Error: Processing of port cdo failed

[sibylles]

Mac OSX 10.7.5 MacPorts base version 2.4.2 installed, The ports tree has been updated. To upgrade your installed ports, you should run

port upgrade outdated

Sibylles-MacBook-Air:~ Sibylle$ sudo port -d install cdo DEBUG: Copying /Users/Sibylle/Library/Preferences/com.apple.dt.Xcode.plist to /opt/local/var/macports/home/Library/Preferences DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/science/cdo DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Sourcing PortGroup active_variants 1.1 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/active_variants-1.1.tcl DEBUG: Sourcing PortGroup compilers 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compilers-1.0.tcl DEBUG: Sourcing PortGroup mpi 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/mpi-1.0.tcl DEBUG: Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl DEBUG: Sourcing PortGroup cxx11 1.1 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/cxx11-1.1.tcl DEBUG: adding the default universal variant DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Executing variant eccodes provides eccodes DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Chosen compiler macports-clang-5.0 is provided by a port, adding dependency DEBUG: Adding depends_build port:clang-5.0 DEBUG: Adding depends_skip_archcheck clang-5.0 DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Running callback cxx11.add_dependencies DEBUG: Finished running callback cxx11.add_dependencies DEBUG: Attempting ln -sf /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/science/cdo/work DEBUG: dropping privileges: euid changed to 502, egid changed to 501. DEBUG: Starting logging for cdo DEBUG: epoch: in tree: 2 installed: 2 DEBUG: clang-5.0 5.0.1_0 exists in the ports tree DEBUG: clang-5.0 5.0.1_0 +analyzer+libstdcxx is the latest installed DEBUG: clang-5.0 5.0.1_0 +analyzer+libstdcxx is active DEBUG: Merging existing variants '+analyzer+libstdcxx' into variants DEBUG: new fully merged portvariants: libstdcxx + analyzer + DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/lang/llvm-5.0 DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl DEBUG: Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl DEBUG: Sourcing PortGroup active_variants 1.1 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/active_variants-1.1.tcl DEBUG: Re-registering default for configure.dir DEBUG: Re-registering default for configure.pre_args DEBUG: Re-registering default for build.dir DEBUG: Re-registering default for destroot.target DEBUG: Sourcing PortGroup cmake 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/cmake-1.0.tcl DEBUG: Re-registering default for configure.dir DEBUG: Re-registering default for build.dir DEBUG: compiler clang 425.0.28 blacklisted because it matches {clang < 602} Warning: All compilers are either blacklisted or unavailable; defaulting to first fallback option DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: universal variant already exists, so not adding the default one DEBUG: Executing variant analyzer provides analyzer DEBUG: Executing variant libstdcxx provides libstdcxx DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Chosen compiler macports-clang-4.0 is provided by a port, adding dependency DEBUG: Adding depends_build port:clang-4.0 DEBUG: Adding depends_skip_archcheck clang-4.0 DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! clang-5.0 5.0.1_0 >= clang-5.0 5.0.1_0 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: libxml2 2.9.7_0 exists in the ports tree DEBUG: libxml2 2.9.7_0 is the latest installed DEBUG: libxml2 2.9.7_0 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/textproc/libxml2 DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: adding the default universal variant DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! libxml2 2.9.7_0 >= libxml2 2.9.7_0 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: libiconv 1.15_0 exists in the ports tree DEBUG: libiconv 1.15_0 is the latest installed DEBUG: libiconv 1.15_0 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/textproc/libiconv DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl DEBUG: universal variant already exists, so not adding the default one DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! libiconv 1.15_0 >= libiconv 1.15_0 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: xz 5.2.3_0 exists in the ports tree DEBUG: xz 5.2.3_0 is the latest installed DEBUG: xz 5.2.3_0 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/archivers/xz DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: adding the default universal variant DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! xz 5.2.3_0 >= xz 5.2.3_0 DEBUG: epoch: in tree: 2 installed: 2 DEBUG: gettext 0.19.8.1_0 exists in the ports tree DEBUG: gettext 0.19.8.1_0 is the latest installed DEBUG: gettext 0.19.8.1_0 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/gettext DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl DEBUG: compiler clang 425.0.28 not blacklisted because it doesn't match {clang < 211.10.1} DEBUG: universal variant already exists, so not adding the default one DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! gettext 0.19.8.1_0 >= gettext 0.19.8.1_0 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: expat 2.2.5_0 exists in the ports tree DEBUG: expat 2.2.5_0 is the latest installed DEBUG: expat 2.2.5_0 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/textproc/expat DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: adding the default universal variant DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! expat 2.2.5_0 >= expat 2.2.5_0 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: ncurses 6.0-20171125_0 exists in the ports tree DEBUG: ncurses 6.0-20171125_0 is the latest installed DEBUG: ncurses 6.0-20171125_0 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/ncurses DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: adding the default universal variant DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! ncurses 6.0-20171125_0 >= ncurses 6.0-20171125_0 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: zlib 1.2.11_0 exists in the ports tree DEBUG: zlib 1.2.11_0 is the latest installed DEBUG: zlib 1.2.11_0 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/archivers/zlib DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Sourcing PortGroup xcodeversion 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/xcodeversion-1.0.tcl DEBUG: adding the default universal variant DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! zlib 1.2.11_0 >= zlib 1.2.11_0 DEBUG: epoch: in tree: 1 installed: 1 DEBUG: libomp 5.0.0_0 exists in the ports tree DEBUG: libomp 3.8.1_3 +universal is the latest installed DEBUG: libomp 3.8.1_3 +universal is active DEBUG: Merging existing variants '+universal' into variants DEBUG: new fully merged portvariants: universal + DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/lang/libomp DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Re-registering default for configure.dir DEBUG: Re-registering default for configure.pre_args DEBUG: Re-registering default for build.dir DEBUG: Re-registering default for destroot.target DEBUG: Sourcing PortGroup cmake 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/cmake-1.0.tcl DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl DEBUG: Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl DEBUG: Sourcing PortGroup github 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/github-1.0.tcl DEBUG: compiler clang 425.0.28 blacklisted because it matches {clang < 500} DEBUG: universal variant already exists, so not adding the default one DEBUG: Executing variant universal provides universal DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Chosen compiler macports-clang-3.4 is provided by a port, adding dependency DEBUG: Adding depends_build port:clang-3.4 DEBUG: Adding depends_skip_archcheck clang-3.4 DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! libomp 3.8.1_3 >= libomp 3.8.1_3 DEBUG: epoch: in tree: 2 installed: 2 DEBUG: llvm-5.0 5.0.1_0 exists in the ports tree DEBUG: llvm-5.0 5.0.1_0 is the latest installed DEBUG: llvm-5.0 5.0.1_0 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/lang/llvm-5.0 DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl DEBUG: Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl DEBUG: Sourcing PortGroup active_variants 1.1 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/active_variants-1.1.tcl DEBUG: Re-registering default for configure.dir DEBUG: Re-registering default for configure.pre_args DEBUG: Re-registering default for build.dir DEBUG: Re-registering default for destroot.target DEBUG: Sourcing PortGroup cmake 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/cmake-1.0.tcl DEBUG: Re-registering default for configure.dir DEBUG: Re-registering default for build.dir DEBUG: compiler clang 425.0.28 blacklisted because it matches {clang < 602} DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: universal variant already exists, so not adding the default one DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Chosen compiler macports-clang-4.0 is provided by a port, adding dependency DEBUG: Adding depends_build port:clang-4.0 DEBUG: Adding depends_skip_archcheck clang-4.0 DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! llvm-5.0 5.0.1_0 >= llvm-5.0 5.0.1_0 DEBUG: epoch: in tree: 20090923 installed: 20090923 DEBUG: libedit 20170329-3.1_2 exists in the ports tree DEBUG: libedit 20170329-3.1_2 is the latest installed DEBUG: libedit 20170329-3.1_2 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/libedit DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl DEBUG: universal variant already exists, so not adding the default one DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! libedit 20170329-3.1_2 >= libedit 20170329-3.1_2 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: libffi 3.2.1_0 exists in the ports tree DEBUG: libffi 3.2.1_0 is the latest installed DEBUG: libffi 3.2.1_0 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/libffi DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl DEBUG: universal variant already exists, so not adding the default one DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! libffi 3.2.1_0 >= libffi 3.2.1_0 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: xar 1.6.1_0 exists in the ports tree DEBUG: xar 1.6.1_0 is the latest installed DEBUG: xar 1.6.1_0 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/archivers/xar DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Sourcing PortGroup github 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/github-1.0.tcl DEBUG: adding the default universal variant DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! xar 1.6.1_0 >= xar 1.6.1_0 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: bzip2 1.0.6_0 exists in the ports tree DEBUG: bzip2 1.0.6_0 is the latest installed DEBUG: bzip2 1.0.6_0 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/archivers/bzip2 DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: universal variant already exists, so not adding the default one DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! bzip2 1.0.6_0 >= bzip2 1.0.6_0 DEBUG: epoch: in tree: 1 installed: 1 DEBUG: openssl 1.0.2n_0 exists in the ports tree DEBUG: openssl 1.0.2n_0 is the latest installed DEBUG: openssl 1.0.2n_0 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/openssl DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl DEBUG: universal variant already exists, so not adding the default one DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! openssl 1.0.2n_0 >= openssl 1.0.2n_0 DEBUG: epoch: in tree: 1 installed: 1 DEBUG: libcxx 3.9.1_1 exists in the ports tree DEBUG: libcxx 3.9.1_1 +universal is the latest installed DEBUG: libcxx 3.9.1_1 +universal is active DEBUG: Merging existing variants '+universal' into variants DEBUG: new fully merged portvariants: universal + DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/lang/libcxx DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: universal variant already exists, so not adding the default one DEBUG: Executing variant universal provides universal DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! libcxx 3.9.1_1 >= libcxx 3.9.1_1 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: perl5 5.24.2_0 exists in the ports tree DEBUG: perl5 5.24.2_0 +perl5_24 is the latest installed DEBUG: perl5 5.24.2_0 +perl5_24 is active DEBUG: Merging existing variants '+perl5_24' into variants DEBUG: new fully merged portvariants: perl5_24 + DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/lang/perl5 DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Re-registering default for configure.universal_args DEBUG: Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl DEBUG: universal_variant is false, so not adding the default universal variant DEBUG: Executing variant perl5_24 provides perl5_24 DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! perl5 5.24.2_0 >= perl5 5.24.2_0 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: perl5.24 5.24.3_0 exists in the ports tree DEBUG: perl5.24 5.24.3_0 is the latest installed DEBUG: perl5.24 5.24.3_0 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/lang/perl5 DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Re-registering default for configure.universal_args DEBUG: Sourcing PortGroup perl5 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/perl5-1.0.tcl DEBUG: adding the default universal variant DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! perl5.24 5.24.3_0 >= perl5.24 5.24.3_0 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: gdbm 1.13_3 exists in the ports tree DEBUG: gdbm 1.13_3 is the latest installed DEBUG: gdbm 1.13_3 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/databases/gdbm DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: adding the default universal variant DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! gdbm 1.13_3 >= gdbm 1.13_3 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: readline 7.0.003_1 exists in the ports tree DEBUG: readline 7.0.003_1 is the latest installed DEBUG: readline 7.0.003_1 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/readline DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl DEBUG: universal variant already exists, so not adding the default one DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! readline 7.0.003_1 >= readline 7.0.003_1 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: llvm_select 2_0 exists in the ports tree DEBUG: llvm_select 2_0 is the latest installed DEBUG: llvm_select 2_0 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/sysutils/llvm_select DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl DEBUG: universal_variant is false, so not adding the default universal variant DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! llvm_select 2_0 >= llvm_select 2_0 DEBUG: epoch: in tree: 2 installed: 2 DEBUG: python27 2.7.14_0 exists in the ports tree DEBUG: python27 2.7.14_0 is the latest installed DEBUG: python27 2.7.14_0 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/lang/python27 DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: universal variant already exists, so not adding the default one DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! python27 2.7.14_0 >= python27 2.7.14_0 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: db48 4.8.30_4 exists in the ports tree DEBUG: db48 4.8.30_4 is the latest installed DEBUG: db48 4.8.30_4 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/databases/db48 DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl DEBUG: universal variant already exists, so not adding the default one DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! db48 4.8.30_4 >= db48 4.8.30_4 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: sqlite3 3.21.0_0 exists in the ports tree DEBUG: sqlite3 3.21.0_0 is the latest installed DEBUG: sqlite3 3.21.0_0 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/databases/sqlite3 DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: adding the default universal variant DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! sqlite3 3.21.0_0 >= sqlite3 3.21.0_0 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: python_select 0.3_7 exists in the ports tree DEBUG: python_select 0.3_7 is the latest installed DEBUG: python_select 0.3_7 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/sysutils/python_select DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl DEBUG: universal_variant is false, so not adding the default universal variant DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! python_select 0.3_7 >= python_select 0.3_7 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: python2_select 0.0_2 exists in the ports tree DEBUG: python2_select 0.0_2 is the latest installed DEBUG: python2_select 0.0_2 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/sysutils/python2_select DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl DEBUG: universal_variant is false, so not adding the default universal variant DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! python2_select 0.0_2 >= python2_select 0.0_2 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: clang_select 2_0 exists in the ports tree DEBUG: clang_select 2_0 is the latest installed DEBUG: clang_select 2_0 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/sysutils/clang_select DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl DEBUG: universal_variant is false, so not adding the default universal variant DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! clang_select 2_0 >= clang_select 2_0 DEBUG: epoch: in tree: 2 installed: 2 DEBUG: ld64 3_0 exists in the ports tree DEBUG: ld64 3_0 is the latest installed DEBUG: ld64 3_0 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/ld64 DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: universal variant already exists, so not adding the default one DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! ld64 3_0 >= ld64 3_0 DEBUG: epoch: in tree: 2 installed: 2 DEBUG: ld64-latest 274.2_2 exists in the ports tree DEBUG: ld64-latest 274.2_2 +llvm34 is the latest installed DEBUG: ld64-latest 274.2_2 +llvm34 is active DEBUG: Merging existing variants '+llvm34' into variants DEBUG: new fully merged portvariants: llvm34 + DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/ld64 DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl DEBUG: compiler clang 425.0.28 not blacklisted because it doesn't match {clang < 300} DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: universal variant already exists, so not adding the default one DEBUG: Executing variant llvm34 provides llvm34 DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! ld64-latest 274.2_2 >= ld64-latest 274.2_2 DEBUG: epoch: in tree: 1 installed: 1 DEBUG: llvm-3.4 3.4.2_12 exists in the ports tree DEBUG: llvm-3.4 3.4.2_12 is the latest installed DEBUG: llvm-3.4 3.4.2_12 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/lang/llvm-3.4 DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl DEBUG: Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl