opencv: @3.4.13: variant 'contrib' fails with link error, for module 'libopencv_sfm'

[mascguy (Christopher Nielsen)]

I'm seeing similar errors with this contrib module for opencv4 v4.5.1. However, opencv v3.4.12, as well as opencv4 v4.5.0 (I'm working on the latter), are both fine.

Some of the link errors appear to be related to Google GLog. I haven't tracked down the others yet.

As for workarounds, I tested with MacPorts clang-10, hoping it might be an issue with what's provided by Xcode. But that didn't help. I also verified that the configure scripts are properly finding GLog, and they are.

These failures were seen on MacOS 10.13 and Xcode 10.1. However, builds succeed on 10.12, 10.14, and 10.15.

Details:

:info:build Undefined symbols for architecture x86_64:
:info:build   "fLI::FLAGS_v", referenced from:
:info:build       libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >::Model libmv::Estimate<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > >(libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > const&, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > const&, libmv::vector<int, Eigen::aligned_allocator<int> >*, double*, double) in libmultiview.a(robust_fundamental.cc.o)
:info:build       libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >::Model libmv::Estimate<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > >(libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > const&, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > const&, libmv::vector<int, Eigen::aligned_allocator<int> >*, double*, double) in libmultiview.a(robust_fundamental.cc.o)
:info:build   "google::LogMessage::LogMessage(char const*, int)", referenced from:
:info:build       libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >::Model libmv::Estimate<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > >(libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > const&, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > const&, libmv::vector<int, Eigen::aligned_allocator<int> >*, double*, double) in libmultiview.a(robust_fundamental.cc.o)
:info:build       libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >::Model libmv::Estimate<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > >(libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > const&, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > const&, libmv::vector<int, Eigen::aligned_allocator<int> >*, double*, double) in libmultiview.a(robust_fundamental.cc.o)
:info:build   "google::LogMessageFatal::LogMessageFatal(char const*, int)", referenced from:
:info:build       libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >::Model libmv::Estimate<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > >(libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > const&, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > const&, libmv::vector<int, Eigen::aligned_allocator<int> >*, double*, double) in libmultiview.a(robust_fundamental.cc.o)
:info:build       libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >::Model libmv::Estimate<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > >(libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > const&, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > const&, libmv::vector<int, Eigen::aligned_allocator<int> >*, double*, double) in libmultiview.a(robust_fundamental.cc.o)
:info:build   "google::kLogSiteUninitialized", referenced from:
:info:build       libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >::Model libmv::Estimate<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > >(libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > const&, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > const&, libmv::vector<int, Eigen::aligned_allocator<int> >*, double*, double) in libmultiview.a(robust_fundamental.cc.o)
:info:build       libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >::Model libmv::Estimate<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > >(libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > const&, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > const&, libmv::vector<int, Eigen::aligned_allocator<int> >*, double*, double) in libmultiview.a(robust_fundamental.cc.o)
:info:build       libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >::Model libmv::Estimate<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > >(libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > const&, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > const&, libmv::vector<int, Eigen::aligned_allocator<int> >*, double*, double)::vlocal__ in libmultiview.a(robust_fundamental.cc.o)
:info:build       libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >::Model libmv::Estimate<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > >(libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > const&, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > const&, libmv::vector<int, Eigen::aligned_allocator<int> >*, double*, double)::vlocal__ in libmultiview.a(robust_fundamental.cc.o)
:info:build       libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >::Model libmv::Estimate<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > >(libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > const&, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > const&, libmv::vector<int, Eigen::aligned_allocator<int> >*, double*, double)::vlocal__ in libmultiview.a(robust_fundamental.cc.o)
:info:build       libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >::Model libmv::Estimate<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > >(libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > const&, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > const&, libmv::vector<int, Eigen::aligned_allocator<int> >*, double*, double)::vlocal__ in libmultiview.a(robust_fundamental.cc.o)
:info:build       libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >::Model libmv::Estimate<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > >(libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > const&, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > const&, libmv::vector<int, Eigen::aligned_allocator<int> >*, double*, double)::vlocal__ in libmultiview.a(robust_fundamental.cc.o)
:info:build       ...
:info:build   "google::InitVLOG3__(int**, int*, char const*, int)", referenced from:
:info:build       libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >::Model libmv::Estimate<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > >(libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > const&, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > const&, libmv::vector<int, Eigen::aligned_allocator<int> >*, double*, double) in libmultiview.a(robust_fundamental.cc.o)
:info:build       libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >::Model libmv::Estimate<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > >(libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > const&, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > const&, libmv::vector<int, Eigen::aligned_allocator<int> >*, double*, double) in libmultiview.a(robust_fundamental.cc.o)
:info:build   "google::LogMessage::stream()", referenced from:
:info:build       libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >::Model libmv::Estimate<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > >(libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > const&, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > const&, libmv::vector<int, Eigen::aligned_allocator<int> >*, double*, double) in libmultiview.a(robust_fundamental.cc.o)
:info:build       libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >::Model libmv::Estimate<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > >(libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > const&, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > const&, libmv::vector<int, Eigen::aligned_allocator<int> >*, double*, double) in libmultiview.a(robust_fundamental.cc.o)
:info:build   "google::LogMessageFatal::~LogMessageFatal()", referenced from:
:info:build       libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >::Model libmv::Estimate<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > >(libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > const&, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > const&, libmv::vector<int, Eigen::aligned_allocator<int> >*, double*, double) in libmultiview.a(robust_fundamental.cc.o)
:info:build       libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >::Model libmv::Estimate<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > >(libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > const&, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > const&, libmv::vector<int, Eigen::aligned_allocator<int> >*, double*, double) in libmultiview.a(robust_fundamental.cc.o)
:info:build   "google::LogMessage::~LogMessage()", referenced from:
:info:build       libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >::Model libmv::Estimate<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > >(libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > const&, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::EightPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > const&, libmv::vector<int, Eigen::aligned_allocator<int> >*, double*, double) in libmultiview.a(robust_fundamental.cc.o)
:info:build       libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >::Model libmv::Estimate<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> >, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > >(libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > const&, libmv::MLEScorer<libmv::two_view::kernel::Kernel<libmv::two_view::kernel::NormalizedSolver<libmv::fundamental::kernel::SevenPointSolver, libmv::UnnormalizerT>, libmv::fundamental::kernel::SampsonError, Eigen::Matrix<double, 3, 3, 0, 3, 3> > > const&, libmv::vector<int, Eigen::aligned_allocator<int> >*, double*, double) in libmultiview.a(robust_fundamental.cc.o)
:info:build ld: symbol(s) not found for architecture x86_64
:info:build clang: error: linker command failed with exit code 1 (use -v to see invocation)
:info:build make[2]: *** [lib/libopencv_sfm.3.4.13.dylib] Error 1
:info:build make[2]: Leaving directory `/opt/local/var/macports/build/_opt_macports_sources_ports_enabled_graphics_opencv/opencv/work/build'
:info:build make[1]: *** [modules/sfm/CMakeFiles/opencv_sfm.dir/all] Error 2

