Opened 2 years ago

Closed 4 months ago

#56436 closed defect (fixed)

julia fails to build on snowleopard, the linker fails "ld: library not found for -lssp"

Reported by: chrisjogorman Owned by: essandess (Steve Smith)
Priority: Normal Milestone:
Component: ports Version: 2.4.3
Keywords: Cc:
Port: julia

Description

Hello,

I am trying to get julia installed on a snowleopard machine. Just tried to run port -v install julia. The build runs a bit then fails trying to find a library that I haven't heard of, nor can I find anything on google about it. The following is the build log.

Chris-Gormans-Mac-mini:~ chrisgorman$ sudo port -v clean julia
--->  Cleaning julia
--->  Removing work directory for julia
Chris-Gormans-Mac-mini:~ chrisgorman$ sudo port -v install julia
--->  Computing dependencies for julia.
--->  Fetching distfiles for julia
--->  Verifying checksums for julia
--->  Checksumming julia-0.6.2-full.tar.gz
--->  Extracting julia
--->  Extracting julia-0.6.2-full.tar.gz
Executing:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work" && /usr/bin/gzip -dc '/opt/local/var/macports/distfiles/julia/julia-0.6.2-full.tar.gz' | /usr/bin/gnutar --no-same-owner -xf - 
--->  Configuring julia
--->  Building julia
--->  Staging julia into destroot
. changed
	gid expected 0 found 80 modified
./usr missing (created)
. missing (directory not created: File exists)
./Applications missing (created)
./Developer missing (created)
./Library missing (created)
. changed
	gid expected 80 found 0 modified
./bin missing (created)
./etc missing (created)
./include missing (created)
./lib missing (created)
./lib/pkgconfig missing (created)
./libexec missing (created)
./sbin missing (created)
./share missing (created)
./share/doc missing (created)
./share/info missing (created)
./share/man missing (created)
./share/man/cat1 missing (created)
./share/man/cat2 missing (created)
./share/man/cat3 missing (created)
./share/man/cat4 missing (created)
./share/man/cat5 missing (created)
./share/man/cat6 missing (created)
./share/man/cat7 missing (created)
./share/man/cat8 missing (created)
./share/man/cat9 missing (created)
./share/man/catl missing (created)
./share/man/catn missing (created)
./share/man/man1 missing (created)
./share/man/man2 missing (created)
./share/man/man3 missing (created)
./share/man/man4 missing (created)
./share/man/man5 missing (created)
./share/man/man6 missing (created)
./share/man/man7 missing (created)
./share/man/man8 missing (created)
./share/man/man9 missing (created)
./share/man/manl missing (created)
./share/man/mann missing (created)
./share/nls missing (created)
./share/nls/C missing (created)
./share/nls/af_ZA.ISO8859-1 missing (created)
./share/nls/af_ZA.ISO8859-15 missing (created)
./share/nls/bg_BG.CP1251 missing (created)
./share/nls/cs_CZ.ISO8859-2 missing (created)
./share/nls/da_DK.ISO8859-1 missing (created)
./share/nls/da_DK.ISO8859-15 missing (created)
./share/nls/de_AT.ISO8859-1 missing (created)
./share/nls/de_AT.ISO8859-15 missing (created)
./share/nls/de_CH.ISO8859-1 missing (created)
./share/nls/de_CH.ISO8859-15 missing (created)
./share/nls/de_DE.ISO8859-1 missing (created)
./share/nls/de_DE.ISO8859-15 missing (created)
./share/nls/el_GR.ISO8859-7 missing (created)
./share/nls/en_AU.ISO8859-1 missing (created)
./share/nls/en_AU.ISO8859-15 missing (created)
./share/nls/en_AU.US-ASCII missing (created)
./share/nls/en_CA.ISO8859-1 missing (created)
./share/nls/en_CA.ISO8859-15 missing (created)
./share/nls/en_CA.US-ASCII missing (created)
./share/nls/en_GB.ISO8859-1 missing (created)
./share/nls/en_GB.ISO8859-15 missing (created)
./share/nls/en_GB.US-ASCII missing (created)
./share/nls/en_NZ.ISO8859-1 missing (created)
./share/nls/en_NZ.ISO8859-15 missing (created)
./share/nls/en_NZ.US-ASCII missing (created)
./share/nls/en_US.ISO8859-1 missing (created)
./share/nls/en_US.ISO8859-15 missing (created)
./share/nls/es_ES.ISO8859-1 missing (created)
./share/nls/es_ES.ISO8859-15 missing (created)
./share/nls/et_EE.ISO8859-15 missing (created)
./share/nls/fi_FI.ISO8859-1 missing (created)
./share/nls/fi_FI.ISO8859-15 missing (created)