DEBUG: compiler gcc-4.2 blacklisted because it's not installed or it doesn't work DEBUG: compiler clang 425.0.28 not blacklisted because it doesn't match {clang < 421} DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: universal variant already exists, so not adding the default one DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! llvm-3.4 3.4.2_12 >= llvm-3.4 3.4.2_12 DEBUG: epoch: in tree: 3 installed: 3 DEBUG: netcdf 4.4.1.1_1 exists in the ports tree DEBUG: netcdf 4.4.1.1_1 +dap+netcdf4 is the latest installed DEBUG: netcdf 4.4.1.1_1 +dap+netcdf4 is active DEBUG: Merging existing variants '+dap+netcdf4' into variants DEBUG: new fully merged portvariants: netcdf4 + dap + DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/science/netcdf DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Sourcing PortGroup active_variants 1.1 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/active_variants-1.1.tcl DEBUG: Sourcing PortGroup compilers 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compilers-1.0.tcl DEBUG: Sourcing PortGroup mpi 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/mpi-1.0.tcl DEBUG: Sourcing PortGroup github 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/github-1.0.tcl DEBUG: Re-registering default for configure.dir DEBUG: Re-registering default for configure.pre_args DEBUG: Re-registering default for build.dir DEBUG: Re-registering default for destroot.target DEBUG: Sourcing PortGroup cmake 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/cmake-1.0.tcl DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl DEBUG: universal variant already exists, so not adding the default one DEBUG: Executing variant netcdf4 provides netcdf4 DEBUG: Executing variant dap provides dap DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! netcdf 4.4.1.1_1 >= netcdf 4.4.1.1_1 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: hdf5 1.10.1_2 exists in the ports tree DEBUG: hdf5 1.10.1_2 +cxx+hl is the latest installed DEBUG: hdf5 1.10.1_2 +cxx+hl is active DEBUG: Merging existing variants '+cxx+hl' into variants DEBUG: new fully merged portvariants: hl + cxx + DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/science/hdf5 DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl DEBUG: Sourcing PortGroup active_variants 1.1 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/active_variants-1.1.tcl DEBUG: Sourcing PortGroup compilers 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compilers-1.0.tcl DEBUG: Sourcing PortGroup mpi 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/mpi-1.0.tcl DEBUG: universal variant already exists, so not adding the default one DEBUG: Executing variant hl provides hl DEBUG: Executing variant cxx provides cxx DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! hdf5 1.10.1_2 >= hdf5 1.10.1_2 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: curl 7.57.0_2 exists in the ports tree DEBUG: curl 7.57.0_2 +ssl is the latest installed DEBUG: curl 7.57.0_2 +ssl is active DEBUG: Merging existing variants '+ssl' into variants DEBUG: new fully merged portvariants: ssl + DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/net/curl DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl DEBUG: universal variant already exists, so not adding the default one DEBUG: Executing variant ssl provides ssl DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! curl 7.57.0_2 >= curl 7.57.0_2 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: libidn2 2.0.4_0 exists in the ports tree DEBUG: libidn2 2.0.4_0 is the latest installed DEBUG: libidn2 2.0.4_0 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/mail/libidn2 DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: adding the default universal variant DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! libidn2 2.0.4_0 >= libidn2 2.0.4_0 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: libunistring 0.9.8_0 exists in the ports tree DEBUG: libunistring 0.9.8_0 is the latest installed DEBUG: libunistring 0.9.8_0 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/textproc/libunistring DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: adding the default universal variant DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! libunistring 0.9.8_0 >= libunistring 0.9.8_0 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: libpsl 0.19.1_2 exists in the ports tree DEBUG: libpsl 0.19.1_2 is the latest installed DEBUG: libpsl 0.19.1_2 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/net/libpsl DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Sourcing PortGroup github 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/github-1.0.tcl DEBUG: adding the default universal variant DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! libpsl 0.19.1_2 >= libpsl 0.19.1_2 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: glib2 2.54.2_1 exists in the ports tree DEBUG: glib2 2.54.2_1 +x11 is the latest installed DEBUG: glib2 2.54.2_1 +x11 is active DEBUG: Merging existing variants '+x11' into variants DEBUG: new fully merged portvariants: x11 + DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/glib2 DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl DEBUG: compiler clang 425.0.28 not blacklisted because it doesn't match {clang < 318} DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: adding the default universal variant DEBUG: Executing variant x11 provides x11 DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! glib2 2.54.2_1 >= glib2 2.54.2_1 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: pcre 8.41_0 exists in the ports tree DEBUG: pcre 8.41_0 is the latest installed DEBUG: pcre 8.41_0 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/pcre DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: adding the default universal variant DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! pcre 8.41_0 >= pcre 8.41_0 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: curl-ca-bundle 7.57.0_0 exists in the ports tree DEBUG: curl-ca-bundle 7.57.0_0 is the latest installed DEBUG: curl-ca-bundle 7.57.0_0 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/net/curl DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: universal_variant is false, so not adding the default universal variant DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! curl-ca-bundle 7.57.0_0 >= curl-ca-bundle 7.57.0_0 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: udunits2 2.2.25_0 exists in the ports tree DEBUG: udunits2 2.2.25_0 is the latest installed DEBUG: udunits2 2.2.25_0 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/science/udunits2 DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Sourcing PortGroup github 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/github-1.0.tcl DEBUG: Re-registering default for configure.dir DEBUG: Re-registering default for configure.pre_args DEBUG: Re-registering default for build.dir DEBUG: Re-registering default for destroot.target DEBUG: Sourcing PortGroup cmake 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/cmake-1.0.tcl DEBUG: adding the default universal variant DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! udunits2 2.2.25_0 >= udunits2 2.2.25_0 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: cunit 2.1-3_1 exists in the ports tree DEBUG: cunit 2.1-3_1 is the latest installed DEBUG: cunit 2.1-3_1 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/cunit DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: adding the default universal variant DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! cunit 2.1-3_1 >= cunit 2.1-3_1 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: proj 4.9.3_0 exists in the ports tree DEBUG: proj 4.9.3_0 is the latest installed DEBUG: proj 4.9.3_0 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/gis/proj DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: adding the default universal variant DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! proj 4.9.3_0 >= proj 4.9.3_0 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: fftw-3 3.3.5_1 exists in the ports tree DEBUG: fftw-3 3.3.5_1 is the latest installed DEBUG: fftw-3 3.3.5_1 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/math/fftw-3 DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl DEBUG: Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl DEBUG: Sourcing PortGroup active_variants 1.1 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/active_variants-1.1.tcl DEBUG: Sourcing PortGroup compilers 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compilers-1.0.tcl DEBUG: Sourcing PortGroup mpi 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/mpi-1.0.tcl DEBUG: compiler clang 425.0.28 not blacklisted because it doesn't match {clang <= 211.10.1} DEBUG: universal variant already exists, so not adding the default one DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! fftw-3 3.3.5_1 >= fftw-3 3.3.5_1 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: ecCodes 2.5.0_0 exists in the ports tree DEBUG: ecCodes 2.5.0_0 +gcc7 is the latest installed DEBUG: ecCodes 2.5.0_0 +gcc7 is active DEBUG: Merging existing variants '+gcc7' into variants DEBUG: new fully merged portvariants: gcc7 + DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/science/ecCodes DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Re-registering default for configure.dir DEBUG: Re-registering default for configure.pre_args DEBUG: Re-registering default for build.dir DEBUG: Re-registering default for destroot.target DEBUG: Sourcing PortGroup cmake 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/cmake-1.0.tcl DEBUG: Sourcing PortGroup active_variants 1.1 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/active_variants-1.1.tcl DEBUG: Sourcing PortGroup compilers 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compilers-1.0.tcl DEBUG: adding the default universal variant DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Executing variant gcc7 provides gcc7 DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! ecCodes 2.5.0_0 >= ecCodes 2.5.0_0 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: jasper 2.0.14_0 exists in the ports tree DEBUG: jasper 2.0.14_0 is the latest installed DEBUG: jasper 2.0.14_0 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/graphics/jasper DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Re-registering default for configure.dir DEBUG: Re-registering default for configure.pre_args DEBUG: Re-registering default for build.dir DEBUG: Re-registering default for destroot.target DEBUG: Sourcing PortGroup cmake 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/cmake-1.0.tcl DEBUG: adding the default universal variant DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! jasper 2.0.14_0 >= jasper 2.0.14_0 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: jpeg 9b_0 exists in the ports tree DEBUG: jpeg 9b_0 is the latest installed DEBUG: jpeg 9b_0 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/graphics/jpeg DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: adding the default universal variant DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! jpeg 9b_0 >= jpeg 9b_0 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: openjpeg15 1.5.2_0 exists in the ports tree DEBUG: openjpeg15 1.5.2_0 is the latest installed DEBUG: openjpeg15 1.5.2_0 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/graphics/openjpeg15 DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Sourcing PortGroup github 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/github-1.0.tcl DEBUG: adding the default universal variant DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! openjpeg15 1.5.2_0 >= openjpeg15 1.5.2_0 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: libpng 1.6.34_0 exists in the ports tree DEBUG: libpng 1.6.34_0 is the latest installed DEBUG: libpng 1.6.34_0 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/graphics/libpng DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: adding the default universal variant DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! libpng 1.6.34_0 >= libpng 1.6.34_0 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: tiff 4.0.9_0 exists in the ports tree DEBUG: tiff 4.0.9_0 is the latest installed DEBUG: tiff 4.0.9_0 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/graphics/tiff DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Sourcing PortGroup xcodeversion 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/xcodeversion-1.0.tcl DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl DEBUG: universal variant already exists, so not adding the default one DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! tiff 4.0.9_0 >= tiff 4.0.9_0 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: lcms2 2.9_0 exists in the ports tree DEBUG: lcms2 2.9_0 is the latest installed DEBUG: lcms2 2.9_0 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/graphics/lcms2 DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl DEBUG: universal variant already exists, so not adding the default one DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! lcms2 2.9_0 >= lcms2 2.9_0 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: jbigkit 2.1_0 exists in the ports tree DEBUG: jbigkit 2.1_0 is the latest installed DEBUG: jbigkit 2.1_0 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/graphics/jbigkit DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: universal variant already exists, so not adding the default one DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! jbigkit 2.1_0 >= jbigkit 2.1_0 DEBUG: epoch: in tree: 2 installed: 2 DEBUG: libgcc 7.2.0_1 exists in the ports tree DEBUG: libgcc 7.2.0_1 is the latest installed DEBUG: libgcc 7.2.0_1 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/lang/gcc7 DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Sourcing PortGroup select 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/select-1.0.tcl DEBUG: Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl DEBUG: compiler llvm-gcc-4.2 2336.11.00 not blacklisted because it doesn't match {llvm-gcc-4.2 < 2336.1} DEBUG: compiler clang 425.0.28 not blacklisted because it doesn't match {clang < 300} DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: universal variant already exists, so not adding the default one DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! libgcc 7.2.0_1 >= libgcc 7.2.0_1 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: cctools 895_4 exists in the ports tree DEBUG: cctools 895_4 +llvm34 is the latest installed DEBUG: cctools 895_4 +llvm34 is active DEBUG: Merging existing variants '+llvm34' into variants DEBUG: new fully merged portvariants: llvm34 + DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/cctools DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: universal variant already exists, so not adding the default one DEBUG: Executing variant llvm34 provides llvm34 DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! cctools 895_4 >= cctools 895_4 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: gmp 6.1.2_1 exists in the ports tree DEBUG: gmp 6.1.2_1 is the latest installed DEBUG: gmp 6.1.2_1 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/gmp DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl DEBUG: universal variant already exists, so not adding the default one DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! gmp 6.1.2_1 >= gmp 6.1.2_1 DEBUG: epoch: in tree: 2 installed: 2 DEBUG: isl 0.18_0 exists in the ports tree DEBUG: isl 0.18_0 is the latest installed DEBUG: isl 0.18_0 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/isl DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl DEBUG: universal variant already exists, so not adding the default one DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! isl 0.18_0 >= isl 0.18_0 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: libmpc 1.0.3_0 exists in the ports tree DEBUG: libmpc 1.0.3_0 is the latest installed DEBUG: libmpc 1.0.3_0 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/libmpc DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: adding the default universal variant DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! libmpc 1.0.3_0 >= libmpc 1.0.3_0 DEBUG: epoch: in tree: 0 installed: 0 DEBUG: mpfr 3.1.6_0 exists in the ports tree DEBUG: mpfr 3.1.6_0 is the latest installed DEBUG: mpfr 3.1.6_0 is active DEBUG: Merging existing variants into variants DEBUG: new fully merged portvariants: DEBUG: Changing to port directory: /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/devel/mpfr DEBUG: OS darwin/11.4.2 (Mac OS X 10.7) arch i386 DEBUG: Reading variant descriptions from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/variant_descriptions.conf DEBUG: Sourcing PortGroup muniversal 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/muniversal-1.0.tcl DEBUG: Sourcing PortGroup compiler_blacklist_versions 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/compiler_blacklist_versions-1.0.tcl DEBUG: compiler clang 425.0.28 not blacklisted because it doesn't match {clang == 211.10.1} DEBUG: universal variant already exists, so not adding the default one DEBUG: Running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Finished running callback portconfigure::add_automatic_compiler_dependencies DEBUG: Running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: Finished running callback portbuild::add_automatic_buildsystem_dependencies DEBUG: No need to upgrade! mpfr 3.1.6_0 >= mpfr 3.1.6_0 ---> Computing dependencies for cdo DEBUG: cdo has no conflicts DEBUG: Searching for dependency: clang-5.0 DEBUG: Found Dependency: receipt exists for clang-5.0 DEBUG: Searching for dependency: netcdf DEBUG: Found Dependency: receipt exists for netcdf DEBUG: Searching for dependency: hdf5 DEBUG: Found Dependency: receipt exists for hdf5 DEBUG: Searching for dependency: curl DEBUG: Found Dependency: receipt exists for curl DEBUG: Searching for dependency: udunits2 DEBUG: Found Dependency: receipt exists for udunits2 DEBUG: Searching for dependency: proj DEBUG: Found Dependency: receipt exists for proj DEBUG: Searching for dependency: fftw-3 DEBUG: Found Dependency: receipt exists for fftw-3 DEBUG: Searching for dependency: ecCodes DEBUG: Found Dependency: receipt exists for ecCodes DEBUG: Searching for dependency: libgcc DEBUG: Found Dependency: receipt exists for libgcc DEBUG: Executing org.macports.main (cdo) DEBUG: dropping privileges: euid changed to 502, egid changed to 501. DEBUG: archivefetch phase started at Thu Dec 28 18:41:58 CET 2017 ---> Fetching archive for cdo DEBUG: Executing proc-pre-org.macports.archivefetch-archivefetch-0 DEBUG: Active variants check for archivefetch-type install considers depends_lib depends_run: netcdf hdf5 curl udunits2 proj fftw-3 ecCodes libgcc DEBUG: Executing org.macports.archivefetch (cdo) DEBUG: euid/egid changed to: 0/0 DEBUG: chowned /opt/local/var/macports/incoming to macports DEBUG: euid/egid changed to: 502/501 ---> cdo-1.9.2_1+eccodes.darwin_11.x86_64.tbz2 doesn't seem to exist in /opt/local/var/macports/incoming/verified ---> Attempting to fetch cdo-1.9.2_1+eccodes.darwin_11.x86_64.tbz2 from ​https://packages.macports.org/cdo

