Opened 11 years ago
Closed 11 years ago
#37070 closed defect (fixed)
Octave-devel cannot activate hdf5 with mpich2
| Reported by: | numaryu | Owned by: | michaelld (Michael Dickens) |
|---|---|---|---|
| Priority: | Normal | Milestone: | |
| Component: | ports | Version: | 2.1.2 |
| Keywords: | Cc: | eborisch (Eric A. Borisch) | |
| Port: | octave-devel mpich2 |
Description
Octave-devel automatically deactivates hdf5 with WARNING saying HDF5 library not found when hdf5 is installed with +mpich2. The problem occurs because a compiler cannot find mpi.h, mpio.h on which (parallel) hdf5 library depends. mpi.h and mpio.h are not installed in the default search path, but in /opt/local/include/mpich2/.
I'm not sure what is the best way to resolve this problem. Maybe octave-devel port can avoid this problem by giving the -I/opt/local/include/mpich2 flag somewhere. Or, mpich2 port may change the place to install include files.
The same problem should also happen to octave port.
Attachments (1)
Change History (5)
Changed 11 years ago by numaryu
comment:1 Changed 11 years ago by jmroot (Joshua Root)
| Cc: | eborisch@… added |
|---|---|
| Owner: | changed from macports-tickets@… to michaelld@… |
comment:2 follow-up: 3 Changed 11 years ago by eborisch (Eric A. Borisch)
I had moved the mpich2 includes in order to try to facilitate cohabitation with OpenMPI. (It doesn't currently work due to a man page collision; there's a ticket somewhere about that.
Perhaps no one really ever wants OpenMPI and mpich2 (soon to be mpich (v3.0), but that's another discussion) active at the same time.
I have moved the includes back to the default in r99921. See if that fixes things for you.
comment:3 Changed 11 years ago by numaryu
I have moved the includes back to the default in r99921. See if that fixes things for you.
It works fine for me. thanks,
comment:4 Changed 11 years ago by michaelld (Michael Dickens)
| Resolution: | → fixed |
|---|---|
| Status: | new → closed |
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