./share/nls/fr_BE.ISO8859-1 missing (created)
./share/nls/fr_BE.ISO8859-15 missing (created)
./share/nls/fr_CA.ISO8859-1 missing (created)
./share/nls/fr_CA.ISO8859-15 missing (created)
./share/nls/fr_CH.ISO8859-1 missing (created)
./share/nls/fr_CH.ISO8859-15 missing (created)
./share/nls/fr_FR.ISO8859-1 missing (created)
./share/nls/fr_FR.ISO8859-15 missing (created)
./share/nls/hi_IN.ISCII-DEV missing (created)
./share/nls/hr_HR.ISO8859-2 missing (created)
./share/nls/hu_HU.ISO8859-2 missing (created)
./share/nls/is_IS.ISO8859-1 missing (created)
./share/nls/is_IS.ISO8859-15 missing (created)
./share/nls/it_CH.ISO8859-1 missing (created)
./share/nls/it_CH.ISO8859-15 missing (created)
./share/nls/it_IT.ISO8859-1 missing (created)
./share/nls/it_IT.ISO8859-15 missing (created)
./share/nls/ja_JP.SJIS missing (created)
./share/nls/ja_JP.eucJP missing (created)
./share/nls/ko_KR.eucKR missing (created)
./share/nls/la_LN.ISO8859-1 missing (created)
./share/nls/la_LN.ISO8859-15 missing (created)
./share/nls/la_LN.ISO8859-2 missing (created)
./share/nls/la_LN.ISO8859-4 missing (created)
./share/nls/la_LN.US-ASCII missing (created)
./share/nls/lt_LT.ISO8859-4 missing (created)
./share/nls/nl_BE.ISO8859-1 missing (created)
./share/nls/nl_BE.ISO8859-15 missing (created)
./share/nls/nl_NL.ISO8859-1 missing (created)
./share/nls/nl_NL.ISO8859-15 missing (created)
./share/nls/no_NO.ISO8859-1 missing (created)
./share/nls/no_NO.ISO8859-15 missing (created)
./share/nls/pl_PL.ISO8859-2 missing (created)
./share/nls/pt_BR.ISO8859-1 missing (created)
./share/nls/pt_PT.ISO8859-1 missing (created)
./share/nls/pt_PT.ISO8859-15 missing (created)
./share/nls/ro_RO.ISO8859-2 missing (created)
./share/nls/ru_RU.CP866 missing (created)
./share/nls/ru_RU.ISO8859-5 missing (created)
./share/nls/ru_RU.KOI8-R missing (created)
./share/nls/sk_SK.ISO8859-2 missing (created)
./share/nls/sl_SI.ISO8859-2 missing (created)
./share/nls/sv_SE.ISO8859-1 missing (created)
./share/nls/sv_SE.ISO8859-15 missing (created)
./share/nls/tr_TR.ISO8859-9 missing (created)
./share/nls/uk_UA.ISO8859-5 missing (created)
./share/nls/uk_UA.KOI8-U missing (created)
./share/nls/zh_CN.eucCN missing (created)
./share/nls/zh_TW.Big5 missing (created)
./share/skel missing (created)
./var missing (created)
./var/cache missing (created)
./var/db missing (created)
./var/log missing (created)
./var/run missing (created)
./var/spool missing (created)
./www missing (created)
Executing:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2" && /usr/bin/make -w install CC=/opt/local/bin/clang-mp-3.9 CXX=/opt/local/bin/clang++-mp-3.9 FC=/opt/local/bin/gfortran-mp-7 USE_SYSTEM_LLVM=1 LLVM_CONFIG=llvm-config-mp-4.0 USE_SYSTEM_LIBUNWIND=1 USE_SYSTEM_LIBM=1 USE_SYSTEM_GMP=1 USE_SYSTEM_MPFR=1 USE_SYSTEM_ZLIB=1 USE_SYSTEM_PCRE=1 USE_SYSTEM_FFTW=1 USE_SYSTEM_ARPACK=1 USE_SYSTEM_SUITESPARSE=1 USE_SYSTEM_LIBGIT2=1 USE_SYSTEM_BLAS=1 USE_SYSTEM_LAPACK=1 USE_BLAS64=0 LIBBLAS=-lopenblas LIBBLASNAME=libopenblas LIBLAPACK=-lopenblas LIBLAPACKNAME=libopenblas DESTDIR=/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/destroot 
Warning: git information unavailable; versioning information limited
make: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2'
    CC usr/tools/stringreplace
Warning: git information unavailable; versioning information limited
make[1]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2'
Warning: git information unavailable; versioning information limited
make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/deps'
rm: /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/deps/srccache/libuv-d8ab1c6a33e77bf155facb54215dd8798e13825d/: No such file or directory
checking for a BSD-compatible install... /opt/local/bin/ginstall -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /opt/local/bin/gmkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking build system type... x86_64-apple-darwin10.8.0
checking host system type... x86_64-apple-darwin10.8.0
checking for gcc... /opt/local/bin/clang-mp-3.9 
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether /opt/local/bin/clang-mp-3.9  accepts -g... yes
checking for /opt/local/bin/clang-mp-3.9  option to accept ISO C89... none needed
