#33289 closed update (fixed)
pymol: update to 1.5
| Reported by: | howarth@… | Owned by: | macports-tickets@… |
|---|---|---|---|
| Priority: | Normal | Milestone: | |
| Component: | ports | Version: | |
| Keywords: | haspatch maintainer | Cc: | nerdling (Jeremy Lavergne) |
| Port: | pymol |
Description (last modified by ryandesign (Ryan Carsten Schmidt))
Update pymol to the new 1.5 release from the pymol svn.
Implement use of configure.compiler for variants as requested.
Remove explicit usage of clang as it is now the default for macports 2.0.3 on :Lion.
Note that upstream no longer supports 'setup.py build' and requests
that 'setup.py install' be used instead, hence the empty build phase.
Also note that my patches to setup.py for fink/macports has been accepted
upstream so that the setup_py.diff patch is now much reduced in size.
Attachments (5)
Change History (10)
Changed 12 years ago by howarth@…
| Attachment: | setup_py.diff added |
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comment:1 follow-up: 2 Changed 12 years ago by ryandesign (Ryan Carsten Schmidt)
| Description: | modified (diff) |
|---|---|
| Keywords: | haspatch maintainer added; science removed |
| Milestone: | MacPorts 2.0.4 |
| Summary: | update pymol to → pymol: update to 1.5 |
clang is not the default on Lion; clang is the default on Xcode 4.2 and later, regardless of OS.
comment:2 Changed 12 years ago by howarth@…
Replying to ryandesign@…:
clang is not the default on Lion; clang is the default on Xcode 4.2 and later, regardless of OS.
Close enough as anyone with Xcode 4 can upgrade to 4.2.
Changed 12 years ago by howarth@…
| Attachment: | Portfile.diff added |
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updated Portfile.diff to include apbs-psize.py and pmw_tk fixes
Changed 12 years ago by howarth@…
| Attachment: | pymol_shell.diff added |
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apbs-psize.py can be found without setting enviromentals
Changed 12 years ago by howarth@…
| Attachment: | pmg_tk_platform.patch added |
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allow darwin to use same X11 wm fixes for pmw as linux2
Changed 12 years ago by howarth@…
| Attachment: | apbs-psize.patch added |
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correct filename used for psize.py to apbs-psize.py
comment:3 Changed 12 years ago by howarth@…
Added fixes so APBS-Tools extension can properly find the apbs-psize.py from our apbs package.
Also allow darwin to use the same pmw-tk fixes for X11 window managers as linux.
comment:4 Changed 12 years ago by nerdling (Jeremy Lavergne)
| Cc: | snc@… added |
|---|---|
| Resolution: | → fixed |
| Status: | new → closed |
| Version: | 2.0.3 |
Committed in r90200.
revised setup_py.diff patch for pymol-1.5