Changes between Initial Version and Version 1 of Ticket #66208, comment 16


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Timestamp:
Feb 9, 2023, 9:53:37 PM (15 months ago)
Author:
massonseb
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  • Ticket #66208, comment 16

    initial v1  
    99which are the same files.
    1010
    11 However `sudo port install hdf5 +gcc12` or `sudo port install hdf5 +gcc12 +openmpi` are still not working.
    12 
    13 I get exactly the same error in the log file:
     11However hdf5 compilation with gcc12 is still not working.
     12
     13**1) with `sudo port install hdf5 +gcc12`** \\
     14I have the following error (see main.2.log for the complete log file):
     15
     16{{{
     17:info:build In file included from H5Library.cpp:13:
     18:info:build /opt/local/libexec/gcc12/libc++/include/c++/v1/cstdlib:135:9: error: 'at_quick_exit' has not been declared in '::'
     19:info:build   135 | using ::at_quick_exit _LIBCPP_USING_IF_EXISTS;
     20:info:build       |         ^~~~~~~~~~~~~
     21:info:build /opt/local/libexec/gcc12/libc++/include/c++/v1/cstdlib:136:9: error: 'quick_exit' has not been declared in '::'
     22:info:build   136 | using ::quick_exit _LIBCPP_USING_IF_EXISTS;
     23:info:build       |         ^~~~~~~~~~
     24:info:build In file included from /opt/local/libexec/gcc12/libc++/include/c++/v1/__utility/unreachable.h:13,
     25:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/__iterator/advance.h:19,
     26:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/__iterator/reverse_iterator.h:18,
     27:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/string:532,
     28:info:build                  from H5LaccProp.cpp:13:
     29:info:build /opt/local/libexec/gcc12/libc++/include/c++/v1/cstdlib:135:9: error: 'at_quick_exit' has not been declared in '::'
     30:info:build   135 | using ::at_quick_exit _LIBCPP_USING_IF_EXISTS;
     31:info:build       |         ^~~~~~~~~~~~~
     32:info:build /opt/local/libexec/gcc12/libc++/include/c++/v1/cstdlib:136:9: error: 'quick_exit' has not been declared in '::'
     33:info:build   136 | using ::quick_exit _LIBCPP_USING_IF_EXISTS;
     34:info:build       |         ^~~~~~~~~~
     35:info:build In file included from /opt/local/libexec/gcc12/libc++/include/c++/v1/__utility/unreachable.h:13,
     36:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/__iterator/advance.h:19,
     37:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/__iterator/reverse_iterator.h:18,
     38:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/string:532,
     39:info:build                  from H5Exception.cpp:13:
     40:info:build /opt/local/libexec/gcc12/libc++/include/c++/v1/cstdlib:135:9: error: 'at_quick_exit' has not been declared in '::'
     41:info:build   135 | using ::at_quick_exit _LIBCPP_USING_IF_EXISTS;
     42:info:build       |         ^~~~~~~~~~~~~
     43:info:build /opt/local/libexec/gcc12/libc++/include/c++/v1/cstdlib:136:9: error: 'quick_exit' has not been declared in '::'
     44:info:build   136 | using ::quick_exit _LIBCPP_USING_IF_EXISTS;
     45:info:build       |         ^~~~~~~~~~
     46:info:build In file included from /opt/local/libexec/gcc12/libc++/include/c++/v1/__utility/unreachable.h:13,
     47:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/__iterator/advance.h:19,
     48:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/__iterator/reverse_iterator.h:18,
     49:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/string:532,
     50:info:build                  from H5DaccProp.cpp:13:
     51:info:build /opt/local/libexec/gcc12/libc++/include/c++/v1/cstdlib:135:9: error: 'at_quick_exit' has not been declared in '::'
     52:info:build   135 | using ::at_quick_exit _LIBCPP_USING_IF_EXISTS;
     53:info:build       |         ^~~~~~~~~~~~~
     54:info:build /opt/local/libexec/gcc12/libc++/include/c++/v1/cstdlib:136:9: error: 'quick_exit' has not been declared in '::'
     55:info:build   136 | using ::quick_exit _LIBCPP_USING_IF_EXISTS;
     56:info:build       |         ^~~~~~~~~~
     57:info:build In file included from /opt/local/libexec/gcc12/libc++/include/c++/v1/__utility/unreachable.h:13,
     58:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/__iterator/advance.h:19,
     59:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/__iterator/reverse_iterator.h:18,
     60:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/string:532,
     61:info:build                  from H5IdComponent.cpp:13:
