:main Requested variant +openmpi is not provided by port cunit.
772:debug:main Running callback portconfigure::add_automatic_compiler_dependencies
773:debug:main Finished running callback portconfigure::add_automatic_compiler_dependencies
774:debug:main Running callback portbuild::add_automatic_buildsystem_dependencies
775:debug:main Finished running callback portbuild::add_automatic_buildsystem_dependencies
776:info:main .:debug:main cunit has no conflicts
777:debug:main Searching for dependency: ncurses
778:debug:main Found Dependency: receipt exists for ncurses
779:msg:main --->  Dependencies to be installed: udunits2 cunit
780:debug:main Starting logging for cunit
781:debug:clean Starting logging for udunits2
782:debug:main Executing org.macports.main (cdo)
783:debug:main dropping privileges: euid changed to 501, egid changed to 501.
784:debug:archivefetch archivefetch phase started at Tue Sep  5 19:15:59 BST 2017
785:msg:archivefetch --->  Fetching archive for cdo
786:debug:archivefetch Executing proc-pre-org.macports.archivefetch-archivefetch-0
787:debug:archivefetch Active variants check for archivefetch-type install considers depends_lib depends_run: netcdf hdf5 curl udunits2 proj fftw-3 openmpi-default
788:debug:archivefetch Ignoring active_variants requirement for openmpi because archivefetch-type install only considers depends_lib depends_run and those do not contain openmpi
789:debug:archivefetch Executing org.macports.archivefetch (cdo)
790:debug:archivefetch euid/egid changed to: 0/0
791:debug:archivefetch chowned /opt/local/var/macports/incoming to macports
792:debug:archivefetch euid/egid changed to: 501/501
793:info:archivefetch --->  cdo-1.9.0_0+openmpi.darwin_16.x86_64.tbz2 doesn't seem to exist in /opt/local/var/macports/incoming/verified
794:msg:archivefetch --->  Attempting to fetch cdo-1.9.0_0+openmpi.darwin_16.x86_64.tbz2 from https://packages.macports.org/cdo
795:debug:archivefetch Fetching archive failed: The requested URL returned error: 404 Not Found
796:msg:archivefetch --->  Attempting to fetch cdo-1.9.0_0+openmpi.darwin_16.x86_64.tbz2 from http://mse.uk.packages.macports.org/sites/packages.macports.org/cdo
797:debug:archivefetch Fetching archive failed: The requested URL returned error: 404 Not Found
798:msg:archivefetch --->  Attempting to fetch cdo-1.9.0_0+openmpi.darwin_16.x86_64.tbz2 from http://lil.fr.packages.macports.org/cdo
799:debug:archivefetch Fetching archive failed: The requested URL returned error: 404 Not Found
800:debug:archivefetch Privilege de-escalation not attempted as not running as root.
801:debug:fetch fetch phase started at Tue Sep  5 19:15:59 BST 2017
802:notice:fetch --->  Fetching distfiles for cdo
803:debug:fetch elevating privileges for fetch: euid changed to 0, egid changed to 0.
804:debug:fetch dropping privileges: euid changed to 501, egid changed to 501.
805:debug:fetch Executing proc-pre-org.macports.fetch-fetch-0
806:debug:fetch compilers.enforce_c list:
807:debug:fetch compilers.enforce_fortran list:
808:debug:fetch compilers.enforce_some_fortran list:
809:debug:fetch Executing proc-pre-org.macports.fetch-fetch-1
810:debug:fetch Executing proc-pre-org.macports.fetch-fetch-2
811:debug:fetch mpi.enforce_variant list: hdf5
812:debug:fetch hdf5 is installed with the following variants: +cxx+fortran+gcc6+hl+openmpi
813:debug:fetch   required: , forbidden:
814:debug:fetch   accepted
815:debug:fetch hdf5 is installed with the following variants: +cxx+fortran+gcc6+hl+openmpi
816:debug:fetch   required: mpich, forbidden:
817:debug:fetch   rejected, because required variant mpich is missing
818:debug:fetch hdf5 is installed with the following variants: +cxx+fortran+gcc6+hl+openmpi
819:debug:fetch   required: mpich_devel, forbidden:
820:debug:fetch   rejected, because required variant mpich_devel is missing
821:debug:fetch hdf5 is installed with the following variants: +cxx+fortran+gcc6+hl+openmpi
822:debug:fetch   required: openmpi, forbidden:
823:debug:fetch   accepted
824:debug:fetch compilers.enforce_c list: hdf5
825:debug:fetch hdf5 is installed with the following variants: +cxx+fortran+gcc6+hl+openmpi
826:debug:fetch   required: , forbidden:
827:debug:fetch   accepted
828:debug:fetch Executing org.macports.fetch (cdo)
829:info:fetch --->  cdo-1.9.0.tar.gz does not exist in /opt/local/var/macports/distfiles/cdo
830:notice:fetch --->  Attempting to fetch cdo-1.9.0.tar.gz from https://distfiles.macports.org/cdo
831:debug:fetch Fetching distfile failed: The requested URL returned error: 404 Not Found
832:notice:fetch --->  Attempting to fetch cdo-1.9.0.tar.gz from http://mse.uk.distfiles.macports.org/sites/distfiles.macports.org/cdo
833:debug:fetch Fetching distfile failed: The requested URL returned error: 404 Not Found
834:notice:fetch --->  Attempting to fetch cdo-1.9.0.tar.gz from http://lil.fr.distfiles.macports.org/cdo
835:debug:fetch Fetching distfile failed: The requested URL returned error: 404 Not Found
836:notice:fetch --->  Attempting to fetch cdo-1.9.0.tar.gz from https://code.zmaw.de/attachments/download/15187
837:debug:fetch Privilege de-escalation not attempted as not running as root.
838:debug:checksum checksum phase started at Tue Sep  5 19:16:00 BST 2017
839:notice:checksum --->  Verifying checksums for cdo
840:debug:checksum Executing org.macports.checksum (cdo)
841:info:checksum --->  Checksumming cdo-1.9.0.tar.gz
842:debug:checksum Calculated (rmd160) is b93ab949d56bc0dbaea3998a8995678c703c9f95
843:debug:checksum Correct (rmd160) checksum for cdo-1.9.0.tar.gz
844:debug:checksum Calculated (sha256) is df367f8c3abf4ab085bcfc61e0205b28a5ecc69b7b83ba398b4d3c874dd69008
845:debug:checksum Correct (sha256) checksum for cdo-1.9.0.tar.gz
846:debug:checksum Privilege de-escalation not attempted as not running as root.
847:debug:extract extract phase started at Tue Sep  5 19:16:00 BST 2017
848:notice:extract --->  Extracting cdo
849:debug:extract Executing org.macports.extract (cdo)
850:info:extract --->  Extracting cdo-1.9.0.tar.gz
851:debug:extract setting option extract.args to '/opt/local/var/macports/distfiles/cdo/cdo-1.9.0.tar.gz'
852:debug:extract Environment:
853:debug:extract CC_PRINT_OPTIONS='YES'
854:debug:extract CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/.CC_PRINT_OPTIONS'
855:debug:extract CPATH='/opt/local/include'
856:debug:extract LIBRARY_PATH='/opt/local/lib'
857:debug:extract MACOSX_DEPLOYMENT_TARGET='10.12'
858:info:extract Executing:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work" && /usr/bin/gzip -dc '/opt/local/var/macports/distfiles/cdo/cdo-1.9.0.tar.gz' | /usr/bin/tar -xf -
859:debug:extract system:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work" && /usr/bin/gzip -dc '/opt/local/var/macports/distfiles/cdo/cdo-1.9.0.tar.gz' | /usr/bin/tar -xf -
860:debug:extract euid/egid changed to: 0/0
861:debug:extract chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work to macports
862:debug:extract euid/egid changed to: 501/501
863:debug:extract Privilege de-escalation not attempted as not running as root.
864:debug:patch patch phase started at Tue Sep  5 19:16:01 BST 2017
865:debug:patch Executing org.macports.patch (cdo)
866:debug:patch Privilege de-escalation not attempted as not running as root.
867:debug:configure configure phase started at Tue Sep  5 19:16:01 BST 2017
868:notice:configure --->  Configuring cdo
869:debug:configure Preferred compilers: clang macports-clang-3.9 macports-clang-3.8 macports-clang-3.7
870:debug:configure Using compiler 'Xcode Clang'
871:debug:configure Executing proc-pre-org.macports.configure-configure-0
872:debug:configure Active variants check for source-type install considers depends_fetch depends_extract depends_lib depends_build depends_run: netcdf hdf5 curl udunits2 proj fftw-3 openmpi-default
873:debug:configure Ignoring active_variants requirement for openmpi because source-type install only considers depends_fetch depends_extract depends_lib depends_build depends_run and those do not contain openmpi
874:debug:configure Executing proc-pre-org.macports.configure-configure-1
875:debug:configure Executing org.macports.configure (cdo)
876:debug:configure Environment:
877:debug:configure CC='/opt/local/bin/mpicc-openmpi-mp'
878:debug:configure CC_PRINT_OPTIONS='YES'
879:debug:configure CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/.CC_PRINT_OPTIONS'
880:debug:configure CFLAGS='-pipe -Os -arch x86_64'
881:debug:configure CPATH='/opt/local/include'
882:debug:configure CPPFLAGS='-I/opt/local/include -I/opt/local/include/udunits2'
883:debug:configure CXX='/usr/bin/clang++'
884:debug:configure CXXFLAGS='-pipe -Os -stdlib=libc++ -arch x86_64'
885:debug:configure F77FLAGS='-m64'
886:debug:configure F90FLAGS='-pipe -Os -m64'
887:debug:configure FC='/opt/local/bin/mpif90-openmpi-mp'
888:debug:configure FCFLAGS='-pipe -Os -m64'
889:debug:configure FFLAGS='-pipe -Os'
890:debug:configure INSTALL='/usr/bin/install -c'
891:debug:configure LDFLAGS='-L/opt/local/lib -Wl,-headerpad_max_install_names -lhdf5 -arch x86_64'
892:debug:configure LIBRARY_PATH='/opt/local/lib'
893:debug:configure MACOSX_DEPLOYMENT_TARGET='10.12'
894:debug:configure OBJC='/usr/bin/clang'
895:debug:configure OBJCFLAGS='-pipe -Os -arch x86_64'
896:debug:configure OBJCXX='/usr/bin/clang++'
897:debug:configure OBJCXXFLAGS='-pipe -Os -stdlib=libc++ -arch x86_64'
898:info:configure Executing:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.0" && ./configure --prefix=/opt/local --with-netcdf=/opt/local --disable-dependency-tracking --disable-openmp --with-proj=/opt/local --with-hdf5=/opt/local --with-udunits2=/opt/local --with-fftw3 --with-curl=/opt/local --with-zlib=/opt/local
899:debug:configure system:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.0" && ./configure --prefix=/opt/local --with-netcdf=/opt/local --disable-dependency-tracking --disable-openmp --with-proj=/opt/local --with-hdf5=/opt/local --with-udunits2=/opt/local --with-fftw3 --with-curl=/opt/local --with-zlib=/opt/local
900:info:configure checking build system type... x86_64-apple-darwin16.7.0
901:info:configure checking host system type... x86_64-apple-darwin16.7.0
902:info:configure checking for a BSD-compatible install... /usr/bin/install -c
903:info:configure checking whether build environment is sane... yes
904:info:configure checking for a thread-safe mkdir -p... config/install-sh -c -d
905:info:configure checking for gawk... gawk
906:info:configure checking whether make sets $(MAKE)... yes
907:info:configure checking whether make supports nested variables... yes
908:info:configure checking whether to enable maintainer-specific portions of Makefiles... no
909:info:configure checking for style of include used by make... GNU
910:info:configure checking for gcc... /opt/local/bin/mpicc-openmpi-mp
911:info:configure checking whether the C compiler works... yes
912:info:configure checking for C compiler default output file name... a.out
913:info:configure checking for suffix of executables...
