SuiteSparse @4.2.1_3+atlas: Undefined symbols _dgemm_ _dgemv_ _dger_ _dlarf_ _dlarfb_ _dlarfg_ _dlarft_ _dnrm2_ _dpotrf_ _dsyrk_ _dtrsm_ _dtrsv_ _dznrm2_ _zgemm_ _zgemv_ _zherk_ _zlarf_ _zlarfb_ _zlarfg_ _zlarft_ _zpotrf_ _ztrsm_ _ztrsv_

[aarakes@…]

OS 10.9.5
Xcode 6.1
Build version 6A1052d

Here is where the error occurred from the log file.

:info:destroot       _cholmod_super_lsolve in cholmod_super_solve.o
:info:destroot       _cholmod_super_ltsolve in cholmod_super_solve.o
:info:destroot   "_ztrsv_", referenced from:
:info:destroot       _cholmod_l_super_lsolve in cholmod_l_super_solve.o
:info:destroot       _cholmod_l_super_ltsolve in cholmod_l_super_solve.o
:info:destroot       _cholmod_super_lsolve in cholmod_super_solve.o
:info:destroot       _cholmod_super_ltsolve in cholmod_super_solve.o
:info:destroot ld: symbol(s) not found for architecture x86_64
:info:destroot clang: error: linker command failed with exit code 1 (use -v to see invocation)
:info:destroot Command failed:  /usr/bin/clang++ -Wall -Os -arch x86_64  -dynamiclib -Wl,-all_load -L/opt/local/lib -ltatlas   ../../SuiteSparse_config/libsuitesparseconfig.4.2.1.dylib  ../../AMD/Lib/libamd.2.4.0.dylib  ../../CAMD/Lib/libcamd.2.4.0.dylib  ../../COLAMD/Lib/libcolamd.2.9.0.dylib  ../../CCOLAMD/Lib/libccolamd.2.9.0.dylib  -o libcholmod.3.0.0.dylib  -compatibility_version  3  -current_version 3.0.0  -install_name /opt/local/lib/libcholmod.3.0.0.dylib  *.o
:info:destroot Exit code: 1
:error:destroot org.macports.destroot for port SuiteSparse returned: command execution failed
:debug:destroot Error code: NONE
:debug:destroot Backtrace: command execution failed
    while executing
"proc-post-org.macports.destroot-destroot-0 org.macports.destroot"
    ("eval" body line 1)
    invoked from within
"eval $post $targetname"
:info:destroot Warning: targets not executed for SuiteSparse: org.macports.activate org.macports.destroot org.macports.install
:error:destroot Failed to install SuiteSparse
:debug:destroot Registry error: netpbm not registered as installed & active.
    invoked from within
"registry_active $subport"
    invoked from within
"$workername eval registry_active \$subport"
:notice:destroot Please see the log file for port SuiteSparse for details:
    /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_SuiteSparse/SuiteSparse/main.log

[ryandesign (Ryan Carsten Schmidt)]

Duplicate of #39072.