     62:info:build /opt/local/libexec/gcc12/libc++/include/c++/v1/cstdlib:135:9: error: 'at_quick_exit' has not been declared in '::'
     63:info:build   135 | using ::at_quick_exit _LIBCPP_USING_IF_EXISTS;
     64:info:build       |         ^~~~~~~~~~~~~
     65:info:build /opt/local/libexec/gcc12/libc++/include/c++/v1/cstdlib:136:9: error: 'quick_exit' has not been declared in '::'
     66:info:build   136 | using ::quick_exit _LIBCPP_USING_IF_EXISTS;
     67:info:build       |         ^~~~~~~~~~
     68:info:build In file included from /opt/local/libexec/gcc12/libc++/include/c++/v1/__utility/unreachable.h:13,
     69:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/__iterator/advance.h:19,
     70:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/__iterator/reverse_iterator.h:18,
     71:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/string:532,
     72:info:build                  from H5LcreatProp.cpp:13:
     73:info:build /opt/local/libexec/gcc12/libc++/include/c++/v1/cstdlib:135:9: error: 'at_quick_exit' has not been declared in '::'
     74:info:build   135 | using ::at_quick_exit _LIBCPP_USING_IF_EXISTS;
     75:info:build       |         ^~~~~~~~~~~~~
     76:info:build /opt/local/libexec/gcc12/libc++/include/c++/v1/cstdlib:136:9: error: 'quick_exit' has not been declared in '::'
     77:info:build   136 | using ::quick_exit _LIBCPP_USING_IF_EXISTS;
     78:info:build       |         ^~~~~~~~~~
     79:info:build In file included from /opt/local/libexec/gcc12/libc++/include/c++/v1/__utility/unreachable.h:13,
     80:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/__iterator/advance.h:19,
     81:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/__iterator/reverse_iterator.h:18,
     82:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/string:532,
     83:info:build                  from H5FcreatProp.cpp:13:
     84:info:build /opt/local/libexec/gcc12/libc++/include/c++/v1/cstdlib:135:9: error: 'at_quick_exit' has not been declared in '::'
     85:info:build   135 | using ::at_quick_exit _LIBCPP_USING_IF_EXISTS;
     86:info:build       |         ^~~~~~~~~~~~~
     87:info:build /opt/local/libexec/gcc12/libc++/include/c++/v1/cstdlib:136:9: error: 'quick_exit' has not been declared in '::'
     88:info:build   136 | using ::quick_exit _LIBCPP_USING_IF_EXISTS;
     89:info:build       |         ^~~~~~~~~~
     90:info:build In file included from /opt/local/libexec/gcc12/libc++/include/c++/v1/__utility/unreachable.h:13,
     91:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/__iterator/advance.h:19,
     92:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/__iterator/next.h:15,
     93:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/__algorithm/unwrap_range.h:16,
     94:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/__algorithm/copy.h:13,
     95:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/memory:841,
     96:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/__locale:18,
     97:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/ios:221,
     98:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/iostream:41,
     99:info:build                  from H5DataSpace.cpp:13:
     100:info:build /opt/local/libexec/gcc12/libc++/include/c++/v1/cstdlib:135:9: error: 'at_quick_exit' has not been declared in '::'
     101:info:build   135 | using ::at_quick_exit _LIBCPP_USING_IF_EXISTS;
     102:info:build       |         ^~~~~~~~~~~~~
     103:info:build /opt/local/libexec/gcc12/libc++/include/c++/v1/cstdlib:136:9: error: 'quick_exit' has not been declared in '::'
     104:info:build   136 | using ::quick_exit _LIBCPP_USING_IF_EXISTS;
     105:info:build       |         ^~~~~~~~~~
     106:info:build In file included from /opt/local/libexec/gcc12/libc++/include/c++/v1/__utility/unreachable.h:13,
     107:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/__iterator/advance.h:19,
     108:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/__iterator/next.h:15,
     109:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/__algorithm/unwrap_range.h:16,
     110:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/__algorithm/copy.h:13,
     111:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/memory:841,
     112:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/__locale:18,
     113:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/ios:221,
     114:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/iostream:41,