914:info:configure checking whether we are cross compiling... no
915:info:configure checking for suffix of object files... o
916:info:configure checking whether we are using the GNU C compiler... yes
917:info:configure checking whether /opt/local/bin/mpicc-openmpi-mp accepts -g... yes
918:info:configure checking for /opt/local/bin/mpicc-openmpi-mp option to accept ISO C89... none needed
919:info:configure checking whether /opt/local/bin/mpicc-openmpi-mp understands -c and -o together... yes
920:info:configure checking dependency style of /opt/local/bin/mpicc-openmpi-mp... none
921:info:configure checking for ar... ar
922:info:configure checking the archiver (ar) interface... ar
923:info:configure configure: setting up libtool
924:info:configure checking how to print strings... printf
925:info:configure checking for a sed that does not truncate output... /usr/bin/sed
926:info:configure checking for grep that handles long lines and -e... /usr/bin/grep
927:info:configure checking for egrep... /usr/bin/grep -E
928:info:configure checking for fgrep... /usr/bin/grep -F
929:info:configure checking for ld used by /opt/local/bin/mpicc-openmpi-mp... /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld
930:info:configure checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld... no
931:info:configure checking for BSD- or MS-compatible name lister (nm)... /opt/local/bin/nm -B
932:info:configure checking the name lister (/opt/local/bin/nm -B) interface... BSD nm
933:info:configure checking whether ln -s works... yes
934:info:configure checking the maximum length of command line arguments... 196608
935:info:configure checking whether the shell understands some XSI constructs... yes
936:info:configure checking whether the shell understands "+="... yes
937:info:configure checking how to convert x86_64-apple-darwin16.7.0 file names to x86_64-apple-darwin16.7.0 format... func_convert_file_noop
938:info:configure checking how to convert x86_64-apple-darwin16.7.0 file names to toolchain format... func_convert_file_noop
939:info:configure checking for /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld option to reload object files... -r
940:info:configure checking for objdump... objdump
941:info:configure checking how to recognize dependent libraries... pass_all
942:info:configure checking for dlltool... no
943:info:configure checking how to associate runtime and link libraries... printf %s\n
944:info:configure checking for archiver @FILE support... no
945:info:configure checking for strip... strip
946:info:configure checking for ranlib... ranlib
947:info:configure checking command to parse /opt/local/bin/nm -B output from /opt/local/bin/mpicc-openmpi-mp object... ok
948:info:configure checking for sysroot... no
949:info:configure checking for mt... no
950:info:configure checking if : is a manifest tool... no
951:info:configure checking for dsymutil... dsymutil
952:info:configure checking for nmedit... nmedit
953:info:configure checking for lipo... lipo
954:info:configure checking for otool... otool
955:info:configure checking for otool64... no
956:info:configure checking for -single_module linker flag... yes
957:info:configure checking for -exported_symbols_list linker flag... yes
958:info:configure checking for -force_load linker flag... yes
959:info:configure checking how to run the C preprocessor... /opt/local/bin/mpicc-openmpi-mp -E
960:info:configure checking for ANSI C header files... yes
961:info:configure checking for sys/types.h... yes
962:info:configure checking for sys/stat.h... yes
963:info:configure checking for stdlib.h... yes
964:info:configure checking for string.h... yes
965:info:configure checking for memory.h... yes
966:info:configure checking for strings.h... yes
967:info:configure checking for inttypes.h... yes
968:info:configure checking for stdint.h... yes
969:info:configure checking for unistd.h... yes
970:info:configure checking for dlfcn.h... yes
971:info:configure checking for objdir... .libs
972:info:configure checking if /opt/local/bin/mpicc-openmpi-mp supports -fno-rtti -fno-exceptions... yes
973:info:configure checking for /opt/local/bin/mpicc-openmpi-mp option to produce PIC... -fno-common -DPIC
974:info:configure checking if /opt/local/bin/mpicc-openmpi-mp PIC flag -fno-common -DPIC works... yes
975:info:configure checking if /opt/local/bin/mpicc-openmpi-mp static flag -static works... no
976:info:configure checking if /opt/local/bin/mpicc-openmpi-mp supports -c -o file.o... yes
977:info:configure checking if /opt/local/bin/mpicc-openmpi-mp supports -c -o file.o... (cached) yes
978:info:configure checking whether the /opt/local/bin/mpicc-openmpi-mp linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes
979:info:configure checking dynamic linker characteristics... darwin16.7.0 dyld
980:info:configure checking how to hardcode library paths into programs... immediate
981:info:configure checking whether stripping libraries is possible... yes
982:info:configure checking if libtool supports shared libraries... yes
983:info:configure checking whether to build shared libraries... yes
984:info:configure checking whether to build static libraries... yes
985:info:configure checking for bash... /bin/sh
986:info:configure checking for gcc... (cached) /opt/local/bin/mpicc-openmpi-mp
987:info:configure checking for g++... /usr/bin/clang++
988:info:configure checking for /opt/local/bin/mpicc-openmpi-mp option to accept ISO C99... none needed
989:info:configure checking whether we are using the GNU C++ compiler... yes
990:info:configure checking whether /usr/bin/clang++ accepts -g... yes
991:info:configure checking dependency style of /usr/bin/clang++... none
992:info:configure checking how to run the C++ preprocessor... /usr/bin/clang++ -E
993:info:configure checking for ld used by /usr/bin/clang++... /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld
994:info:configure checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld... no
995:info:configure checking whether the /usr/bin/clang++ linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes
996:info:configure checking for /usr/bin/clang++ option to produce PIC... -fno-common -DPIC
997:info:configure checking if /usr/bin/clang++ PIC flag -fno-common -DPIC works... yes
998:info:configure checking if /usr/bin/clang++ static flag -static works... no
999:info:configure checking if /usr/bin/clang++ supports -c -o file.o... yes
1000:info:configure checking if /usr/bin/clang++ supports -c -o file.o... (cached) yes
1001:info:configure checking whether the /usr/bin/clang++ linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes
1002:info:configure checking dynamic linker characteristics... darwin16.7.0 dyld
1003:info:configure checking how to hardcode library paths into programs... immediate
1004:info:configure checking for C/C++ restrict keyword... __restrict
1005:info:configure checking whether /usr/bin/clang++ supports C++11 features by default... no
1006:info:configure checking whether /usr/bin/clang++ supports C++11 features with -std=gnu++11... yes
1007:info:configure checking for ar... (cached) ar
1008:info:configure checking for ld... /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld
1009:info:configure checking for nm... /opt/local/bin/nm -B
1010:info:configure checking for ar... (cached) ar
1011:info:configure checking for as... as
1012:info:configure checking for dlltool... false
1013:info:configure checking for objdump... (cached) objdump
1014:info:configure checking for strip... (cached) strip
1015:info:configure checking for ranlib... (cached) ranlib
1016:info:configure checking for special C compiler options needed for large files... no
1017:info:configure checking for _FILE_OFFSET_BITS value needed for large files... no
1018:info:configure checking for stdlib.h... (cached) yes
1019:info:configure checking for unistd.h... (cached) yes
1020:info:configure checking for sys/param.h... yes
1021:info:configure checking for getpagesize... yes
1022:info:configure checking for working mmap... yes
1023:info:configure checking for malloc in -lmalloc... no
1024:info:configure checking for struct stat.st_blksize... yes
1025:info:configure checking sys/resource.h usability... yes
1026:info:configure checking sys/resource.h presence... yes
1027:info:configure checking for sys/resource.h... yes
1028:info:configure checking sys/times.h usability... yes
1029:info:configure checking sys/times.h presence... yes
1030:info:configure checking for sys/times.h... yes
1031:info:configure checking malloc.h usability... no
1032:info:configure checking malloc.h presence... no
1033:info:configure checking for malloc.h... no
1034:info:configure checking glob.h usability... yes
1035:info:configure checking glob.h presence... yes
1036:info:configure checking for glob.h... yes
1037:info:configure checking fnmatch.h usability... yes
1038:info:configure checking fnmatch.h presence... yes
1039:info:configure checking for fnmatch.h... yes
1040:info:configure checking wordexp.h usability... yes
1041:info:configure checking wordexp.h presence... yes
1042:info:configure checking for wordexp.h... yes
1043:info:configure checking execinfo.h usability... yes
1044:info:configure checking execinfo.h presence... yes
1045:info:configure checking for execinfo.h... yes
1046:info:configure checking for mallinfo... no
1047:info:configure checking for backtrace... yes
1048:info:configure checking for getrlimit... yes
1049:info:configure checking for gethostname... yes
1050:info:configure checking for floor in -lm... yes
1051:info:configure checking whether isnan is declared... yes
1052:info:configure checking for sqrtl... yes
1053:info:configure checking for feenableexcept... no
1054:info:configure checking for fenv_t.__control... yes
1055:info:configure checking for fenv_t.__mxcsr... yes
1056:info:configure checking for DATA support...