checking whether /opt/local/bin/clang-mp-3.9  understands -c and -o together... yes
checking for style of include used by make... GNU
checking dependency style of /opt/local/bin/clang-mp-3.9 ... gcc3
checking if /opt/local/bin/clang-mp-3.9  supports -fvisibility=hidden flag... yes
checking if /opt/local/bin/clang-mp-3.9  supports -g flag... yes
checking if /opt/local/bin/clang-mp-3.9  supports -std=gnu89 flag... yes
checking if /opt/local/bin/clang-mp-3.9  supports -pedantic flag... yes
checking if /opt/local/bin/clang-mp-3.9  supports -Wall flag... yes
checking if /opt/local/bin/clang-mp-3.9  supports -Wextra flag... yes
checking if /opt/local/bin/clang-mp-3.9  supports -Wno-unused-parameter flag... yes
checking for ar... ar
checking the archiver (ar) interface... ar
checking how to print strings... printf
checking for a sed that does not truncate output... /opt/local/bin/gsed
checking for grep that handles long lines and -e... /opt/local/bin/grep
checking for egrep... /opt/local/bin/grep -E
checking for fgrep... /opt/local/bin/grep -F
checking for ld used by /opt/local/bin/clang-mp-3.9 ... /opt/local/libexec/llvm-3.9/bin/ld
checking if the linker (/opt/local/libexec/llvm-3.9/bin/ld) is GNU ld... no
checking for BSD- or MS-compatible name lister (nm)... /opt/local/bin/nm -B
checking the name lister (/opt/local/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 196608
checking how to convert x86_64-apple-darwin10.8.0 file names to x86_64-apple-darwin10.8.0 format... func_convert_file_noop
checking how to convert x86_64-apple-darwin10.8.0 file names to toolchain format... func_convert_file_noop
checking for /opt/local/libexec/llvm-3.9/bin/ld option to reload object files... -r
checking for objdump... no
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for archiver @FILE support... no
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /opt/local/bin/nm -B output from /opt/local/bin/clang-mp-3.9  object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for mt... no
checking if : is a manifest tool... no
checking for dsymutil... dsymutil
checking for nmedit... nmedit
checking for lipo... lipo
checking for otool... otool
checking for otool64... no
checking for -single_module linker flag... yes
checking for -exported_symbols_list linker flag... yes
checking for -force_load linker flag... yes
checking how to run the C preprocessor... /opt/local/bin/clang-mp-3.9  -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if /opt/local/bin/clang-mp-3.9  supports -fno-rtti -fno-exceptions... yes
checking for /opt/local/bin/clang-mp-3.9  option to produce PIC... -fno-common -DPIC
checking if /opt/local/bin/clang-mp-3.9  PIC flag -fno-common -DPIC works... yes
checking if /opt/local/bin/clang-mp-3.9  static flag -static works... no
checking if /opt/local/bin/clang-mp-3.9  supports -c -o file.o... yes
checking if /opt/local/bin/clang-mp-3.9  supports -c -o file.o... (cached) yes
checking whether the /opt/local/bin/clang-mp-3.9  linker (/opt/local/libexec/llvm-3.9/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... darwin10.8.0 dyld
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking whether make supports nested variables... (cached) yes
checking for dlopen in -ldl... yes
checking for kstat_lookup in -lkstat... no
checking for kvm_open in -lkvm... no
checking for gethostbyname in -lnsl... no
checking for perfstat_cpu in -lperfstat... no
checking for pthread_mutex_init in -lpthread... yes
checking for clock_gettime in -lrt... no
checking for sendfile in -lsendfile... no
checking for socket in -lsocket... no
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... no
checking sys/ahafs_evProds.h usability... no
checking sys/ahafs_evProds.h presence... no
checking for sys/ahafs_evProds.h... no
checking for pkg-config... yes
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating libuv.pc
config.status: creating Makefile
config.status: executing depfiles commands
config.status: executing libtool commands
make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/deps/scratch/libuv-d8ab1c6a33e77bf155facb54215dd8798e13825d'
  CC       src/libuv_la-fs-poll.lo