% Total % Received % Xferd Average Speed Time Time Time Current

Dload Upload Total Spent Left Speed

0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0DEBUG: Fetching archive failed: The requested URL returned error: 404

---> Attempting to fetch cdo-1.9.2_1+eccodes.darwin_11.x86_64.tbz2 from ​http://lil.fr.packages.macports.org/cdo

% Total % Received % Xferd Average Speed Time Time Time Current

Dload Upload Total Spent Left Speed

0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0DEBUG: Fetching archive failed: The requested URL returned error: 404

---> Attempting to fetch cdo-1.9.2_1+eccodes.darwin_11.x86_64.tbz2 from ​http://mse.uk.packages.macports.org/sites/packages.macports.org/cdo

% Total % Received % Xferd Average Speed Time Time Time Current

Dload Upload Total Spent Left Speed

0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0

100 286 100 286 0 0 459 0 --:--:-- --:--:-- --:--:-- 459

0 286 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0DEBUG: Fetching archive failed: The requested URL returned error: 404

DEBUG: Privilege de-escalation not attempted as not running as root. DEBUG: fetch phase started at Thu Dec 28 18:42:03 CET 2017 ---> Fetching distfiles for cdo DEBUG: Executing proc-pre-org.macports.fetch-fetch-0 DEBUG: compilers.enforce_c list: DEBUG: compilers.enforce_fortran list: DEBUG: compilers.enforce_some_fortran list: DEBUG: Executing proc-pre-org.macports.fetch-fetch-1 DEBUG: Executing proc-pre-org.macports.fetch-fetch-2 DEBUG: mpi.enforce_variant list: hdf5 DEBUG: hdf5 is installed with the following variants: +cxx+hl DEBUG: required: , forbidden: DEBUG: accepted DEBUG: hdf5 is installed with the following variants: +cxx+hl DEBUG: required: mpich, forbidden: DEBUG: rejected, because required variant mpich is missing DEBUG: hdf5 is installed with the following variants: +cxx+hl DEBUG: required: mpich_devel, forbidden: DEBUG: rejected, because required variant mpich_devel is missing DEBUG: hdf5 is installed with the following variants: +cxx+hl DEBUG: required: openmpi, forbidden: DEBUG: rejected, because required variant openmpi is missing DEBUG: hdf5 is installed with the following variants: +cxx+hl DEBUG: required: openmpi_devel, forbidden: DEBUG: rejected, because required variant openmpi_devel is missing DEBUG: compilers.enforce_c list: hdf5 DEBUG: hdf5 is installed with the following variants: +cxx+hl DEBUG: required: , forbidden: DEBUG: accepted DEBUG: hdf5 is installed with the following variants: +cxx+hl DEBUG: required: clang33, forbidden: DEBUG: rejected, because required variant clang33 is missing DEBUG: hdf5 is installed with the following variants: +cxx+hl DEBUG: required: clang34, forbidden: DEBUG: rejected, because required variant clang34 is missing DEBUG: hdf5 is installed with the following variants: +cxx+hl DEBUG: required: clang35, forbidden: DEBUG: rejected, because required variant clang35 is missing DEBUG: hdf5 is installed with the following variants: +cxx+hl DEBUG: required: clang36, forbidden: DEBUG: rejected, because required variant clang36 is missing DEBUG: hdf5 is installed with the following variants: +cxx+hl DEBUG: required: clang37, forbidden: DEBUG: rejected, because required variant clang37 is missing DEBUG: hdf5 is installed with the following variants: +cxx+hl DEBUG: required: clang38, forbidden: DEBUG: rejected, because required variant clang38 is missing DEBUG: hdf5 is installed with the following variants: +cxx+hl DEBUG: required: clang39, forbidden: DEBUG: rejected, because required variant clang39 is missing DEBUG: hdf5 is installed with the following variants: +cxx+hl DEBUG: required: clang40, forbidden: DEBUG: rejected, because required variant clang40 is missing DEBUG: hdf5 is installed with the following variants: +cxx+hl DEBUG: required: clang50, forbidden: DEBUG: rejected, because required variant clang50 is missing DEBUG: hdf5 is installed with the following variants: +cxx+hl DEBUG: required: gcc44, forbidden: DEBUG: rejected, because required variant gcc44 is missing DEBUG: hdf5 is installed with the following variants: +cxx+hl DEBUG: required: gcc45, forbidden: DEBUG: rejected, because required variant gcc45 is missing DEBUG: hdf5 is installed with the following variants: +cxx+hl DEBUG: required: gcc46, forbidden: DEBUG: rejected, because required variant gcc46 is missing DEBUG: hdf5 is installed with the following variants: +cxx+hl DEBUG: required: gcc47, forbidden: DEBUG: rejected, because required variant gcc47 is missing DEBUG: hdf5 is installed with the following variants: +cxx+hl DEBUG: required: gcc48, forbidden: DEBUG: rejected, because required variant gcc48 is missing DEBUG: hdf5 is installed with the following variants: +cxx+hl DEBUG: required: gcc49, forbidden: DEBUG: rejected, because required variant gcc49 is missing DEBUG: hdf5 is installed with the following variants: +cxx+hl DEBUG: required: gcc5, forbidden: DEBUG: rejected, because required variant gcc5 is missing DEBUG: hdf5 is installed with the following variants: +cxx+hl DEBUG: required: gcc6, forbidden: DEBUG: rejected, because required variant gcc6 is missing DEBUG: hdf5 is installed with the following variants: +cxx+hl DEBUG: required: gcc7, forbidden: DEBUG: rejected, because required variant gcc7 is missing DEBUG: hdf5 is installed with the following variants: +cxx+hl DEBUG: required: llvm, forbidden: DEBUG: rejected, because required variant llvm is missing DEBUG: Executing org.macports.fetch (cdo) DEBUG: Privilege de-escalation not attempted as not running as root. DEBUG: checksum phase started at Thu Dec 28 18:42:03 CET 2017 ---> Verifying checksums for cdo DEBUG: Executing org.macports.checksum (cdo) ---> Checksumming cdo-1.9.2.tar.gz DEBUG: Calculated (rmd160) is 1626ab245e61afb157e975aed64e4c5af99a9877 DEBUG: Correct (rmd160) checksum for cdo-1.9.2.tar.gz DEBUG: Calculated (sha256) is d1c5092167034a48e4b8ada24cf78a1d4b84e364ffbb08b9ca70d13f428f300c DEBUG: Correct (sha256) checksum for cdo-1.9.2.tar.gz DEBUG: Privilege de-escalation not attempted as not running as root. DEBUG: extract phase started at Thu Dec 28 18:42:03 CET 2017 ---> Extracting cdo DEBUG: Executing org.macports.extract (cdo) ---> Extracting cdo-1.9.2.tar.gz DEBUG: setting option extract.args to '/opt/local/var/macports/distfiles/cdo/cdo-1.9.2.tar.gz' DEBUG: Environment: CC_PRINT_OPTIONS='YES' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/.CC_PRINT_OPTIONS' CPATH='/opt/local/include' LIBRARY_PATH='/opt/local/lib' MACOSX_DEPLOYMENT_TARGET='10.7' Executing: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work" && /usr/bin/gzip -dc '/opt/local/var/macports/distfiles/cdo/cdo-1.9.2.tar.gz' | /usr/bin/gnutar --no-same-owner -xf - DEBUG: system: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work" && /usr/bin/gzip -dc '/opt/local/var/macports/distfiles/cdo/cdo-1.9.2.tar.gz' | /usr/bin/gnutar --no-same-owner -xf - DEBUG: euid/egid changed to: 0/0 DEBUG: chowned /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work to macports DEBUG: euid/egid changed to: 502/501 DEBUG: Privilege de-escalation not attempted as not running as root. DEBUG: patch phase started at Thu Dec 28 18:42:04 CET 2017 DEBUG: Executing org.macports.patch (cdo) DEBUG: Privilege de-escalation not attempted as not running as root. DEBUG: configure phase started at Thu Dec 28 18:42:04 CET 2017 ---> Configuring cdo DEBUG: Preferred compilers: clang llvm-gcc-4.2 macports-clang-3.4 macports-llvm-gcc-4.2 apple-gcc-4.2 DEBUG: Using compiler 'MacPorts Clang 5.0' DEBUG: Executing proc-pre-org.macports.configure-configure-0 DEBUG: Active variants check for source-type install considers depends_fetch depends_extract depends_lib depends_build depends_run: netcdf hdf5 curl udunits2 proj fftw-3 ecCodes libgcc clang-5.0 DEBUG: Executing org.macports.configure (cdo) DEBUG: Environment: CC='/opt/local/bin/clang-mp-5.0' CC_PRINT_OPTIONS='YES' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/.CC_PRINT_OPTIONS' CFLAGS='-pipe -Os -arch x86_64' CPATH='/opt/local/include' CPPFLAGS='-I/opt/local/include -I/opt/local/include/udunits2' CXX='/opt/local/bin/clang++-mp-5.0' CXXFLAGS='-pipe -Os -D_GLIBCXX_USE_CXX11_ABI=0 -stdlib=macports-libstdc++ -arch x86_64' F77FLAGS='-m64' F90FLAGS='-pipe -Os -m64' FCFLAGS='-pipe -Os -m64' FFLAGS='-pipe -Os' INSTALL='/usr/bin/install -c' LDFLAGS='-L/opt/local/lib -Wl,-headerpad_max_install_names -lhdf5 -lpng -lopenjpeg -arch x86_64' LIBRARY_PATH='/opt/local/lib' MACOSX_DEPLOYMENT_TARGET='10.7' OBJC='/opt/local/bin/clang-mp-5.0' OBJCFLAGS='-pipe -Os -arch x86_64' OBJCXX='/opt/local/bin/clang++-mp-5.0' OBJCXXFLAGS='-pipe -Os -D_GLIBCXX_USE_CXX11_ABI=0 -stdlib=macports-libstdc++ -arch x86_64' Executing: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.2" && ./configure --prefix=/opt/local --with-netcdf=/opt/local --disable-dependency-tracking --disable-openmp --with-proj=/opt/local --with-hdf5=/opt/local --with-udunits2=/opt/local --with-fftw3 --with-curl=/opt/local --with-zlib=/opt/local --with-jasper=/opt/local --with-eccodes=/opt/local DEBUG: system: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.2" && ./configure --prefix=/opt/local --with-netcdf=/opt/local --disable-dependency-tracking --disable-openmp --with-proj=/opt/local --with-hdf5=/opt/local --with-udunits2=/opt/local --with-fftw3 --with-curl=/opt/local --with-zlib=/opt/local --with-jasper=/opt/local --with-eccodes=/opt/local checking build system type... x86_64-apple-darwin11.4.2 checking host system type... x86_64-apple-darwin11.4.2 checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... config/install-sh -c -d checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no checking for style of include used by make... GNU checking for gcc... /opt/local/bin/clang-mp-5.0 checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether /opt/local/bin/clang-mp-5.0 accepts -g... yes checking for /opt/local/bin/clang-mp-5.0 option to accept ISO C89... none needed checking whether /opt/local/bin/clang-mp-5.0 understands -c and -o together... yes checking dependency style of /opt/local/bin/clang-mp-5.0... none checking for ar... ar checking the archiver (ar) interface... ar configure: setting up libtool checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by /opt/local/bin/clang-mp-5.0... /opt/local/libexec/llvm-5.0/bin/ld checking if the linker (/opt/local/libexec/llvm-5.0/bin/ld) is GNU ld... no checking for BSD- or MS-compatible name lister (nm)... /opt/local/bin/nm checking the name lister (/opt/local/bin/nm) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 196608 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking how to convert x86_64-apple-darwin11.4.2 file names to x86_64-apple-darwin11.4.2 format... func_convert_file_noop checking how to convert x86_64-apple-darwin11.4.2 file names to toolchain format... func_convert_file_noop checking for /opt/local/libexec/llvm-5.0/bin/ld option to reload object files... -r checking for objdump... no checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for archiver @FILE support... no checking for strip... strip checking for ranlib... ranlib checking command to parse /opt/local/bin/nm output from /opt/local/bin/clang-mp-5.0 object... ok checking for sysroot... no checking for mt... no checking if : is a manifest tool... no checking for dsymutil... dsymutil checking for nmedit... nmedit checking for lipo... lipo checking for otool... otool checking for otool64... no checking for -single_module linker flag... yes checking for -exported_symbols_list linker flag... yes checking for -force_load linker flag... yes checking how to run the C preprocessor... /opt/local/bin/clang-mp-5.0 -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if /opt/local/bin/clang-mp-5.0 supports -fno-rtti -fno-exceptions... yes checking for /opt/local/bin/clang-mp-5.0 option to produce PIC... -fno-common -DPIC checking if /opt/local/bin/clang-mp-5.0 PIC flag -fno-common -DPIC works... yes checking if /opt/local/bin/clang-mp-5.0 static flag -static works... no checking if /opt/local/bin/clang-mp-5.0 supports -c -o file.o... yes checking if /opt/local/bin/clang-mp-5.0 supports -c -o file.o... (cached) yes checking whether the /opt/local/bin/clang-mp-5.0 linker (/opt/local/libexec/llvm-5.0/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... darwin11.4.2 dyld checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for bash... /bin/sh checking for gcc... (cached) /opt/local/bin/clang-mp-5.0 checking for g++... /opt/local/bin/clang++-mp-5.0 checking for /opt/local/bin/clang-mp-5.0 option to accept ISO C99... none needed checking whether we are using the GNU C++ compiler... yes checking whether /opt/local/bin/clang++-mp-5.0 accepts -g... yes checking dependency style of /opt/local/bin/clang++-mp-5.0... none checking how to run the C++ preprocessor... /opt/local/bin/clang++-mp-5.0 -E checking for ld used by /opt/local/bin/clang++-mp-5.0... /opt/local/libexec/llvm-5.0/bin/ld checking if the linker (/opt/local/libexec/llvm-5.0/bin/ld) is GNU ld... no checking whether the /opt/local/bin/clang++-mp-5.0 linker (/opt/local/libexec/llvm-5.0/bin/ld) supports shared libraries... yes checking for /opt/local/bin/clang++-mp-5.0 option to produce PIC... -fno-common -DPIC checking if /opt/local/bin/clang++-mp-5.0 PIC flag -fno-common -DPIC works... yes checking if /opt/local/bin/clang++-mp-5.0 static flag -static works... no checking if /opt/local/bin/clang++-mp-5.0 supports -c -o file.o... yes checking if /opt/local/bin/clang++-mp-5.0 supports -c -o file.o... (cached) yes checking whether the /opt/local/bin/clang++-mp-5.0 linker (/opt/local/libexec/llvm-5.0/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... darwin11.4.2 dyld checking how to hardcode library paths into programs... immediate checking for g77... no checking for xlf... no checking for f77... no checking for frt... no checking for pgf77... no checking for cf77... no checking for fort77... no checking for fl32... no checking for af77... no checking for xlf90... no checking for f90... no checking for pgf90... no checking for pghpf... no checking for epcf90... no checking for gfortran... no checking for g95... no checking for xlf95... no checking for f95... no checking for fort... no checking for ifort... no checking for ifc... no checking for efc... no checking for pgfortran... no checking for pgf95... no checking for lf95... no checking for ftn... no checking whether we are using the GNU Fortran 77 compiler... no checking whether accepts -g... no checking for C/C++ restrict keyword... restrict checking whether /opt/local/bin/clang++-mp-5.0 supports C++11 features by default... no checking whether /opt/local/bin/clang++-mp-5.0 supports C++11 features with -std=gnu++11... yes checking for ar... (cached) ar checking for ld... /opt/local/libexec/llvm-5.0/bin/ld checking for nm... /opt/local/bin/nm checking for ar... (cached) ar checking for as... as checking for dlltool... false checking for objdump... false checking for strip... (cached) strip checking for ranlib... (cached) ranlib checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no checking for stdlib.h... (cached) yes checking for unistd.h... (cached) yes checking for sys/param.h... yes checking for getpagesize... yes checking for working mmap... yes checking for malloc in -lmalloc... no checking for struct stat.st_blksize... yes checking sys/resource.h usability... yes checking sys/resource.h presence... yes checking for sys/resource.h... yes checking sys/times.h usability... yes checking sys/times.h presence... yes checking for sys/times.h... yes checking malloc.h usability... no checking malloc.h presence... no checking for malloc.h... no checking glob.h usability... yes checking glob.h presence... yes checking for glob.h... yes checking fnmatch.h usability... yes checking fnmatch.h presence... yes checking for fnmatch.h... yes checking wordexp.h usability... yes checking wordexp.h presence... yes checking for wordexp.h... yes checking execinfo.h usability... yes checking execinfo.h presence... yes checking for execinfo.h... yes checking for mallinfo... no checking for backtrace... yes checking for getrlimit... yes checking for gethostname... yes checking for floor in -lm... yes checking whether isnan is declared... yes checking for sqrtl... yes checking for feenableexcept... no checking for fenv_t.control... yes checking for fenv_t.mxcsr... yes checking C preprocessor flags for Fortran calling convention cfortran.h... (probed) checking for nearpt3 support... checking for DATA support... checking if compiler needs -Werror to reject unknown flags... yes checking whether pthreads work with -pthread... yes checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE checking if more special flags are required for pthreads... -D_THREAD_SAFE checking for PTHREAD_PRIO_INHERIT... yes CC:/opt/local/bin/clang-mp-5.0 CFLAGS:-pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread LIBS: -lm checking for szlib library... suppressed checking hdf5.h usability... yes checking hdf5.h presence... yes checking for hdf5.h... yes checking for library containing H5Fopen... none required checking for library containing H5DSis_scale... -lhdf5_hl checking netcdf.h usability... yes checking netcdf.h presence... yes checking for netcdf.h... yes checking for library containing nc_open... -lnetcdf checking nc-config script... checking for nc-config... /opt/local/bin/nc-config checking netcdf's OpenDAP support... yes checking netcdf's nc2 support... yes checking netcdf's nc4 support... yes checking netcdf's nc4/hdf5 support... yes checking for library containing H5TS_mutex_lock... no checking udunits2.h usability... yes checking udunits2.h presence... yes checking for udunits2.h... yes checking udunits2/udunits2.h usability... yes checking udunits2/udunits2.h presence... yes checking for udunits2/udunits2.h... yes checking for library containing ut_parse... -ludunits2 checking for the CMOR library... suppressed checking grib_api.h usability... yes checking grib_api.h presence... yes checking for grib_api.h... yes checking for library containing grib_get_message... -leccodes checking for the GRIB_API library... suppressed checking for GRIB support... yes checking for CGRIBEX support... yes checking for SERVICE support... yes checking for EXTRA support... yes checking for IEG support... yes checking for FFTW3 support... checking fftw3.h usability... yes checking fftw3.h presence... yes checking for fftw3.h... yes checking for library containing fftw_cleanup... -lfftw3 checking proj_api.h usability... yes checking proj_api.h presence... yes checking for proj_api.h... yes checking for library containing pj_init... -lproj checking curl/curl.h usability... yes checking curl/curl.h presence... yes checking for curl/curl.h... yes checking for library containing curl_global_init... -lcurl checking for MAGICS library... suppressed checking for XML2 library... suppressed checking for build a separate CDI library and link CDO to it... no checking for building an additional static CDO binary... no checking for HIRLAM extensions... no checking if x86/amd64 assembler speaks SSE4.2... yes checking if x86/amd64 assembler speaks AVX... yes checking if x86/amd64 assembler speaks AVX2... yes checking for gawk... (cached) gawk checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating test/File.test config.status: creating test/Read_grib.test config.status: creating test/Read_netcdf.test config.status: creating test/Copy_netcdf.test config.status: creating test/Comp.test config.status: creating test/Compc.test config.status: creating test/Cat.test config.status: creating test/Gridarea.test config.status: creating test/Genweights.test config.status: creating test/Remap.test config.status: creating test/Remap2.test config.status: creating test/Remapeta.test config.status: creating test/EOF.test config.status: creating test/Select.test config.status: creating test/Spectral.test config.status: creating test/Vertint.test config.status: creating test/Timstat.test config.status: creating test/Timselstat.test config.status: creating test/Seasstat.test config.status: creating test/Runstat.test config.status: creating test/Multiyearstat.test config.status: creating test/Ydrunstat.test config.status: creating test/Gridboxstat.test config.status: creating test/Vertstat.test config.status: creating test/Fldstat.test config.status: creating test/Fldpctl.test config.status: creating test/Ensstat.test config.status: creating test/Enspctl.test config.status: creating test/Merstat.test config.status: creating test/Zonstat.test config.status: creating test/Mergetime.test config.status: creating test/Afterburner.test config.status: creating test/Detrend.test config.status: creating test/Arithc.test config.status: creating test/Arith.test config.status: creating test/Expr.test config.status: creating test/Gradsdes.test config.status: creating test/Collgrid.test config.status: creating test/threads.test config.status: creating test/tsformat.test config.status: creating test/wildcard.test config.status: creating test/MapReduce.test config.status: creating test/Ninfo.test config.status: creating Makefile config.status: creating src/lib/ncl/Makefile config.status: creating src/Makefile config.status: creating contrib/Makefile config.status: creating test/Makefile config.status: creating test/data/Makefile config.status: creating cdo.spec config.status: creating cdo.settings config.status: creating src/config.h config.status: executing depfiles commands config.status: executing libtool commands

configuring in libcdi (/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.2/libcdi)