1057:info:configure checking if compiler needs -Werror to reject unknown flags... yes
1058:info:configure checking whether pthreads work with -pthread... yes
1059:info:configure checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE
1060:info:configure checking if more special flags are required for pthreads... -D_THREAD_SAFE
1061:info:configure checking for PTHREAD_PRIO_INHERIT... yes
1062:info:configure CC:/opt/local/bin/mpicc-openmpi-mp CFLAGS:-pipe -Os -arch x86_64  -D_THREAD_SAFE -pthread LIBS: -lm
1063:info:configure checking for szlib library... suppressed
1064:info:configure checking hdf5.h usability... yes
1065:info:configure checking hdf5.h presence... yes
1066:info:configure checking for hdf5.h... yes
1067:info:configure checking for library containing H5Fopen... none required
1068:info:configure checking for library containing H5DSis_scale... -lhdf5_hl
1069:info:configure checking netcdf.h usability... yes
1070:info:configure checking netcdf.h presence... yes
1071:info:configure checking for netcdf.h... yes
1072:info:configure checking for library containing nc_open... -lnetcdf
1073:info:configure checking nc-config script... checking for nc-config... /opt/local/bin/nc-config
1074:info:configure checking netcdf's OpenDAP support... yes
1075:info:configure checking netcdf's nc2 support... yes
1076:info:configure checking netcdf's nc4 support... yes
1077:info:configure checking netcdf's nc4/hdf5 support... yes
1078:info:configure checking for library containing H5TS_mutex_lock... no
1079:info:configure checking udunits2.h usability... yes
1080:info:configure checking udunits2.h presence... yes
1081:info:configure checking for udunits2.h... yes
1082:info:configure checking udunits2/udunits2.h usability... yes
1083:info:configure checking udunits2/udunits2.h presence... yes
1084:info:configure checking for udunits2/udunits2.h... yes
1085:info:configure checking for library containing ut_parse... -ludunits2
1086:info:configure checking for the CMOR library... suppressed
1087:info:configure checking for the ECCODES library... suppressed
1088:info:configure checking for the GRIB_API library... suppressed
1089:info:configure checking for GRIB support... yes
1090:info:configure checking for CGRIBEX support... yes
1091:info:configure checking for SERVICE support... yes
1092:info:configure checking for EXTRA support... yes
1093:info:configure checking for IEG support... yes
1094:info:configure checking for FFTW3 support... checking fftw3.h usability... yes
1095:info:configure checking fftw3.h presence... yes
1096:info:configure checking for fftw3.h... yes
1097:info:configure checking for library containing fftw_cleanup... -lfftw3
1098:info:configure checking proj_api.h usability... yes
1099:info:configure checking proj_api.h presence... yes
1100:info:configure checking for proj_api.h... yes
1101:info:configure checking for library containing pj_init... -lproj
1102:info:configure checking curl/curl.h usability... yes
1103:info:configure checking curl/curl.h presence... yes
1104:info:configure checking for curl/curl.h... yes
1105:info:configure checking for library containing curl_global_init... -lcurl
1106:info:configure checking for MAGICS library... suppressed
1107:info:configure checking for XML2 library... suppressed
1108:info:configure checking for build a separate CDI library and link CDO to it... no
1109:info:configure checking for building an additional static CDO binary... no
1110:info:configure checking for HIRLAM extensions... no
1111:info:configure checking if x86/amd64 assembler speaks SSE4.2... yes
1112:info:configure checking if x86/amd64 assembler speaks AVX... yes
1113:info:configure checking if x86/amd64 assembler speaks AVX2... yes
1114:info:configure checking for gawk... (cached) gawk
1115:info:configure checking that generated files are newer than configure... done
1116:info:configure configure: creating ./config.status
1117:info:configure config.status: creating test/File.test
1118:info:configure config.status: creating test/Read_grib.test
1119:info:configure config.status: creating test/Read_netcdf.test
1120:info:configure config.status: creating test/Copy_netcdf.test
1121:info:configure config.status: creating test/Comp.test
1122:info:configure config.status: creating test/Compc.test
1123:info:configure config.status: creating test/Cat.test
1124:info:configure config.status: creating test/Gridarea.test
1125:info:configure config.status: creating test/Genweights.test
1126:info:configure config.status: creating test/Remap.test
1127:info:configure config.status: creating test/Remap2.test
1128:info:configure config.status: creating test/EOF.test
1129:info:configure config.status: creating test/Select.test
1130:info:configure config.status: creating test/Spectral.test
1131:info:configure config.status: creating test/Vertint.test
1132:info:configure config.status: creating test/Timstat.test
1133:info:configure config.status: creating test/Timselstat.test
1134:info:configure config.status: creating test/Seasstat.test
1135:info:configure config.status: creating test/Runstat.test
1136:info:configure config.status: creating test/Multiyearstat.test
1137:info:configure config.status: creating test/Ydrunstat.test
1138:info:configure config.status: creating test/Gridboxstat.test
1139:info:configure config.status: creating test/Vertstat.test
1140:info:configure config.status: creating test/Fldstat.test
1141:info:configure config.status: creating test/Fldpctl.test
1142:info:configure config.status: creating test/Ensstat.test
1143:info:configure config.status: creating test/Enspctl.test
1144:info:configure config.status: creating test/Merstat.test
1145:info:configure config.status: creating test/Zonstat.test
1146:info:configure config.status: creating test/Mergetime.test
1147:info:configure config.status: creating test/Afterburner.test
1148:info:configure config.status: creating test/Detrend.test
1149:info:configure config.status: creating test/Arithc.test
1150:info:configure config.status: creating test/Arith.test
1151:info:configure config.status: creating test/Expr.test
1152:info:configure config.status: creating test/Gradsdes.test
1153:info:configure config.status: creating test/Collgrid.test
1154:info:configure config.status: creating test/threads.test
1155:info:configure config.status: creating test/tsformat.test
1156:info:configure config.status: creating test/wildcard.test
1157:info:configure config.status: creating test/MapReduce.test
1158:info:configure config.status: creating test/Ninfo.test
1159:info:configure config.status: creating Makefile
1160:info:configure config.status: creating src/Makefile
1161:info:configure config.status: creating contrib/Makefile
1162:info:configure config.status: creating test/Makefile
1163:info:configure config.status: creating test/data/Makefile
1164:info:configure config.status: creating cdo.spec
1165:info:configure config.status: creating cdo.settings
1166:info:configure config.status: creating src/config.h
1167:info:configure config.status: executing depfiles commands
1168:info:configure config.status: executing libtool commands
1169:info:configure === configuring in libcdi (/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.0/libcdi)
1170:info:configure configure: running /bin/sh ./configure --disable-option-checking '--prefix=/opt/local'  '--with-netcdf=/opt/local' '--disable-dependency-tracking' '--disable-openmp' '--with-proj=/opt/local' '--with-hdf5=/opt/local' '--with-udunits2=/opt/local' '--with-fftw3' '--with-curl=/opt/local' '--with-zlib=/opt/local' 'CC=/opt/local/bin/mpicc-openmpi-mp' 'CFLAGS=-pipe -Os -arch x86_64' 'LDFLAGS=-L/opt/local/lib -Wl,-headerpad_max_install_names -lhdf5 -arch x86_64' 'CPPFLAGS=-I/opt/local/include -I/opt/local/include/udunits2' 'CXX=/usr/bin/clang++' 'CXXFLAGS=-pipe -Os -stdlib=libc++ -arch x86_64' --cache-file=/dev/null --srcdir=.
1171:info:configure configuring cdi 1.9.0
1172:info:configure checking build system type... x86_64-apple-darwin16.7.0
1173:info:configure checking host system type... x86_64-apple-darwin16.7.0
1174:info:configure checking for a BSD-compatible install... /usr/bin/install -c
1175:info:configure checking whether build environment is sane... yes
1176:info:configure checking for a thread-safe mkdir -p... config/install-sh -c -d
1177:info:configure checking for gawk... gawk
1178:info:configure checking whether make sets $(MAKE)... yes
1179:info:configure checking whether make supports nested variables... yes
1180:info:configure checking whether to enable maintainer-specific portions of Makefiles... no
1181:info:configure checking for gcc... /opt/local/bin/mpicc-openmpi-mp
1182:info:configure checking for style of include used by make... GNU
1183:info:configure checking for gcc... (cached) /opt/local/bin/mpicc-openmpi-mp
1184:info:configure checking whether the C compiler works... yes
1185:info:configure checking for C compiler default output file name... a.out
1186:info:configure checking for suffix of executables...
1187:info:configure checking whether we are cross compiling... no
1188:info:configure checking for suffix of object files... o
1189:info:configure checking whether we are using the GNU C compiler... yes
1190:info:configure checking whether /opt/local/bin/mpicc-openmpi-mp accepts -g... yes
1191:info:configure checking for /opt/local/bin/mpicc-openmpi-mp option to accept ISO C89... none needed
1192:info:configure checking whether /opt/local/bin/mpicc-openmpi-mp understands -c and -o together... yes
1193:info:configure checking dependency style of /opt/local/bin/mpicc-openmpi-mp... none
1194:info:configure checking for /opt/local/bin/mpicc-openmpi-mp option to accept ISO C99... none needed
1195:info:configure checking For conformance to POSIX.1-2001.... yes
1196:info:configure checking for C/C++ restrict keyword... __restrict
1197:info:configure checking whether we are using the GNU Fortran compiler... no
1198:info:configure checking whether no accepts -g... no
1199:info:configure checking for g77... no
1200:info:configure checking for xlf... no
1201:info:configure checking for f77... no
1202:info:configure checking for frt... no
1203:info:configure checking for pgf77... no
1204:info:configure checking for cf77... no
1205:info:configure checking for fort77... no
1206:info:configure checking for fl32... no
1207:info:configure checking for af77... no
1208:info:configure checking for xlf90... no
1209:info:configure checking for f90... no
1210:info:configure checking for pgf90... no
1211:info:configure checking for pghpf... no
1212:info:configure checking for epcf90... no
1213:info:configure checking for gfortran... no
1214:info:configure checking for g95... no
1215:info:configure checking for xlf95... no
1216:info:configure checking for f95... no
1217:info:configure checking for fort... no
1218:info:configure checking for ifort... no
1219:info:configure checking for ifc... no
1220:info:configure checking for efc... no
1221:info:configure checking for pgfortran... no
1222:info:configure checking for pgf95... no
1223:info:configure checking for lf95... no
1224:info:configure checking for ftn... no
1225:info:configure checking whether we are using the GNU Fortran 77 compiler... no
1226:info:configure checking whether  accepts -g... no
1227:info:configure checking whether we are using the GNU C++ compiler... yes
1228:info:configure checking whether /usr/bin/clang++ accepts -g... yes
1229:info:configure checking dependency style of /usr/bin/clang++... none
1230:info:configure configure: setting up libtool
1231:info:configure checking any compiler has problems building shared objects... no
1232:info:configure checking how to print strings... printf
1233:info:configure checking for a sed that does not truncate output... /usr/bin/sed
1234:info:configure checking for grep that handles long lines and -e... /usr/bin/grep
1235:info:configure checking for egrep... /usr/bin/grep -E
1236:info:configure checking for fgrep... /usr/bin/grep -F
1237:info:configure checking for ld used by /opt/local/bin/mpicc-openmpi-mp... /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld
1238:info:configure checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld... no
1239:info:configure checking for BSD- or MS-compatible name lister (nm)... /opt/local/bin/nm -B
1240:info:configure checking the name lister (/opt/local/bin/nm -B) interface... BSD nm
1241:info:configure checking whether ln -s works... yes
1242:info:configure checking the maximum length of command line arguments... 196608
1243:info:configure checking whether the shell understands some XSI constructs... yes
1244:info:configure checking whether the shell understands "+="... yes
1245:info:configure checking how to convert x86_64-apple-darwin16.7.0 file names to x86_64-apple-darwin16.7.0 format... func_convert_file_noop
1246:info:configure checking how to convert x86_64-apple-darwin16.7.0 file names to toolchain format... func_convert_file_noop
1247:info:configure checking for /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld option to reload object files... -r
1248:info:configure checking for objdump... objdump
1249:info:configure checking how to recognize dependent libraries... pass_all
1250:info:configure checking for dlltool... no
1251:info:configure checking how to associate runtime and link libraries... printf %s\n
1252:info:configure checking for ar... ar
1253:info:configure checking for archiver @FILE support... no
1254:info:configure checking for strip... strip
1255:info:configure checking for ranlib... ranlib
1256:info:configure checking command to parse /opt/local/bin/nm -B output from /opt/local/bin/mpicc-openmpi-mp object... ok
1257:info:configure checking for sysroot... no
1258:info:configure checking for mt... no
1259:info:configure checking if : is a manifest tool... no
1260:info:configure checking for dsymutil... dsymutil
1261:info:configure checking for nmedit... nmedit
1262:info:configure checking for lipo... lipo
1263:info:configure checking for otool... otool
1264:info:configure checking for otool64... no