  CC       src/libuv_la-inet.lo
  CC       src/libuv_la-threadpool.lo
  CC       src/libuv_la-uv-common.lo
/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/deps/srccache/libuv-d8ab1c6a33e77bf155facb54215dd8798e13825d/src/uv-common.c:664:16: warning: passing an object that undergoes default argument promotion to 'va_start' has undefined behavior [-Wvarargs]
  va_start(ap, option);
               ^
/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/deps/srccache/libuv-d8ab1c6a33e77bf155facb54215dd8798e13825d/src/uv-common.c:660:55: note: parameter of type 'uv_loop_option' is declared here
int uv_loop_configure(uv_loop_t* loop, uv_loop_option option, ...) {
                                                      ^
1 warning generated.
  CC       src/libuv_la-version.lo
  CC       src/unix/libuv_la-async.lo
  CC       src/unix/libuv_la-core.lo
  CC       src/unix/libuv_la-dl.lo
  CC       src/unix/libuv_la-fs.lo
  CC       src/unix/libuv_la-getaddrinfo.lo
  CC       src/unix/libuv_la-getnameinfo.lo
  CC       src/unix/libuv_la-loop-watcher.lo
  CC       src/unix/libuv_la-loop.lo
  CC       src/unix/libuv_la-pipe.lo
  CC       src/unix/libuv_la-poll.lo
  CC       src/unix/libuv_la-process.lo
  CC       src/unix/libuv_la-signal.lo
  CC       src/unix/libuv_la-stream.lo
  CC       src/unix/libuv_la-tcp.lo
  CC       src/unix/libuv_la-thread.lo
  CC       src/unix/libuv_la-timer.lo
  CC       src/unix/libuv_la-tty.lo
  CC       src/unix/libuv_la-udp.lo
  CC       src/unix/libuv_la-darwin.lo
  CC       src/unix/libuv_la-darwin-proctitle.lo
  CC       src/unix/libuv_la-fsevents.lo
  CC       src/unix/libuv_la-kqueue.lo
  CC       src/unix/libuv_la-proctitle.lo
  CCLD     libuv.la
make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/deps/scratch/libuv-d8ab1c6a33e77bf155facb54215dd8798e13825d'
make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/deps/scratch/libuv-d8ab1c6a33e77bf155facb54215dd8798e13825d'
make[4]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/deps/scratch/libuv-d8ab1c6a33e77bf155facb54215dd8798e13825d'
 /opt/local/bin/gmkdir -p '/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/usr-staging/libuv-d8ab1c6a33e77bf155facb54215dd8798e13825d/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/usr/lib'
 /bin/sh ./libtool   --mode=install /opt/local/bin/ginstall -c   libuv.la '/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/usr-staging/libuv-d8ab1c6a33e77bf155facb54215dd8798e13825d/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/usr/lib'
libtool: install: /opt/local/bin/ginstall -c .libs/libuv.1.dylib /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/usr-staging/libuv-d8ab1c6a33e77bf155facb54215dd8798e13825d/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/usr/lib/libuv.1.dylib
libtool: install: (cd /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/usr-staging/libuv-d8ab1c6a33e77bf155facb54215dd8798e13825d/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/usr/lib && { ln -s -f libuv.1.dylib libuv.dylib || { rm -f libuv.dylib && ln -s libuv.1.dylib libuv.dylib; }; })
libtool: install: /opt/local/bin/ginstall -c .libs/libuv.lai /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/usr-staging/libuv-d8ab1c6a33e77bf155facb54215dd8798e13825d/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/usr/lib/libuv.la
libtool: install: /opt/local/bin/ginstall -c .libs/libuv.a /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/usr-staging/libuv-d8ab1c6a33e77bf155facb54215dd8798e13825d/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/usr/lib/libuv.a
libtool: install: chmod 644 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/usr-staging/libuv-d8ab1c6a33e77bf155facb54215dd8798e13825d/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/usr/lib/libuv.a
libtool: install: ranlib /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/usr-staging/libuv-d8ab1c6a33e77bf155facb54215dd8798e13825d/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/usr/lib/libuv.a
libtool: warning: remember to run 'libtool --finish /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/usr/lib'