configure: running /bin/sh ./configure --disable-option-checking '--prefix=/opt/local' '--with-netcdf=/opt/local' '--disable-dependency-tracking' '--disable-openmp' '--with-proj=/opt/local' '--with-hdf5=/opt/local' '--with-udunits2=/opt/local' '--with-fftw3' '--with-curl=/opt/local' '--with-zlib=/opt/local' '--with-jasper=/opt/local' '--with-eccodes=/opt/local' 'CC=/opt/local/bin/clang-mp-5.0' 'CFLAGS=-pipe -Os -arch x86_64' 'LDFLAGS=-L/opt/local/lib -Wl,-headerpad_max_install_names -lhdf5 -lpng -lopenjpeg -arch x86_64' 'CPPFLAGS=-I/opt/local/include -I/opt/local/include/udunits2' 'CXX=/opt/local/bin/clang++-mp-5.0' 'CXXFLAGS=-pipe -Os -D_GLIBCXX_USE_CXX11_ABI=0 -stdlib=macports-libstdc++ -arch x86_64' 'FFLAGS=-pipe -Os' --cache-file=/dev/null --srcdir=. configuring cdi 1.9.2 checking build system type... x86_64-apple-darwin11.4.2 checking host system type... x86_64-apple-darwin11.4.2 checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... config/install-sh -c -d checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no checking for gcc... /opt/local/bin/clang-mp-5.0 checking for style of include used by make... GNU checking for gcc... (cached) /opt/local/bin/clang-mp-5.0 checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether /opt/local/bin/clang-mp-5.0 accepts -g... yes checking for /opt/local/bin/clang-mp-5.0 option to accept ISO C89... none needed checking whether /opt/local/bin/clang-mp-5.0 understands -c and -o together... yes checking dependency style of /opt/local/bin/clang-mp-5.0... none checking for /opt/local/bin/clang-mp-5.0 option to accept ISO C99... none needed checking For conformance to POSIX.1-2001.... yes checking for C/C++ restrict keyword... restrict checking whether we are using the GNU Fortran compiler... no checking whether no accepts -g... no checking for g77... no checking for xlf... no checking for f77... no checking for frt... no checking for pgf77... no checking for cf77... no checking for fort77... no checking for fl32... no checking for af77... no checking for xlf90... no checking for f90... no checking for pgf90... no checking for pghpf... no checking for epcf90... no checking for gfortran... no checking for g95... no checking for xlf95... no checking for f95... no checking for fort... no checking for ifort... no checking for ifc... no checking for efc... no checking for pgfortran... no checking for pgf95... no checking for lf95... no checking for ftn... no checking whether we are using the GNU Fortran 77 compiler... no checking whether accepts -g... no checking whether we are using the GNU C++ compiler... yes checking whether /opt/local/bin/clang++-mp-5.0 accepts -g... yes checking dependency style of /opt/local/bin/clang++-mp-5.0... none configure: setting up libtool checking any compiler has problems building shared objects... no checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by /opt/local/bin/clang-mp-5.0... /opt/local/libexec/llvm-5.0/bin/ld checking if the linker (/opt/local/libexec/llvm-5.0/bin/ld) is GNU ld... no checking for BSD- or MS-compatible name lister (nm)... /opt/local/bin/nm checking the name lister (/opt/local/bin/nm) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 196608 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking how to convert x86_64-apple-darwin11.4.2 file names to x86_64-apple-darwin11.4.2 format... func_convert_file_noop checking how to convert x86_64-apple-darwin11.4.2 file names to toolchain format... func_convert_file_noop checking for /opt/local/libexec/llvm-5.0/bin/ld option to reload object files... -r checking for objdump... no checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... no checking for strip... strip checking for ranlib... ranlib checking command to parse /opt/local/bin/nm output from /opt/local/bin/clang-mp-5.0 object... ok checking for sysroot... no checking for mt... no checking if : is a manifest tool... no checking for dsymutil... dsymutil checking for nmedit... nmedit checking for lipo... lipo checking for otool... otool checking for otool64... no checking for -single_module linker flag... yes checking for -exported_symbols_list linker flag... yes checking for -force_load linker flag... yes checking how to run the C preprocessor... /opt/local/bin/clang-mp-5.0 -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if /opt/local/bin/clang-mp-5.0 supports -fno-rtti -fno-exceptions... yes checking for /opt/local/bin/clang-mp-5.0 option to produce PIC... -fno-common -DPIC checking if /opt/local/bin/clang-mp-5.0 PIC flag -fno-common -DPIC works... yes checking if /opt/local/bin/clang-mp-5.0 static flag -static works... no checking if /opt/local/bin/clang-mp-5.0 supports -c -o file.o... yes checking if /opt/local/bin/clang-mp-5.0 supports -c -o file.o... (cached) yes checking whether the /opt/local/bin/clang-mp-5.0 linker (/opt/local/libexec/llvm-5.0/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... darwin11.4.2 dyld checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... /opt/local/bin/clang++-mp-5.0 -E checking for ld used by /opt/local/bin/clang++-mp-5.0... /opt/local/libexec/llvm-5.0/bin/ld checking if the linker (/opt/local/libexec/llvm-5.0/bin/ld) is GNU ld... no checking whether the /opt/local/bin/clang++-mp-5.0 linker (/opt/local/libexec/llvm-5.0/bin/ld) supports shared libraries... yes checking for /opt/local/bin/clang++-mp-5.0 option to produce PIC... -fno-common -DPIC checking if /opt/local/bin/clang++-mp-5.0 PIC flag -fno-common -DPIC works... yes checking if /opt/local/bin/clang++-mp-5.0 static flag -static works... no checking if /opt/local/bin/clang++-mp-5.0 supports -c -o file.o... yes checking if /opt/local/bin/clang++-mp-5.0 supports -c -o file.o... (cached) yes checking whether the /opt/local/bin/clang++-mp-5.0 linker (/opt/local/libexec/llvm-5.0/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... darwin11.4.2 dyld checking how to hardcode library paths into programs... immediate configure: creating ./config.lt config.lt: creating libtool checking whether byte ordering is bigendian... no checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no checking for stdlib.h... (cached) yes checking for unistd.h... (cached) yes checking for sys/param.h... yes checking for getpagesize... yes checking for working mmap... yes checking for malloc in -lmalloc... no checking for struct stat.st_blksize... yes checking malloc.h usability... no checking malloc.h presence... no checking for malloc.h... no checking uuid.h usability... no checking uuid.h presence... no checking for uuid.h... no checking uuid/uuid.h usability... yes checking uuid/uuid.h presence... yes checking for uuid/uuid.h... yes checking execinfo.h usability... yes checking execinfo.h presence... yes checking for execinfo.h... yes checking size parameter type for backtrace()... int checking for library containing backtrace... none required checking for mallinfo... no checking for getline... yes checking for uuid_generate in -luuid... no checking for uuid_create... no checking whether isnan is declared... yes checking whether _SC_LARGE_PAGESIZE is declared... no checking whether PAGESIZE is declared... no checking whether PAGE_SIZE is declared... no checking whether _SC_PAGE_SIZE is declared... yes checking whether _SC_PAGESIZE is declared... yes checking whether _PC_REC_XFER_ALIGN is declared... yes checking whether POSIX_REC_XFER_ALIGN is declared... no checking whether builtin_ctz is declared... yes checking for floor in -lm... yes checking if compiler needs -Werror to reject unknown flags... yes checking whether pthreads work with -pthread... yes checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE checking if more special flags are required for pthreads... -D_THREAD_SAFE checking for PTHREAD_PRIO_INHERIT... yes CC:/opt/local/bin/clang-mp-5.0 CFLAGS:-pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread LIBS: -lm checking for szlib library... suppressed checking netcdf.h usability... yes checking netcdf.h presence... yes checking for netcdf.h... yes checking for library containing nc_open... -lnetcdf checking nc-config script... checking for nc-config... /opt/local/bin/nc-config checking netcdf's OpenDAP support... yes checking netcdf's nc2 support... yes checking netcdf's nc4 support... yes checking netcdf's nc4/hdf5 support... yes checking for library containing H5TS_mutex_lock... no checking for library containing H5get_libversion... none required checking grib_api.h usability... yes checking grib_api.h presence... yes checking for grib_api.h... yes checking for library containing grib_get_message... -leccodes checking for the GRIB_API library... suppressed checking for GRIB support... yes checking for CGRIBEX support... yes checking for SERVICE support... yes checking for EXTRA support... yes checking for IEG support... yes checking for building an additional static CDI binary... no checking for HIRLAM extensions... no checking for grib_get_length... yes checking for pkg-config... /opt/local/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for ruby... ruby checking C preprocessor flags for Fortran calling convention cfortran.h... (probed) checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating tests/test_cksum_grib config.status: creating tests/test_cksum_nc config.status: creating tests/test_cksum_nc2 config.status: creating tests/test_cksum_nc4 config.status: creating tests/test_cksum_extra config.status: creating tests/test_cksum_service config.status: creating tests/test_cksum_ieg config.status: creating tests/test_chunk_cksum config.status: creating tests/test_f2003 config.status: creating tests/pio_write_run config.status: creating tests/pio_write_deco2d_run config.status: creating tests/pio_cksum_mpinonb config.status: creating tests/pio_cksum_mpi_fw_ordered config.status: creating tests/pio_cksum_mpi_fw_at_all config.status: creating tests/pio_cksum_mpi_fw_at_reblock config.status: creating tests/pio_cksum_fpguard config.status: creating tests/pio_cksum_asynch config.status: creating tests/pio_cksum_writer config.status: creating tests/pio_cksum_cdf config.status: creating tests/test_resource_copy_mpi_run config.status: creating tests/test_cdf_transformation config.status: creating tests/test_cdf_const config.status: creating tables/gen_tableheaderfile config.status: creating util/serialrun config.status: creating Makefile config.status: creating src/Makefile config.status: creating interfaces/Makefile config.status: creating app/Makefile config.status: creating tests/Makefile config.status: creating examples/Makefile config.status: creating cdi.settings config.status: creating examples/pio/Makefile config.status: creating src/pkgconfig/cdi.pc config.status: creating src/pkgconfig/cdipio.pc config.status: creating src/config.h config.status: executing depfiles commands config.status: executing libtool commands configure: CDI is configured with the following options: config.status: creating cdi.settings {

"build" : {

"tools" : {

"CC" : "/opt/local/bin/clang-mp-5.0", "CPP" : "/opt/local/bin/clang-mp-5.0 -E", "CPPFLAGS" : "-I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 ", "CFLAGS" : "-pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread", "LDFLAGS" : "-L/opt/local/lib -L/opt/local/lib -L/opt/local/lib -Wl,-headerpad_max_install_names -lhdf5 -lpng -lopenjpeg -arch x86_64", "LIBS" : "-leccodes -lnetcdf -lm ", "FC" : "no", "F77" : "", "FCFLAGS" : "-pipe -Os -m64", "LD" : "/opt/local/libexec/llvm-5.0/bin/ld", "NM" : "/opt/local/bin/nm", "AR" : "ar", "AS" : "@AS@", "DLLTOOL" : "false", "OBJDUMP" : "false", "STRIP" : "strip", "RANLIB" : "ranlib", "INSTALL" : "/usr/bin/install -c"

}, "libraries" : {

"threads" : {

"lib" : "", "include" : ""

}, "mpi" : {

"libs" : "", "cflags" : "", "fclibs" : "", "fcflags" : ""

}, "szlib" : {

"lib" : "", "include" : ""

}, "netcdf" : {

"lib" : " -L/opt/local/lib -lnetcdf", "include" : " -I/opt/local/include"

}, "grib_api" : {

"lib" : "", "include" : ""

} "eccodes" : {

"lib" : " -L/opt/local/lib -leccodes", "include" : " -I/opt/local/include"

}

} "platform" : {

"USER_NAME" : "root", "HOST_NAME" : "Sibylles-MacBook-Air.local", "SYSTEM_TYPE" : "x86_64-apple-darwin11.4.2"

},

}, "features" : {

"enable_cdi_lib" : false, "grib" : "yes", "cgribex" : "yes", "service" : "yes", "extra" : "yes", "ieg" : "yes", "enable_mpi" : false, "parallel_nc4" : 0, "enable_python" : false, "enable_ruby" : false

}

} configure:

Configuration completed.