[mascguy (Christopher Nielsen)]

Full log for 10.13 attached.

[mascguy (Christopher Nielsen)]

Builds succeed on 10.12, 10.14, and 10.15. So it may be related to what contrib-related dependencies are -- and/or aren't -- installed. So I'll take this.

[erikbs]

I get the same error on 10.9 too; ver. 3.4.13, variants +avx2+contrib+eigen+python39+tbb.

System/compiler info:

:debug:sysinfo OS X 10.9 (darwin/13.4.0) arch i386
:debug:sysinfo MacPorts 2.6.4
:debug:sysinfo Xcode 6.2
:debug:sysinfo SDK 10.9
...
:debug:clean Sourcing PortGroup clang_dependency 1.0 from /opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/_resources/port1.0/group/clang_dependency-1.0.tcl
:debug:clean compiler clang 600.0.57 not blacklisted because it doesn't match {clang < 211.10.1}

Macports defaults to clang-mp-9.0, but I also tried clang-mp-10 without success.

Apparently the contrib module that fails to link is SFM (Structure From Motion). For some strange reason it find gflags, but not glog. Whatever the reason is, I managed to build it successfully by editing this file:

/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_graphics_opencv/opencv/work/build/modules/sfm/CMakeFiles/opencv_sfm.dir/link.txt

… where I added /opt/local/lib/libglog.0.4.0.dylib right after libgflags.2.2.2.dylib in the list of libraries to link against

When calling upgrade opencv again, Macports picks up where it failed and finishes successfully.