 /opt/local/bin/gmkdir -p '/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/usr-staging/libuv-d8ab1c6a33e77bf155facb54215dd8798e13825d/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/usr/include'
 /opt/local/bin/ginstall -c -m 644 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/deps/srccache/libuv-d8ab1c6a33e77bf155facb54215dd8798e13825d/include/uv.h /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/deps/srccache/libuv-d8ab1c6a33e77bf155facb54215dd8798e13825d/include/uv-errno.h /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/deps/srccache/libuv-d8ab1c6a33e77bf155facb54215dd8798e13825d/include/uv-threadpool.h /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/deps/srccache/libuv-d8ab1c6a33e77bf155facb54215dd8798e13825d/include/uv-version.h /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/deps/srccache/libuv-d8ab1c6a33e77bf155facb54215dd8798e13825d/include/uv-unix.h /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/deps/srccache/libuv-d8ab1c6a33e77bf155facb54215dd8798e13825d/include/uv-darwin.h '/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/usr-staging/libuv-d8ab1c6a33e77bf155facb54215dd8798e13825d/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/usr/include'
 /opt/local/bin/gmkdir -p '/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/usr-staging/libuv-d8ab1c6a33e77bf155facb54215dd8798e13825d/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/usr/lib/pkgconfig'
 /opt/local/bin/ginstall -c -m 644 libuv.pc '/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/usr-staging/libuv-d8ab1c6a33e77bf155facb54215dd8798e13825d/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/usr/lib/pkgconfig'
make[4]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/deps/scratch/libuv-d8ab1c6a33e77bf155facb54215dd8798e13825d'
make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/deps/scratch/libuv-d8ab1c6a33e77bf155facb54215dd8798e13825d'
rm: scratch/openspecfun-39699a1c1824bf88410cabb8a7438af91ea98f4c/: No such file or directory
make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/deps/scratch/openspecfun-39699a1c1824bf88410cabb8a7438af91ea98f4c'
make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/deps/scratch/openspecfun-39699a1c1824bf88410cabb8a7438af91ea98f4c'
make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/deps/scratch/openspecfun-39699a1c1824bf88410cabb8a7438af91ea98f4c'
make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/deps/scratch/openspecfun-39699a1c1824bf88410cabb8a7438af91ea98f4c'
rm: scratch/dsfmt-2.2.3/: No such file or directory
patching file dSFMT.h
Hunk #2 succeeded at 181 (offset 2 lines).
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Hunk #4 succeeded at 220 (offset 2 lines).
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Hunk #11 succeeded at 330 (offset 2 lines).
Hunk #12 succeeded at 341 (offset 2 lines).
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Hunk #14 succeeded at 376 (offset 2 lines).
Hunk #15 succeeded at 391 (offset 2 lines).
Hunk #16 succeeded at 407 (offset 2 lines).
Hunk #17 succeeded at 423 (offset 2 lines).
Hunk #18 succeeded at 439 (offset 2 lines).
Hunk #19 succeeded at 449 (offset 2 lines).
Hunk #20 succeeded at 459 (offset 2 lines).
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Hunk #22 succeeded at 483 (offset 2 lines).
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Hunk #24 succeeded at 511 (offset 2 lines).
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Hunk #33 succeeded at 605 (offset 2 lines).
Hunk #34 succeeded at 618 (offset 2 lines).
Hunk #35 succeeded at 630 (offset 2 lines).
patching file test.c
patching file dSFMT.c
clang: warning: argument unused during compilation: '--param max-inline-insns-single=1800'
rm: scratch/utf8proc-40e605959eb5cb90b2587fa88e3b661558fbc55a/: No such file or directory
make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/deps/scratch/utf8proc-40e605959eb5cb90b2587fa88e3b661558fbc55a'
ar: creating archive libutf8proc.a
make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/deps/scratch/utf8proc-40e605959eb5cb90b2587fa88e3b661558fbc55a'
make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/deps'