You can now say 'make' to compile the CDI package and 'make install' to install it afterwards.

configure: CDO is configured with the following options: {

"build" : {

"tools" : {

"CXX" : "/opt/local/bin/clang++-mp-5.0 -std=gnu++11", "CC" : "/opt/local/bin/clang-mp-5.0", "CPP" : "/opt/local/bin/clang-mp-5.0 -E", "CPPFLAGS" : "-I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2", "CXXFLAGS" : "-pipe -Os -D_GLIBCXX_USE_CXX11_ABI=0 -stdlib=macports-libstdc++ -arch x86_64 -D_THREAD_SAFE -pthread", "CFLAGS" : "-pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread", "F77" : "", "FFLAGS" : "-pipe -Os", "LDFLAGS" : "-L/opt/local/lib -L/opt/local/lib -L/opt/local/lib -L/opt/local/lib -L/opt/local/lib -L/opt/local/lib -Wl,-headerpad_max_install_names -lhdf5 -lpng -lopenjpeg -arch x86_64 -L/opt/local/lib", "LIBS" : "-lcurl -lproj -lfftw3 -leccodes -ludunits2 -lnetcdf -lhdf5_hl -lm ", "FCFLAGS" : "@FCFLAGS@", "INCLUDES" : "@INCLUDES@", "LD" : "/opt/local/libexec/llvm-5.0/bin/ld", "NM" : "/opt/local/bin/nm", "AR" : "ar", "AS" : "as", "DLLTOOL" : "false", "OBJDUMP" : "false", "STRIP" : "strip", "RANLIB" : "ranlib", "INSTALL" : "/usr/bin/install -c",

}, "libraries" : {

"threads" : {

"lib" : "", "include" : ""

}, "szlib" : {

"lib" : "", "include" : ""

}, "hdf5" : {

"lib" : " -L/opt/local/lib -lhdf5", "include" : " -I/opt/local/include"

}, "netcdf" : {

"lib" : " -L/opt/local/lib -lnetcdf", "include" : " -I/opt/local/include"

}, "udunits2" : {

"lib" : " -L/opt/local/lib -ludunits2", "include" : " -I/opt/local/include"

}, "proj" : {

"lib" : " -L/opt/local/lib -lproj", "include" : " -I/opt/local/include"

}, "magics" : {

"lib" : "", "include" : ""

}

}, "platform" : {

"USER_NAME" : "root", "HOST_NAME" : "Sibylles-MacBook-Air.local", "SYSTEM_TYPE" : "x86_64-apple-darwin11.4.2"

},

}, "features" : {

"enable_cdi_lib" : false, "enable_data" : true, "enable_fortran" : true, "fortran_works" : "yes",

}

} configure:

Configuration completed.

You can now say 'make' to compile the CDO package and 'make install' to install it afterwards.

DEBUG: Privilege de-escalation not attempted as not running as root. DEBUG: build phase started at Thu Dec 28 18:42:56 CET 2017 ---> Building cdo DEBUG: Executing org.macports.build (cdo) DEBUG: Environment: CC_PRINT_OPTIONS='YES' CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/.CC_PRINT_OPTIONS' CPATH='/opt/local/include' LIBRARY_PATH='/opt/local/lib' MACOSX_DEPLOYMENT_TARGET='10.7' Executing: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.2" && /usr/bin/make -j4 -w all DEBUG: system: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.2" && /usr/bin/make -j4 -w all make: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.2' Making all in libcdi make[1]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.2/libcdi' Making all in src make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.2/libcdi/src' /usr/bin/make all-am make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.2/libcdi/src' /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o resource_unpack.lo resource_unpack.c /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o basetime.lo basetime.c /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o binary.lo binary.c /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o calendar.lo calendar.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c basetime.c -fno-common -DPIC -o .libs/basetime.o libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c resource_unpack.c -fno-common -DPIC -o .libs/resource_unpack.o libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c calendar.c -fno-common -DPIC -o .libs/calendar.o libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c binary.c -fno-common -DPIC -o .libs/binary.o libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c basetime.c -o basetime.o >/dev/null 2>&1 libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c calendar.c -o calendar.o >/dev/null 2>&1 libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c binary.c -o binary.o >/dev/null 2>&1 libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c resource_unpack.c -o resource_unpack.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o cdf.lo cdf.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cdf.c -fno-common -DPIC -o .libs/cdf.o /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o cdf_int.lo cdf_int.c /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o cdf_util.lo cdf_util.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cdf_int.c -fno-common -DPIC -o .libs/cdf_int.o /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o cdi_error.lo cdi_error.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cdf_util.c -fno-common -DPIC -o .libs/cdf_util.o libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cdi_error.c -fno-common -DPIC -o .libs/cdi_error.o libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cdf.c -o cdf.o >/dev/null 2>&1 libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cdi_error.c -o cdi_error.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o cdi_util.lo cdi_util.c /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o cgribexlib.lo cgribexlib.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 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-I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o dmemory.lo dmemory.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cdf_int.c -o cdf_int.o >/dev/null 2>&1 libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c dmemory.c -fno-common -DPIC -o .libs/dmemory.o /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o cksum.lo cksum.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cksum.c -fno-common -DPIC -o .libs/cksum.o libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cksum.c -o cksum.o >/dev/null 2>&1 libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c dmemory.c -o dmemory.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o cdi_cksum.lo cdi_cksum.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cdi_cksum.c -fno-common -DPIC -o .libs/cdi_cksum.o libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cdi_cksum.c -o cdi_cksum.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o error.lo error.c /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o extralib.lo extralib.c /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o file.lo file.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c error.c -fno-common -DPIC -o .libs/error.o libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c extralib.c -fno-common -DPIC -o .libs/extralib.o libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c file.c -fno-common -DPIC -o .libs/file.o libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c error.c -o error.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o gaussgrid.lo gaussgrid.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c gaussgrid.c -fno-common -DPIC -o .libs/gaussgrid.o libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c extralib.c -o extralib.o >/dev/null 2>&1 libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c gaussgrid.c -o gaussgrid.o >/dev/null 2>&1 libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c file.c -o file.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o gribapi.lo gribapi.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c gribapi.c -fno-common -DPIC -o .libs/gribapi.o libtool: 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libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c ieglib.c -fno-common -DPIC -o .libs/ieglib.o /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o input_file.lo input_file.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c input_file.c -fno-common -DPIC -o .libs/input_file.o libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c ieglib.c -o ieglib.o >/dev/null 2>&1 libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c input_file.c -o input_file.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o institution.lo institution.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c institution.c -fno-common -DPIC -o .libs/institution.o /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe 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servicelib.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c servicelib.c -fno-common -DPIC -o .libs/servicelib.o libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c servicelib.c -o servicelib.o >/dev/null 2>&1 libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c resource_handle.c -o resource_handle.o >/dev/null 2>&1 libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c grid.c -o grid.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o stream_cdf_i.lo stream_cdf_i.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_cdf_i.c -fno-common -DPIC -o .libs/stream_cdf_i.o /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o stream_cdf_o.lo stream_cdf_o.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_cdf_o.c -fno-common -DPIC -o .libs/stream_cdf_o.o libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cgribexlib.c -o cgribexlib.o >/dev/null 2>&1 libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_cdf_o.c -o stream_cdf_o.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o stream_cdf_time.lo stream_cdf_time.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_cdf_time.c -fno-common -DPIC -o .libs/stream_cdf_time.o libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_cdf_time.c -o stream_cdf_time.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o stream_cgribex.lo stream_cgribex.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_cgribex.c -fno-common -DPIC -o .libs/stream_cgribex.o /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o stream_ext.lo stream_ext.c stream_cgribex.c:194:22: warning: taking the absolute value of unsigned type 'unsigned long' has no effect [-Wabsolute-value]

if ( abs(ISEC2_LastLon - (ISEC2_FirstLon+ISEC2_LonIncr*(grid->x.size-1))) <= 2 )

stream_cgribex.c:194:22: note: remove the call to 'abs' since unsigned values cannot be negative

if ( abs(ISEC2_LastLon - (ISEC2_FirstLon+ISEC2_LonIncr*(grid->x.size-1))) <= 2 )

stream_cgribex.c:227:22: warning: taking the absolute value of unsigned type 'unsigned long' has no effect [-Wabsolute-value]

if ( abs(ISEC2_LastLat - (ISEC2_FirstLat+ISEC2_LatIncr*(grid->y.size-1))) <= 2 )

stream_cgribex.c:227:22: note: remove the call to 'abs' since unsigned values cannot be negative

if ( abs(ISEC2_LastLat - (ISEC2_FirstLat+ISEC2_LatIncr*(grid->y.size-1))) <= 2 )

libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_ext.c -fno-common -DPIC -o .libs/stream_ext.o libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_ext.c -o stream_ext.o >/dev/null 2>&1 libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_cdf_i.c -o stream_cdf_i.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o stream_grb.lo stream_grb.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_grb.c -fno-common -DPIC -o .libs/stream_grb.o 2 warnings generated. libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_cgribex.c -o stream_cgribex.o >/dev/null 2>&1 libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_grb.c -o stream_grb.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o stream_history.lo stream_history.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_history.c -fno-common -DPIC -o .libs/stream_history.o libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_history.c -o stream_history.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o stream_ieg.lo stream_ieg.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_ieg.c -fno-common -DPIC -o .libs/stream_ieg.o /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o cdi_int.lo cdi_int.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cdi_int.c -fno-common -DPIC -o .libs/cdi_int.o libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_ieg.c -o stream_ieg.o >/dev/null 2>&1 libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cdi_int.c -o cdi_int.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o stream_record.lo stream_record.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_record.c -fno-common -DPIC -o .libs/stream_record.o /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o stream_srv.lo stream_srv.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_srv.c -fno-common -DPIC -o .libs/stream_srv.o libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_record.c -o stream_record.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o stream_var.lo stream_var.c /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o grb_write.lo grb_write.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_var.c -fno-common -DPIC -o .libs/stream_var.o libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c grb_write.c -fno-common -DPIC -o .libs/grb_write.o libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_var.c -o stream_var.o >/dev/null 2>&1 libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_srv.c -o stream_srv.o >/dev/null 2>&1 libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c grb_write.c -o grb_write.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o grb_read.lo grb_read.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c grb_read.c -fno-common -DPIC -o .libs/grb_read.o /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o cdf_write.lo cdf_write.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cdf_write.c -fno-common -DPIC -o .libs/cdf_write.o libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c grb_read.c -o grb_read.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o cdf_read.lo cdf_read.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cdf_read.c -fno-common -DPIC -o .libs/cdf_read.o /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o cdf_lazy_grid.lo cdf_lazy_grid.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cdf_lazy_grid.c -fno-common -DPIC -o .libs/cdf_lazy_grid.o /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o subtype.lo subtype.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c subtype.c -fno-common -DPIC -o .libs/subtype.o libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cdf_lazy_grid.c -o cdf_lazy_grid.o >/dev/null 2>&1 libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cdf_read.c -o cdf_read.o >/dev/null 2>&1 libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cdf_write.c -o cdf_write.o >/dev/null 2>&1 libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c subtype.c -o subtype.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o table.lo table.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c table.c -fno-common -DPIC -o .libs/table.o /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o taxis.lo taxis.c /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o timebase.lo timebase.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c taxis.c -fno-common -DPIC -o .libs/taxis.o libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c timebase.c -fno-common -DPIC -o .libs/timebase.o libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c timebase.c -o timebase.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o tsteps.lo tsteps.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c tsteps.c -fno-common -DPIC -o .libs/tsteps.o /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o util.lo util.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c tsteps.c -o tsteps.o >/dev/null 2>&1 libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c util.c -fno-common -DPIC -o .libs/util.o libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c table.c -o table.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o varscan.lo varscan.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c util.c -o util.o >/dev/null 2>&1 libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c varscan.c -fno-common -DPIC -o .libs/varscan.o libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c taxis.c -o taxis.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o version.lo version.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c version.c -fno-common -DPIC -o .libs/version.o libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c version.c -o version.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o vlist.lo vlist.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c vlist.c -fno-common -DPIC -o .libs/vlist.o /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch 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-Os -arch x86_64 -D_THREAD_SAFE -pthread -c varscan.c -o varscan.o >/dev/null 2>&1 libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c cdi_att.c -o cdi_att.o >/dev/null 2>&1 libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c vlist.c -o vlist.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o zaxis.lo zaxis.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os 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-I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream.c -o stream.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o stream_write.lo stream_write.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_write.c -fno-common -DPIC -o .libs/stream_write.o libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c zaxis.c -o zaxis.o >/dev/null 2>&1 libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include 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-DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c swap.c -fno-common -DPIC -o .libs/swap.o libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c swap.c -o swap.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o iterator.lo iterator.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c iterator.c -fno-common -DPIC -o .libs/iterator.o libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_read.c -o stream_read.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o iterator_fallback.lo iterator_fallback.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c iterator_fallback.c -fno-common -DPIC -o .libs/iterator_fallback.o /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 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/opt/local/bin/clang-mp-5.0 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -L/opt/local/lib -L/opt/local/lib -L/opt/local/lib -Wl,-headerpad_max_install_names -lhdf5 -lpng -lopenjpeg -arch x86_64 -o libcdiresunpack.la resource_unpack.lo -leccodes -lnetcdf -lm libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c iterator_grib.c -o iterator_grib.o >/dev/null 2>&1 libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c gribapi_utilities.c -o gribapi_utilities.o >/dev/null 2>&1 libtool: link: ar cru .libs/libcdiresunpack.a .libs/resource_unpack.o libtool: link: ranlib .libs/libcdiresunpack.a libtool: link: ( cd ".libs" && rm -f "libcdiresunpack.la" && ln -s "../libcdiresunpack.la" "libcdiresunpack.la" ) libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c stream_gribapi.c -o stream_gribapi.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=link /opt/local/bin/clang-mp-5.0 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -L/opt/local/lib -L/opt/local/lib -L/opt/local/lib -Wl,-headerpad_max_install_names -lhdf5 -lpng -lopenjpeg -arch x86_64 -o libcdi.la basetime.lo binary.lo calendar.lo cdf.lo cdf_int.lo cdf_util.lo cdi_error.lo cdi_util.lo cgribexlib.lo dmemory.lo cksum.lo cdi_cksum.lo error.lo extralib.lo file.lo gaussgrid.lo gribapi.lo grid.lo ieglib.lo input_file.lo institution.lo model.lo namespace.lo serialize.lo referenceCounting.lo resource_handle.lo servicelib.lo stream_cdf_i.lo stream_cdf_o.lo stream_cdf_time.lo stream_cgribex.lo stream_ext.lo stream_grb.lo stream_history.lo stream_ieg.lo cdi_int.lo stream_record.lo stream_srv.lo stream_var.lo grb_write.lo grb_read.lo cdf_write.lo cdf_read.lo cdf_lazy_grid.lo subtype.lo table.lo taxis.lo timebase.lo tsteps.lo util.lo varscan.lo version.lo vlist.lo cdi_att.lo vlist_var.lo zaxis.lo stream.lo stream_write.lo stream_read.lo swap.lo iterator.lo iterator_fallback.lo iterator_grib.lo gribapi_utilities.lo stream_gribapi.lo -leccodes -lnetcdf -lm libtool: link: ar cru .libs/libcdi.a .libs/basetime.o .libs/binary.o .libs/calendar.o .libs/cdf.o .libs/cdf_int.o .libs/cdf_util.o .libs/cdi_error.o .libs/cdi_util.o .libs/cgribexlib.o .libs/dmemory.o .libs/cksum.o .libs/cdi_cksum.o .libs/error.o .libs/extralib.o .libs/file.o .libs/gaussgrid.o .libs/gribapi.o .libs/grid.o .libs/ieglib.o .libs/input_file.o .libs/institution.o .libs/model.o .libs/namespace.o .libs/serialize.o .libs/referenceCounting.o .libs/resource_handle.o .libs/servicelib.o .libs/stream_cdf_i.o .libs/stream_cdf_o.o .libs/stream_cdf_time.o .libs/stream_cgribex.o .libs/stream_ext.o .libs/stream_grb.o .libs/stream_history.o .libs/stream_ieg.o .libs/cdi_int.o .libs/stream_record.o .libs/stream_srv.o .libs/stream_var.o .libs/grb_write.o .libs/grb_read.o .libs/cdf_write.o .libs/cdf_read.o .libs/cdf_lazy_grid.o .libs/subtype.o .libs/table.o .libs/taxis.o .libs/timebase.o .libs/tsteps.o .libs/util.o .libs/varscan.o .libs/version.o .libs/vlist.o .libs/cdi_att.o .libs/vlist_var.o .libs/zaxis.o .libs/stream.o .libs/stream_write.o .libs/stream_read.o .libs/swap.o .libs/iterator.o .libs/iterator_fallback.o .libs/iterator_grib.o .libs/gribapi_utilities.o .libs/stream_gribapi.o libtool: link: ranlib .libs/libcdi.a libtool: link: ( cd ".libs" && rm -f "libcdi.la" && ln -s "../libcdi.la" "libcdi.la" ) make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.2/libcdi/src' make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.2/libcdi/src' Making all in interfaces make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.2/libcdi/interfaces' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.2/libcdi/interfaces' Making all in app make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.2/libcdi/app' /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I../src -I../src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o cdi.o cdi.c /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I../src -I../src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o createtable.o createtable.c /bin/sh ../libtool --tag=CC --mode=link /opt/local/bin/clang-mp-5.0 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -L/opt/local/lib -L/opt/local/lib -L/opt/local/lib -Wl,-headerpad_max_install_names -lhdf5 -lpng -lopenjpeg -arch x86_64 -o createtable createtable.o ../src/libcdi.la -leccodes -lnetcdf -lm libtool: link: /opt/local/bin/clang-mp-5.0 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -Wl,-headerpad_max_install_names -arch x86_64 -o createtable createtable.o -L/opt/local/lib ../src/.libs/libcdi.a /opt/local/lib/libhdf5.dylib /opt/local/lib/libpng16.dylib /opt/local/lib/libopenjpeg.dylib -leccodes -lnetcdf -lm -pthread /bin/sh ../libtool --tag=CC --mode=link /opt/local/bin/clang-mp-5.0 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -L/opt/local/lib -L/opt/local/lib -L/opt/local/lib -Wl,-headerpad_max_install_names -lhdf5 -lpng -lopenjpeg -arch x86_64 -o cdi cdi.o ../src/libcdi.la -leccodes -lnetcdf -lm -leccodes -lnetcdf -lm libtool: link: /opt/local/bin/clang-mp-5.0 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -Wl,-headerpad_max_install_names -arch x86_64 -o cdi cdi.o -L/opt/local/lib ../src/.libs/libcdi.a /opt/local/lib/libhdf5.dylib /opt/local/lib/libpng16.dylib /opt/local/lib/libopenjpeg.dylib -leccodes -lnetcdf -lm -pthread make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.2/libcdi/app' Making all in examples make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.2/libcdi/examples' /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I../src -I../src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o cdi_write.o cdi_write.c /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I../src -I../src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o cdi_write_relativ.o cdi_write_relativ.c /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I../src -I../src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o cdi_write_ens.o cdi_write_ens.c /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I../src -I../src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o cdi_write_hybrid.o cdi_write_hybrid.c /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I../src -I../src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o cdi_read.o cdi_read.c /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I../src -I../src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o cdi_copy.o cdi_copy.c /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I../src -I../src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o cdi_write_const.o cdi_write_const.c /bin/sh ../libtool --tag=CC --mode=link /opt/local/bin/clang-mp-5.0 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -L/opt/local/lib -L/opt/local/lib -L/opt/local/lib -Wl,-headerpad_max_install_names -lhdf5 -lpng -lopenjpeg -arch x86_64 -o cdi_write cdi_write.o ../src/libcdi.la -leccodes -lnetcdf -lm /bin/sh ../libtool --tag=CC --mode=link /opt/local/bin/clang-mp-5.0 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -L/opt/local/lib -L/opt/local/lib -L/opt/local/lib -Wl,-headerpad_max_install_names -lhdf5 -lpng -lopenjpeg -arch x86_64 -o cdi_write_relativ cdi_write_relativ.o ../src/libcdi.la -leccodes -lnetcdf -lm /bin/sh ../libtool --tag=CC --mode=link /opt/local/bin/clang-mp-5.0 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -L/opt/local/lib -L/opt/local/lib -L/opt/local/lib -Wl,-headerpad_max_install_names -lhdf5 -lpng -lopenjpeg -arch x86_64 -o cdi_write_ens cdi_write_ens.o ../src/libcdi.la -leccodes -lnetcdf -lm /bin/sh ../libtool --tag=CC --mode=link /opt/local/bin/clang-mp-5.0 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -L/opt/local/lib -L/opt/local/lib -L/opt/local/lib -Wl,-headerpad_max_install_names -lhdf5 -lpng -lopenjpeg -arch x86_64 -o cdi_write_hybrid cdi_write_hybrid.o ../src/libcdi.la -leccodes -lnetcdf -lm libtool: link: /opt/local/bin/clang-mp-5.0 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -Wl,-headerpad_max_install_names -arch x86_64 -o cdi_write cdi_write.o -L/opt/local/lib ../src/.libs/libcdi.a /opt/local/lib/libhdf5.dylib /opt/local/lib/libpng16.dylib /opt/local/lib/libopenjpeg.dylib -leccodes -lnetcdf -lm -pthread libtool: link: /opt/local/bin/clang-mp-5.0 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -Wl,-headerpad_max_install_names -arch x86_64 -o cdi_write_relativ cdi_write_relativ.o -L/opt/local/lib ../src/.libs/libcdi.a /opt/local/lib/libhdf5.dylib /opt/local/lib/libpng16.dylib /opt/local/lib/libopenjpeg.dylib -leccodes -lnetcdf -lm -pthread libtool: link: /opt/local/bin/clang-mp-5.0 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -Wl,-headerpad_max_install_names -arch x86_64 -o cdi_write_hybrid cdi_write_hybrid.o -L/opt/local/lib ../src/.libs/libcdi.a /opt/local/lib/libhdf5.dylib /opt/local/lib/libpng16.dylib /opt/local/lib/libopenjpeg.dylib -leccodes -lnetcdf -lm -pthread libtool: link: /opt/local/bin/clang-mp-5.0 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -Wl,-headerpad_max_install_names -arch x86_64 -o cdi_write_ens cdi_write_ens.o -L/opt/local/lib ../src/.libs/libcdi.a /opt/local/lib/libhdf5.dylib /opt/local/lib/libpng16.dylib /opt/local/lib/libopenjpeg.dylib -leccodes -lnetcdf -lm -pthread /bin/sh ../libtool --tag=CC --mode=link /opt/local/bin/clang-mp-5.0 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -L/opt/local/lib -L/opt/local/lib -L/opt/local/lib -Wl,-headerpad_max_install_names -lhdf5 -lpng -lopenjpeg -arch x86_64 -o cdi_read cdi_read.o ../src/libcdi.la -leccodes -lnetcdf -lm /bin/sh ../libtool --tag=CC --mode=link /opt/local/bin/clang-mp-5.0 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -L/opt/local/lib -L/opt/local/lib -L/opt/local/lib -Wl,-headerpad_max_install_names -lhdf5 -lpng -lopenjpeg -arch x86_64 -o cdi_copy cdi_copy.o ../src/libcdi.la -leccodes -lnetcdf -lm /bin/sh ../libtool --tag=CC --mode=link /opt/local/bin/clang-mp-5.0 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -L/opt/local/lib -L/opt/local/lib -L/opt/local/lib -Wl,-headerpad_max_install_names -lhdf5 -lpng -lopenjpeg -arch x86_64 -o cdi_write_const cdi_write_const.o ../src/libcdi.la -leccodes -lnetcdf -lm libtool: link: /opt/local/bin/clang-mp-5.0 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -Wl,-headerpad_max_install_names -arch x86_64 -o cdi_read cdi_read.o -L/opt/local/lib ../src/.libs/libcdi.a /opt/local/lib/libhdf5.dylib /opt/local/lib/libpng16.dylib /opt/local/lib/libopenjpeg.dylib -leccodes -lnetcdf -lm -pthread libtool: link: /opt/local/bin/clang-mp-5.0 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -Wl,-headerpad_max_install_names -arch x86_64 -o cdi_copy cdi_copy.o -L/opt/local/lib ../src/.libs/libcdi.a /opt/local/lib/libhdf5.dylib /opt/local/lib/libpng16.dylib /opt/local/lib/libopenjpeg.dylib -leccodes -lnetcdf -lm -pthread libtool: link: /opt/local/bin/clang-mp-5.0 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -Wl,-headerpad_max_install_names -arch x86_64 -o cdi_write_const cdi_write_const.o -L/opt/local/lib ../src/.libs/libcdi.a /opt/local/lib/libhdf5.dylib /opt/local/lib/libpng16.dylib /opt/local/lib/libopenjpeg.dylib -leccodes -lnetcdf -lm -pthread make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.2/libcdi/examples' Making all in examples/pio make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.2/libcdi/examples/pio' /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I../../src -I../../src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o collectData.o collectData.c /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I../../src -I../../src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o collectDataNStreams.o collectDataNStreams.c /bin/sh ../../libtool --tag=CC --mode=link /opt/local/bin/clang-mp-5.0 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -L/opt/local/lib -L/opt/local/lib -L/opt/local/lib -Wl,-headerpad_max_install_names -lhdf5 -lpng -lopenjpeg -arch x86_64 -o collectData collectData.o ../../src/libcdi.la -leccodes -lnetcdf -lm /bin/sh ../../libtool --tag=CC --mode=link /opt/local/bin/clang-mp-5.0 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -L/opt/local/lib -L/opt/local/lib -L/opt/local/lib -Wl,-headerpad_max_install_names -lhdf5 -lpng -lopenjpeg -arch x86_64 -o collectDataNStreams collectDataNStreams.o ../../src/libcdi.la -leccodes -lnetcdf -lm libtool: link: /opt/local/bin/clang-mp-5.0 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -Wl,-headerpad_max_install_names -arch x86_64 -o collectData collectData.o -L/opt/local/lib ../../src/.libs/libcdi.a /opt/local/lib/libhdf5.dylib /opt/local/lib/libpng16.dylib /opt/local/lib/libopenjpeg.dylib -leccodes -lnetcdf -lm -pthread libtool: link: /opt/local/bin/clang-mp-5.0 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -Wl,-headerpad_max_install_names -arch x86_64 -o collectDataNStreams collectDataNStreams.o -L/opt/local/lib ../../src/.libs/libcdi.a /opt/local/lib/libhdf5.dylib /opt/local/lib/libpng16.dylib /opt/local/lib/libopenjpeg.dylib -leccodes -lnetcdf -lm -pthread make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.2/libcdi/examples/pio' Making all in tests make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.2/libcdi/tests' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.2/libcdi/tests' make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.2/libcdi' make[2]: Nothing to be done for `all-am'. make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.2/libcdi' make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.2/libcdi' Making all in src/lib/ncl make[1]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.2/src/lib/ncl' make[1]: Nothing to be done for `all'. make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.2/src/lib/ncl' Making all in src make[1]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.2/src' /usr/bin/make all-am make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.2/src' /bin/sh ../libtool --tag=CXX --mode=compile /opt/local/bin/clang++-mp-5.0 -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -D_GLIBCXX_USE_CXX11_ABI=0 -stdlib=macports-libstdc++ -arch x86_64 -D_THREAD_SAFE -pthread -c -o libcdo_la-argument.lo test -f 'argument.cc' || echo './'argument.cc /bin/sh ../libtool --tag=CXX --mode=compile /opt/local/bin/clang++-mp-5.0 -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -D_GLIBCXX_USE_CXX11_ABI=0 -stdlib=macports-libstdc++ -arch x86_64 -D_THREAD_SAFE -pthread -c -o libcdo_la-array.lo test -f 'array.cc' || echo './'array.cc /bin/sh ../libtool --tag=CXX --mode=compile /opt/local/bin/clang++-mp-5.0 -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -D_GLIBCXX_USE_CXX11_ABI=0 -stdlib=macports-libstdc++ -arch x86_64 -D_THREAD_SAFE -pthread -c -o libcdo_la-cdo_pthread.lo test -f 'cdo_pthread.cc' || echo './'cdo_pthread.cc /bin/sh ../libtool --tag=CXX --mode=compile /opt/local/bin/clang++-mp-5.0 -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -D_GLIBCXX_USE_CXX11_ABI=0 -stdlib=macports-libstdc++ -arch x86_64 -D_THREAD_SAFE -pthread -c -o libcdo_la-cdo_vlist.lo test -f 'cdo_vlist.cc' || echo './'cdo_vlist.cc libtool: compile: /opt/local/bin/clang++-mp-5.0 -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -D_GLIBCXX_USE_CXX11_ABI=0 -stdlib=macports-libstdc++ -arch x86_64 -D_THREAD_SAFE -pthread -c argument.cc -fno-common -DPIC -o .libs/libcdo_la-argument.o libtool: compile: /opt/local/bin/clang++-mp-5.0 -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -D_GLIBCXX_USE_CXX11_ABI=0 -stdlib=macports-libstdc++ -arch x86_64 -D_THREAD_SAFE -pthread -c cdo_pthread.cc -fno-common -DPIC -o .libs/libcdo_la-cdo_pthread.o libtool: compile: /opt/local/bin/clang++-mp-5.0 -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -D_GLIBCXX_USE_CXX11_ABI=0 -stdlib=macports-libstdc++ -arch x86_64 -D_THREAD_SAFE -pthread -c array.cc -fno-common -DPIC -o .libs/libcdo_la-array.o libtool: compile: /opt/local/bin/clang++-mp-5.0 -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -D_GLIBCXX_USE_CXX11_ABI=0 -stdlib=macports-libstdc++ -arch x86_64 -D_THREAD_SAFE -pthread -c cdo_vlist.cc -fno-common -DPIC -o .libs/libcdo_la-cdo_vlist.o libtool: compile: /opt/local/bin/clang++-mp-5.0 -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -D_GLIBCXX_USE_CXX11_ABI=0 -stdlib=macports-libstdc++ -arch x86_64 -D_THREAD_SAFE -pthread -c array.cc -o libcdo_la-array.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile /opt/local/bin/clang++-mp-5.0 -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -D_GLIBCXX_USE_CXX11_ABI=0 -stdlib=macports-libstdc++ -arch x86_64 -D_THREAD_SAFE -pthread -c -o libcdo_la-cdo_getopt.lo test -f 'cdo_getopt.cc' || echo './'cdo_getopt.cc libtool: compile: /opt/local/bin/clang++-mp-5.0 -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -D_GLIBCXX_USE_CXX11_ABI=0 -stdlib=macports-libstdc++ -arch x86_64 -D_THREAD_SAFE -pthread -c cdo_getopt.cc -fno-common -DPIC -o .libs/libcdo_la-cdo_getopt.o libtool: compile: /opt/local/bin/clang++-mp-5.0 -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -D_GLIBCXX_USE_CXX11_ABI=0 -stdlib=macports-libstdc++ -arch x86_64 -D_THREAD_SAFE -pthread -c cdo_pthread.cc -o libcdo_la-cdo_pthread.o >/dev/null 2>&1 In file included from argument.cc:2: ./cdoDebugOutput.h:20:12: warning: expression result unused [-Wunused-value]