1265:info:configure checking for -single_module linker flag... yes
1266:info:configure checking for -exported_symbols_list linker flag... yes
1267:info:configure checking for -force_load linker flag... yes
1268:info:configure checking how to run the C preprocessor... /opt/local/bin/mpicc-openmpi-mp -E
1269:info:configure checking for ANSI C header files... yes
1270:info:configure checking for sys/types.h... yes
1271:info:configure checking for sys/stat.h... yes
1272:info:configure checking for stdlib.h... yes
1273:info:configure checking for string.h... yes
1274:info:configure checking for memory.h... yes
1275:info:configure checking for strings.h... yes
1276:info:configure checking for inttypes.h... yes
1277:info:configure checking for stdint.h... yes
1278:info:configure checking for unistd.h... yes
1279:info:configure checking for dlfcn.h... yes
1280:info:configure checking for objdir... .libs
1281:info:configure checking if /opt/local/bin/mpicc-openmpi-mp supports -fno-rtti -fno-exceptions... yes
1282:info:configure checking for /opt/local/bin/mpicc-openmpi-mp option to produce PIC... -fno-common -DPIC
1283:info:configure checking if /opt/local/bin/mpicc-openmpi-mp PIC flag -fno-common -DPIC works... yes
1284:info:configure checking if /opt/local/bin/mpicc-openmpi-mp static flag -static works... no
1285:info:configure checking if /opt/local/bin/mpicc-openmpi-mp supports -c -o file.o... yes
1286:info:configure checking if /opt/local/bin/mpicc-openmpi-mp supports -c -o file.o... (cached) yes
1287:info:configure checking whether the /opt/local/bin/mpicc-openmpi-mp linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes
1288:info:configure checking dynamic linker characteristics... darwin16.7.0 dyld
1289:info:configure checking how to hardcode library paths into programs... immediate
1290:info:configure checking whether stripping libraries is possible... yes
1291:info:configure checking if libtool supports shared libraries... yes
1292:info:configure checking whether to build shared libraries... yes
1293:info:configure checking whether to build static libraries... yes
1294:info:configure checking how to run the C++ preprocessor... /usr/bin/clang++ -E
1295:info:configure checking for ld used by /usr/bin/clang++... /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld
1296:info:configure checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld... no
1297:info:configure checking whether the /usr/bin/clang++ linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes
1298:info:configure checking for /usr/bin/clang++ option to produce PIC... -fno-common -DPIC
1299:info:configure checking if /usr/bin/clang++ PIC flag -fno-common -DPIC works... yes
1300:info:configure checking if /usr/bin/clang++ static flag -static works... no
1301:info:configure checking if /usr/bin/clang++ supports -c -o file.o... yes
1302:info:configure checking if /usr/bin/clang++ supports -c -o file.o... (cached) yes
1303:info:configure checking whether the /usr/bin/clang++ linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes
1304:info:configure checking dynamic linker characteristics... darwin16.7.0 dyld
1305:info:configure checking how to hardcode library paths into programs... immediate
1306:info:configure configure: creating ./config.lt
1307:info:configure config.lt: creating libtool
1308:info:configure checking whether byte ordering is bigendian... no
1309:info:configure checking for special C compiler options needed for large files... no
1310:info:configure checking for _FILE_OFFSET_BITS value needed for large files... no
1311:info:configure checking for stdlib.h... (cached) yes
1312:info:configure checking for unistd.h... (cached) yes
1313:info:configure checking for sys/param.h... yes
1314:info:configure checking for getpagesize... yes
1315:info:configure checking for working mmap... yes
1316:info:configure checking for malloc in -lmalloc... no
1317:info:configure checking for struct stat.st_blksize... yes
1318:info:configure checking malloc.h usability... no
1319:info:configure checking malloc.h presence... no
1320:info:configure checking for malloc.h... no
1321:info:configure checking uuid.h usability... no
1322:info:configure checking uuid.h presence... no
1323:info:configure checking for uuid.h... no
1324:info:configure checking uuid/uuid.h usability... yes
1325:info:configure checking uuid/uuid.h presence... yes
1326:info:configure checking for uuid/uuid.h... yes
1327:info:configure checking execinfo.h usability... yes
1328:info:configure checking execinfo.h presence... yes
1329:info:configure checking for execinfo.h... yes
1330:info:configure checking size parameter type for backtrace()... int
1331:info:configure checking for library containing backtrace... none required
1332:info:configure checking for mallinfo... no
1333:info:configure checking for getline... yes
1334:info:configure checking for uuid_generate in -luuid... yes
1335:info:configure checking whether uuid_generate is declared... yes
1336:info:configure checking whether isnan is declared... yes
1337:info:configure checking whether _SC_LARGE_PAGESIZE is declared... no
1338:info:configure checking whether PAGESIZE is declared... no
1339:info:configure checking whether PAGE_SIZE is declared... no
1340:info:configure checking whether _SC_PAGE_SIZE is declared... yes
1341:info:configure checking whether _SC_PAGESIZE is declared... yes
1342:info:configure checking whether _PC_REC_XFER_ALIGN is declared... yes
1343:info:configure checking whether POSIX_REC_XFER_ALIGN is declared... no
1344:info:configure checking whether __builtin_ctz is declared... yes
1345:info:configure checking for floor in -lm... yes
1346:info:configure checking if compiler needs -Werror to reject unknown flags... yes
1347:info:configure checking whether pthreads work with -pthread... yes
1348:info:configure checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE
1349:info:configure checking if more special flags are required for pthreads... -D_THREAD_SAFE
1350:info:configure checking for PTHREAD_PRIO_INHERIT... yes
1351:info:configure CC:/opt/local/bin/mpicc-openmpi-mp CFLAGS:-pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread LIBS: -lm
1352:info:configure checking for szlib library... suppressed
1353:info:configure checking netcdf.h usability... yes
1354:info:configure checking netcdf.h presence... yes
1355:info:configure checking for netcdf.h... yes
1356:info:configure checking for library containing nc_open... -lnetcdf
1357:info:configure checking nc-config script... checking for nc-config... /opt/local/bin/nc-config
1358:info:configure checking netcdf's OpenDAP support... yes
1359:info:configure checking netcdf's nc2 support... yes
1360:info:configure checking netcdf's nc4 support... yes
1361:info:configure checking netcdf's nc4/hdf5 support... yes
1362:info:configure checking for library containing H5TS_mutex_lock... no
1363:info:configure checking for library containing H5get_libversion... none required
1364:info:configure checking for the ECCODES library... suppressed
1365:info:configure checking for the GRIB_API library... suppressed
1366:info:configure checking for GRIB support... yes
1367:info:configure checking for CGRIBEX support... yes
1368:info:configure checking for SERVICE support... yes
1369:info:configure checking for EXTRA support... yes
1370:info:configure checking for IEG support... yes
1371:info:configure checking for building an additional static CDI binary... no
1372:info:configure checking for HIRLAM extensions... no
1373:info:configure checking for grib_get_length... no
1374:info:configure checking for pkg-config... /opt/local/bin/pkg-config
1375:info:configure checking pkg-config is at least version 0.9.0... yes
1376:info:configure checking for ruby... ruby
1377:info:configure checking C preprocessor flags for Fortran calling convention cfortran.h...  (probed)
1378:info:configure checking that generated files are newer than configure... done
1379:info:configure configure: creating ./config.status
1380:info:configure config.status: creating tests/test_cksum_grib
1381:info:configure config.status: creating tests/test_cksum_nc
1382:info:configure config.status: creating tests/test_cksum_nc2
1383:info:configure config.status: creating tests/test_cksum_nc4
1384:info:configure config.status: creating tests/test_cksum_extra
1385:info:configure config.status: creating tests/test_cksum_service
1386:info:configure config.status: creating tests/test_cksum_ieg
1387:info:configure config.status: creating tests/test_chunk_cksum
1388:info:configure config.status: creating tests/test_f2003
1389:info:configure config.status: creating tests/pio_write_run
1390:info:configure config.status: creating tests/pio_write_deco2d_run
1391:info:configure config.status: creating tests/pio_cksum_mpinonb
1392:info:configure config.status: creating tests/pio_cksum_mpi_fw_ordered
1393:info:configure config.status: creating tests/pio_cksum_mpi_fw_at_all
1394:info:configure config.status: creating tests/pio_cksum_mpi_fw_at_reblock
1395:info:configure config.status: creating tests/pio_cksum_fpguard
1396:info:configure config.status: creating tests/pio_cksum_asynch
1397:info:configure config.status: creating tests/pio_cksum_writer
1398:info:configure config.status: creating tests/pio_cksum_cdf
1399:info:configure config.status: creating tests/test_resource_copy_mpi_run
1400:info:configure config.status: creating tests/test_cdf_transformation
1401:info:configure config.status: creating tests/test_cdf_const
1402:info:configure config.status: creating tables/gen_tableheaderfile
1403:info:configure config.status: creating util/serialrun
1404:info:configure config.status: creating Makefile
1405:info:configure config.status: creating src/Makefile
1406:info:configure config.status: creating interfaces/Makefile
1407:info:configure config.status: creating app/Makefile
1408:info:configure config.status: creating tests/Makefile
1409:info:configure config.status: creating examples/Makefile
1410:info:configure config.status: creating cdi.settings
1411:info:configure config.status: creating examples/pio/Makefile
1412:info:configure config.status: creating src/pkgconfig/cdi.pc
1413:info:configure config.status: creating src/pkgconfig/cdipio.pc
1414:info:configure config.status: creating src/config.h
1415:info:configure config.status: executing depfiles commands
1416:info:configure config.status: executing libtool commands
1417:info:configure configure: CDI is configured with the following options:
1418:info:configure config.status: creating cdi.settings
1419:info:configure {
1420:info:configure   "build" : {
1421:info:configure     "tools" : {
1422:info:configure       "CC"       : "/opt/local/bin/mpicc-openmpi-mp",
1423:info:configure       "CPP"      : "/opt/local/bin/mpicc-openmpi-mp -E",
1424:info:configure       "CPPFLAGS" : "-I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 ",
1425:info:configure       "CFLAGS"   : "-pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread",
1426:info:configure       "LDFLAGS"  : "-L/opt/local/lib -L/opt/local/lib -Wl,-headerpad_max_install_names -lhdf5 -arch x86_64",
1427:info:configure       "LIBS"     : "-lnetcdf  -lm ",
1428:info:configure       "FC"       : "no",
1429:info:configure       "F77"      : "",
1430:info:configure       "FCFLAGS"  : "-pipe -Os -m64",
1431:info:configure       "LD"       : "/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld",
1432:info:configure       "NM"       : "/opt/local/bin/nm -B",
1433:info:configure       "AR"       : "ar",
1434:info:configure       "AS"       : "@AS@",
1435:info:configure       "DLLTOOL"  : "false",
1436:info:configure       "OBJDUMP"  : "objdump",
1437:info:configure       "STRIP"    : "strip",
1438:info:configure       "RANLIB"   : "ranlib",
1439:info:configure       "INSTALL"  : "/usr/bin/install -c"
1440:info:configure     },
1441:info:configure     "platform" : {
1442:info:configure       "USER_NAME"   : "root",
1443:info:configure       "HOST_NAME"   : "asosx146.nat.physics.ox.ac.uk",
1444:info:configure       "SYSTEM_TYPE" : "x86_64-apple-darwin16.7.0"
1445:info:configure     },
1446:info:configure     "libraries" : {
1447:info:configure       "threads"    : {
1448:info:configure         "lib"      : "",
1449:info:configure         "include"  : ""
1450:info:configure       },
1451:info:configure       "mpi"        : {
1452:info:configure         "libs"     : "",
1453:info:configure         "cflags"   : "",
1454:info:configure         "fclibs"   : "",
1455:info:configure         "fcflags"  : ""
1456:info:configure       },
1457:info:configure       "szlib"    : {
1458:info:configure         "lib"      : "",
1459:info:configure         "include"  : ""
1460:info:configure       },
1461:info:configure       "netcdf"   : {
1462:info:configure         "lib"      : " -L/opt/local/lib -lnetcdf",
1463:info:configure         "include"  : " -I/opt/local/include"
1464:info:configure       },
1465:info:configure       "grib_api" : {
1466:info:configure         "lib"      : "",
1467:info:configure         "include"  : ""
1468:info:configure       }
1469:info:configure       "eccodes" : {
1470:info:configure         "lib"      : "",
1471:info:configure         "include"  : ""
1472:info:configure       }
1473:info:configure     }
1474:info:configure   },
1475:info:configure   "features" : {
1476:info:configure     "enable_cdi_lib" : false,
1477:info:configure     "grib"           : "yes",
1478:info:configure     "cgribex"        : "yes",
1479:info:configure     "service"        : "yes",
1480:info:configure     "extra"          : "yes",
1481:info:configure     "ieg"            : "yes",
1482:info:configure     "enable_mpi"    : false,
1483:info:configure     "parallel_nc4"  : 0,
1484:info:configure     "enable_python" : false,
1485:info:configure     "enable_ruby"   : false
1486:info:configure   }
1487:info:configure }
1488:info:configure configure:
1489:info:configure   Configuration completed.
1490:info:configure     You can now say 'make' to compile the CDI package and 'make install' to install it afterwards.