Warning: git information unavailable; versioning information limited
make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/src'
Warning: git information unavailable; versioning information limited
make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/src/support'
    CC src/support/hashing.o
clang: warning: optimization flag '-falign-functions' is not supported
    CC src/support/timefuncs.o
clang: warning: optimization flag '-falign-functions' is not supported
    CC src/support/ptrhash.o
clang: warning: optimization flag '-falign-functions' is not supported
    CC src/support/operators.o
clang: warning: optimization flag '-falign-functions' is not supported
    CC src/support/utf8.o
clang: warning: optimization flag '-falign-functions' is not supported
    CC src/support/ios.o
clang: warning: optimization flag '-falign-functions' is not supported
    CC src/support/htable.o
clang: warning: optimization flag '-falign-functions' is not supported
    CC src/support/bitvector.o
clang: warning: optimization flag '-falign-functions' is not supported
    CC src/support/int2str.o
clang: warning: optimization flag '-falign-functions' is not supported
    CC src/support/libsupportinit.o
clang: warning: optimization flag '-falign-functions' is not supported
    CC src/support/arraylist.o
clang: warning: optimization flag '-falign-functions' is not supported
    CC src/support/strtod.o
clang: warning: optimization flag '-falign-functions' is not supported
    CC src/support/crc32c.o
clang: warning: optimization flag '-falign-functions' is not supported
    LINK src/support/libsupport.a
make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/src/support'
Warning: git information unavailable; versioning information limited
make[3]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/src/flisp'
    CC src/flisp/flisp.o
clang: warning: optimization flag '-falign-functions' is not supported
    CC src/flisp/builtins.o
clang: warning: optimization flag '-falign-functions' is not supported
    CC src/flisp/string.o
clang: warning: optimization flag '-falign-functions' is not supported
    CC src/flisp/equalhash.o
clang: warning: optimization flag '-falign-functions' is not supported
    CC src/flisp/table.o
clang: warning: optimization flag '-falign-functions' is not supported
    CC src/flisp/iostream.o
clang: warning: optimization flag '-falign-functions' is not supported
    CC src/flisp/julia_extensions.o
clang: warning: optimization flag '-falign-functions' is not supported
    LINK src/flisp/libflisp.a
    CC src/flisp/flmain.o
clang: warning: optimization flag '-falign-functions' is not supported
    LINK src/flisp/flisp
ld: library not found for -lssp
clang: error: linker command failed with exit code 1 (use -v to see invocation)
make[3]: *** [/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/src/flisp/flisp] Error 1
make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/src/flisp'
make[2]: *** [flisp/libflisp.a] Error 2
make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/src'
make[1]: *** [julia_flisp.boot.inc.phony] Error 2
make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2'
make: *** [install] Error 2
make: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2'
Command failed:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2" && /usr/bin/make -w install CC=/opt/local/bin/clang-mp-3.9 CXX=/opt/local/bin/clang++-mp-3.9 FC=/opt/local/bin/gfortran-mp-7 USE_SYSTEM_LLVM=1 LLVM_CONFIG=llvm-config-mp-4.0 USE_SYSTEM_LIBUNWIND=1 USE_SYSTEM_LIBM=1 USE_SYSTEM_GMP=1 USE_SYSTEM_MPFR=1 USE_SYSTEM_ZLIB=1 USE_SYSTEM_PCRE=1 USE_SYSTEM_FFTW=1 USE_SYSTEM_ARPACK=1 USE_SYSTEM_SUITESPARSE=1 USE_SYSTEM_LIBGIT2=1 USE_SYSTEM_BLAS=1 USE_SYSTEM_LAPACK=1 USE_BLAS64=0 LIBBLAS=-lopenblas LIBBLASNAME=libopenblas LIBLAPACK=-lopenblas LIBLAPACKNAME=libopenblas DESTDIR=/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/destroot 
Exit code: 2
Error: Failed to destroot julia: command execution failed
Error: See /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/main.log for details.
Error: Follow https://guide.macports.org/#project.tickets to report a bug.
Error: Processing of port julia failed

