Ticket #67129: main.log

File main.log, 11.0 KB (added by bernard-giroux (Bernard Giroux), 14 months ago)

log file

Line 
1version:1
2:debug:main Starting logging for libmed @4.1.1_0+gfortran+python310
3:debug:sysinfo macOS 13.2.1 (darwin/22.3.0) arch arm
4:debug:sysinfo MacPorts 2.8.1
5:debug:sysinfo Xcode none, CLT 14.2.0.0.1.1668646533
6:debug:sysinfo SDK 13
7:debug:sysinfo MACOSX_DEPLOYMENT_TARGET: 13.0
8:debug:main Attempting ln -sf /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_libmed/libmed/work /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/science/libmed/work
9:debug:main dropping privileges: euid changed to 502, egid changed to 501.
10:debug:main Executing org.macports.main (libmed)
11:debug:main Privilege de-escalation not attempted as not running as root.
12:debug:archivefetch archivefetch phase started at Tue Mar 21 19:23:39 EDT 2023
13:msg:archivefetch --->  Fetching archive for libmed
14:debug:archivefetch Executing proc-pre-org.macports.archivefetch-archivefetch-0
15:debug:archivefetch Executing proc-pre-org.macports.archivefetch-archivefetch-1
16:debug:archivefetch mpi.enforce_variant list:  hdf5
17:debug:archivefetch hdf5 is installed with the following variants: +cxx+hl
18:debug:archivefetch   required: , forbidden:
19:debug:archivefetch   accepted
20:debug:archivefetch hdf5 is installed with the following variants: +cxx+hl
21:debug:archivefetch   required: mpich, forbidden:
22:debug:archivefetch   rejected, because required variant mpich is missing
23:debug:archivefetch hdf5 is installed with the following variants: +cxx+hl
24:debug:archivefetch   required: openmpi, forbidden:
25:debug:archivefetch   rejected, because required variant openmpi is missing
26:debug:archivefetch Executing org.macports.archivefetch (libmed)
27:debug:archivefetch euid/egid changed to: 0/0
28:debug:archivefetch chowned /opt/local/var/macports/incoming to macports
29:debug:archivefetch euid/egid changed to: 502/501
30:info:archivefetch --->  libmed-4.1.1_0+gfortran+python310.darwin_22.arm64.tbz2 doesn't seem to exist in /opt/local/var/macports/incoming/verified
31:msg:archivefetch --->  Attempting to fetch libmed-4.1.1_0+gfortran+python310.darwin_22.arm64.tbz2 from https://packages.macports.org/libmed
32:debug:archivefetch Fetching archive failed: The requested URL returned error: 404
33:msg:archivefetch --->  Attempting to fetch libmed-4.1.1_0+gfortran+python310.darwin_22.arm64.tbz2 from https://ywg.ca.packages.macports.org/mirror/macports/packages/libmed
34:debug:archivefetch Fetching archive failed: The requested URL returned error: 404
35:msg:archivefetch --->  Attempting to fetch libmed-4.1.1_0+gfortran+python310.darwin_22.arm64.tbz2 from http://mirror.fcix.net/macports/packages/libmed
36:debug:archivefetch Fetching archive failed: The requested URL returned error: 404
37:debug:archivefetch Privilege de-escalation not attempted as not running as root.
38:debug:fetch fetch phase started at Tue Mar 21 19:23:39 EDT 2023
39:notice:fetch --->  Fetching distfiles for libmed
40:debug:fetch elevating privileges for fetch: euid changed to 0, egid changed to 0.
41:debug:fetch dropping privileges: euid changed to 502, egid changed to 501.