1491:info:configure configure: CDO is configured with the following options:
1492:info:configure {
1493:info:configure    "CXX"                : "/usr/bin/clang++ -std=gnu++11",
1494:info:configure    "CC"                 : "/opt/local/bin/mpicc-openmpi-mp",
1495:info:configure    "CPP"                : "/opt/local/bin/mpicc-openmpi-mp -E",
1496:info:configure    "CPPFLAGS"           : "-I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2",
1497:info:configure    "CXXFLAGS"           : "-pipe -Os -stdlib=libc++ -arch x86_64  -D_THREAD_SAFE -pthread",
1498:info:configure    "CFLAGS"             : "-pipe -Os -arch x86_64  -D_THREAD_SAFE -pthread",
1499:info:configure    "LDFLAGS"            : "-L/opt/local/lib -L/opt/local/lib -L/opt/local/lib -L/opt/local/lib -L/opt/local/lib -Wl,-headerpad_max_install_names -lhdf5 -arch x86_64 -L/opt/local/lib",
1500:info:configure    "LIBS"               : "-lcurl -lproj -lfftw3 -ludunits2 -lnetcdf -lhdf5_hl  -lm ",
1501:info:configure    "FCFLAGS"            : "-pipe -Os -m64",
1502:info:configure    "INCLUDES"           : "@INCLUDES@",
1503:info:configure    "LD"                 : "/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld",
1504:info:configure    "NM"                 : "/opt/local/bin/nm -B",
1505:info:configure    "AR"                 : "ar",
1506:info:configure    "AS"                 : "as",
1507:info:configure    "DLLTOOL"            : "false",
1508:info:configure    "OBJDUMP"            : "objdump",
1509:info:configure    "STRIP"              : "strip",
1510:info:configure    "RANLIB"             : "ranlib",
1511:info:configure    "INSTALL"            : "/usr/bin/install -c",
1512:info:configure    "cdi"                : {
1513:info:configure      "enable_cdi_lib" : false
1514:info:configure    },
1515:info:configure   "threads"    : {
1516:info:configure     "lib"      : "",
1517:info:configure     "include"  : ""
1518:info:configure   "szlib"      : {
1519:info:configure     "lib"      : "",
1520:info:configure     "include"  : ""
1521:info:configure   },
1522:info:configure   "hdf5"       : {
1523:info:configure     "lib"      : " -L/opt/local/lib -lhdf5",
1524:info:configure     "include"  : " -I/opt/local/include"
1525:info:configure   },
1526:info:configure   "netcdf"     : {
1527:info:configure     "lib"      : " -L/opt/local/lib -lnetcdf",
1528:info:configure     "include"  : " -I/opt/local/include"
1529:info:configure   },
1530:info:configure   "udunits2"   : {
1531:info:configure     "lib"      : " -L/opt/local/lib -ludunits2",
1532:info:configure     "include"  : " -I/opt/local/include"
1533:info:configure   },
1534:info:configure   "proj"       : {
1535:info:configure     "lib"      : " -L/opt/local/lib -lproj",
1536:info:configure     "include"  : " -I/opt/local/include"
1537:info:configure   },
1538:info:configure   "magics"       : {
1539:info:configure     "lib"      : "",
1540:info:configure     "include"  : ""
1541:info:configure   },
1542:info:configure   "USER_NAME"          : "root",
1543:info:configure   "HOST_NAME"          : "asosx146.nat.physics.ox.ac.uk",
1544:info:configure   "SYSTEM_TYPE"        : "x86_64-apple-darwin16.7.0"
1545:info:configure }
1546:info:configure configure:
1547:info:configure   Configuration completed.
1548:info:configure     You can now say 'make' to compile the CDO package and 'make install' to install it afterwards.
1549:debug:configure Privilege de-escalation not attempted as not running as root.
1550:debug:build build phase started at Tue Sep  5 19:16:25 BST 2017
1551:notice:build --->  Building cdo
1552:debug:build Executing org.macports.build (cdo)
1553:debug:build Environment:
1554:debug:build CC_PRINT_OPTIONS='YES'
1555:debug:build CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/.CC_PRINT_OPTIONS'
1556:debug:build CPATH='/opt/local/include'
1557:debug:build LIBRARY_PATH='/opt/local/lib'
1558:debug:build MACOSX_DEPLOYMENT_TARGET='10.12'
1559:info:build Executing:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.0" && /usr/bin/make -j8 -w all
1560:debug:build system:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.0" && /usr/bin/make -j8 -w all
1561:info:build make: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.0'
1562:info:build Making all in libcdi
1563:info:build make[1]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.0/libcdi'
1564:info:build Making all in src
1565:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.0/libcdi/src'
1566:info:build /Applications/Xcode.app/Contents/Developer/usr/bin/make  all-am
1567:info:build make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.0/libcdi/src'
1568:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o resource_unpack.lo resource_unpack.c
1569:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o basetime.lo basetime.c
1570:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o binary.lo binary.c
1571:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o calendar.lo calendar.c
1572:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o cdf.lo cdf.c
1573:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o cdf_int.lo cdf_int.c
1574:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o cdf_util.lo cdf_util.c
1575:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o cdi_error.lo cdi_error.c
1576:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c resource_unpack.c  -fno-common -DPIC -o .libs/resource_unpack.o
1577:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cdf_util.c  -fno-common -DPIC -o .libs/cdf_util.o
1578:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c calendar.c  -fno-common -DPIC -o .libs/calendar.o
1579:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c basetime.c  -fno-common -DPIC -o .libs/basetime.o
1580:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c binary.c  -fno-common -DPIC -o .libs/binary.o
1581:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cdf_int.c  -fno-common -DPIC -o .libs/cdf_int.o
1582:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cdf.c  -fno-common -DPIC -o .libs/cdf.o
1583:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cdi_error.c  -fno-common -DPIC -o .libs/cdi_error.o
1584:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cdi_error.c -o cdi_error.o >/dev/null 2>&1
1585:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c basetime.c -o basetime.o >/dev/null 2>&1
1586:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c binary.c -o binary.o >/dev/null 2>&1
1587:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c resource_unpack.c -o resource_unpack.o >/dev/null 2>&1
1588:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c calendar.c -o calendar.o >/dev/null 2>&1
1589:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cdf.c -o cdf.o >/dev/null 2>&1
1590:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cdf_util.c -o cdf_util.o >/dev/null 2>&1
1591:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o cdi_util.lo cdi_util.c
1592:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o cgribexlib.lo cgribexlib.c
1593:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cdi_util.c  -fno-common -DPIC -o .libs/cdi_util.o
1594:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cgribexlib.c  -fno-common -DPIC -o .libs/cgribexlib.o
1595:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o dmemory.lo dmemory.c
1596:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o cksum.lo cksum.c
1597:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o cdi_cksum.lo cdi_cksum.c
1598:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o error.lo error.c
1599:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c dmemory.c  -fno-common -DPIC -o .libs/dmemory.o
1600:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cksum.c  -fno-common -DPIC -o .libs/cksum.o
1601:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cdf_int.c -o cdf_int.o >/dev/null 2>&1
1602:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cdi_cksum.c  -fno-common -DPIC -o .libs/cdi_cksum.o
1603:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c error.c  -fno-common -DPIC -o .libs/error.o
1604:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cdi_util.c -o cdi_util.o >/dev/null 2>&1
1605:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o extralib.lo extralib.c
1606:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cdi_cksum.c -o cdi_cksum.o >/dev/null 2>&1
1607:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c extralib.c  -fno-common -DPIC -o .libs/extralib.o
1608:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cksum.c -o cksum.o >/dev/null 2>&1
1609:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c error.c -o error.o >/dev/null 2>&1
1610:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o file.lo file.c
1611:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c dmemory.c -o dmemory.o >/dev/null 2>&1
1612:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o gaussgrid.lo gaussgrid.c
1613:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o gribapi.lo gribapi.c
1614:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c file.c  -fno-common -DPIC -o .libs/file.o
1615:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o grid.lo grid.c
1616:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c gaussgrid.c  -fno-common -DPIC -o .libs/gaussgrid.o
1617:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c gribapi.c  -fno-common -DPIC -o .libs/gribapi.o
1618:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c grid.c  -fno-common -DPIC -o .libs/grid.o
1619:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c extralib.c -o extralib.o >/dev/null 2>&1
1620:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o ieglib.lo ieglib.c
1621:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c gribapi.c -o gribapi.o >/dev/null 2>&1
1622:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o input_file.lo input_file.c
1623:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c ieglib.c  -fno-common -DPIC -o .libs/ieglib.o
1624:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c input_file.c  -fno-common -DPIC -o .libs/input_file.o
1625:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c gaussgrid.c -o gaussgrid.o >/dev/null 2>&1
1626:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o institution.lo institution.c
1627:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o model.lo model.c
1628:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c file.c -o file.o >/dev/null 2>&1
1629:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c institution.c  -fno-common -DPIC -o .libs/institution.o
1630:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c input_file.c -o input_file.o >/dev/null 2>&1
1631:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c model.c  -fno-common -DPIC -o .libs/model.o
1632:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c ieglib.c -o ieglib.o >/dev/null 2>&1
1633:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o namespace.lo namespace.c
1634:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o serialize.lo serialize.c
1635:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c institution.c -o institution.o >/dev/null 2>&1
1636:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c namespace.c  -fno-common -DPIC -o .libs/namespace.o
1637:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c model.c -o model.o >/dev/null 2>&1
1638:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c serialize.c  -fno-common -DPIC -o .libs/serialize.o
1639:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c serialize.c -o serialize.o >/dev/null 2>&1
1640:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o referenceCounting.lo referenceCounting.c
1641:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o resource_handle.lo resource_handle.c
1642:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c namespace.c -o namespace.o >/dev/null 2>&1
1643:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o servicelib.lo servicelib.c
1644:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c referenceCounting.c  -fno-common -DPIC -o .libs/referenceCounting.o
1645:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c resource_handle.c  -fno-common -DPIC -o .libs/resource_handle.o
1646:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c servicelib.c  -fno-common -DPIC -o .libs/servicelib.o
1647:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c referenceCounting.c -o referenceCounting.o >/dev/null 2>&1
1648:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o stream_cdf_i.lo stream_cdf_i.c
1649:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o stream_cdf_o.lo stream_cdf_o.c
1650:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o stream_cdf_time.lo stream_cdf_time.c
1651:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_cdf_time.c  -fno-common -DPIC -o .libs/stream_cdf_time.o
1652:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_cdf_o.c  -fno-common -DPIC -o .libs/stream_cdf_o.o
1653:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_cdf_i.c  -fno-common -DPIC -o .libs/stream_cdf_i.o
1654:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o stream_cgribex.lo stream_cgribex.c
1655:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_cgribex.c  -fno-common -DPIC -o .libs/stream_cgribex.o
1656:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_cdf_time.c -o stream_cdf_time.o >/dev/null 2>&1
1657:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c servicelib.c -o servicelib.o >/dev/null 2>&1
