Changes between Initial Version and Version 1 of Ticket #45911


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Timestamp:
Nov 17, 2014, 2:59:22 AM (9 years ago)
Author:
ryandesign (Ryan Carsten Schmidt)
Comment:

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  • Ticket #45911

    • Property Cc eborisch@… sean@… added
    • Property Port py27-h5py openmpi-gcc48 added

  • Ticket #45911 – Description

    initial v1  
    11Hi,
    22
    3 I am attempting to build py27-h5py on Yosemite.  I have the following hdf5 installed:  hdf5 @1.8.13_0+cxx+gcc48+openmpi+szip.  The difficulty is that openmpi puts headers in the subdirectory /opt/local/include/openmpi-gcc48, so when I try to build py27-h5py I get:
     3I am attempting to build py27-h5py on Yosemite.  I have the following hdf5 installed:  `hdf5 @1.8.13_0+cxx+gcc48+openmpi+szip`.  The difficulty is that openmpi puts headers in the subdirectory /opt/local/include/openmpi-gcc48, so when I try to build py27-h5py I get:
    44
     5{{{
    56In file included from h5py/defs.c:241:
    67In file included from h5py/api_compat.h:27:
    … …  
    1011            ^
    11121 warning and 1 error generated.
     13}}}
    1214
    1315I would think the problem could be avoided by either defining CPPFLAGS appropriately or by using mpicc for compilation.  My system info:
    1416
    15 OS X 10.10
    16 Xcode 6.1
    17 clang:  Apple LLVM version 6.0 (clang-600.0.54) (based on LLVM 3.5svn)
     17OS X 10.10 [[br]]
     18Xcode 6.1 [[br]]
     19clang:  `Apple LLVM version 6.0 (clang-600.0.54) (based on LLVM 3.5svn)`
    1820
    1921Installed openmpi:
     22{{{
    2023openmpi-default @1.7.5_3+gcc48 (active)
    2124openmpi-gcc48 @1.7.5_3+fortran (active)
     25}}}
    2226
    2327Please let me know if you need any more info.
    2428
    25 Thanks,
     29Thanks, [[br]]
    2630Charles