Ticket #39343: R.log

File R.log, 35.4 KB (added by gregbg@…, 11 years ago)

an attempt of upgrading R

Line 
1--->  Computing dependencies for R.
2--->  Building R
3make: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1'
4make[1]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/m4'
5make[1]: Nothing to be done for `R'.
6make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/m4'
7make[1]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/tools'
8make[1]: Nothing to be done for `R'.
9make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/tools'
10make[1]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/doc'
11make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/doc/html'
12make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/doc/html'
13make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/doc/manual'
14make[2]: Nothing to be done for `R'.
15make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/doc/manual'
16make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/doc'
17make[1]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/etc'
18make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/etc'
19make[1]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/share'
20make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/share'
21make[1]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src'
22make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/scripts'
23make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/scripts'
24make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/scripts'
25make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/scripts'
26make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/include'
27make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/include/R_ext'
28make[3]: Nothing to be done for `R'.
29make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/include/R_ext'
30make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/include'
31make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/extra'
32make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/extra/blas'
33make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/extra/bzip2'
34make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/extra/blas'
35make[4]: `libRblas.dylib' is up to date.
36make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/extra/blas'
37make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/extra/bzip2'
38make[4]: `Makedeps' is up to date.
39make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/extra/bzip2'
40make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/extra/bzip2'
41make[4]: `libbz2.a' is up to date.
42make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/extra/bzip2'
43make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/extra/bzip2'
44make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/extra/blas'
45make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/extra/pcre'
46/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/lib/libRblas.dylib is unchanged
47make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/extra/blas'
48make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/extra/blas'
49make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/extra/pcre'
50make[4]: `Makedeps' is up to date.
51make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/extra/pcre'
52make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/extra/pcre'
53make[4]: `libpcre.a' is up to date.
54make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/extra/pcre'
55make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/extra/pcre'
56make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/extra/zlib'
57make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/extra/zlib'
58make[4]: `Makedeps' is up to date.
59make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/extra/zlib'
60make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/extra/intl'
61make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/extra/zlib'
62make[4]: `libz.a' is up to date.
63make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/extra/zlib'
64make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/extra/zlib'
65make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/extra/intl'
66make[4]: `charsetalias.h' is up to date.
67../../../src/include/libintl.h is unchanged
68make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/extra/tre'
69../../../include/libintl.h is unchanged
70make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/extra/intl'
71make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/extra/tre'
72make[4]: `Makedeps' is up to date.
73make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/extra/tre'
74make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/extra/intl'
75make[4]: `Makedeps' is up to date.
76make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/extra/intl'
77make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/extra/tre'
78make[4]: `libtre.a' is up to date.
79make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/extra/tre'
80make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/extra/tre'
81make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/extra/intl'
82make[4]: `libintl.a' is up to date.
83make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/extra/intl'
84make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/extra/intl'
85make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/extra'
86make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/appl'
87make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/appl'
88make[3]: `Makedeps' is up to date.
89make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/appl'
90make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/appl'
91make[3]: `libappl.a' is up to date.
92make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/appl'
93make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/appl'
94make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/nmath'
95make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/nmath'
96make[3]: `Makedeps' is up to date.
97make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/nmath'
98make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/nmath'
99make[3]: `libnmath.a' is up to date.
100make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/nmath'
101make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/nmath'
102make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/unix'
103make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/unix'
104make[3]: `Makedeps' is up to date.
105make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/unix'
106make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/unix'
107make[3]: `libunix.a' is up to date.
108make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/unix'
109make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/unix'
110/opt/local/bin/gcc-mp-4.5 -std=gnu99 -I. -I../../src/include -I../../src/include -I/opt/local/include/X11 -I/opt/local/include -DHAVE_CONFIG_H   -fopenmp -fPIC  -O2 -DOS_OBJECT_USE_OBJC=0 -m64  -DR_HOME='"/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1"' -o Rscript \
111          ./Rscript.c
112make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/unix'
113make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/unix'
114make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/main'
115make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/main'
116make[3]: `Makedeps' is up to date.
117make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/main'
118make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/main'
119make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/main'
120/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/lib/libR.dylib is unchanged
121make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/main'
122make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/main'
123make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/main'
124make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/main'
125/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/bin/exec/R is unchanged
126make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/main'
127make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/main'
128make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/main'
129make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/modules'
130make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/modules/lapack'
131make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/modules/internet'
132make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/modules/lapack'
133make[4]: `Makedeps' is up to date.
134make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/modules/lapack'
135make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/modules/internet'
136make[4]: `Makedeps' is up to date.
137make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/modules/internet'
138make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/modules/lapack'
139make[4]: `libRlapack.dylib' is up to date.
140make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/modules/internet'
141make[4]: `internet.so' is up to date.
142make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/modules/internet'
143make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/modules/internet'
144make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/modules/vfonts'
145make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/modules/vfonts'
146make[4]: `Makedeps' is up to date.
147make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/modules/vfonts'