1658:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c resource_handle.c -o resource_handle.o >/dev/null 2>&1
1659:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o stream_ext.lo stream_ext.c
1660:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_ext.c  -fno-common -DPIC -o .libs/stream_ext.o
1661:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o stream_grb.lo stream_grb.c
1662:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_grb.c  -fno-common -DPIC -o .libs/stream_grb.o
1663:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c grid.c -o grid.o >/dev/null 2>&1
1664:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_grb.c -o stream_grb.o >/dev/null 2>&1
1665:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o stream_history.lo stream_history.c
1666:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_history.c  -fno-common -DPIC -o .libs/stream_history.o
1667:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_ext.c -o stream_ext.o >/dev/null 2>&1
1668:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o stream_ieg.lo stream_ieg.c
1669:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_cdf_o.c -o stream_cdf_o.o >/dev/null 2>&1
1670:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_ieg.c  -fno-common -DPIC -o .libs/stream_ieg.o
1671:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_history.c -o stream_history.o >/dev/null 2>&1
1672:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o cdi_int.lo cdi_int.c
1673:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_cgribex.c -o stream_cgribex.o >/dev/null 2>&1
1674:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cdi_int.c  -fno-common -DPIC -o .libs/cdi_int.o
1675:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o stream_record.lo stream_record.c
1676:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cdi_int.c -o cdi_int.o >/dev/null 2>&1
1677:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_record.c  -fno-common -DPIC -o .libs/stream_record.o
1678:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_ieg.c -o stream_ieg.o >/dev/null 2>&1
1679:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o stream_srv.lo stream_srv.c
1680:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_record.c -o stream_record.o >/dev/null 2>&1
1681:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_srv.c  -fno-common -DPIC -o .libs/stream_srv.o
1682:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o stream_var.lo stream_var.c
1683:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_var.c  -fno-common -DPIC -o .libs/stream_var.o
1684:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o grb_write.lo grb_write.c
1685:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c grb_write.c  -fno-common -DPIC -o .libs/grb_write.o
1686:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_var.c -o stream_var.o >/dev/null 2>&1
1687:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_srv.c -o stream_srv.o >/dev/null 2>&1
1688:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c grb_write.c -o grb_write.o >/dev/null 2>&1
1689:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o grb_read.lo grb_read.c
1690:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o cdf_write.lo cdf_write.c
1691:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o cdf_read.lo cdf_read.c
1692:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c grb_read.c  -fno-common -DPIC -o .libs/grb_read.o
1693:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cdf_write.c  -fno-common -DPIC -o .libs/cdf_write.o
1694:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cdf_read.c  -fno-common -DPIC -o .libs/cdf_read.o
1695:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o cdf_lazy_grid.lo cdf_lazy_grid.c
1696:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o subtype.lo subtype.c
1697:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cdf_lazy_grid.c  -fno-common -DPIC -o .libs/cdf_lazy_grid.o
1698:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c subtype.c  -fno-common -DPIC -o .libs/subtype.o
1699:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c grb_read.c -o grb_read.o >/dev/null 2>&1
1700:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o table.lo table.c
1701:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c table.c  -fno-common -DPIC -o .libs/table.o
1702:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o taxis.lo taxis.c
1703:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cdf_lazy_grid.c -o cdf_lazy_grid.o >/dev/null 2>&1
1704:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c taxis.c  -fno-common -DPIC -o .libs/taxis.o
1705:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c subtype.c -o subtype.o >/dev/null 2>&1
1706:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_cdf_i.c -o stream_cdf_i.o >/dev/null 2>&1
1707:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cdf_read.c -o cdf_read.o >/dev/null 2>&1
1708:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o timebase.lo timebase.c
1709:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cdf_write.c -o cdf_write.o >/dev/null 2>&1
1710:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c timebase.c  -fno-common -DPIC -o .libs/timebase.o
1711:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c timebase.c -o timebase.o >/dev/null 2>&1
1712:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c taxis.c -o taxis.o >/dev/null 2>&1
1713:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o tsteps.lo tsteps.c
1714:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c table.c -o table.o >/dev/null 2>&1
1715:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c tsteps.c  -fno-common -DPIC -o .libs/tsteps.o
1716:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o util.lo util.c
1717:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c util.c  -fno-common -DPIC -o .libs/util.o
1718:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cgribexlib.c -o cgribexlib.o >/dev/null 2>&1
1719:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c tsteps.c -o tsteps.o >/dev/null 2>&1
1720:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c util.c -o util.o >/dev/null 2>&1
1721:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o varscan.lo varscan.c
1722:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o version.lo version.c
1723:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c varscan.c  -fno-common -DPIC -o .libs/varscan.o
1724:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o vlist.lo vlist.c
1725:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o cdi_att.lo cdi_att.c
1726:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c version.c  -fno-common -DPIC -o .libs/version.o
1727:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c vlist.c  -fno-common -DPIC -o .libs/vlist.o
1728:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o vlist_var.lo vlist_var.c
1729:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cdi_att.c  -fno-common -DPIC -o .libs/cdi_att.o
1730:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c version.c -o version.o >/dev/null 2>&1
1731:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c vlist_var.c  -fno-common -DPIC -o .libs/vlist_var.o
1732:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o zaxis.lo zaxis.c
1733:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o stream.lo stream.c
1734:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c zaxis.c  -fno-common -DPIC -o .libs/zaxis.o
1735:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream.c  -fno-common -DPIC -o .libs/stream.o
1736:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cdi_att.c -o cdi_att.o >/dev/null 2>&1
1737:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o stream_write.lo stream_write.c
1738:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c varscan.c -o varscan.o >/dev/null 2>&1
1739:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_write.c  -fno-common -DPIC -o .libs/stream_write.o
1740:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream.c -o stream.o >/dev/null 2>&1
1741:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c vlist_var.c -o vlist_var.o >/dev/null 2>&1
1742:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_write.c -o stream_write.o >/dev/null 2>&1
1743:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c vlist.c -o vlist.o >/dev/null 2>&1
1744:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c zaxis.c -o zaxis.o >/dev/null 2>&1
1745:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o stream_read.lo stream_read.c
1746:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_read.c  -fno-common -DPIC -o .libs/stream_read.o
1747:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o swap.lo swap.c
1748:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c swap.c  -fno-common -DPIC -o .libs/swap.o
1749:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c swap.c -o swap.o >/dev/null 2>&1
1750:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o iterator.lo iterator.c
1751:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_read.c -o stream_read.o >/dev/null 2>&1
1752:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c iterator.c  -fno-common -DPIC -o .libs/iterator.o
1753:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o iterator_fallback.lo iterator_fallback.c
1754:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c iterator_fallback.c  -fno-common -DPIC -o .libs/iterator_fallback.o
1755:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c iterator.c -o iterator.o >/dev/null 2>&1
1756:info:build /bin/sh ../libtool  --tag=CC   --mode=compile /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I.   -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2     -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o iterator_grib.lo iterator_grib.c
1757:info:build /bin/sh ../libtool  --tag=CC   --mode=link /opt/local/bin/mpicc-openmpi-mp    -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread  -L/opt/local/lib -L/opt/local/lib -Wl,-headerpad_max_install_names -lhdf5 -arch x86_64 -o libcdiresunpack.la  resource_unpack.lo  -lnetcdf  -lm
1758:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c iterator_fallback.c -o iterator_fallback.o >/dev/null 2>&1
1759:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c iterator_grib.c  -fno-common -DPIC -o .libs/iterator_grib.o
1760:info:build libtool: link: ar cru .libs/libcdiresunpack.a .libs/resource_unpack.o
1761:info:build libtool: compile:  /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c iterator_grib.c -o iterator_grib.o >/dev/null 2>&1
1762:info:build libtool: link: ranlib .libs/libcdiresunpack.a
1763:info:build libtool: link: ( cd ".libs" && rm -f "libcdiresunpack.la" && ln -s "../libcdiresunpack.la" "libcdiresunpack.la" )
1764:info:build /bin/sh ../libtool  --tag=CC   --mode=link /opt/local/bin/mpicc-openmpi-mp    -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread  -L/opt/local/lib -L/opt/local/lib -Wl,-headerpad_max_install_names -lhdf5 -arch x86_64 -o libcdi.la  basetime.lo binary.lo calendar.lo cdf.lo cdf_int.lo cdf_util.lo cdi_error.lo cdi_util.lo cgribexlib.lo dmemory.lo cksum.lo cdi_cksum.lo error.lo extralib.lo file.lo gaussgrid.lo gribapi.lo grid.lo ieglib.lo input_file.lo institution.lo model.lo namespace.lo serialize.lo referenceCounting.lo resource_handle.lo servicelib.lo stream_cdf_i.lo stream_cdf_o.lo stream_cdf_time.lo stream_cgribex.lo stream_ext.lo stream_grb.lo stream_history.lo stream_ieg.lo cdi_int.lo stream_record.lo stream_srv.lo stream_var.lo grb_write.lo grb_read.lo cdf_write.lo cdf_read.lo cdf_lazy_grid.lo subtype.lo table.lo taxis.lo timebase.lo tsteps.lo util.lo varscan.lo version.lo vlist.lo cdi_att.lo vlist_var.lo zaxis.lo stream.lo stream_write.lo stream_read.lo swap.lo iterator.lo iterator_fallback.lo iterator_grib.lo   -luuid -lnetcdf  -lm
1765:info:build libtool: link: ar cru .libs/libcdi.a .libs/basetime.o .libs/binary.o .libs/calendar.o .libs/cdf.o .libs/cdf_int.o .libs/cdf_util.o .libs/cdi_error.o .libs/cdi_util.o .libs/cgribexlib.o .libs/dmemory.o .libs/cksum.o .libs/cdi_cksum.o .libs/error.o .libs/extralib.o .libs/file.o .libs/gaussgrid.o .libs/gribapi.o .libs/grid.o .libs/ieglib.o .libs/input_file.o .libs/institution.o .libs/model.o .libs/namespace.o .libs/serialize.o .libs/referenceCounting.o .libs/resource_handle.o .libs/servicelib.o .libs/stream_cdf_i.o .libs/stream_cdf_o.o .libs/stream_cdf_time.o .libs/stream_cgribex.o .libs/stream_ext.o .libs/stream_grb.o .libs/stream_history.o .libs/stream_ieg.o .libs/cdi_int.o .libs/stream_record.o .libs/stream_srv.o .libs/stream_var.o .libs/grb_write.o .libs/grb_read.o .libs/cdf_write.o .libs/cdf_read.o .libs/cdf_lazy_grid.o .libs/subtype.o .libs/table.o .libs/taxis.o .libs/timebase.o .libs/tsteps.o .libs/util.o .libs/varscan.o .libs/version.o .libs/vlist.o .libs/cdi_att.o .libs/vlist_var.o .libs/zaxis.o .libs/stream.o .libs/stream_write.o .libs/stream_read.o .libs/swap.o .libs/iterator.o .libs/iterator_fallback.o .libs/iterator_grib.o
1766:info:build libtool: link: ranlib .libs/libcdi.a
1767:info:build libtool: link: ( cd ".libs" && rm -f "libcdi.la" && ln -s "../libcdi.la" "libcdi.la" )
1768:info:build make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.0/libcdi/src'
1769:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.0/libcdi/src'
1770:info:build Making all in interfaces
1771:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.0/libcdi/interfaces'
1772:info:build make[2]: Nothing to be done for `all'.