42:debug:fetch Executing proc-pre-org.macports.fetch-fetch-0
43:debug:fetch Executing proc-pre-org.macports.fetch-fetch-1
44:debug:fetch mpi.enforce_variant list:  hdf5
45:debug:fetch hdf5 is installed with the following variants: +cxx+hl
46:debug:fetch   required: , forbidden:
47:debug:fetch   accepted
48:debug:fetch hdf5 is installed with the following variants: +cxx+hl
49:debug:fetch   required: mpich, forbidden:
50:debug:fetch   rejected, because required variant mpich is missing
51:debug:fetch hdf5 is installed with the following variants: +cxx+hl
52:debug:fetch   required: openmpi, forbidden:
53:debug:fetch   rejected, because required variant openmpi is missing
54:debug:fetch Executing org.macports.fetch (libmed)
55:info:fetch --->  med-4.1.1.tar.gz does not exist in /opt/local/var/macports/distfiles/libmed
56:notice:fetch --->  Attempting to fetch med-4.1.1.tar.gz from https://distfiles.macports.org/libmed
57:debug:fetch Privilege de-escalation not attempted as not running as root.
58:debug:checksum checksum phase started at Tue Mar 21 19:24:24 EDT 2023
59:notice:checksum --->  Verifying checksums for libmed
60:debug:checksum Executing org.macports.checksum (libmed)
61:info:checksum --->  Checksumming med-4.1.1.tar.gz
62:debug:checksum Calculated (rmd160) is 2e0a189cb4b5d72ae88c8e8fb26a61821e4e60be
63:debug:checksum Correct (rmd160) checksum for med-4.1.1.tar.gz
64:debug:checksum Calculated (sha256) is dc2b5d54ebf0666e3ff2e974041d2ab0da906061323537023ab165d573389dd0
65:debug:checksum Correct (sha256) checksum for med-4.1.1.tar.gz
66:debug:checksum Calculated (size) is 50506725
67:debug:checksum Correct (size) checksum for med-4.1.1.tar.gz
68:debug:checksum Privilege de-escalation not attempted as not running as root.
69:debug:extract extract phase started at Tue Mar 21 19:24:24 EDT 2023
70:notice:extract --->  Extracting libmed
71:debug:extract Executing org.macports.extract (libmed)
72:info:extract --->  Extracting med-4.1.1.tar.gz
73:debug:extract setting option extract.args to '/opt/local/var/macports/distfiles/libmed/med-4.1.1.tar.gz'
74:debug:extract Environment:
75:debug:extract CC_PRINT_OPTIONS='YES'
76:debug:extract CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_libmed/libmed/work/.CC_PRINT_OPTIONS'
77:debug:extract CPATH='/opt/local/include'
78:debug:extract DEVELOPER_DIR='/Library/Developer/CommandLineTools'
79:debug:extract LIBRARY_PATH='/opt/local/lib'
80:debug:extract MACOSX_DEPLOYMENT_TARGET='13.0'
81:debug:extract SDKROOT='/Library/Developer/CommandLineTools/SDKs/MacOSX13.sdk'
82:info:extract Executing:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_libmed/libmed/work" && /usr/bin/gzip -dc '/opt/local/var/macports/distfiles/libmed/med-4.1.1.tar.gz' | /usr/bin/tar -xf -
83:debug:extract system:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_libmed/libmed/work" && /usr/bin/gzip -dc '/opt/local/var/macports/distfiles/libmed/med-4.1.1.tar.gz' | /usr/bin/tar -xf -
84:debug:extract euid/egid changed to: 0/0
85:debug:extract chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_libmed/libmed/work to macports
86:debug:extract euid/egid changed to: 502/501
87:debug:extract Privilege de-escalation not attempted as not running as root.
