pymol 1.2r1 packaging

[howarth@…]

This packaging provides the current pymol 1.2r1 release built against python2.5. The build avoids using the configure script in pymol because it incorrectly creates the python modules as dylibs instead of .so files. Instead, the same approach is taken as in fink of using the setup/Rules.osx-fink file instead.

[howarth@…]

Revise Portfile to purge residual instances of /usr/X11R6 from build.
Depend-runs on xorg-apps to use xdpyinfo from MacPorts and not from system X11 in __init__.py.

[howarth@…]

use python2.6-config to find headers

[ryandesign@…]

It looks like this ticket will obsolete #17419. You may want to look at the portfile submitted there to see if you need to incorporate anything from it.

Before pymol can be committed, #21968 needs to be resolved.

[adfernandes@…]

FYI - Pymol 1.2r2 came out on Oct 05 as revision pymol-svn revision 3866.

[adfernandes@…]

Cc Me!

[adfernandes@…]

I edited howarth's Portfile to update it to 1.2r2 (and add some whitespace) - nice job, howarth - it never occurred to me to look at the fink install instructions.

After patching tcl (#21968) the install worked just fine; the tk interface even worked, so I'm closing my old submission (#17419) and recommend going with this one.

[adfernandes@…]

build against python26; update to 1.2r2

[ryandesign@…]

Replying to howarth@…:

Depend-runs on xorg-apps to use xdpyinfo from MacPorts and not from system X11 in __init__.py.

Do you really need to depend on port:xorg-apps for this? That's a really really big dependency. Can't you just depend on port:xdpyinfo?

[howarth@…]

Change depends_run to port:xdpyinfo

[howarth@…]

Changed depends_run to port:xdpyinfo. I didn't realize that xdpyinfo was
available with just that port.

[macsforever2000@…]

Added in r59391. I made a few minor changes. I removed the revision 0 line because that is the default and I obfuscated your email address. Thanks for the submission and stepping up as maintainer!

[ryandesign@…]

I made a few more minor adjustments in r59392, r59393, and r59395.

[ryandesign@…]

And a couple more minor changes in r59397 and r59398. I'm done for now.