1773:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.0/libcdi/interfaces'
1774:info:build Making all in app
1775:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.0/libcdi/app'
1776:info:build /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I../src  -I../src -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2   -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o cdi.o cdi.c
1777:info:build /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I../src  -I../src -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2   -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o createtable.o createtable.c
1778:info:build /bin/sh ../libtool  --tag=CC   --mode=link /opt/local/bin/mpicc-openmpi-mp  -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread  -L/opt/local/lib -L/opt/local/lib -Wl,-headerpad_max_install_names -lhdf5 -arch x86_64 -o createtable createtable.o ../src/libcdi.la -lnetcdf  -lm
1779:info:build libtool: link: /opt/local/bin/mpicc-openmpi-mp -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -Wl,-headerpad_max_install_names -arch x86_64 -o createtable createtable.o  -L/opt/local/lib ../src/.libs/libcdi.a -lhdf5 -luuid -lnetcdf -lm -pthread
1780:info:build clang: warning: argument unused during compilation: '-pthread' [-Wunused-command-line-argument]
1781:info:build clang: warning: argument unused during compilation: '-pthread' [-Wunused-command-line-argument]
1782:info:build /bin/sh ../libtool  --tag=CC   --mode=link /opt/local/bin/mpicc-openmpi-mp  -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread  -L/opt/local/lib -L/opt/local/lib -Wl,-headerpad_max_install_names -lhdf5 -arch x86_64 -o cdi cdi.o ../src/libcdi.la -lnetcdf  -lm  -lnetcdf  -lm
1783:info:build libtool: link: /opt/local/bin/mpicc-openmpi-mp -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -Wl,-headerpad_max_install_names -arch x86_64 -o cdi cdi.o  -L/opt/local/lib ../src/.libs/libcdi.a -lhdf5 -luuid -lnetcdf -lm -pthread
1784:info:build clang: warning: argument unused during compilation: '-pthread' [-Wunused-command-line-argument]
1785:info:build clang: warning: argument unused during compilation: '-pthread' [-Wunused-command-line-argument]
1786:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.0/libcdi/app'
1787:info:build Making all in examples
1788:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.0/libcdi/examples'
1789:info:build /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I../src  -I../src -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2   -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o cdi_write.o cdi_write.c
1790:info:build /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I../src  -I../src -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2   -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o cdi_write_ens.o cdi_write_ens.c
1791:info:build /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I../src  -I../src -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2   -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o cdi_write_hybrid.o cdi_write_hybrid.c
1792:info:build /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I../src  -I../src -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2   -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o cdi_read.o cdi_read.c
1793:info:build /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I../src  -I../src -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2   -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o cdi_copy.o cdi_copy.c
1794:info:build /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I../src  -I../src -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2   -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o cdi_write_const.o cdi_write_const.c
1795:info:build /bin/sh ../libtool  --tag=CC   --mode=link /opt/local/bin/mpicc-openmpi-mp  -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread  -L/opt/local/lib -L/opt/local/lib -Wl,-headerpad_max_install_names -lhdf5 -arch x86_64 -o cdi_copy cdi_copy.o ../src/libcdi.la -lnetcdf  -lm
1796:info:build /bin/sh ../libtool  --tag=CC   --mode=link /opt/local/bin/mpicc-openmpi-mp  -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread  -L/opt/local/lib -L/opt/local/lib -Wl,-headerpad_max_install_names -lhdf5 -arch x86_64 -o cdi_read cdi_read.o ../src/libcdi.la -lnetcdf  -lm
1797:info:build /bin/sh ../libtool  --tag=CC   --mode=link /opt/local/bin/mpicc-openmpi-mp  -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread  -L/opt/local/lib -L/opt/local/lib -Wl,-headerpad_max_install_names -lhdf5 -arch x86_64 -o cdi_write cdi_write.o ../src/libcdi.la -lnetcdf  -lm
1798:info:build /bin/sh ../libtool  --tag=CC   --mode=link /opt/local/bin/mpicc-openmpi-mp  -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread  -L/opt/local/lib -L/opt/local/lib -Wl,-headerpad_max_install_names -lhdf5 -arch x86_64 -o cdi_write_ens cdi_write_ens.o ../src/libcdi.la -lnetcdf  -lm
1799:info:build /bin/sh ../libtool  --tag=CC   --mode=link /opt/local/bin/mpicc-openmpi-mp  -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread  -L/opt/local/lib -L/opt/local/lib -Wl,-headerpad_max_install_names -lhdf5 -arch x86_64 -o cdi_write_const cdi_write_const.o ../src/libcdi.la -lnetcdf  -lm
1800:info:build /bin/sh ../libtool  --tag=CC   --mode=link /opt/local/bin/mpicc-openmpi-mp  -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread  -L/opt/local/lib -L/opt/local/lib -Wl,-headerpad_max_install_names -lhdf5 -arch x86_64 -o cdi_write_hybrid cdi_write_hybrid.o ../src/libcdi.la -lnetcdf  -lm
1801:info:build libtool: link: /opt/local/bin/mpicc-openmpi-mp -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -Wl,-headerpad_max_install_names -arch x86_64 -o cdi_read cdi_read.o  -L/opt/local/lib ../src/.libs/libcdi.a -lhdf5 -luuid -lnetcdf -lm -pthread
1802:info:build libtool: link: /opt/local/bin/mpicc-openmpi-mp -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -Wl,-headerpad_max_install_names -arch x86_64 -o cdi_write cdi_write.o  -L/opt/local/lib ../src/.libs/libcdi.a -lhdf5 -luuid -lnetcdf -lm -pthread
1803:info:build libtool: link: /opt/local/bin/mpicc-openmpi-mp -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -Wl,-headerpad_max_install_names -arch x86_64 -o cdi_copy cdi_copy.o  -L/opt/local/lib ../src/.libs/libcdi.a -lhdf5 -luuid -lnetcdf -lm -pthread
1804:info:build libtool: link: /opt/local/bin/mpicc-openmpi-mp -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -Wl,-headerpad_max_install_names -arch x86_64 -o cdi_write_ens cdi_write_ens.o  -L/opt/local/lib ../src/.libs/libcdi.a -lhdf5 -luuid -lnetcdf -lm -pthread
1805:info:build libtool: link: /opt/local/bin/mpicc-openmpi-mp -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -Wl,-headerpad_max_install_names -arch x86_64 -o cdi_write_const cdi_write_const.o  -L/opt/local/lib ../src/.libs/libcdi.a -lhdf5 -luuid -lnetcdf -lm -pthread
1806:info:build clang: warning: argument unused during compilation: '-pthread' [-Wunused-command-line-argument]
1807:info:build clang: warning: argument unused during compilation: '-pthread' [-Wunused-command-line-argument]
1808:info:build clang: warning: argument unused during compilation: '-pthread' [-Wunused-command-line-argument]
1809:info:build clang: warning: argument unused during compilation: '-pthread' [-Wunused-command-line-argument]
1810:info:build clang: warning: argument unused during compilation: '-pthread' [-Wunused-command-line-argument]
1811:info:build clang: warning: argument unused during compilation: '-pthread' [-Wunused-command-line-argument]
1812:info:build clang: warning: argument unused during compilation: '-pthread' [-Wunused-command-line-argument]
1813:info:build clang: warning: argument unused during compilation: '-pthread' [-Wunused-command-line-argument]
1814:info:build clang: warning: argument unused during compilation: '-pthread' [-Wunused-command-line-argument]
1815:info:build clang: warning: argument unused during compilation: '-pthread' [-Wunused-command-line-argument]
1816:info:build libtool: link: /opt/local/bin/mpicc-openmpi-mp -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -Wl,-headerpad_max_install_names -arch x86_64 -o cdi_write_hybrid cdi_write_hybrid.o  -L/opt/local/lib ../src/.libs/libcdi.a -lhdf5 -luuid -lnetcdf -lm -pthread
1817:info:build clang: warning: argument unused during compilation: '-pthread' [-Wunused-command-line-argument]
1818:info:build clang: warning: argument unused during compilation: '-pthread' [-Wunused-command-line-argument]
1819:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.0/libcdi/examples'
1820:info:build Making all in examples/pio
1821:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.0/libcdi/examples/pio'
1822:info:build /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I../../src  -I../../src  -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2   -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o collectData.o collectData.c
1823:info:build /opt/local/bin/mpicc-openmpi-mp -DHAVE_CONFIG_H -I. -I../../src  -I../../src  -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2   -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o collectDataNStreams.o collectDataNStreams.c
1824:info:build /bin/sh ../../libtool  --tag=CC   --mode=link /opt/local/bin/mpicc-openmpi-mp  -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread  -L/opt/local/lib -L/opt/local/lib -Wl,-headerpad_max_install_names -lhdf5 -arch x86_64 -o collectData collectData.o ../../src/libcdi.la -lnetcdf  -lm
1825:info:build /bin/sh ../../libtool  --tag=CC   --mode=link /opt/local/bin/mpicc-openmpi-mp  -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread  -L/opt/local/lib -L/opt/local/lib -Wl,-headerpad_max_install_names -lhdf5 -arch x86_64 -o collectDataNStreams collectDataNStreams.o ../../src/libcdi.la -lnetcdf  -lm
1826:info:build libtool: link: /opt/local/bin/mpicc-openmpi-mp -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -Wl,-headerpad_max_install_names -arch x86_64 -o collectData collectData.o  -L/opt/local/lib ../../src/.libs/libcdi.a -lhdf5 -luuid -lnetcdf -lm -pthread
1827:info:build clang: warning: argument unused during compilation: '-pthread' [-Wunused-command-line-argument]
1828:info:build clang: warning: argument unused during compilation: '-pthread' [-Wunused-command-line-argument]
1829:info:build libtool: link: /opt/local/bin/mpicc-openmpi-mp -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -Wl,-headerpad_max_install_names -arch x86_64 -o collectDataNStreams collectDataNStreams.o  -L/opt/local/lib ../../src/.libs/libcdi.a -lhdf5 -luuid -lnetcdf -lm -pthread
1830:info:build clang: warning: argument unused during compilation: '-pthread' [-Wunused-command-line-argument]
1831:info:build clang: warning: argument unused during compilation: '-pthread' [-Wunused-command-line-argument]
1832:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.0/libcdi/examples/pio'
1833:info:build Making all in tests
1834:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.0/libcdi/tests'
1835:info:build make[2]: Nothing to be done for `all'.
1836:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.0/libcdi/tests'
1837:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.0/libcdi'
1838:info:build make[2]: Nothing to be done for `all-am'.
1839:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.0/libcdi'
1840:info:build make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.0/libcdi'
1841:info:build Making all in src
1842:info:build make[1]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.0/src'
1843:info:build /Applications/Xcode.app/Contents/Developer/usr/bin/make  all-am
1844:info:build make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.0/src'
1845:info:build /bin/sh ../libtool  --tag=CXX   --mode=compile /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2  -pipe -Os -stdlib=libc++ -arch x86_64  -D_THREAD_SAFE -pthread -c -o libcdo_la-argument.lo `test -f 'argument.cc' || echo './'`argument.cc
1846:info:build /bin/sh ../libtool  --tag=CXX   --mode=compile /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2  -pipe -Os -stdlib=libc++ -arch x86_64  -D_THREAD_SAFE -pthread -c -o libcdo_la-array.lo `test -f 'array.cc' || echo './'`array.cc
1847:info:build /bin/sh ../libtool  --tag=CXX   --mode=compile /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2  -pipe -Os -stdlib=libc++ -arch x86_64  -D_THREAD_SAFE -pthread -c -o libcdo_la-cdo_pthread.lo `test -f 'cdo_pthread.cc' || echo './'`cdo_pthread.cc
1848:info:build /bin/sh ../libtool  --tag=CXX   --mode=compile /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2  -pipe -Os -stdlib=libc++ -arch x86_64  -D_THREAD_SAFE -pthread -c -o libcdo_la-cdo_vlist.lo `test -f 'cdo_vlist.cc' || echo './'`cdo_vlist.cc
1849:info:build /bin/sh ../libtool  --tag=CXX   --mode=compile /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2  -pipe -Os -stdlib=libc++ -arch x86_64  -D_THREAD_SAFE -pthread -c -o libcdo_la-cdo_getopt.lo `test -f 'cdo_getopt.cc' || echo './'`cdo_getopt.cc
1850:info:build /bin/sh ../libtool  --tag=CXX   --mode=compile /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2  -pipe -Os -stdlib=libc++ -arch x86_64  -D_THREAD_SAFE -pthread -c -o libcdo_la-cdo_task.lo `test -f 'cdo_task.cc' || echo './'`cdo_task.cc
1851:info:build /bin/sh ../libtool  --tag=CXX   --mode=compile /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2  -pipe -Os -stdlib=libc++ -arch x86_64  -D_THREAD_SAFE -pthread -c -o libcdo_la-cdo_history.lo `test -f 'cdo_history.cc' || echo './'`cdo_history.cc
1852:info:build /bin/sh ../libtool  --tag=CXX   --mode=compile /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2  -pipe -Os -stdlib=libc++ -arch x86_64  -D_THREAD_SAFE -pthread -c -o libcdo_la-cdo_read.lo `test -f 'cdo_read.cc' || echo './'`cdo_read.cc
1853:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c argument.cc  -fno-common -DPIC -o .libs/libcdo_la-argument.o
1854:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c cdo_getopt.cc  -fno-common -DPIC -o .libs/libcdo_la-cdo_getopt.o
1855:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c cdo_pthread.cc  -fno-common -DPIC -o .libs/libcdo_la-cdo_pthread.o
1856:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c cdo_task.cc  -fno-common -DPIC -o .libs/libcdo_la-cdo_task.o