88:debug:patch patch phase started at Tue Mar 21 19:24:25 EDT 2023
89:debug:patch Executing org.macports.patch (libmed)
90:notice:patch --->  Applying patches to libmed
91:info:patch --->  Applying patch-hdf5-1.12.diff
92:debug:patch Creating patch directory: /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_libmed/libmed/work/med-4.1.1
93:debug:patch Environment:
94:debug:patch CC_PRINT_OPTIONS='YES'
95:debug:patch CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_libmed/libmed/work/.CC_PRINT_OPTIONS'
96:debug:patch CPATH='/opt/local/include'
97:debug:patch DEVELOPER_DIR='/Library/Developer/CommandLineTools'
98:debug:patch LIBRARY_PATH='/opt/local/lib'
99:debug:patch MACOSX_DEPLOYMENT_TARGET='13.0'
100:debug:patch SDKROOT='/Library/Developer/CommandLineTools/SDKs/MacOSX13.sdk'
101:info:patch Executing:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_libmed/libmed/work/med-4.1.1" && /usr/bin/patch -p0 < '/opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/science/libmed/files/patch-hdf5-1.12.diff'
102:debug:patch system:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_libmed/libmed/work/med-4.1.1" && /usr/bin/patch -p0 < '/opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/science/libmed/files/patch-hdf5-1.12.diff'
103:info:patch File to patch:
104:info:patch Command failed:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_libmed/libmed/work/med-4.1.1" && /usr/bin/patch -p0 < '/opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/science/libmed/files/patch-hdf5-1.12.diff'
105:info:patch Exit code: 2
106:debug:patch process_cmd aborted: interrupted by signal
107:debug:patch     while executing
108:debug:patch "system {*}$notty {*}$callback {*}$nice $fullcmdstring"
109:debug:patch     invoked from within
110:debug:patch "catch {system {*}$notty {*}$callback {*}$nice $fullcmdstring} result"
111:debug:patch     (procedure "command_exec" line 106)
112:debug:patch     invoked from within
113:debug:patch "command_exec patch "" "< '$patch'""
114:debug:patch     (procedure "portpatch::patch_main" line 41)
115:debug:patch     invoked from within
116:debug:patch "$procedure $targetname"
117:debug:patch     invoked from within
118:debug:patch "catch {$procedure $targetname} errstr"
119:debug:patch     (procedure "target_run" line 172)
120:debug:patch     invoked from within
121:debug:patch "{*}$handler $ditem"
122:debug:patch     invoked from within
123:debug:patch "catch {{*}$handler $ditem} result"
124:debug:patch     (procedure "dlist_eval" line 33)
125:debug:patch     invoked from within
126:debug:patch "dlist_eval $dlist "" target_run"
127:debug:patch     (procedure "eval_targets" line 41)
128:debug:patch     invoked from within
129:debug:patch "eval_targets activate"
130:debug:patch     invoked from within
131:debug:patch "$workername eval "eval_targets $target""
132:debug:patch     invoked from within
133:debug:patch "catch {$workername eval "eval_targets $target"} result"
134:debug:patch     (procedure "_mportexec" line 14)
135:debug:patch     invoked from within
136:debug:patch "{*}$handler $ditem"
137:debug:patch     invoked from within
138:debug:patch "catch {{*}$handler $ditem} result"
139:debug:patch     (procedure "dlist_eval" line 33)
140:debug:patch     invoked from within
141:debug:patch "dlist_eval $dlist _mportactive [list _mportexec activate]"
142:debug:patch     (procedure "mportexec" line 101)
143:debug:patch     invoked from within
144:debug:patch "mportexec $workername $target"
145:debug:patch     invoked from within
146:debug:patch "catch {mportexec $workername $target} result"
147:debug:patch     ("uplevel" body line 99)
148:debug:patch     invoked from within
149:debug:patch "uplevel 1 $block"
150:debug:patch     (procedure "foreachport" line 24)
151:debug:patch     invoked from within
152:debug:patch "foreachport $portlist {
153:debug:patch         array unset portinfo
154:debug:patch         # If we have a url, use that, since it's most specific
155:debug:patch         # otherwise try to map the..."
156:debug:patch     (procedure "action_target" line 10)
157:debug:patch     invoked from within
158:debug:patch "$action_proc $action $portlist [array get global_options]"
159:debug:patch     (procedure "process_cmd" line 110)
160:debug:patch     invoked from within
161:debug:patch "process_cmd $remaining_args"
162:debug:patch     ("try" body line 3)
163:error:patch Aborted: SIGINT received.