     115:info:build                  from H5PropList.cpp:13:
     116:info:build /opt/local/libexec/gcc12/libc++/include/c++/v1/cstdlib:135:9: error: 'at_quick_exit' has not been declared in '::'
     117:info:build   135 | using ::at_quick_exit _LIBCPP_USING_IF_EXISTS;
     118:info:build       |         ^~~~~~~~~~~~~
     119:info:build /opt/local/libexec/gcc12/libc++/include/c++/v1/cstdlib:136:9: error: 'quick_exit' has not been declared in '::'
     120:info:build   136 | using ::quick_exit _LIBCPP_USING_IF_EXISTS;
     121:info:build       |         ^~~~~~~~~~
     122:info:build In file included from /opt/local/libexec/gcc12/libc++/include/c++/v1/__utility/unreachable.h:13,
     123:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/__iterator/advance.h:19,
     124:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/__iterator/next.h:15,
     125:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/__algorithm/unwrap_range.h:16,
     126:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/__algorithm/copy.h:13,
     127:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/memory:841,
     128:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/__locale:18,
     129:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/ios:221,
     130:info:build                  from /opt/local/libexec/gcc12/libc++/include/c++/v1/iostream:41,
     131:info:build                  from H5FaccProp.cpp:13:
     132:info:build /opt/local/libexec/gcc12/libc++/include/c++/v1/cstdlib:135:9: error: 'at_quick_exit' has not been declared in '::'
     133:info:build   135 | using ::at_quick_exit _LIBCPP_USING_IF_EXISTS;
     134:info:build       |         ^~~~~~~~~~~~~
     135:info:build /opt/local/libexec/gcc12/libc++/include/c++/v1/cstdlib:136:9: error: 'quick_exit' has not been declared in '::'
     136:info:build   136 | using ::quick_exit _LIBCPP_USING_IF_EXISTS;
     137:info:build       |         ^~~~~~~~~~
     138:info:build make[2]: *** [H5Exception.lo] Error 1
     139:info:build make[2]: *** Waiting for unfinished jobs....
     140:info:build make[2]: *** [H5FcreatProp.lo] Error 1
     141:info:build make[2]: *** [H5Library.lo] Error 1
     142:info:build make[2]: *** [H5LaccProp.lo] Error 1
     143:info:build make[2]: *** [H5IdComponent.lo] Error 1
     144:info:build make[2]: *** [H5LcreatProp.lo] Error 1
     145:info:build make[2]: *** [H5DaccProp.lo] Error 1
     146:info:build make[2]: *** [H5PropList.lo] Error 1
     147:info:build make[2]: *** [H5DataSpace.lo] Error 1
     148:info:build make[2]: *** [H5FaccProp.lo] Error 1
     149:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_hdf5/hdf5/work/hdf5-1.14.0/c++/src'
     150:info:build make[1]: *** [all-recursive] Error 1
     151:info:build make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_hdf5/hdf5/work/hdf5-1.14.0/c++'
     152:info:build make: *** [all-recursive] Error 1
     153:info:build make: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_hdf5/hdf5/work/hdf5-1.14.0'
     154:info:build Command failed:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_hdf5/hdf5/work/hdf5-1.14.0" && /usr/bin/make -j10 -w all
     155:info:build Exit code: 2
     156:error:build Failed to build hdf5: command execution failed
     157:debug:build Error code: CHILDSTATUS 37035 2
     158:debug:build Backtrace: command execution failed
     159:debug:build     while executing
     160:debug:build "system {*}$notty {*}$callback {*}$nice $fullcmdstring"
     161:debug:build     invoked from within
     162:debug:build "command_exec -callback portprogress::target_progress_callback build"
     163:debug:build     (procedure "portbuild::build_main" line 8)
     164:debug:build     invoked from within
     165:debug:build "$procedure $targetname"
     166:error:build See /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_hdf5/hdf5/main.log for details.
     167
     168}}}
     169
     170
     171**2) with `sudo port install hdf5 +gcc12  +openmpi`** \\
     172I have the same error than before (see main.3.log for the complete log file):
    14173
    15174{{{
    … …  
    37196:info:build Exit code: 2
    38197:error:build Failed to build hdf5: command execution failed
    39 :debug:build Error code: CHILDSTATUS 90996 2
     198:debug:build Error code: CHILDSTATUS 30715 2
    40199:debug:build Backtrace: command execution failed
    41200:debug:build     while executing
    … …  
    49208}}}
    50209
    51 I attach the full log file.
    52210
    53211Which step did I miss? \\