1857:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c cdo_history.cc  -fno-common -DPIC -o .libs/libcdo_la-cdo_history.o
1858:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c array.cc  -fno-common -DPIC -o .libs/libcdo_la-array.o
1859:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c cdo_read.cc  -fno-common -DPIC -o .libs/libcdo_la-cdo_read.o
1860:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c cdo_vlist.cc  -fno-common -DPIC -o .libs/libcdo_la-cdo_vlist.o
1861:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c cdo_pthread.cc -o libcdo_la-cdo_pthread.o >/dev/null 2>&1
1862:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c cdo_task.cc -o libcdo_la-cdo_task.o >/dev/null 2>&1
1863:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c array.cc -o libcdo_la-array.o >/dev/null 2>&1
1864:info:build /bin/sh ../libtool  --tag=CXX   --mode=compile /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2  -pipe -Os -stdlib=libc++ -arch x86_64  -D_THREAD_SAFE -pthread -c -o libcdo_la-cmortable_parser.lo `test -f 'cmortable_parser.cc' || echo './'`cmortable_parser.cc
1865:info:build /bin/sh ../libtool  --tag=CXX   --mode=compile /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2  -pipe -Os -stdlib=libc++ -arch x86_64  -D_THREAD_SAFE -pthread -c -o libcdo_la-after_sptrans.lo `test -f 'after_sptrans.cc' || echo './'`after_sptrans.cc
1866:info:build /bin/sh ../libtool  --tag=CXX   --mode=compile /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2  -pipe -Os -stdlib=libc++ -arch x86_64  -D_THREAD_SAFE -pthread -c -o libcdo_la-after_fctrans.lo `test -f 'after_fctrans.cc' || echo './'`after_fctrans.cc
1867:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c cmortable_parser.cc  -fno-common -DPIC -o .libs/libcdo_la-cmortable_parser.o
1868:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c after_sptrans.cc  -fno-common -DPIC -o .libs/libcdo_la-after_sptrans.o
1869:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c after_fctrans.cc  -fno-common -DPIC -o .libs/libcdo_la-after_fctrans.o
1870:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c cdo_getopt.cc -o libcdo_la-cdo_getopt.o >/dev/null 2>&1
1871:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c cdo_history.cc -o libcdo_la-cdo_history.o >/dev/null 2>&1
1872:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c cdo_read.cc -o libcdo_la-cdo_read.o >/dev/null 2>&1
1873:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c cdo_vlist.cc -o libcdo_la-cdo_vlist.o >/dev/null 2>&1
1874:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c argument.cc -o libcdo_la-argument.o >/dev/null 2>&1
1875:info:build /bin/sh ../libtool  --tag=CXX   --mode=compile /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2  -pipe -Os -stdlib=libc++ -arch x86_64  -D_THREAD_SAFE -pthread -c -o libcdo_la-after_dvtrans.lo `test -f 'after_dvtrans.cc' || echo './'`after_dvtrans.cc
1876:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c cmortable_parser.cc -o libcdo_la-cmortable_parser.o >/dev/null 2>&1
1877:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c after_sptrans.cc -o libcdo_la-after_sptrans.o >/dev/null 2>&1
1878:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c after_dvtrans.cc  -fno-common -DPIC -o .libs/libcdo_la-after_dvtrans.o
1879:info:build /bin/sh ../libtool  --tag=CXX   --mode=compile /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2  -pipe -Os -stdlib=libc++ -arch x86_64  -D_THREAD_SAFE -pthread -c -o libcdo_la-after_vertint.lo `test -f 'after_vertint.cc' || echo './'`after_vertint.cc
1880:info:build /bin/sh ../libtool  --tag=CXX   --mode=compile /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2  -pipe -Os -stdlib=libc++ -arch x86_64  -D_THREAD_SAFE -pthread -c -o libcdo_la-after_namelist.lo `test -f 'after_namelist.cc' || echo './'`after_namelist.cc
1881:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c after_vertint.cc  -fno-common -DPIC -o .libs/libcdo_la-after_vertint.o
1882:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c after_namelist.cc  -fno-common -DPIC -o .libs/libcdo_la-after_namelist.o
1883:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c after_namelist.cc -o libcdo_la-after_namelist.o >/dev/null 2>&1
1884:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c after_dvtrans.cc -o libcdo_la-after_dvtrans.o >/dev/null 2>&1
1885:info:build /bin/sh ../libtool  --tag=CXX   --mode=compile /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2  -pipe -Os -stdlib=libc++ -arch x86_64  -D_THREAD_SAFE -pthread -c -o libcdo_la-afterburnerlib.lo `test -f 'afterburnerlib.cc' || echo './'`afterburnerlib.cc
1886:info:build /bin/sh ../libtool  --tag=CXX   --mode=compile /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2  -pipe -Os -stdlib=libc++ -arch x86_64  -D_THREAD_SAFE -pthread -c -o libcdo_la-constants.lo `test -f 'constants.cc' || echo './'`constants.cc
1887:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c afterburnerlib.cc  -fno-common -DPIC -o .libs/libcdo_la-afterburnerlib.o
1888:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c constants.cc  -fno-common -DPIC -o .libs/libcdo_la-constants.o
1889:info:build /bin/sh ../libtool  --tag=CXX   --mode=compile /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2  -pipe -Os -stdlib=libc++ -arch x86_64  -D_THREAD_SAFE -pthread -c -o libcdo_la-color.lo `test -f 'color.cc' || echo './'`color.cc
1890:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c constants.cc -o libcdo_la-constants.o >/dev/null 2>&1
1891:info:build /bin/sh ../libtool  --tag=CXX   --mode=compile /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2  -pipe -Os -stdlib=libc++ -arch x86_64  -D_THREAD_SAFE -pthread -c -o libcdo_la-commandline.lo `test -f 'commandline.cc' || echo './'`commandline.cc
1892:info:build /bin/sh ../libtool  --tag=CXX   --mode=compile /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2  -pipe -Os -stdlib=libc++ -arch x86_64  -D_THREAD_SAFE -pthread -c -o libcdo_la-convert_units.lo `test -f 'convert_units.cc' || echo './'`convert_units.cc
1893:info:build /bin/sh ../libtool  --tag=CXX   --mode=compile /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2  -pipe -Os -stdlib=libc++ -arch x86_64  -D_THREAD_SAFE -pthread -c -o libcdo_la-datetime.lo `test -f 'datetime.cc' || echo './'`datetime.cc
1894:info:build /bin/sh ../libtool  --tag=CXX   --mode=compile /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2  -pipe -Os -stdlib=libc++ -arch x86_64  -D_THREAD_SAFE -pthread -c -o libcdo_la-ecacore.lo `test -f 'ecacore.cc' || echo './'`ecacore.cc
1895:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c color.cc  -fno-common -DPIC -o .libs/libcdo_la-color.o
1896:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c commandline.cc  -fno-common -DPIC -o .libs/libcdo_la-commandline.o
1897:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c convert_units.cc  -fno-common -DPIC -o .libs/libcdo_la-convert_units.o
1898:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c datetime.cc  -fno-common -DPIC -o .libs/libcdo_la-datetime.o
1899:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c ecacore.cc  -fno-common -DPIC -o .libs/libcdo_la-ecacore.o
1900:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c commandline.cc -o libcdo_la-commandline.o >/dev/null 2>&1
1901:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c after_vertint.cc -o libcdo_la-after_vertint.o >/dev/null 2>&1
1902:info:build /bin/sh ../libtool  --tag=CXX   --mode=compile /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2  -pipe -Os -stdlib=libc++ -arch x86_64  -D_THREAD_SAFE -pthread -c -o libcdo_la-ecautil.lo `test -f 'ecautil.cc' || echo './'`ecautil.cc
1903:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c color.cc -o libcdo_la-color.o >/dev/null 2>&1
1904:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c ecautil.cc  -fno-common -DPIC -o .libs/libcdo_la-ecautil.o
1905:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c convert_units.cc -o libcdo_la-convert_units.o >/dev/null 2>&1
1906:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c datetime.cc -o libcdo_la-datetime.o >/dev/null 2>&1
1907:info:build /bin/sh ../libtool  --tag=CXX   --mode=compile /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2  -pipe -Os -stdlib=libc++ -arch x86_64  -D_THREAD_SAFE -pthread -c -o libcdo_la-exception.lo `test -f 'exception.cc' || echo './'`exception.cc
1908:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c exception.cc  -fno-common -DPIC -o .libs/libcdo_la-exception.o
1909:info:build /bin/sh ../libtool  --tag=CXX   --mode=compile /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2  -pipe -Os -stdlib=libc++ -arch x86_64  -D_THREAD_SAFE -pthread -c -o libcdo_la-expr.lo `test -f 'expr.cc' || echo './'`expr.cc
1910:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c expr.cc  -fno-common -DPIC -o .libs/libcdo_la-expr.o
1911:info:build /bin/sh ../libtool  --tag=CXX   --mode=compile /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2  -pipe -Os -stdlib=libc++ -arch x86_64  -D_THREAD_SAFE -pthread -c -o libcdo_la-expr_fun.lo `test -f 'expr_fun.cc' || echo './'`expr_fun.cc
1912:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c ecautil.cc -o libcdo_la-ecautil.o >/dev/null 2>&1
1913:info:build /bin/sh ../libtool  --tag=CXX   --mode=compile /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2  -pipe -Os -stdlib=libc++ -arch x86_64  -D_THREAD_SAFE -pthread -c -o libcdo_la-expr_lex.lo `test -f 'expr_lex.cc' || echo './'`expr_lex.cc
1914:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c expr_fun.cc  -fno-common -DPIC -o .libs/libcdo_la-expr_fun.o
1915:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c exception.cc -o libcdo_la-exception.o >/dev/null 2>&1
1916:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c expr_lex.cc  -fno-common -DPIC -o .libs/libcdo_la-expr_lex.o
1917:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c ecacore.cc -o libcdo_la-ecacore.o >/dev/null 2>&1
1918:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c expr_lex.cc -o libcdo_la-expr_lex.o >/dev/null 2>&1
1919:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c expr_fun.cc -o libcdo_la-expr_fun.o >/dev/null 2>&1
1920:info:build /bin/sh ../libtool  --tag=CXX   --mode=compile /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2  -pipe -Os -stdlib=libc++ -arch x86_64  -D_THREAD_SAFE -pthread -c -o libcdo_la-expr_yacc.lo `test -f 'expr_yacc.cc' || echo './'`expr_yacc.cc
1921:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c expr_yacc.cc  -fno-common -DPIC -o .libs/libcdo_la-expr_yacc.o
1922:info:build /bin/sh ../libtool  --tag=CXX   --mode=compile /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2  -pipe -Os -stdlib=libc++ -arch x86_64  -D_THREAD_SAFE -pthread -c -o libcdo_la-features.lo `test -f 'features.cc' || echo './'`features.cc
1923:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c features.cc  -fno-common -DPIC -o .libs/libcdo_la-features.o
1924:info:build /bin/sh ../libtool  --tag=CXX   --mode=compile /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2  -pipe -Os -stdlib=libc++ -arch x86_64  -D_THREAD_SAFE -pthread -c -o libcdo_la-field.lo `test -f 'field.cc' || echo './'`field.cc
1925:info:build In file included from features.cc:6:
1926:info:build In file included from /opt/local/include/hdf5.h:22:
1927:info:build /opt/local/include/H5public.h:59:13: fatal error: 'mpi.h' file not found
1928:info:build #   include <mpi.h>
1929:info:build             ^
1930:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c expr_yacc.cc -o libcdo_la-expr_yacc.o >/dev/null 2>&1
1931:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c field.cc  -fno-common -DPIC -o .libs/libcdo_la-field.o
1932:info:build /bin/sh ../libtool  --tag=CXX   --mode=compile /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2  -pipe -Os -stdlib=libc++ -arch x86_64  -D_THREAD_SAFE -pthread -c -o libcdo_la-field2.lo `test -f 'field2.cc' || echo './'`field2.cc
1933:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c afterburnerlib.cc -o libcdo_la-afterburnerlib.o >/dev/null 2>&1
1934:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c field2.cc  -fno-common -DPIC -o .libs/libcdo_la-field2.o
1935:info:build /bin/sh ../libtool  --tag=CXX   --mode=compile /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2  -pipe -Os -stdlib=libc++ -arch x86_64  -D_THREAD_SAFE -pthread -c -o libcdo_la-fieldc.lo `test -f 'fieldc.cc' || echo './'`fieldc.cc
1936:info:build 1 error generated.
1937:info:build make[2]: *** [libcdo_la-features.lo] Error 1
1938:info:build make[2]: *** Waiting for unfinished jobs....
1939:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c fieldc.cc  -fno-common -DPIC -o .libs/libcdo_la-fieldc.o
1940:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c after_fctrans.cc -o libcdo_la-after_fctrans.o >/dev/null 2>&1
1941:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c field.cc -o libcdo_la-field.o >/dev/null 2>&1
1942:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c fieldc.cc -o libcdo_la-fieldc.o >/dev/null 2>&1
1943:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c expr.cc -o libcdo_la-expr.o >/dev/null 2>&1
1944:info:build libtool: compile:  /usr/bin/clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -stdlib=libc++ -arch x86_64 -D_THREAD_SAFE -pthread -c field2.cc -o libcdo_la-field2.o >/dev/null 2>&1
1945:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.0/src'
1946:info:build make[1]: *** [all] Error 2
1947:info:build make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.0/src'
1948:info:build make: *** [all-recursive] Error 1
1949:info:build make: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.0'
1950:info:build Command failed:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.0" && /usr/bin/make -j8 -w all
1951:info:build Exit code: 2
1952:error:build Failed to build cdo: command execution failed
1953:debug:build Error code: CHILDSTATUS 58953 2
1954:debug:build Backtrace: command execution failed
1955:debug:build     while executing
1956:debug:build "system {*}$notty {*}$nice $fullcmdstring"
1957:debug:build     invoked from within
1958:debug:build "command_exec build"
1959:debug:build     (procedure "portbuild::build_main" line 8)
1960:debug:build     invoked from within
1961:debug:build "$procedure $targetname"
1962:error:build See /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/main.log for details.