148/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/lib/libRlapack.dylib is unchanged
149make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/modules/lapack'
150make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/modules/lapack'
151make[4]: `lapack.so' is up to date.
152make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/modules/lapack'
153make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/modules/vfonts'
154make[4]: `vfonts.so' is up to date.
155make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/modules/vfonts'
156make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/modules/lapack'
157make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/modules/vfonts'
158make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/modules/X11'
159make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/modules/X11'
160make[4]: `Makedeps' is up to date.
161make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/modules/X11'
162make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/modules/X11'
163make[4]: `R_X11.so' is up to date.
164make[4]: `R_de.so' is up to date.
165make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/modules/X11'
166make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/modules/X11'
167/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/modules/R_X11.so is unchanged
168/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/modules/R_de.so is unchanged
169make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/modules/X11'
170make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/modules/X11'
171make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/modules'
172make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library'
173make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/profile'
174building system startup profile
175make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/profile'
176make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/translations'
177building package 'translations'
178make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/translations'
179make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/translations'
180make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/translations'
181make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/base'
182building package 'base'
183make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/base'
184all.R is unchanged
185make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/base'
186make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/base'
187make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/tools'
188building package 'tools'
189make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/tools'
190all.R is unchanged
191make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/tools'
192make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/tools'
193make[5]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/tools/src'
194make[6]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/tools/src'
195make[6]: `Makedeps' is up to date.
196make[6]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/tools/src'
197make[6]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/tools/src'
198../../../../library/tools/libs/tools.so is unchanged
199make[6]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/tools/src'
200make[5]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/tools/src'
201make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/tools'
202make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/tools'
203make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/compiler'
204building package 'compiler'
205make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/compiler'
206all.R is unchanged
207make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/compiler'
208make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/compiler'
209make[4]: Nothing to be done for `mklazycomp'.
210make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/compiler'
211make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/compiler'
212make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/base'
213make[3]: Nothing to be done for `mklazycomp'.
214make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/base'
215make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/tools'
216make[3]: Nothing to be done for `mklazycomp'.
217make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/tools'
218make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/utils'
219building package 'utils'
220make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/utils'
221all.R is unchanged
222make[4]: Nothing to be done for `iconvlist'.
223make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/utils'
224make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/utils'
225make[5]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/utils/src'
226make[6]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/utils/src'
227make[6]: `Makedeps' is up to date.
228make[6]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/utils/src'
229make[6]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/utils/src'
230../../../../library/utils/libs/utils.so is unchanged
231make[6]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/utils/src'
232make[5]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/utils/src'
233make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/utils'
234make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/utils'
235make[4]: Nothing to be done for `mklazycomp'.
236make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/utils'
237make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/utils'
238make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/grDevices'
239building package 'grDevices'
240make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/grDevices'
241all.R is unchanged
242make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/grDevices'
243make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/grDevices'
244make[5]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/grDevices/src'
245/opt/local/bin/gcc-mp-4.5 -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/extra/zlib -I/opt/local/include    -fPIC  -O2 -DOS_OBJECT_USE_OBJC=0 -m64  -c devQuartz.c -o devQuartz.o
246/opt/local/bin/gcc-mp-4.5 -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/extra/zlib -I/opt/local/include    -fPIC  -O2 -DOS_OBJECT_USE_OBJC=0 -m64  -c qdBitmap.c -o qdBitmap.o
247In file included from /System/Library/Frameworks/CoreFoundation.framework/Headers/CoreFoundation.h:43:0,
248                 from /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/CarbonCore.h:20,
249                 from /System/Library/Frameworks/CoreServices.framework/Frameworks/AE.framework/Headers/AE.h:20,
250                 from /System/Library/Frameworks/CoreServices.framework/Headers/CoreServices.h:21,
251                 from /System/Library/Frameworks/ApplicationServices.framework/Headers/ApplicationServices.h:20,
252                 from ../../../../include/R_ext/QuartzDevice.h:101,
253                 from qdBitmap.h:24,
254                 from qdBitmap.c:27:
255/System/Library/Frameworks/CoreFoundation.framework/Headers/CFBundle.h:147:1: error: format string argument not a string type
256In file included from /System/Library/Frameworks/CoreFoundation.framework/Headers/CoreFoundation.h:43:0,
257                 from /System/Library/Frameworks/CoreServices.framework/Frameworks/CarbonCore.framework/Headers/CarbonCore.h:20,
258                 from /System/Library/Frameworks/CoreServices.framework/Frameworks/AE.framework/Headers/AE.h:20,
259                 from /System/Library/Frameworks/CoreServices.framework/Headers/CoreServices.h:21,
260                 from /System/Library/Frameworks/ApplicationServices.framework/Headers/ApplicationServices.h:20,
261                 from ../../../../include/R_ext/QuartzDevice.h:101,
262                 from devQuartz.c:36:
263/System/Library/Frameworks/CoreFoundation.framework/Headers/CFBundle.h:147:1: error: format string argument not a string type
264devQuartz.c: In function 'RQuartz_Font':
265devQuartz.c:715:5: warning: 'CGFontCreateWithPlatformFont' is deprecated (declared at /System/Library/Frameworks/ApplicationServices.framework/Frameworks/CoreGraphics.framework/Headers/CGFont.h:59)
266make[5]: *** [qdBitmap.o] Error 1
267make[5]: *** Waiting for unfinished jobs....
268make[5]: *** [devQuartz.o] Error 1
269make[5]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/grDevices/src'
270make[4]: *** [mksrc] Error 1
271make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/grDevices'
272make[3]: *** [all] Error 2
273make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library/grDevices'
274make[2]: *** [R] Error 1
275make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src/library'
276make[1]: *** [R] Error 1
277make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1/src'
278make: *** [R] Error 1
279make: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1'
280Command failed:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/work/R-3.0.1" && /usr/bin/make -j2 -w all
281Exit code: 2
282Error: org.macports.build for port R returned: command execution failed
283Warning: targets not executed for R: org.macports.install org.macports.build org.macports.destroot
284Please see the log file for port R for details:
285    /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_R/R/main.log
286Error: Unable to upgrade port: 1
287To report a bug, follow the instructions in the guide:
288    http://guide.macports.org/#project.tickets