expander{0,(void(p_message << std::forward<T>(args)),0)...}; ^~

./cdoDebugOutput.h:86:17: note: in instantiation of function template specialization 'CdoLog::expand<char const (&)[37], const char *&>' requested here

CdoLog::expand(message, args...);

argument.cc:17:5: note: in instantiation of function template specialization 'CdoDebug::Message_<char const (&)[37], const char *&>' requested here

MESSAGE("Creating new file argument for file ", filename);

./cdoDebugOutput.h:149:40: note: expanded from macro 'MESSAGE' # define MESSAGE(...) CdoDebug::Message_(func,VA_ARGS)

libtool: compile: /opt/local/bin/clang++-mp-5.0 -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -D_GLIBCXX_USE_CXX11_ABI=0 -stdlib=macports-libstdc++ -arch x86_64 -D_THREAD_SAFE -pthread -c cdo_getopt.cc -o libcdo_la-cdo_getopt.o >/dev/null 2>&1 ./cdoDebugOutput.h:20:12: warning: expression result unused [-Wunused-value]

expander{0,(void(p_message << std::forward<T>(args)),0)...}; ^~

./cdoDebugOutput.h:86:17: note: in instantiation of function template specialization 'CdoLog::expand<char const (&)[41], char *&>' requested here

CdoLog::expand(message, args...);

argument.cc:35:5: note: in instantiation of function template specialization 'CdoDebug::Message_<char const (&)[41], char *&>' requested here

MESSAGE("Creating new pipe argument for pipename ", pipename );

./cdoDebugOutput.h:149:40: note: expanded from macro 'MESSAGE' # define MESSAGE(...) CdoDebug::Message_(func,VA_ARGS)

./cdoDebugOutput.h:20:12: warning: expression result unused [-Wunused-value]

expander{0,(void(p_message << std::forward<T>(args)),0)...}; ^~

./cdoDebugOutput.h:86:17: note: in instantiation of function template specialization 'CdoLog::expand<char const (&)[22]>' requested here

CdoLog::expand(message, args...);

argument.cc:74:5: note: in instantiation of function template specialization 'CdoDebug::Message_<char const (&)[22]>' requested here

MESSAGE("Creating new argument");

./cdoDebugOutput.h:149:40: note: expanded from macro 'MESSAGE' # define MESSAGE(...) CdoDebug::Message_(func,VA_ARGS)

/bin/sh ../libtool --tag=CXX --mode=compile /opt/local/bin/clang++-mp-5.0 -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -D_GLIBCXX_USE_CXX11_ABI=0 -stdlib=macports-libstdc++ -arch x86_64 -D_THREAD_SAFE -pthread -c -o libcdo_la-cdo_task.lo test -f 'cdo_task.cc' || echo './'cdo_task.cc libtool: compile: /opt/local/bin/clang++-mp-5.0 -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -D_GLIBCXX_USE_CXX11_ABI=0 -stdlib=macports-libstdc++ -arch x86_64 -D_THREAD_SAFE -pthread -c cdo_task.cc -fno-common -DPIC -o .libs/libcdo_la-cdo_task.o 3 warnings generated. 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libtool: compile: /opt/local/bin/clang++-mp-5.0 -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -D_GLIBCXX_USE_CXX11_ABI=0 -stdlib=macports-libstdc++ -arch x86_64 -D_THREAD_SAFE -pthread -c field.cc -o libcdo_la-field.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile /opt/local/bin/clang++-mp-5.0 -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -D_GLIBCXX_USE_CXX11_ABI=0 -stdlib=macports-libstdc++ -arch x86_64 -D_THREAD_SAFE -pthread -c -o libcdo_la-fieldc.lo test -f 'fieldc.cc' || echo './'fieldc.cc libtool: compile: /opt/local/bin/clang++-mp-5.0 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-I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -D_GLIBCXX_USE_CXX11_ABI=0 -stdlib=macports-libstdc++ -arch x86_64 -D_THREAD_SAFE -pthread -c fieldc.cc -o libcdo_la-fieldc.o >/dev/null 2>&1 libtool: compile: /opt/local/bin/clang++-mp-5.0 -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -D_GLIBCXX_USE_CXX11_ABI=0 -stdlib=macports-libstdc++ -arch x86_64 -D_THREAD_SAFE -pthread -c fieldmem.cc -o libcdo_la-fieldmem.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CXX --mode=compile /opt/local/bin/clang++-mp-5.0 -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -D_GLIBCXX_USE_CXX11_ABI=0 -stdlib=macports-libstdc++ -arch x86_64 -D_THREAD_SAFE -pthread -c -o libcdo_la-fieldzon.lo test -f 'fieldzon.cc' || echo './'fieldzon.cc libtool: compile: /opt/local/bin/clang++-mp-5.0 -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -D_GLIBCXX_USE_CXX11_ABI=0 -stdlib=macports-libstdc++ -arch x86_64 -D_THREAD_SAFE -pthread -c fieldzon.cc -fno-common -DPIC -o .libs/libcdo_la-fieldzon.o libtool: compile: /opt/local/bin/clang++-mp-5.0 -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -D_GLIBCXX_USE_CXX11_ABI=0 -stdlib=macports-libstdc++ -arch x86_64 -D_THREAD_SAFE -pthread -c fieldmer.cc -o libcdo_la-fieldmer.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o libcdo_la-getMemorySize.lo test -f 'getMemorySize.c' || echo './'getMemorySize.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c getMemorySize.c -fno-common -DPIC -o .libs/libcdo_la-getMemorySize.o libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c getMemorySize.c -o libcdo_la-getMemorySize.o >/dev/null 2>&1 /bin/sh ../libtool --tag=CC --mode=compile /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c -o libcdo_la-getRSS.lo test -f 'getRSS.c' || echo './'getRSS.c libtool: compile: /opt/local/bin/clang-mp-5.0 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -arch x86_64 -D_THREAD_SAFE -pthread -c getRSS.c -fno-common -DPIC -o .libs/libcdo_la-getRSS.o getRSS.c:97:30: error: variable has incomplete type 'struct mach_task_basic_info'

struct mach_task_basic_info info;

getRSS.c:97:9: note: forward declaration of 'struct mach_task_basic_info'

struct mach_task_basic_info info;

getRSS.c:98:37: error: use of undeclared identifier 'MACH_TASK_BASIC_INFO_COUNT'

mach_msg_type_number_t infoCount = MACH_TASK_BASIC_INFO_COUNT;

getRSS.c:99:37: error: use of undeclared identifier 'MACH_TASK_BASIC_INFO'

if ( task_info( mach_task_self( ), MACH_TASK_BASIC_INFO,

3 errors generated. make[2]: * [libcdo_la-getRSS.lo] Error 1 make[2]: * Waiting for unfinished jobs.... libtool: compile: /opt/local/bin/clang++-mp-5.0 -std=gnu++11 -DHAVE_CONFIG_H -I. -I../libcdi/src -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include -I/opt/local/include/udunits2 -I/opt/local/include -I/opt/local/include/udunits2 -pipe -Os -D_GLIBCXX_USE_CXX11_ABI=0 -stdlib=macports-libstdc++ -arch x86_64 -D_THREAD_SAFE -pthread -c fieldzon.cc -o libcdo_la-fieldzon.o >/dev/null 2>&1 make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.2/src' make[1]: * [all] Error 2 make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.2/src' make: * [all-recursive] Error 1 make: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.2' Command failed: cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/work/cdo-1.9.2" && /usr/bin/make -j4 -w all Exit code: 2 Error: Failed to build cdo: command execution failed DEBUG: Error code: CHILDSTATUS 12344 2 DEBUG: Backtrace: command execution failed

while executing

"system {*}$notty {*}$nice $fullcmdstring"

invoked from within

"command_exec build"

(procedure "portbuild::build_main" line 8) invoked from within

"$procedure $targetname" Error: See /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_cdo/cdo/main.log for details. Error: Follow ​https://guide.macports.org/#project.tickets to report a bug. Error: Processing of port cdo failed Sibylles-MacBook-Air:~ Sibylle$