Attachments (2)

main.log.gz (11.6 KB) - added by chrisjogorman 2 years ago.
julia-main.log (99.3 KB) - added by chrisjohgorman (Chris Gorman) 14 months ago.

Download all attachments as: .zip

Change History (22)

Changed 2 years ago by chrisjogorman

Attachment: main.log.gz added

comment:1 Changed 2 years ago by kencu (Ken)

/opt/local/lib/gcc7/libssp.dylib is part of gcc7. There are similar libraries for other versions of gcc.

So -- as this port LOOKS like it is only c and not c++ -- you might get lucky and try this:

sudo port clean julia
sudo port -v install gcc7
sudo port -v install julia configure.compiler=macports-gcc7

comment:2 Changed 2 years ago by chrisjogorman

Unfortunately this works only a bit further along in the build. I believe this port should probably be built with clang as it uses llvm-4.0 itself as a jit. I wonder if I use the default apple fortran compiler if it will work? (Instead of using gfortran from gcc7.)

    LINK src/flisp/flisp
make[3]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/src/flisp'
    FLISP src/julia_flisp.boot
    FLISP src/julia_flisp.boot.inc
make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/src'
Warning: git information unavailable; versioning information limited
make[2]: Entering directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/src'
    CC src/jltypes.dbg.obj
    CC src/gf.dbg.obj
    CC src/typemap.dbg.obj
    CC src/ast.dbg.obj
    CC src/builtins.dbg.obj
    CC src/module.dbg.obj
    CC src/interpreter.dbg.obj
    CC src/symbol.dbg.obj
    CC src/dlload.dbg.obj
    CC src/sys.dbg.obj
    CC src/init.dbg.obj
    CC src/task.dbg.obj
    CC src/array.dbg.obj
    CC src/dump.dbg.obj
    CC src/toplevel.dbg.obj
    CC src/jl_uv.dbg.obj
    CC src/datatype.dbg.obj
    CC src/simplevector.dbg.obj
    CC src/APInt-C.dbg.obj
g++-mp-7: error: unrecognized command line option '-stdlib=libc++'
g++-mp-7: error: unrecognized command line option '-Wcovered-switch-default'; did you mean '-Wno-switch-default'?
g++-mp-7: error: unrecognized command line option '-Wstring-conversion'; did you mean '-Wint-conversion'?
make[2]: *** [APInt-C.dbg.obj] Error 1
make[2]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2/src'
make[1]: *** [julia-src-debug] Error 2
make[1]: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2'
make: *** [install] Error 2
make: Leaving directory `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2'
Command failed:  cd "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/julia-0.6.2" && /usr/bin/make -w install CC=/opt/local/bin/gcc-mp-7 CXX=/opt/local/bin/g++-mp-7 FC=/opt/local/bin/gfortran-mp-7 USE_SYSTEM_LLVM=1 LLVM_CONFIG=llvm-config-mp-4.0 USE_SYSTEM_LIBUNWIND=1 USE_SYSTEM_LIBM=1 USE_SYSTEM_GMP=1 USE_SYSTEM_MPFR=1 USE_SYSTEM_ZLIB=1 USE_SYSTEM_PCRE=1 USE_SYSTEM_FFTW=1 USE_SYSTEM_ARPACK=1 USE_SYSTEM_SUITESPARSE=1 USE_SYSTEM_LIBGIT2=1 USE_SYSTEM_BLAS=1 USE_SYSTEM_LAPACK=1 USE_BLAS64=0 LIBBLAS=-lopenblas LIBBLASNAME=libopenblas LIBLAPACK=-lopenblas LIBLAPACKNAME=libopenblas DESTDIR=/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/work/destroot 
Exit code: 2
Error: Failed to destroot julia: command execution failed
Error: See /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_lang_julia/julia/main.log for details.
Error: Follow https://guide.macports.org/#project.tickets to report a bug.
Error: Processing of port julia failed

comment:3 Changed 2 years ago by mf2k (Frank Schima)

Cc: sean@… removed
Keywords: linker julia snowleopard -lssp removed
Owner: set to seanfarley
Status: newassigned

comment:4 in reply to:  2 Changed 2 years ago by ryandesign (Ryan Schmidt)

Replying to chrisjogorman:

I wonder if I use the default apple fortran compiler if it will work?

I don't think there is an Apple Fortran compiler. That's why we use gfortran to build Fortran software in MacPorts.

comment:5 Changed 2 years ago by chrisjogorman

Sorry the 'default apple fortran compiler' is gfortran 4.2.3. I believe it is too old to build julia properly, and have been trying with gfortran-mp-7. No luck so far.

comment:6 Changed 2 years ago by kencu (Ken)

You can get past your error with -lssp by specifying the library fully in Make.inc like this:

OSLIBS += -L/opt/local/lib/gcc7/libssp.dylib

but then it just errors out later with this:

    CC src/signal-handling.dbg.obj
In file included from /opt/local/var/macports/build/_opt_local_var_macports_sources_github.com_macports_macports-ports_lang_julia/julia/work/julia-0.6.2/src/signal-handling.c:94:
./signals-unix.c:39:43: error: expected expression
    return (bt_context_t*)&((ucontext64_t*)sigctx)->uc_mcontext64->__ss;
                                          ^

and more like it.