---

I suspect that the error lies in either of these files:

work/opencv_contrib-3.4.13/modules/sfm/CMakeLists.txt

work/opencv_contrib-3.4.13/modules/sfm/cmake/FindGlog.cmake

Unfortunately I am not sure how to debug these, but it seems like find_package(Glog QUIET) fails. In the first file I see this command:

set(LIBMV_LIGHT_LIBS
  correspondence
  multiview
  numeric
  ${GLOG_LIBRARIES}
  ${GFLAGS_LIBRARIES}
)

Judging by the contents of link.txt (full path above), which is:

/opt/local/bin/clang++-mp-10 -pipe -Os -DNDEBUG -isystem/opt/local/include -I/opt/local/include/LegacySupport -stdlib=libc++   -fsigned-char -W -Wall -Werror=return-type -Werror=non-virtual-dtor -Werror=address -Wformat -Werror=format-security -Wmissing-prototypes -Wstrict-prototypes -Winit-self -Wpointer-arith -Wsign-promo -Wuninitialized -Winconsistent-missing-override -Wno-delete-non-virtual-dtor -Wno-unnamed-type-template-args -Wno-comment -Wno-deprecated-enum-enum-conversion -Wno-deprecated-anon-enum-enum-conversion -fdiagnostics-show-option -Wno-long-long -Qunused-arguments -Wno-semicolon-before-method-body -ffunction-sections -fdata-sections  -msse4.1 -mpopcnt -msse4.2 -mf16c -mfma -mavx2 -fvisibility=hidden -fvisibility-inlines-hidden -Wno-undef -Wno-shadow -Wno-sign-compare -Wno-missing-declarations -Wno-unused-parameter -Wno-unused-function -arch x86_64 -mmacosx-version-min=10.9 -dynamiclib -Wl,-headerpad_max_install_names -L/opt/local/lib -Wl,-headerpad_max_install_names -lMacportsLegacySupport  -Wl,-dead_strip -compatibility_version 3.4.0 -current_version 3.4.13 -o ../../lib/libopencv_sfm.3.4.13.dylib -install_name @rpath/libopencv_sfm.3.4.dylib CMakeFiles/opencv_sfm.dir/src/conditioning.cpp.o CMakeFiles/opencv_sfm.dir/src/fundamental.cpp.o CMakeFiles/opencv_sfm.dir/src/io.cpp.o CMakeFiles/opencv_sfm.dir/src/numeric.cpp.o CMakeFiles/opencv_sfm.dir/src/projection.cpp.o CMakeFiles/opencv_sfm.dir/src/reconstruct.cpp.o CMakeFiles/opencv_sfm.dir/src/robust.cpp.o CMakeFiles/opencv_sfm.dir/src/simple_pipeline.cpp.o CMakeFiles/opencv_sfm.dir/src/triangulation.cpp.o  -Wl,-rpath,/opt/local/lib ../../lib/libopencv_imgcodecs.3.4.13.dylib ../../lib/libopencv_xfeatures2d.3.4.13.dylib ../../lib/libcorrespondence.a ../../lib/libmultiview.a ../../lib/libnumeric.a /opt/local/lib/libgflags.2.2.2.dylib ../../lib/libopencv_ml.3.4.13.dylib ../../lib/libopencv_shape.3.4.13.dylib ../../lib/libopencv_video.3.4.13.dylib ../../lib/libopencv_calib3d.3.4.13.dylib ../../lib/libopencv_features2d.3.4.13.dylib ../../lib/libopencv_flann.3.4.13.dylib ../../lib/libopencv_imgproc.3.4.13.dylib ../../lib/libopencv_core.3.4.13.dylib

… GLOG_LIBRARIES is not set, because the corresponding dylib is missing from the list (../../lib/libcorrespondence.a ../../lib/libmultiview.a ../../lib/libnumeric.a /opt/local/lib/libgflags.2.2.2.dylib, which I guess is generated from LIBMV_LIGHT_LIBS). libglog.0.4.0.dylib should have been in there too, between libnumeric.a and libgflags.2.2.2.dylib.

[mascguy (Christopher Nielsen)]

FYI, this issue is fixed with opencv/opencv3 3.4.14, and opencv4 4.5.2. Pull requests pending shortly.

[mascguy (Christopher Nielsen)]

Pull requests created:

opencv3 update: ​https://github.com/macports/macports-ports/pull/10767

opencv4 update: ​https://github.com/macports/macports-ports/pull/10768

[Christopher Nielsen <mascguy@…>]

In 4925e5bcf01f19c67cb27015829db9a2c8f6d488/macports-ports (master):

opencv3: update to 3.4.14; fix paths in pkgconfig
Fixes: #62462
Fixes: #61908