Last edited 2 years ago by kencu (Ken) (previous) (diff)

comment:7 in reply to:  5 ; Changed 2 years ago by ryandesign (Ryan Schmidt)

Replying to chrisjogorman:

Sorry the 'default apple fortran compiler' is gfortran 4.2.3.

Where is this on your computer? How did it get there? I didn't think Apple provided a Fortran compiler with Xcode.

comment:8 in reply to:  7 Changed 2 years ago by chrisjogorman

Where is this on your computer? How did it get there? I didn't think Apple provided a Fortran compiler with Xcode.

I believe I had to install gfortran 4.2.3 for building packages for R. You are correct it wasn't part of Xcode. Interestingly the package puts the binaries in /usr/local, rather than /usr. The .pkg file can be downloaded from http://r.research.att.com/tools/.

comment:9 Changed 2 years ago by kencu (Ken)

I tried this build on 10.13, and is succeeded without any problem. I tried it on snowleopard and it failed. I also tried

sudo port -v install +gcc7

(which is the default) and it failed as well. It's not obvious to me why it's failing at the moment.

comment:10 Changed 2 years ago by chrisjogorman

gcc7 failed for me initially because I was trying to build it with clang-3.9 and it failed to link. The linking fails because clang-3.9 doesn't add -stdlib=libc++ as it does on newer compilers. (See Ken's explanation to me in ticket:55410). I built gcc7 with the default c compiler from xcode 3.2.6 and it built. The other way to get around it is to rebuild llvm-3.9 with his patches https://github.com/kencu/SnowLeopardPorts/blob/master/lang/llvm-3.9/files/9999-patch-clang-3.9-Toolchains-default-always-libcxx.diff. If tackle building gcc7 with clang-3.9 you'll need his setup https://github.com/kencu/SnowLeopardPorts/tree/master/lang/llvm-3.9.

Last edited 4 months ago by ryandesign (Ryan Schmidt) (previous) (diff)

comment:11 in reply to:  10 Changed 2 years ago by chrisjogorman

Replying to chrisjogorman: Sorry Ken. I didn't look at who was writing the bug and clicked send just as I was reading your name. (You obviously know what I wrote about.)

comment:12 Changed 20 months ago by mf2k (Frank Schima)

Owner: seanfarley deleted

comment:13 Changed 14 months ago by ryandesign (Ryan Schmidt)

julia was updated to 1.1.1 and no longer uses llvm. Do you still encounter this problem with that version?

comment:14 Changed 14 months ago by chrisjohgorman (Chris Gorman)

I have a new error when trying to build. I've attached my main.log. There appears to be an environment problem now.

Changed 14 months ago by chrisjohgorman (Chris Gorman)

Attachment: julia-main.log added

comment:15 Changed 14 months ago by mf2k (Frank Schima)

Owner: set to essandess

comment:16 Changed 14 months ago by essandess (Steve Smith)

Apple Snow Leopard support ended over five years ago. 10.6 is insecure. I haven’t checked and would be amazed if the upstream package supports 10.6 builds.

The fix to all these issues is to stop using 10.6.

@mf2k would you please post the Portfile code that says that only macOS versions 10.12 (my guess) and later are supported and I’ll add it.

@chrisjohgorman all the Julia 1.1.1 Portfile does is implement the build commands that Julia says to do. In the off-chance you can actually build the latest Julia from a git clone directly, please post the how you did it and suggest what the missing step is.

comment:17 Changed 14 months ago by kencu (Ken)

We support older systems if it can be done, but portfile authors without legacy skills are not expected to do the work. In general, no outdated security is exposed by any MacPorts software. It’s all state of the art, even on Tiger.

comment:18 Changed 14 months ago by mf2k (Frank Schima)

Indeed and I am one without legacy skills. I would just look at other portfiles for guidance. Here is a code snippet that was just committed which checks Xcode version:

if {[vercmp $xcodeversion 5] >= 0 && [vercmp $xcodeversion 10.0] < 0} {
   ...
}

comment:19 Changed 14 months ago by mf2k (Frank Schima)

And looking at the guide, the variable for OS version is os.version

comment:20 Changed 4 months ago by ryandesign (Ryan Schmidt)

Resolution: fixed
Status: assignedclosed

In 0f6b16d21966e9d24cd9d0336314804d82d5a4bb/macports-ports (master):

julia: Prevent installation on 10.9 and earlier

Closes: #56436

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